View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5053_low_41 (Length: 225)

Name: NF5053_low_41
Description: NF5053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5053_low_41
NF5053_low_41
[»] chr8 (48 HSPs)
chr8 (1-131)||(12670293-12670423)
chr8 (1-131)||(30454140-30454270)
chr8 (24-132)||(20869564-20869672)
chr8 (1-131)||(36720756-36720888)
chr8 (1-124)||(13160669-13160793)
chr8 (1-131)||(28817669-28817801)
chr8 (13-126)||(17823541-17823656)
chr8 (10-131)||(2626479-2626605)
chr8 (10-131)||(35261639-35261762)
chr8 (11-131)||(29521738-29521860)
chr8 (1-131)||(45071225-45071356)
chr8 (24-131)||(39461062-39461171)
chr8 (1-131)||(7136570-7136704)
chr8 (19-126)||(18164821-18164929)
chr8 (39-126)||(28407381-28407469)
chr8 (10-131)||(44530109-44530232)
chr8 (10-126)||(6760787-6760907)
chr8 (1-114)||(24365102-24365218)
chr8 (29-131)||(11748259-11748363)
chr8 (1-131)||(20284112-20284248)
chr8 (48-131)||(21070794-21070877)
chr8 (1-122)||(12625858-12625982)
chr8 (10-131)||(26954092-26954218)
chr8 (1-125)||(8897807-8897933)
chr8 (29-131)||(24245411-24245510)
chr8 (19-126)||(44781567-44781675)
chr8 (14-115)||(22598133-22598236)
chr8 (1-131)||(25250482-25250616)
chr8 (48-126)||(42083791-42083868)
chr8 (10-126)||(8483990-8484107)
chr8 (48-126)||(30962865-30962942)
chr8 (10-112)||(35105902-35106007)
chr8 (24-126)||(14018035-14018138)
chr8 (1-90)||(5135332-5135423)
chr8 (10-109)||(31457155-31457255)
chr8 (1-105)||(23000262-23000365)
chr8 (10-65)||(23286377-23286432)
chr8 (1-73)||(29877112-29877186)
chr8 (10-115)||(11001001-11001109)
chr8 (1-70)||(19729363-19729432)
chr8 (11-92)||(389642-389727)
chr8 (62-100)||(27635020-27635058)
chr8 (13-82)||(5689640-5689711)
chr8 (95-131)||(40605044-40605080)
chr8 (10-73)||(20869941-20870008)
chr8 (94-131)||(23286431-23286468)
chr8 (10-115)||(44742570-44742678)
chr8 (62-122)||(40607830-40607890)
[»] chr4 (75 HSPs)
chr4 (1-131)||(48598868-48598998)
chr4 (1-131)||(20224944-20225074)
chr4 (1-131)||(47528573-47528703)
chr4 (1-131)||(5648219-5648350)
chr4 (16-131)||(11054206-11054321)
chr4 (10-131)||(6430678-6430800)
chr4 (1-131)||(5306707-5306838)
chr4 (24-126)||(16408669-16408773)
chr4 (1-131)||(30639340-30639471)
chr4 (10-131)||(14590797-14590921)
chr4 (1-113)||(9832356-9832468)
chr4 (1-131)||(16911522-16911656)
chr4 (11-118)||(40915802-40915910)
chr4 (29-132)||(21646923-21647028)
chr4 (10-126)||(8473674-8473790)
chr4 (10-111)||(17043446-17043549)
chr4 (14-110)||(39077852-39077948)
chr4 (1-99)||(29207941-29208039)
chr4 (1-126)||(30496365-30496490)
chr4 (10-111)||(54175043-54175147)
chr4 (48-131)||(17315390-17315473)
chr4 (10-116)||(19027823-19027931)
chr4 (10-131)||(37494811-37494934)
chr4 (33-128)||(42164224-42164319)
chr4 (48-131)||(30352683-30352766)
chr4 (1-131)||(23501753-23501881)
chr4 (1-115)||(35567146-35567262)
chr4 (1-116)||(47443928-47444049)
chr4 (29-118)||(44363203-44363294)
chr4 (48-131)||(10660364-10660447)
chr4 (48-131)||(10874509-10874592)
chr4 (10-108)||(41018846-41018945)
chr4 (48-131)||(54730209-54730292)
chr4 (24-115)||(487201-487294)
chr4 (48-125)||(49938682-49938759)
chr4 (1-126)||(47441573-47441699)
chr4 (1-105)||(25463108-25463214)
chr4 (61-131)||(5313099-5313169)
chr4 (19-126)||(25343153-25343261)
chr4 (48-126)||(54640431-54640508)
chr4 (10-108)||(7385528-7385628)
chr4 (14-87)||(10277813-10277886)
chr4 (24-131)||(13256467-13256572)
chr4 (31-113)||(23580281-23580365)
chr4 (48-113)||(30690275-30690340)
chr4 (50-115)||(43035224-43035289)
chr4 (51-115)||(12257688-12257752)
chr4 (54-106)||(32629366-32629418)
chr4 (1-126)||(54966987-54967112)
chr4 (24-131)||(20405053-20405156)
chr4 (45-115)||(41549358-41549428)
chr4 (1-119)||(14983806-14983926)
chr4 (24-131)||(55766532-55766641)
chr4 (60-131)||(20373898-20373969)
chr4 (39-113)||(32478867-32478942)
chr4 (1-71)||(49796818-49796889)
chr4 (48-126)||(36589710-36589786)
chr4 (24-115)||(39029127-39029220)
chr4 (1-73)||(7909324-7909397)
chr4 (24-131)||(55830787-55830896)
chr4 (1-73)||(20639701-20639776)
chr4 (19-103)||(7038041-7038126)
chr4 (32-126)||(49938513-49938608)
chr4 (52-113)||(7227710-7227771)
chr4 (94-131)||(18969701-18969738)
chr4 (48-114)||(3580932-3580994)
chr4 (10-79)||(9987886-9987957)
chr4 (1-115)||(20908679-20908797)
chr4 (1-126)||(30581508-30581636)
chr4 (1-79)||(21489099-21489180)
chr4 (93-131)||(29879634-29879672)
chr4 (64-126)||(50856344-50856405)
chr4 (24-126)||(51420539-51420643)
chr4 (12-67)||(51865092-51865149)
chr4 (1-71)||(25629069-25629141)
[»] chr2 (55 HSPs)
chr2 (1-131)||(9671140-9671271)
chr2 (1-131)||(12023962-12024093)
chr2 (1-131)||(21779304-21779434)
chr2 (1-131)||(8455359-8455491)
chr2 (10-131)||(23397726-23397847)
chr2 (10-131)||(11514396-11514519)
chr2 (19-121)||(24200686-24200790)
chr2 (11-131)||(25249791-25249912)
chr2 (1-131)||(10543658-10543792)
chr2 (1-131)||(14530278-14530412)
chr2 (1-131)||(22371017-22371146)
chr2 (13-131)||(27573581-27573700)
chr2 (13-120)||(17667973-17668082)
chr2 (24-131)||(7214494-7214603)
chr2 (13-120)||(17623535-17623644)
chr2 (10-113)||(5450263-5450369)
chr2 (1-131)||(25079760-25079893)
chr2 (10-131)||(17896219-17896343)
chr2 (13-114)||(99320-99421)
chr2 (11-131)||(19977767-19977889)
chr2 (49-131)||(17705455-17705537)
chr2 (1-100)||(10546153-10546255)
chr2 (1-100)||(14444720-14444820)
chr2 (32-131)||(14544023-14544125)
chr2 (10-125)||(39914357-39914475)
chr2 (10-126)||(32781340-32781457)
chr2 (1-106)||(25641487-25641593)
chr2 (38-119)||(44604826-44604908)
chr2 (1-115)||(21377116-21377232)
chr2 (1-131)||(5840988-5841122)
chr2 (39-111)||(17380318-17380391)
chr2 (29-115)||(33795261-33795349)
chr2 (1-73)||(36871511-36871584)
chr2 (10-116)||(40416923-40417031)
chr2 (1-126)||(4516394-4516520)
chr2 (29-102)||(19614981-19615056)
chr2 (10-115)||(23145750-23145857)
chr2 (10-115)||(23557540-23557647)
chr2 (15-126)||(24860045-24860156)
chr2 (48-115)||(29419981-29420048)
chr2 (89-131)||(27466263-27466305)
chr2 (14-97)||(2003592-2003678)
chr2 (48-123)||(26684713-26684789)
chr2 (48-115)||(44521465-44521532)
chr2 (91-131)||(39189556-39189596)
chr2 (29-113)||(31158512-31158598)
chr2 (60-126)||(35017783-35017849)
chr2 (48-114)||(45235910-45235976)
chr2 (10-126)||(44643488-44643606)
chr2 (10-71)||(40762286-40762349)
chr2 (29-95)||(17471544-17471613)
chr2 (48-106)||(4852306-4852364)
chr2 (13-70)||(30826058-30826116)
chr2 (53-114)||(34752759-34752820)
chr2 (29-82)||(15296478-15296533)
[»] chr7 (65 HSPs)
chr7 (1-131)||(21172052-21172182)
chr7 (1-131)||(32758221-32758351)
chr7 (1-126)||(10693116-10693241)
chr7 (10-126)||(19426941-19427059)
chr7 (1-131)||(48735165-48735296)
chr7 (10-124)||(11617640-11617756)
chr7 (1-131)||(2541062-2541195)
chr7 (10-131)||(42476833-42476954)
chr7 (1-109)||(42391143-42391251)
chr7 (10-131)||(47077907-47078028)
chr7 (1-126)||(27629599-27629726)
chr7 (10-131)||(42798629-42798752)
chr7 (1-132)||(35334859-35334990)
chr7 (10-117)||(33871962-33872070)
chr7 (1-131)||(42805484-42805618)
chr7 (1-131)||(43557432-43557566)
chr7 (1-131)||(46354154-46354288)
chr7 (10-126)||(23419726-23419843)
chr7 (10-131)||(2662987-2663106)
chr7 (10-135)||(40463833-40463959)
chr7 (29-131)||(5180228-5180332)
chr7 (10-126)||(13805068-13805184)
chr7 (39-131)||(42495917-42496010)
chr7 (1-128)||(19265779-19265906)
chr7 (1-131)||(47716419-47716553)
chr7 (19-131)||(22699031-22699145)
chr7 (10-126)||(48123536-48123653)
chr7 (11-112)||(11741774-11741875)
chr7 (1-115)||(14099049-14099165)
chr7 (1-115)||(14409066-14409182)
chr7 (39-131)||(18326994-18327087)
chr7 (11-123)||(34626261-34626374)
chr7 (32-131)||(14732896-14732997)
chr7 (48-131)||(1424002-1424085)
chr7 (48-123)||(7794598-7794673)
chr7 (10-126)||(28362197-28362314)
chr7 (49-131)||(7193045-7193127)
chr7 (1-94)||(31591152-31591245)
chr7 (19-116)||(7644931-7645030)
chr7 (2-108)||(32233179-32233286)
chr7 (13-114)||(6736867-6736969)
chr7 (10-131)||(8148997-8149121)
chr7 (19-126)||(12473269-12473378)
chr7 (11-115)||(19266426-19266532)
chr7 (48-115)||(29907393-29907462)
chr7 (1-125)||(28078175-28078300)
chr7 (48-125)||(39123857-39123933)
chr7 (48-115)||(44123713-44123780)
chr7 (1-87)||(7879642-7879730)
chr7 (1-92)||(18512496-18512588)
chr7 (10-105)||(18747472-18747570)
chr7 (19-115)||(16341254-16341352)
chr7 (48-131)||(21447550-21447633)
chr7 (14-72)||(38604546-38604605)
chr7 (48-126)||(3469271-3469348)
chr7 (29-115)||(42101956-42102044)
chr7 (48-100)||(38262288-38262340)
chr7 (83-126)||(29140487-29140530)
chr7 (29-93)||(35203437-35203503)
chr7 (1-79)||(1408469-1408549)
chr7 (48-116)||(22065563-22065631)
chr7 (48-131)||(25198682-25198768)
chr7 (48-126)||(5814436-5814514)
chr7 (11-88)||(15108450-15108528)
chr7 (89-121)||(28685267-28685299)
[»] chr6 (38 HSPs)
chr6 (1-131)||(1346924-1347054)
chr6 (1-131)||(1354800-1354930)
chr6 (10-131)||(3815129-3815252)
chr6 (1-126)||(12221958-12222087)
chr6 (29-131)||(8409203-8409307)
chr6 (1-131)||(29355898-29356033)
chr6 (24-122)||(6024202-6024302)
chr6 (10-115)||(9161099-9161207)
chr6 (48-132)||(14975172-14975256)
chr6 (48-131)||(24734593-24734676)
chr6 (10-113)||(28007604-28007709)
chr6 (1-123)||(2166453-2166579)
chr6 (1-123)||(2178086-2178212)
chr6 (24-131)||(20400627-20400736)
chr6 (13-126)||(13905034-13905148)
chr6 (10-105)||(23240876-23240971)
chr6 (1-131)||(15866082-15866212)
chr6 (10-131)||(1941815-1941938)
chr6 (48-127)||(14553476-14553554)
chr6 (10-106)||(18277245-18277343)
chr6 (17-73)||(25557743-25557799)
chr6 (17-73)||(26097178-26097234)
chr6 (62-121)||(8417442-8417501)
chr6 (48-131)||(12063427-12063510)
chr6 (19-126)||(7947433-7947541)
chr6 (29-114)||(32728227-32728314)
chr6 (55-131)||(33922927-33923003)
chr6 (24-115)||(12889402-12889495)
chr6 (44-126)||(19649255-19649337)
chr6 (29-126)||(24097546-24097645)
chr6 (48-119)||(27855530-27855601)
chr6 (10-86)||(33138838-33138916)
chr6 (48-99)||(17432332-17432383)
chr6 (48-123)||(22967139-22967214)
chr6 (48-123)||(23821179-23821254)
chr6 (48-109)||(4136609-4136670)
chr6 (48-131)||(23930217-23930301)
chr6 (10-81)||(32579436-32579508)
[»] chr1 (72 HSPs)
chr1 (1-131)||(34725141-34725271)
chr1 (1-131)||(46247996-46248128)
chr1 (10-131)||(32632609-32632731)
chr1 (10-131)||(47214494-47214615)
chr1 (13-131)||(38478337-38478455)
chr1 (130-217)||(35417923-35418010)
chr1 (10-131)||(45812589-45812710)
chr1 (1-131)||(18944626-18944760)
chr1 (1-131)||(30395769-30395903)
chr1 (11-131)||(14617021-14617143)
chr1 (10-122)||(23768372-23768486)
chr1 (1-131)||(12126880-12127010)
chr1 (1-131)||(19414422-19414552)
chr1 (1-131)||(46991787-46991919)
chr1 (1-126)||(18724588-18724714)
chr1 (10-131)||(22930121-22930242)
chr1 (1-120)||(41319849-41319970)
chr1 (10-126)||(11596502-11596618)
chr1 (10-131)||(20004142-20004267)
chr1 (1-100)||(35253230-35253329)
chr1 (12-126)||(4430080-4430196)
chr1 (1-116)||(27201645-27201764)
chr1 (10-126)||(2435838-2435956)
chr1 (1-118)||(6925096-6925215)
chr1 (10-126)||(6983863-6983978)
chr1 (13-126)||(20036209-20036324)
chr1 (10-126)||(33222972-33223090)
chr1 (10-131)||(45402078-45402202)
chr1 (1-131)||(10668203-10668342)
chr1 (10-131)||(8197026-8197149)
chr1 (1-120)||(27474275-27474395)
chr1 (10-114)||(25468315-25468421)
chr1 (19-115)||(35117829-35117927)
chr1 (19-131)||(18742020-18742136)
chr1 (13-126)||(34679274-34679388)
chr1 (19-115)||(17470407-17470505)
chr1 (30-126)||(22327088-22327185)
chr1 (48-131)||(25290146-25290231)
chr1 (62-131)||(34714606-34714675)
chr1 (1-126)||(19932796-19932922)
chr1 (1-114)||(44485152-44485267)
chr1 (48-115)||(2435985-2436052)
chr1 (31-115)||(50760299-50760385)
chr1 (54-131)||(9939443-9939521)
chr1 (48-114)||(19701570-19701636)
chr1 (12-104)||(31272429-31272522)
chr1 (70-131)||(40424725-40424786)
chr1 (15-115)||(52910216-52910319)
chr1 (19-126)||(50811928-50812037)
chr1 (10-73)||(31382266-31382330)
chr1 (1-83)||(30682845-30682927)
chr1 (1-98)||(35005139-35005240)
chr1 (50-123)||(22151495-22151568)
chr1 (33-126)||(15511226-15511320)
chr1 (10-131)||(18335340-18335463)
chr1 (48-131)||(10163742-10163825)
chr1 (10-115)||(10378787-10378884)
chr1 (15-131)||(24564327-24564445)
chr1 (51-126)||(25554817-25554891)
chr1 (10-126)||(35019219-35019336)
chr1 (50-120)||(21723658-21723727)
chr1 (29-74)||(44745856-44745901)
chr1 (19-82)||(22324925-22324989)
