View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5053_high_29 (Length: 250)
Name: NF5053_high_29
Description: NF5053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5053_high_29 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 35678479 - 35678243
Alignment:
| Q |
14 |
ttctctacaattgcacttccctccacaaacctcacttccaaaccatccatcttaaacaacacttcacattctcacgcacttcgccatttctcaggtaata |
113 |
Q |
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| T |
35678479 |
ttctctacaattgcacttccctccacaaacgtcacttccaaactatccatcttaaacaacacttcacattctcacgcacttcgccatttctcaggtaata |
35678380 |
T |
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| Q |
114 |
ctactaaacgctttcataaagcttcctcctttattgcttttgctgtgaagaacaaccccaccataagaaaaaccactccaagaagagatagtagaaaccc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678379 |
ctactaaacgctttcataaagcttcctcctttattgcttttgctgtgaagaacaaccccaccataagaaaaaccactccaagaagagatagtagaaaccc |
35678280 |
T |
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| Q |
214 |
acttttaagtgaaggaagagacgaagatgaagctctt |
250 |
Q |
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||||||||||||||| ||||| ||||||||||||||| |
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| T |
35678279 |
acttttaagtgaaggtagagatgaagatgaagctctt |
35678243 |
T |
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