chr1 (29-121)||(14987990-14988084)
chr1 (1-48)||(15505632-15505679)
chr1 (71-114)||(28894646-28894689)
chr1 (1-51)||(4349703-4349753)
chr1 (48-114)||(23371124-23371190)
chr1 (62-104)||(43768168-43768210)
chr1 (10-115)||(27136703-27136811)
chr1 (29-114)||(39215030-39215117)
chr1 (8-51)||(46859131-46859175)
[»] scaffold0187 (4 HSPs)
scaffold0187 (1-131)||(10093-10223)
scaffold0187 (1-131)||(20421-20551)
scaffold0187 (75-131)||(8905-8961)
scaffold0187 (75-131)||(19233-19289)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-131)||(30539-30669)
[»] chr5 (46 HSPs)
chr5 (1-131)||(8170027-8170157)
chr5 (1-131)||(35710273-35710403)
chr5 (10-131)||(41014279-41014401)
chr5 (29-131)||(37024627-37024729)
chr5 (1-131)||(24448850-24448982)
chr5 (1-131)||(38879541-38879675)
chr5 (1-104)||(32703411-32703514)
chr5 (1-131)||(43334162-43334297)
chr5 (1-131)||(4619147-4619281)
chr5 (1-131)||(27328712-27328846)
chr5 (1-126)||(19142986-19143111)
chr5 (48-131)||(1565391-1565474)
chr5 (19-131)||(22187245-22187359)
chr5 (10-131)||(22861721-22861841)
chr5 (48-131)||(23974741-23974823)
chr5 (11-131)||(2838738-2838860)
chr5 (1-131)||(30006285-30006417)
chr5 (19-131)||(31299592-31299705)
chr5 (1-73)||(7368416-7368488)
chr5 (11-119)||(22600426-22600536)
chr5 (10-107)||(1850624-1850722)
chr5 (39-126)||(39301089-39301177)
chr5 (10-115)||(28516485-28516593)
chr5 (10-115)||(208979-209086)
chr5 (10-106)||(22907917-22908014)
chr5 (48-126)||(12006422-12006500)
chr5 (10-108)||(1405170-1405270)
chr5 (61-126)||(17419879-17419944)
chr5 (65-126)||(39079875-39079935)
chr5 (1-87)||(43574610-43574698)
chr5 (48-96)||(22025538-22025586)
chr5 (1-82)||(13801810-13801895)
chr5 (48-111)||(34074654-34074717)
chr5 (48-126)||(10634238-10634315)
chr5 (10-113)||(24323757-24323862)
chr5 (10-113)||(24360381-24360486)
chr5 (10-91)||(41425948-41426031)
chr5 (99-131)||(41956892-41956924)
chr5 (1-67)||(7097803-7097870)
chr5 (14-66)||(16880703-16880757)
chr5 (19-99)||(42924895-42924977)
chr5 (93-131)||(19438709-19438747)
chr5 (74-116)||(31362453-31362495)
chr5 (1-72)||(20135623-20135698)
chr5 (10-71)||(29334415-29334479)
chr5 (7-70)||(5873371-5873435)
[»] chr3 (63 HSPs)
chr3 (1-131)||(1217072-1217202)
chr3 (16-131)||(7696945-7697060)
chr3 (1-131)||(22122960-22123090)
chr3 (1-131)||(8247730-8247864)
chr3 (10-129)||(26869691-26869811)
chr3 (1-131)||(16735423-16735554)
chr3 (1-131)||(39203498-39203628)
chr3 (31-131)||(10870025-10870126)
chr3 (1-131)||(40272855-40272987)
chr3 (1-131)||(46421078-46421212)
chr3 (1-131)||(13730645-13730779)
chr3 (1-131)||(22609749-22609879)
chr3 (1-131)||(13628833-13628968)
chr3 (10-123)||(4495716-4495831)
chr3 (1-126)||(26573115-26573241)
chr3 (1-131)||(29366763-29366897)
chr3 (1-131)||(52926262-52926385)
chr3 (14-131)||(12914091-12914210)
chr3 (11-126)||(45620881-45620998)
chr3 (1-84)||(31592878-31592961)
chr3 (10-131)||(6411874-6411996)
chr3 (1-114)||(34420686-34420802)
chr3 (31-131)||(9607185-9607287)
chr3 (11-110)||(7942993-7943094)
chr3 (48-131)||(5173812-5173896)
chr3 (48-126)||(35417904-35417981)
chr3 (33-105)||(516417-516491)
chr3 (48-111)||(30928239-30928302)
chr3 (24-111)||(39211992-39212081)
chr3 (10-117)||(33235526-33235637)
chr3 (41-115)||(53062036-53062112)
chr3 (33-131)||(12525392-12525489)
chr3 (10-102)||(54032611-54032705)
chr3 (10-102)||(33926094-33926188)
chr3 (10-115)||(53996617-53996725)
chr3 (10-126)||(45948890-45949010)
chr3 (1-64)||(15797271-15797334)
chr3 (24-131)||(21875002-21875105)
chr3 (48-114)||(25944468-25944534)
chr3 (19-85)||(10795486-10795554)
chr3 (1-67)||(47624088-47624155)
chr3 (18-115)||(28904941-28905041)
chr3 (19-102)||(45139539-45139624)
chr3 (10-107)||(8410919-8411016)
chr3 (10-81)||(14986989-14987064)
chr3 (83-132)||(25517300-25517349)
chr3 (1-73)||(54484730-54484805)
chr3 (10-115)||(19731000-19731107)
chr3 (15-71)||(31831241-31831297)
chr3 (48-131)||(26782348-26782431)
chr3 (10-73)||(31904909-31904974)
chr3 (1-55)||(34771407-34771461)
chr3 (13-94)||(52428532-52428616)
chr3 (1-98)||(54374388-54374488)
chr3 (10-115)||(19751576-19751683)
chr3 (11-63)||(26292382-26292434)
chr3 (1-70)||(49013516-49013589)
chr3 (10-81)||(55401208-55401282)
chr3 (13-64)||(9276313-9276366)
chr3 (48-126)||(43956552-43956629)
chr3 (8-73)||(31672733-31672800)
chr3 (48-80)||(43114962-43114994)
chr3 (1-67)||(45786257-45786327)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-126)||(11097-11221)
[»] scaffold0258 (1 HSPs)
scaffold0258 (10-131)||(13076-13198)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-131)||(226457-226581)
[»] scaffold0049 (1 HSPs)
scaffold0049 (19-131)||(58937-59051)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-122)||(1630-1751)
[»] scaffold0057 (4 HSPs)
scaffold0057 (1-131)||(24815-24942)
scaffold0057 (1-126)||(46796-46923)
scaffold0057 (10-71)||(43679-43740)
scaffold0057 (68-114)||(46995-47041)
[»] scaffold0036 (1 HSPs)
scaffold0036 (10-132)||(35069-35195)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-126)||(10775-10902)
[»] scaffold0254 (1 HSPs)
scaffold0254 (48-123)||(4125-4200)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-70)||(48677-48746)
[»] scaffold0024 (1 HSPs)
scaffold0024 (63-131)||(83835-83903)
[»] scaffold0031 (1 HSPs)
scaffold0031 (48-123)||(43097-43172)
[»] scaffold0116 (1 HSPs)
scaffold0116 (48-117)||(8865-8934)
[»] scaffold0194 (1 HSPs)
scaffold0194 (60-131)||(24624-24695)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-126)||(72924-73031)
[»] scaffold0167 (1 HSPs)
scaffold0167 (10-126)||(23569-23682)


Alignment Details
Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12670293 - 12670423
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  12670293 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 12670392  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  12670393 gacaacaactttaccagttgcgccaaggtta 12670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30454140 - 30454270
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| ||||  |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  30454140 cgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 30454239  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  30454240 gacaacaactttaccagttgcgccaaggtta 30454270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 20869564 - 20869672
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20869564 tgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgc 20869663  T
Q  124 caatgttat 132  Q
    ||| |||||    
T  20869664 caaggttat 20869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 36720888 - 36720756
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| || |||||||    
T  36720888 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcac 36720789  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| |||||| ||||    
T  36720788 atgacaacaactttaccagttacgccaaggtta 36720756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13160793 - 13160669
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||| || ||||||||    
T  13160793 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcaca 13160694  T
Q  100 tgacaacaactttaccagttgcgcc 124  Q
    |||||||||||||||||||||||||    
T  13160693 tgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28817669 - 28817801
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||| | |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| || |||||||    
T  28817669 cgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcac 28817768  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||| |||| ||||    
T  28817769 atgacaacaactttaccagttgcaccaaggtta 28817801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 17823656 - 17823541
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||| |||| | |||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  17823656 ccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaact 17823557  T
Q  111 ttaccagttgcgccaa 126  Q
    ||||||||||||||||    
T  17823556 ttaccagttgcgccaa 17823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 2626605 - 2626479
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-----acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgaca 104  Q
    |||||| |||||| |||| |||||||||||||||||||||||     |||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  2626605 gtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgaca 2626506  T
Q  105 acaactttaccagttgcgccaatgtta 131  Q
    |||||||||||| ||||||||| ||||    
T  2626505 acaactttaccaattgcgccaaggtta 2626479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 35261762 - 35261639
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||  |||||||||||||  ||||||||| |||||||||||  ||||||||||||| || ||||||||||||||||    
T  35261762 gtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaaca 35261663  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||| ||||    
T  35261662 actttaccagttgcgccaaggtta 35261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 29521738 - 29521860
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||||||||| |||| ||||||||| |||||||||||||  | |||||||||||||||||||| ||||||||||||| || |||||||| ||||||||    
T  29521738 tcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaa 29521837  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    ||||| |||||||||||| ||||    
T  29521838 ctttatcagttgcgccaaggtta 29521860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 45071356 - 45071225
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||| | ||||||||||||| || || |||||    
T  45071356 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcaca 45071257  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||  |||||| ||||    
T  45071256 tgacaacaactttaccagtatcgccaaggtta 45071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 39461062 - 39461171
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| ||||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  39461062 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgc 39461161  T
Q  122 gccaatgtta 131  Q
    ||||| ||||    
T  39461162 gccaaggtta 39461171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7136570 - 7136704
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||  |||||||||||||| ||||||||||| |||||||| |||| || |||||    
T  7136570 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtc 7136669  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  7136670 acatgacaacaactttaccagttgcgccaaggtta 7136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 18164821 - 18164929
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccag 117  Q
    |||| |||| ||||||||  ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |    
T  18164821 tttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccgg 18164920  T
Q  118 ttgcgccaa 126  Q
    |||||||||    
T  18164921 ttgcgccaa 18164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 28407469 - 28407381
Alignment:
Q  39 cttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  28407469 cttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 28407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 44530232 - 44530109
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| |||||||||||||  |||||||||| |||||||| || ||||||||||||| ||  |||||||||||| ||    
T  44530232 gtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagca 44530133  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||| ||||    
T  44530132 actttaccagttgcgccaaggtta 44530109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 6760907 - 6760787
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    |||||||||||  || |||| |||||| || |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  6760907 gtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaa 6760808  T
Q  106 caactttaccagttgcgccaa 126  Q
    |||||||||||||||||||||    
T  6760807 caactttaccagttgcgccaa 6760787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24365102 - 24365218
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg---ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || ||||||||||||| |||| ||| ||||| |||||||||   ||||||||||||||||||||| |||  ||||||||||||||||| |||||    
T  24365102 cgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacattttagtca 24365201  T
Q  98 catgacaacaactttac 114  Q
    |||||||||||||||||    
T  24365202 catgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 11748363 - 11748259
Alignment:
Q  29 tgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||| |||||||||||  ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  11748363 tgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgcaccaa 11748264  T
Q  127 tgtta 131  Q
     ||||    
T  11748263 agtta 11748259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20284112 - 20284248
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt----acacaagaggctgtttccaggatttgaacccgtgacatttcag 94  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||| ||||    | |||||||||||||||||||| ||||||||||||| ||||||    
T  20284112 cgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcag 20284211  T
Q  95 tcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| |||||| ||| ||||    
T  20284212 tcacatgacaacaactttacccgttgcgtcaaggtta 20284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 21070794 - 21070877
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||    
T  21070794 ttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 21070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12625982 - 12625858
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || ||||||||||||| |||| |||| ||||||||||||||||||   |||||||||| ||||||||||| |||| |||||||| |   |||||    
T  12625982 cgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtca 12625883  T
Q  98 catgacaacaactttaccagttgcg 122  Q
    || ||||||||||||||||||||||    
T  12625882 cacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 26954218 - 26954092
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgaca 104  Q
    |||||||||||  || |||| ||||||||| |||||||||||||   |||||||||||||||||||||| ||||||||||||| ||  | ||||||||||    
T  26954218 gtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgaca 26954119  T
Q  105 acaactttaccagttgcgccaatgtta 131  Q
    |||||||||||| || |||||| ||||    
T  26954118 acaactttaccaattacgccaaagtta 26954092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 8897807 - 8897933
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| |||||| || |||||||| ||||  ||||||| || ||||||||||| || |||||||||| || | |||||    
T  8897807 cgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcac 8897906  T
Q  99 atgacaacaactttaccagttgcgcca 125  Q
    |||||||||||||||||||||| ||||    
T  8897907 atgacaacaactttaccagttgtgcca 8897933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 24245510 - 24245411
Alignment:
Q  29 tgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatg 128  Q
    |||||| ||||||||||||||  ||| ||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |    
T  24245510 tgtacgtagtcttaccctgtt--acataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaagg 24245414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 44781567 - 44781675
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| ||||| ||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||||  |||||||||| ||||||||||||||||     
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc- 44781665  T
Q  117 gttgcgccaa 126  Q
    ||||||||||    
T  44781666 gttgcgccaa 44781675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 22598236 - 22598133
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    ||||| ||| |||| |||||  || |||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  22598236 caccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactt 22598137  T
Q  112 tacc 115  Q
    ||||    
T  22598136 tacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25250616 - 25250482
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| | |||||| ||||  |||||| ||||||||||||||| ||||||  ||||| || |||||    
T  25250616 cgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtc 25250517  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||| ||||| ||||    
T  25250516 acatgacaacaactttaccagttgtgccaaggtta 25250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 42083791 - 42083868
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||| |||||| ||||||||||    
T  42083791 ttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgccaa 42083868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 8483990 - 8484107
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| ||||||||| ||| |||||||||  |||||||||| ||||||||||| |||||||| |||||||| |||||| || ||||     
T  8483990 gtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgacatttaagtcacgtggcaacc 8484089  T
Q  108 actttaccagttgcgccaa 126  Q
     ||||||| ||||||||||    
T  8484090 gctttacc-gttgcgccaa 8484107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 30962865 - 30962942
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||||||||||||||||||||||| |||||  |||||| ||||| |||||||||||||||||| || ||||||||||    
T  30962865 ttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttttcc-gttgcgccaa 30962942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 35106007 - 35105902
Alignment:
Q  10 gtcccaccatt-tgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||| || |||| ||||||||| ||||| || |  ||||||||||||| ||||||||||| ||||||||||||| |||||| ||| |||||||    
T  35106007 gtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaac 35105908  T
Q  107 aacttt 112  Q
    ||||||    
T  35105907 aacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 14018035 - 14018138
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| |||||||||||| ||||||||||  ||||||||| ||||||||| || |||||||| |||| ||||| |||| |||||||||| ||||| |||||    
T  14018035 tgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc-gttgc 14018133  T
Q  122 gccaa 126  Q
    |||||    
T  14018134 gccaa 14018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5135332 - 5135423
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatt 90  Q
    ||||| || ||||||||||||| |||| ||||| ||| |||||||| ||||  |||||||||||||||||||||| ||||||||||| ||||    
T  5135332 cgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtgccatt 5135423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 31457255 - 31457155
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||| |||||||| |||| ||||||||| |||  ||| |||| |||||||||| ||||| ||||| ||||||||||||| |||||| |||||||||||||    
T  31457255 gtcctaccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaa 31457156  T
Q  109 c 109  Q
    |    
T  31457155 c 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23000262 - 23000365
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| |||| | |  |||||| |||||| |||||||||||||||||||||| ||  ||||||||| |||||||||||    
T  23000262 cgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcaca 23000359  T
Q  100 tgacaa 105  Q
    ||||||    
T  23000360 tgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 23286377 - 23286432
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgt 65  Q
    ||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  23286377 gtcccaccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29877186 - 29877112
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccagga 73  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||  |||||||||| |||||||||||||||    
T  29877186 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccagga 29877112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 11001001 - 11001109
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||| ||||| ||| |||| | ||||||   |||||  ||| ||||| ||| ||||||||||| ||| ||||| ||||||||||||    
T  11001001 gtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgacctttcaatcacatgacaac 11001100  T
Q  107 aactttacc 115  Q
    |||||||||    
T  11001101 aactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19729432 - 19729363
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttcca 70  Q
    ||||| || ||||||||||||| |||| ||||| ||| |||||||||||||||| ||||| |||||||||    
T  19729432 cgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacataagagactgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 389727 - 389642
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt----acacaagaggctgtttccaggatttgaacccgtgacatttc 92  Q
    ||||| |||||| |||| ||||||||  |||||||||||||    |||||||||| ||||||||||| ||||||||||||| ||||    
T  389727 tcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 27635058 - 27635020
Alignment:
Q  62 ctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  27635058 ctgtttccaggacttgaacccgtgacatttcagtcacat 27635020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 5689711 - 5689640
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaaccc 82  Q
    |||||||||| |||| ||||||||| |||||||||  |||||||||||||||| ||| || || ||||||||    
T  5689711 ccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 40605044 - 40605080
Alignment:
Q  95 tcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||||| ||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagtta 40605080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 20870008 - 20869941
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccagga 73  Q
    |||||||||||  || |||| ||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  20870008 gtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 23286431 - 23286468
Alignment:
Q  94 gtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggtta 23286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 44742570 - 44742678
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| ||||||||| |||||||||  ||||||||| |||  ||||||||| | |||||| | |||| || || ||||  ||||||    
T  44742570 gtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaac 44742669  T
Q  107 aactttacc 115  Q
    |||||||||    
T  44742670 aactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 40607830 - 40607890
Alignment:
Q  62 ctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 122  Q
    |||||| | ||| |||||| | ||||||| |||| |||||||||||||||||||| |||||    
T  40607830 ctgttttcgggacttgaactcatgacattccagttacatgacaacaactttaccaattgcg 40607890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48598868 - 48598998
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  48598868 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 48598967  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  48598968 gacaacaactttaccagttgcgccaaggtta 48598998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20225074 - 20224944
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||    
T  20225074 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcacat 20224975  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  20224974 gacaacaactttaccagttgcgccaaggtta 20224944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 47528573 - 47528703
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  47528573 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 47528672  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| |||| ||||    
T  47528673 gacaacaactttaccagttgcaccaaggtta 47528703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5648350 - 5648219
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||    
T  5648350 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcaca 5648251  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||| ||||    
T  5648250 tgacaacaactttaccagttgcgccaaggtta 5648219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 11054206 - 11054321
Alignment:
Q  16 ccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccctgttttacacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 11054305  T
Q  116 agttgcgccaatgtta 131  Q
    ||||||||||| ||||    
T  11054306 agttgcgccaaagtta 11054321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 6430678 - 6430800
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  6430678 gtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaa 6430777  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||| ||||    
T  6430778 ctttaccagttgcgccaaggtta 6430800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5306707 - 5306838
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  5306707 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcaca 5306806  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||| ||||||||||||||||||||| ||||    
T  5306807 tgacatcaactttaccagttgcgccaaggtta 5306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 16408669 - 16408773
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  16408669 tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 16408768  T
Q  122 gccaa 126  Q
    |||||    
T  16408769 gccaa 16408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30639471 - 30639340
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||| ||||||||| |||| ||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||| ||||| |||||||||||    
T  30639471 cgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcaca 30639372  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
     |||||||||||||||||||||||||| ||||    
T  30639371 agacaacaactttaccagttgcgccaaggtta 30639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 14590921 - 14590797
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||| |||| |||| |||||||||||||   | ||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||    
T  14590921 gtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaac 14590822  T
Q  107 aactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||| ||||    
T  14590821 aactttaccagttgcgccaaggtta 14590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9832356 - 9832468
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||    
T  9832356 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgacctttcagtcagat 9832455  T
Q  101 gacaacaacttta 113  Q
     ||||||| ||||    
T  9832456 cacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 16911656 - 16911522
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| ||||||||| |||  ||||||||||||||||| |||| ||||||||||||| ||| ||||    
T  16911656 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtc 16911557  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  16911556 acatgacaacaactttaccagttgcgccaaggtta 16911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 40915910 - 40915802
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    |||||||||||| |||| ||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  40915910 tcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaac 40915811  T
Q  110 tttaccagt 118  Q
    |||||||||    
T  40915810 tttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 21647028 - 21646923
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  21647028 tgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 21646929  T
Q  127 tgttat 132  Q
     |||||    
T  21646928 ggttat 21646923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 8473674 - 8473790
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| |||| |||| |||||||||||  |||||||||||||||||||||| |||||||||  || || | |||| |||||||||||    
T  8473674 gtcccaccatttggtgtattgtatgcagccttaccctgttaaacacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaac 8473773  T
Q  110 tttaccagttgcgccaa 126  Q
    |||||||||||||||||    
T  8473774 tttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 17043446 - 17043549
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||    
T  17043446 gtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaaca 17043545  T
Q  108 actt 111  Q
    ||||    
T  17043546 actt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 39077852 - 39077948
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    ||||||||| | || ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  39077852 caccatttggtatattgtacgcaaccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29207941 - 29208039
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||    
T  29207941 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 30496365 - 30496490
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| |||||||| ||||||| |||| |||| |||| |||||||   |||||||||||||||||||||| || |||||| |||||| |||||||||| |    
T  30496365 cgggaaggagtccccccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgt 30496464  T
Q  101 gacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||  ||||||||||||    
T  30496465 gacaacaacttttacagttgcgccaa 30496490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 54175147 - 54175043
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgttt-ccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| ||||||||| ||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  54175147 gtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaac 54175048  T
Q  107 aactt 111  Q
    |||||    
T  54175047 aactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 17315390 - 17315473
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  17315390 ttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 17315473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 19027931 - 19027823
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| ||||||||| |||||||||||||  |||||||| | ||||||||||| ||||||||||||| |||||||||| ||||||||    
T  19027931 gtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 19027832  T
Q  108 actttacca 116  Q
    ||| |||||    
T  19027831 actctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 37494934 - 37494811
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| | || |||| |||  |||||||||||||  |||||||||| ||||||||||| ||||||| ||||| |||||||| |||| |||||    
T  37494934 gtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaaca 37494835  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    |||||||||||||| |||| ||||    
T  37494834 actttaccagttgcaccaaggtta 37494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 42164224 - 42164319
Alignment:
Q  33 cgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatg 128  Q
    ||||| ||||||||||||| |||||||||| |||||||| || ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaatg 42164319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 30352683 - 30352766
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| |  |||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||    
T  30352683 ttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggtta 30352766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 23501881 - 23501753
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||  |||||||||||||  ||||||||||||||      || ||||||||||||| ||||||||    
T  23501881 cgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgt------gacttgaacccgtgacctttcagtc 23501788  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  23501787 acatgacaacaactttaccagttgcgccaaggtta 23501753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35567262 - 35567146
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||  ||||| ||| |||||||||||||  ||||||| ||||||||||| || |||||||| |||| ||||||| ||    
T  35567262 cgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttcagttac 35567163  T
Q  99 atgacaacaactttacc 115  Q
    |||||||||||||||||    
T  35567162 atgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47444049 - 47443928
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatt----tcag 94  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||  || ||||||||||||||||||| ||||||||||||| ||    || |    
T  47444049 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtcgg 47443950  T
Q  95 tcacatgacaacaactttacca 116  Q
    |||||||| |||||||||||||    
T  47443949 tcacatgagaacaactttacca 47443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 44363203 - 44363294
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagt 118  Q
    ||||||||| | |||||||||||  ||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  44363203 tgtacgcagccctaccctgttttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 10660447 - 10660364
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| |||||| ||||||||||| ||||||  || || |||||||||||||||||||||||||||||||||||||| ||||    
T  10660447 ttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 10660364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 10874592 - 10874509
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| |||||| ||||||||||| ||||||  || || |||||||||||||||||||||||||||||||||||||| ||||    
T  10874592 ttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 10874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 41018846 - 41018945
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||| ||||| |||| |||||| || ||||||||  |||||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||    
T  41018846 gtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 54730292 - 54730209
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||  ||||||||||||||||||||||  ||||||||| ||||    
T  54730292 ttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagtta 54730209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 487201 - 487294
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttta--cacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||||||||  ||||| |||||||  ||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  487201 tgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 49938682 - 49938759
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcca 125  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||||||  | |||||||||    
T  49938682 ttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47441573 - 47441699
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || |||| |||||||| |||| ||||| ||| |||||||||  ||||||| ||||| |||||||  ||| ||||||| ||||| ||||||||||    
T  47441573 cgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcac 47441672  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
     |||||||||||||||| ||||||||||    
T  47441673 gtgacaacaactttacc-gttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25463214 - 25463108
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||  ||||||||  ||| ||| |||||  |||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  25463214 cgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcac 25463115  T
Q  99 atgacaa 105  Q
    |||||||    
T  25463114 atgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 5313099 - 5313169
Alignment:
Q  61 gctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||    
T  5313099 gctgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggtta 5313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 25343261 - 25343153
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| ||||||||| |||||||||||||  ||||||||| || ||||||| | ||||||| ||||| | |||||||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T
Q  117 gttgcgccaa 126  Q
     |||||||||    
T  25343161 -ttgcgccaa 25343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 54640431 - 54640508
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||| ||| ||||||||| |||||| ||||||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgccaa 54640508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 7385528 - 7385628
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| || || ||  |||||||| ||||  ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  7385528 gtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaaca 7385627  T
Q  108 a 108  Q
    |    
T  7385628 a 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 10277813 - 10277886
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgac 87  Q
    ||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||||||| ||||||||||||||||||    
T  10277813 caccatttggtgtattgtacgcagccttatcctattttatacaagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 13256467 - 13256572
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| ||||||||| |||||||||||||  ||||||||||||    |||||| |||||||  |||| || ||||||||||||||||||||||||||||||    
T  13256467 tgtattgtacgcagccttaccctgttttttacacaagaggct----ccaggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgc 13256562  T
Q  122 gccaatgtta 131  Q
     |||| ||||    
T  13256563 accaaggtta 13256572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 23580281 - 23580365
Alignment:
Q  31 tacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    ||||||||||| |||||||||  |||||||||||| |||| || | ||||||||||||| |||||||||| ||||||||||||||    
T  23580281 tacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 30690275 - 30690340
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| ||||||    
T  30690275 ttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  50 ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||||| ||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  51 tacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||||| |||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 32629366 - 32629418
Alignment:
Q  54 acaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32629366 acaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54967112 - 54966987
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| | || |||| |||  |||||||||||||  |||||||||| | ||||||| | ||||||  ||||| ||||||||||    
T  54967112 cgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcac 54967014  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||| ||||||||||    
T  54967013 atgacaacaactttacc-gttgcgccaa 54966987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 20405156 - 20405053
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 120  Q
    |||| |||||||| ||||||||||||||   ||||||||||||||||| |||       |||||||| || |||||||||||||||||||||||||||||    
T  20405156 tgtattgtacgcaatcttaccctgtttttttacacaagaggctgtttctagg-------cccgtgaccttccagtcacatgacaacaactttaccagttg 20405064  T
Q  121 cgccaatgtta 131  Q
    || ||| ||||    
T  20405063 cgtcaaggtta 20405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 41549428 - 41549358
Alignment:
Q  45 ctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||  || |||||||||||||    
T  41549428 ctgttttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacc 41549358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14983926 - 14983806
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||  |||| |||| |||  |||||||| ||||  ||||||||||||||||| | || ||||| ||||||| || || |||     
T  14983926 cgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcat 14983827  T
Q  99 atgacaacaactttaccagtt 119  Q
    |||||||||||||||||||||    
T  14983826 atgacaacaactttaccagtt 14983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 55766532 - 55766641
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaaccc-gtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| ||||||||| ||||||||||||  ||||||||  |||||||||  | |||||||| ||||| || | ||||||||||||||||||||||||||||    
T  55766532 tgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgc 55766631  T
Q  122 gccaatgtta 131  Q
    | ||| ||||    
T  55766632 gtcaaggtta 55766641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 20373898 - 20373969
Alignment:
Q  60 ggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||| |||| ||||||  ||||||||||||||| |||| |||||||| |||||||||||||| ||||    
T  20373898 ggctgtttcaaggaattgaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagtta 20373969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 32478867 - 32478942
Alignment:
Q  39 cttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    ||||||||||||| |||| ||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||||    
T  32478867 cttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49796889 - 49796818
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccag 71  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||| |||||| ||||||||||||||||||||    
T  49796889 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 36589786 - 36589710
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||||||||||||||||||||||| ||||||| | ||| |||||||||  ||||| |||||||||| ||||||||||    
T  36589786 ttttacacaagaggctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc-gttgcgccaa 36589710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 39029127 - 39029220
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| ||||| ||| |||||||||||||  ||||||||||||||||||| |  |||||||  |||| ||| ||||||| |||||||||||||||    
T  39029127 tgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7909324 - 7909397
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgtttccagga 73  Q
    ||||| || ||||||||||||| |||| ||||||||  ||||||||| ||||||||||||| ||||||||||||    
T  7909324 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 55830787 - 55830896
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaac-ccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| |||||||||  |||||||||||  ||||||||| |||||||||  | |||||| ||||||| || |  |||||||||||||||||||||||||||    
T  55830787 tgtattgtacgcagcattaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgc 55830886  T
Q  122 gccaatgtta 131  Q
    | ||| ||||    
T  55830887 gtcaaggtta 55830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20639701 - 20639776
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccagga 73  Q
    ||||| || |||||||||||| | |||| ||||||||| |||||||||||||  ||||||||||||||||||||||    
T  20639701 cgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagga 20639776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 7038126 - 7038041
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgac 103  Q
    |||| |||| |||||| ||||||||||| ||||  |||||||| |||||||| |||| ||||||| ||||| |||||||||||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctgtttc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 49938513 - 49938608
Alignment:
Q  32 acgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||| ||||||||||||| |||||| | |||| ||||| || ||||| | ||||| |||||||||| |||||||||||||  | ||||||||||    
T  49938513 acgcagccttaccctgtttttacacaatacgctgcttccaagacttgaatctgtgacctttcagtcacgtgacaacaacttttaccgttgcgccaa 49938608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 7227771 - 7227710
Alignment:
Q  52 acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    ||||||| || ||||||| | |||||||| | |||| |||||||||||||||||||||||||    
T  7227771 acacaagcggttgtttcctgaatttgaactcatgacttttcagtcacatgacaacaacttta 7227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 18969738 - 18969701
Alignment:
Q  94 gtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggtta 18969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 3580932 - 3580994
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||||||||||||   ||||||| | |||||| |||||| ||||||||||||||||||||||||||    
T  3580932 ttttacacaagagg---tttccag-acttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 9987886 - 9987957
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggatttgaa 79  Q
    ||||||||||||| |||| |||| |||| |||||||| ||  |||||||||||| ||||||||||| |||||    
T  9987886 gtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20908679 - 20908797
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttacc--ctgttttacacaagaggctgtttccaggatttgaacccgtgacattt-cagtc 96  Q
    ||||| || |||||||||||| | |||| ||||||||| ||||||  || ||||| | |||| | |||||||| || ||||||  || |||||| |||||    
T  20908679 cgggaaggggtcccaccattttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtttccatgacttgaacatgtaacattttcagtc 20908778  T
Q  97 acatgacaacaactttacc 115  Q
    |||||||||||||||||||    
T  20908779 acatgacaacaactttacc 20908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 30581508 - 30581636
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||| | |||| ||||| ||  |||||||||||||   |||||||||| |||||||| || |||||||| |||| ||| |||     
T  30581508 cgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgaccttttagtg 30581607  T
Q  97 acatgacaacaactttaccagttgcgccaa 126  Q
    |  |||||||||||||| | ||||||||||    
T  30581608 atgtgacaacaactttagc-gttgcgccaa 30581636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21489180 - 21489099
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaa 79  Q
    ||||| || |||||||||||| | || | ||||||||||||||| |||||||  || ||||||||||||||||||| |||||    
T  21489180 cgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 29879634 - 29879672
Alignment:
Q  93 agtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  29879634 agtcacatgacaacaactttatcagttgcaccaatgtta 29879672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 50856344 - 50856405
Alignment:
Q  64 gtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||| |||| ||||||||||||| ||||| |||  |||||||||||||||| ||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgccaa 50856405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 51420643 - 51420539
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccg-tgacatttcagtcacatgacaacaactttaccagttg 120  Q
    |||| ||||| ||| |||||||||||||  |||||||||| |||||||| || ||||| |   |||| |||||||||| |||||||||||| ||| ||||    
T  51420643 tgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatcaactgacctttcagtcacgtgacaacaacttcacc-gttg 51420545  T
Q  121 cgccaa 126  Q
    ||||||    
T  51420544 cgccaa 51420539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 51865092 - 51865149
Alignment:
Q  12 cccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgttt 67  Q
    ||||||||||| |||| ||||||||| |||||| ||  ||||||||||||||||||||    
T  51865092 cccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25629141 - 25629069
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccc--tgttttacacaagaggctgtttccag 71  Q
    ||||| || ||||||||||||| |||| ||||| ||| |||||||  | ||||||||||||| ||||||||||    
T  25629141 cgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9671271 - 9671140
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacattt-cagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9671271 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcaca 9671172  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||| |||||||||| ||||    
T  9671171 tgacaacaactttaccggttgcgccaaggtta 9671140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12023962 - 12024093
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  12023962 cgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcaca 12024061  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||| ||||    
T  12024062 tgacaacaactttaccagttgcgccaaggtta 12024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21779304 - 21779434
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  21779304 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaagaggctgtctccaggacttgaacccgtgacctttcagtcacat 21779403  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||| |||||||||||||| ||||    
T  21779404 gacaacaacttcaccagttgcgccaaggtta 21779434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8455359 - 8455491
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  8455359 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcac 8455458  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||| ||||    
T  8455459 atgacaacaactttaccagttgcgccaaggtta 8455491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 23397847 - 23397726
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| |||||| || |||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  23397847 gtcccaccatttggtgtattgtacgtagccttaccctattttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaac 23397748  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    |||||||||||| |||| ||||    
T  23397747 tttaccagttgcaccaaggtta 23397726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 11514519 - 11514396
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| |||||  ||||||  |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  11514519 gtcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaaca 11514420  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||| ||||    
T  11514419 actttaccagttgcgccaaggtta 11514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 24200686 - 24200790
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T
Q  117 gttgc 121  Q
    |||||    
T  24200786 gttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 25249791 - 25249912
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgttt-tacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    |||||||||||| |||| ||||||||| |||||||||||| |||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||||    
T  25249791 tcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaac 25249890  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    ||||||| ||||||||| ||||    
T  25249891 tttaccaattgcgccaaggtta 25249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10543792 - 10543658
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||| |  |||| ||||||||| |||||||||||||  ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  10543792 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtc 10543693  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||| |||||||||||| ||||    
T  10543692 acatgacaacaactttatcagttgcgccaaggtta 10543658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14530412 - 14530278
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| |||||| || |||||||||||||  | |||||||||||||||||||| ||||||||||||| ||||||||    
T  14530412 cgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtc 14530313  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  14530312 acatgacaacaactttaccagttgcgccaaggtta 14530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22371146 - 22371017
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||  ||| |||||||||||||||| ||||||||||||| |  |||||||||    
T  22371146 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacgaggctgtttccaggacttgaacccgtgacctcccagtcacat 22371048  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||| ||||| ||||    
T  22371047 gacaacaactttaccagttgggccaaggtta 22371017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 27573700 - 27573581
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgttt-tacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||||||| |||| ||||||||| |||||| ||||| |||||||||||||||| || ||| |||||||  |||| |||||||||||||||||||||||    
T  27573700 ccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactt 27573601  T
Q  112 taccagttgcgccaatgtta 131  Q
    ||||||||||||||| ||||    
T  27573600 taccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 17668082 - 17667973
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||| |||| ||||||||| |||||||||  |||||||||||||| | ||||||||| ||||||||||||| || |||||||||||||||||||    
T  17668082 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaact 17667983  T
Q  111 ttaccagttg 120  Q
    ||||||||||    
T  17667982 ttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 7214603 - 7214494
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| ||||||||| ||||||||||  |||||||||||| ||||||||| || |||||||| |||| ||||||||||||||||||||||||||||||||     
T  7214603 tgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgt 7214504  T
Q  122 gccaatgtta 131  Q
    ||||| ||||    
T  7214503 gccaaagtta 7214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 17623644 - 17623535
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||| |||| ||||||||| |||||||||  |||||||||||||| |||||| |||| ||||||||||||| || ||||| |||||||||||||    
T  17623644 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaact 17623545  T
Q  111 ttaccagttg 120  Q
    ||||||||||    
T  17623544 ttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 5450369 - 5450263
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||| |||| |||| ||||||||| |||||| ||||||   |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  5450369 gtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaac 5450270  T
Q  107 aacttta 113  Q
    |||||||    
T  5450269 aacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25079760 - 25079893
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || ||||||||||| | |||| ||||||||  |||||| ||||||   |||||||||| |||||| | || ||||||||||||| || ||||||    
T  25079760 cgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtca 25079859  T
Q  98 catgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||||| ||||    
T  25079860 catgacaacaactttaccagttgcgccaaggtta 25079893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 17896343 - 17896219
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| | || ||||||||| |||||||| ||||   |||||||||| |||||| |||| ||||| ||||||| |||| |||||||||||||    
T  17896343 gtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaac 17896244  T
Q  107 aactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||| ||| ||||    
T  17896243 aactttaccagttgcgtcaaggtta 17896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 99320 - 99421
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttt 112  Q
    |||||||||| |||| ||||||||| ||| || ||||||  ||||||||||||||| |||| ||||||||||||| |||||||||| |||||||||||||    
T  99320 ccaccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaacttt 99419  T
Q  113 ac 114  Q
    ||    
T  99420 ac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19977767 - 19977889
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||||||||| |||| ||||||||  |||| ||| ||||  ||| |||||||||||||||| | ||||||||||||| |||| |||||||||||||||    
T  19977767 tcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaa 19977866  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    ||| ||||||| |||||| ||||    
T  19977867 cttcaccagttccgccaaggtta 19977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 17705537 - 17705455
Alignment:
Q  49 tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| |||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||| |||| ||||    
T  17705537 tttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggtta 17705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10546255 - 10546153
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||   | |||||||| ||||||||||| ||||||||||||| |||||||||    
T  10546255 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtca 10546156  T
Q  98 cat 100  Q
    |||    
T  10546155 cat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14444820 - 14444720
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| ||||  |||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||    
T  14444820 cgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcaca 14444721  T
Q  100 t 100  Q
    |    
T  14444720 t 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 14544125 - 14544023
Alignment:
Q  32 acgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatg 128  Q
    ||||||||||||||||||||   |||||||||||||||||||| |  || ||| || || |||||||||||||||||||||||||||| ||||||||| |    
T  14544125 acgcagtcttaccctgtttttctacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaagg 14544026  T
Q  129 tta 131  Q
    |||    
T  14544025 tta 14544023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 39914357 - 39914475
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||| | |||| ||||| ||  |||||||||||||   |||||||||| ||||||||| | |||| |||||||| || |||||||||||||||    
T  39914357 gtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaac 39914456  T
Q  107 aactttaccagttgcgcca 125  Q
    ||||||||||| |||||||    
T  39914457 aactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 32781340 - 32781457
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| |||||||||||||||||||  |||||||||||||| |||||||  || |||||| |||||| ||||||  ||||  |||||    
T  32781340 gtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttcagcaacattgcaaca 32781439  T
Q  108 actttaccagttgcgccaa 126  Q
    ||||||||| |||||||||    
T  32781440 actttacca-ttgcgccaa 32781457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25641593 - 25641487
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||| ||||| |||| ||||||||   |||||||||||| |||||| | ||||||||||||| ||||||||||||| |||||||||||    
T  25641593 cgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcaca 25641494  T
Q  100 tgacaac 106  Q
    |||||||    
T  25641493 tgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 44604908 - 44604826
Alignment:
Q  38 tcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagtt 119  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||| ||||| || |||||||||||||||||||||| |||||    
T  44604908 tcttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21377116 - 21377232
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| || | ||||| ||| |||||||||||||  |||||||||| |||||| | || |||||| ||| || ||||||||||    
T  21377116 cgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcac 21377215  T
Q  99 atgacaacaactttacc 115  Q
    |||||||||||||||||    
T  21377216 atgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5841122 - 5840988
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||  |||||||| ||||  |||||| |||||||||| |||| ||||||||||||| || |||||    
T  5841122 cgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtc 5841023  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||| || |||| |||| ||||    
T  5841022 acatgacaacaactttatcatttgcaccaaggtta 5840988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 17380318 - 17380391
Alignment:
Q  39 cttaccctgttt-tacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||||||||| ||||||||||| |||||||| || ||||||||||||| |||| ||||||||||||||||||    
T  17380318 cttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 33795349 - 33795261
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||||| |||||||||||||  || ||||||| ||||||| ||| ||||||||||||| ||||| |||| ||||||||||||||||    
T  33795349 tgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36871584 - 36871511
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccagga 73  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36871584 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaagaggctgtttccagga 36871511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 40416923 - 40417031
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||||| || ||| |||| ||||| ||| ||| |||||||||  | |||||||| |||||||| || ||||||||||||| || ||||||||||||||||    
T  40416923 gtcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaaca 40417022  T
Q  108 actttacca 116  Q
    |||||||||    
T  40417023 actttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4516394 - 4516520
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||| ||| |||| |||||||||  || |||||||||  ||||||||||||||||| || | |||||   ||||| ||||||||||    
T  4516394 cgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcac 4516493  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
     |||||||||||||||| ||||||||||    
T  4516494 gtgacaacaactttacc-gttgcgccaa 4516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 19615056 - 19614981
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatga 102  Q
    |||||||||||||||||||||||  | |||||||| |||||| |||| ||||||||||||| ||||||||||||||    
T  19615056 tgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 23145750 - 23145857
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| ||||||||| ||||| |||||||  ||||||||| |||||| || || ||||||||||||| ||||||||||   ||||||    
T  23145750 gtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaaca 23145849  T
Q  108 actttacc 115  Q
    ||||||||    
T  23145850 actttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 23557540 - 23557647
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| ||||||||| ||||| |||||||  ||||||||| |||||| || || ||||||||||||| ||||||||||   ||||||    
T  23557540 gtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaaca 23557639  T
Q  108 actttacc 115  Q
    ||||||||    
T  23557640 actttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 24860045 - 24860156
Alignment:
Q  15 accatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    |||||||| |||| ||||||||| || ||| |||||| |||| ||||| ||||||||||  || ||||||| || || ||||||||||||||||| ||||    
T  24860045 accatttggtgtattgtacgcagcct-accatgtttttacaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttta 24860143  T
Q  114 ccagttgcgccaa 126  Q
    |||||||||||||    
T  24860144 ccagttgcgccaa 24860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 29419981 - 29420048
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||||||| ||||||||||| |||||| |||||| |||||||||  ||||||||||||||||    
T  29419981 ttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 27466263 - 27466305
Alignment:
Q  89 tttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27466263 tttcagtcacatgacaacaactttaccagttgcgccaatgtta 27466305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 2003592 - 2003678
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    |||||||||||||| ||||||||  |||||||||||||   || |||| |||||||||||||| ||| ||||||||| |||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtca 2003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 26684713 - 26684789
Alignment:
Q  48 ttttacacaagagg-ctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    |||||||||||||| |||||| ||||| || ||||  |||| ||||| |||||||||||||||||||||||||||||    
T  26684713 ttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 44521465 - 44521532
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||||||  |||||||| ||||||||| |||||| |||||||||| ||| ||||||||||||    
T  44521465 ttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaactttacc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 39189556 - 39189596
Alignment:
Q  91 tcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggtta 39189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 31158512 - 31158598
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttta 113  Q
    |||| ||| ||||||||||||||  || |||||||||||||  | || || ||||| |||| |||||||||||||||||||||||||    
T  31158512 tgtatgcaatcttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 35017849 - 35017783
Alignment:
Q  60 ggctgtttccaggatttgaacccgtgacatttca-gtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||||| ||||| || |||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  35017849 ggctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaa 35017783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 45235910 - 45235976
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||||| ||||| ||||||| |||| |||||| |||||  |||||||||||||| |||||||||||    
T  45235910 ttttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 44643606 - 44643488
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |  | ||||||||| ||||| |||||||   ||  |||||||| |||| || | |||||| |||||| ||||||||||||||  ||    
T  44643606 gtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgac 44643507  T
Q  107 aactttaccagttgcgccaa 126  Q
    |||||||||| |||||||||    
T  44643506 aactttacca-ttgcgccaa 44643488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 40762286 - 40762349
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccag 71  Q
    ||||||||||||| |||| |||||| || ||||||| |||||  ||||||||||||||||||||    
T  40762286 gtcccaccatttggtgtattgtacgtagccttacccagttttttacacaagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 17471613 - 17471544
Alignment:
Q  29 tgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagt 95  Q
    |||||||||||||| ||||||||   |||||||||||||||||   || ||||||| |||||||||||||    
T  17471613 tgtacgcagtcttatcctgtttttttacacaagaggctgtttctgagacttgaacctgtgacatttcagt 17471544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 4852306 - 4852364
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||| |||||||| |||||| ||||| |||||||| |||| |||| |||||||||||||    
T  4852306 tttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatgacaac 4852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 30826116 - 30826058
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttcca 70  Q
    |||||||||| |||| ||||||||  |||||||| |||| |||||||||||||||||||    
T  30826116 ccaccatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttcca 30826058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 34752759 - 34752820
Alignment:
Q  53 cacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||||||| ||||||||| | |||||  |||||| |||||||||||||| ||||| |||||    
T  34752759 cacaagaggttgtttccagaacttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 15296478 - 15296533
Alignment:
Q  29 tgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaaccc 82  Q
    ||||||||| ||||||||||  ||||||||| ||||||||||| ||| ||||||||    
T  15296478 tgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21172052 - 21172182
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  21172052 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacat 21172151  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  21172152 gacaacaactttaccagttgcgccaaggtta 21172182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32758351 - 32758221
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  32758351 cgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacat 32758252  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  32758251 gacaacaactttaccagttgcgccaaggtta 32758221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 10693116 - 10693241
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  10693116 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10693215  T
Q  101 gacaacaactttaccagttgcgccaa 126  Q
    |||||||||||||| |||||||||||    
T  10693216 gacaacaactttactagttgcgccaa 10693241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 19426941 - 19427059
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| |||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  19426941 gtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaaca 19427040  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||||||||||||||    
T  19427041 actttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48735165 - 48735296
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttcca-ggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||| |||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||    
T  48735165 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacacaagaggttgtttccaaggacttgaacccgtgacctttcagtcaca 48735264  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||| ||||    
T  48735265 tgacaacaactttaccagttgcgccaaggtta 48735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 11617640 - 11617756
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| |||||||||||||||||||||||  |||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||    
T  11617640 gtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaaca 11617739  T
Q  108 actttaccagttgcgcc 124  Q
    |||||||||||||||||    
T  11617740 actttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2541062 - 2541195
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacattt-cagtca 97  Q
    ||||| || ||||||||||||| ||||  |||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  2541062 cgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtca 2541161  T
Q  98 catgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||||| ||||    
T  2541162 catgacaacaactttaccagttgcgccaaggtta 2541195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 42476954 - 42476833
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||||||||| |||||||||| | ||||| ||||||| ||| |||||||||||||||||    
T  42476954 gtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaac 42476855  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    |||||||||| |||||||||||    
T  42476854 tttaccagttacgccaatgtta 42476833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42391143 - 42391251
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  42391143 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacat 42391242  T
Q  101 gacaacaac 109  Q
    |||||||||    
T  42391243 gacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 47077907 - 47078028
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||  |||| ||||||||   |||| || ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47077907 gtcccaccattttgtgtattgtacgcaactttactctattttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 47078006  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||| ||||    
T  47078007 tttaccagttgcgccaaggtta 47078028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27629726 - 27629599
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| | ||||||  |||||||||||||  |||||||||||||||||||||| ||||||||||||| |||| ||||     
T  27629726 cgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaa 27629627  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||||||||    
T  27629626 atgacaacaactttaccagttgcgccaa 27629599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 42798752 - 42798629
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||  ||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||    
T  42798752 gtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaaca 42798653  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||| ||||    
T  42798652 actttaccagttgcgccaaggtta 42798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 35334859 - 35334990
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||| | |||| ||||| |||||||||||||||||  ||| ||| |||||||||||| |||||| |||||| || |||||||||    
T  35334859 cgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacgagactgtttccaggacttgaactcgtgaccttccagtcacat 35334958  T
Q  101 gacaacaactttaccagttgcgccaatgttat 132  Q
    |||||||||||||||||||||||||| |||||    
T  35334959 gacaacaactttaccagttgcgccaaggttat 35334990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 33871962 - 33872070
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||||||| |||| |||||||| |||||||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  33871962 gtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 33872061  T
Q  109 ctttaccag 117  Q
    |||||||||    
T  33872062 ctttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 42805618 - 42805484
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||| ||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| || |||||    
T  42805618 cgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtc 42805519  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||| |||||| ||||    
T  42805518 acatgacaacaactttaccagttacgccaaggtta 42805484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43557566 - 43557432
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| ||||| |||||||  |||||||||||||||||||||| |||||||| |||| ||||||||    
T  43557566 cgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 43557467  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||| ||||    
T  43557466 acatgacaacaactttaccagttgcggcaaggtta 43557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 46354288 - 46354154
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||| ||||||||||| ||||||||||||| || || ||    
T  46354288 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatc 46354189  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  46354188 acatgacaacaactttaccagttgcgccaaggtta 46354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 23419726 - 23419843
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||||||||| | ||||||| ||||| ||| |||||||||||| ||    
T  23419726 gtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagca 23419825  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  23419826 actttacc-gttgcgccaa 23419843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 2662987 - 2663106
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||  ||||  | ||||||||| ||||||||    
T  2662987 gtcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaacaac 2663084  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    ||||| ||||||||||| ||||    
T  2663085 tttactagttgcgccaaggtta 2663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 40463959 - 40463833
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| | ||||||| ||||||| ||||| ||||||||| ||||||| | || ||||||||||||| || |||||||||||||||||    
T  40463959 gtcccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaa 40463860  T
Q  109 ctttaccagttgcgccaatgttataag 135  Q
    ||||||| |||||||||| ||||||||    
T  40463859 ctttaccggttgcgccaaggttataag 40463833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 5180228 - 5180332
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||| |||||||||||||||||  |||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  5180228 tgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaa 5180327  T
Q  127 tgtta 131  Q
     ||||    
T  5180328 ggtta 5180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 13805184 - 13805068
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccc-tgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||| ||| ||||||| |||||||||| ||||||| ||||||||| |||||||||| || ||||||||||||||||||||    
T  13805184 gtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaa 13805085  T
Q  109 ctttaccagttgcgccaa 126  Q
    |||||||| |||||||||    
T  13805084 ctttacca-ttgcgccaa 13805068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 42495917 - 42496010
Alignment:
Q  39 cttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  42495917 cttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggtta 42496010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19265906 - 19265779
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||| |||| ||||||| |||||| |||| || ||||||||||||| ||||||||||     
T  19265906 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacg 19265807  T
Q  100 tgacaacaactttaccagttgcgccaatg 128  Q
    |||||||||||||||| ||||||||||||    
T  19265806 tgacaacaactttacc-gttgcgccaatg 19265779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 47716553 - 47716419
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| || |||||    
T  47716553 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtc 47716454  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||| |||||||||| ||||||| ||||| ||||    
T  47716453 acatggcaacaacttttccagttgtgccaaggtta 47716419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 22699031 - 22699145
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| |||||||||||||||||||||||  ||||||||| || ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttacca 22699130  T
Q  117 gttgcgccaatgtta 131  Q
    |||||| ||| ||||    
T  22699131 gttgcgtcaaggtta 22699145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 48123536 - 48123653
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| |||| ||||| ||||||||||  |||||||||||||||||||||||| |||||||| |||| |||||| ||||||| ||||    
T  48123536 gtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataaca 48123635  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  48123636 actttacc-gttgcgccaa 48123653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 11741875 - 11741774
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||||| |||| ||||||||| |||||||| |||||||| ||| ||||||| ||||| |||||||| |||| ||||||||||||||||||||||    
T  11741875 tcccaccatttggtgtattgtacgcagccttaccctattttacactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaact 11741776  T
Q  111 tt 112  Q
    ||    
T  11741775 tt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14099049 - 14099165
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| |||||||||||||| ||||||||  |||||| ||||| ||||||||| || ||||| |||| ||||||||||    
T  14099049 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcac 14099148  T
Q  99 atgacaacaactttacc 115  Q
    |||||||||||||||||    
T  14099149 atgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14409066 - 14409182
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| |||||||||||||| ||||||||  |||||| ||||| ||||||||| || ||||| |||| ||||||||||    
T  14409066 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcac 14409165  T
Q  99 atgacaacaactttacc 115  Q
    |||||||||||||||||    
T  14409166 atgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 18327087 - 18326994
Alignment:
Q  39 cttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||    
T  18327087 cttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggtta 18326994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 34626261 - 34626374
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    |||||||||||| |||| || |||||| ||||||||||||| ||||| |||||||||||||||| ||||| | ||| | ||||| |||||||||||||||    
T  34626261 tcccaccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaac 34626360  T
Q  110 tttaccagttgcgc 123  Q
    ||||||||||||||    
T  34626361 tttaccagttgcgc 34626374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 14732896 - 14732997
Alignment:
Q  32 acgcagtcttaccctgttttacacaag--aggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgt 129  Q
    |||||| |||||||||||||  ||| |  ||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||    
T  14732896 acgcagccttaccctgttttttacatgggaggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggt 14732995  T
Q  130 ta 131  Q
    ||    
T  14732996 ta 14732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 1424002 - 1424085
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||| || |||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||| ||||    
T  1424002 ttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 7794598 - 7794673
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    ||||||| |||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  7794598 ttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 28362197 - 28362314
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| ||||||  |||||  ||||||||||| ||||| |||| ||||||| ||||| |||||| ||||||||||||    
T  28362197 gtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaaca 28362296  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  28362297 actttacc-gttgcgccaa 28362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 7193127 - 7193045
Alignment:
Q  49 tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggtta 7193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31591152 - 31591245
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcag 94  Q
    ||||| || |||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||| ||||||    
T  31591152 cgggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacacaagaggttgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 7645030 - 7644931
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| |||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||| |||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 32233179 - 32233286
Alignment:
Q  2 gggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    |||| ||| |||||||||||| |||||| ||||| | ||||||||||||| |||||||||| ||||||||||| |||||||| |||| |||||||||  |    
T  32233179 gggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggt 32233278  T
Q  101 gacaacaa 108  Q
    ||||||||    
T  32233279 gacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 6736969 - 6736867
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||||||| |||| |||| ||||||||||| |||||| | |||||||| |||||  |||| ||||||||||||| |||||||| ||||||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactt 6736870  T
Q  112 tac 114  Q
    |||    
T  6736869 tac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 8148997 - 8149121
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||| ||||||||  |||||||| ||||   ||||||||||  |||| ||||| |||||| |||||| || |||||||||||||||    
T  8148997 gtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcagtcacatgacaac 8149096  T
Q  107 aactttaccagttgcgccaatgtta 131  Q
    ||| |||||||||| ||||| ||||    
T  8149097 aacattaccagttgtgccaaggtta 8149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 12473378 - 12473269
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| ||||||||  |||||||||||||  |||||||||| ||||| ||||| |||||||| |||| ||||||  |||||||||||||||||||     
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccg 12473279  T
Q  117 gttgcgccaa 126  Q
    ||||||||||    
T  12473278 gttgcgccaa 12473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 19266532 - 19266426
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||| ||||| |||| ||||||||| |||||||||||||  || |||| |||| ||| ||||| ||||||||  ||| ||||||||||||||||||||    
T  19266532 tcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtcacatgacaacaa 19266433  T
Q  109 ctttacc 115  Q
    |||||||    
T  19266432 ctttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 29907462 - 29907393
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatg--acaacaactttacc 115  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  29907462 ttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 28078175 - 28078300
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttac-acaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| || | |||  |||||||||||||   ||| ||| ||||||| |||| ||||||||||||| || ||||||||    
T  28078175 cgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcaca 28078274  T
Q  100 tgacaacaactttaccagttgcgcca 125  Q
    |||||||||||| || ||||||||||    
T  28078275 tgacaacaacttcacgagttgcgcca 28078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 39123933 - 39123857
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcca 125  Q
    ||||||||||||| | ||||| |||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  39123933 ttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca-ttgcgcca 39123857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 44123713 - 44123780
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||||||||||||||||| | |||||||||| |  |||||||||||||||| ||||||||||    
T  44123713 ttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7879730 - 7879642
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgac 87  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||| ||||||  |||||||||  ||||||||||| |||||||||||||    
T  7879730 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgac 7879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18512496 - 18512588
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttc 92  Q
    ||||| || ||||||||||| | |||| ||||||||| |||||||| |||| |||||||| | ||||||||||| ||||||||||||| ||||    
T  18512496 cgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 18747570 - 18747472
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg---ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    ||||||||| ||| |||| | ||||||| |||||||||   |||||||||| |||||||||||| || |||| |||||||| |||||||||| ||||||    
T  18747570 gtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 16341352 - 16341254
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||| |||||| || |||||||||||||  ||||||||||||||||| || | ||||||||||||| |||||   |||||| ||||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 21447633 - 21447550
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||| || || ||||| ||||||| || || | |||||||||||| |||| |||||||||||| ||||    
T  21447633 ttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggtta 21447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 38604605 - 38604546
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgtttccagg 72  Q
    ||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  38604605 caccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 3469271 - 3469348
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||||||||||  |||||| |||| ||||  | ||||| ||||||||||||||||||||||||||| ||||||||||    
T  3469271 ttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgccaa 3469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 42101956 - 42102044
Alignment:
Q  29 tgtacgcagtcttaccctgttttacac--aagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||| ||||||||||||  ||  |||||||||||||||||| ||||||   |||| || ||||||| ||||||||||||||||    
T  42101956 tgtacgcagtgttaccctgttttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 38262288 - 38262340
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||||||||||| |||||||||||| ||||||||||||| || |||||||||    
T  38262288 ttttacacaagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 29140487 - 29140530
Alignment:
Q  83 gtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||    
T  29140487 gtgacctttcagttacatgacaacaactttaccagttgcgccaa 29140530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 35203503 - 35203437
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttca 93  Q
    |||||||||||||| ||||||||  |||||||||  ||||||||||| ||||||||||||| |||||    
T  35203503 tgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1408549 - 1408469
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaa 79  Q
    ||||| || ||||||||||||| |||| ||||| ||| |||||| ||||||  |||||||||||| ||||||||| |||||    
T  1408549 cgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 22065631 - 22065563
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||||||||||||| ||||||||  | |||||| | |||| ||||| |||| |||||||||||||||||    
T  22065631 ttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 25198768 - 25198682
Alignment:
Q  48 ttttacacaagaggctgtttccagga---tttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||| || ||||||||| ||   ||||| ||| |||  ||||||||| ||||||||||||||||||||| |||||| ||||    
T  25198768 ttttacacaaaagactgtttccaagactttttgatcccatgatctttcagtcatatgacaacaactttaccagttacgccaaggtta 25198682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 5814514 - 5814436
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||| |||||| | ||||||  | ||||||||||||| || || |||||| ||||||||||||||  |||||||||    
T  5814514 ttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaa 5814436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 15108450 - 15108528
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgaca 88  Q
    |||||| ||||| |||| ||||| ||| |||||| |||||| ||||||||  |||||||||||| |||||| |||||||    
T  15108450 tcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgaca 15108528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 28685267 - 28685299
Alignment:
Q  89 tttcagtcacatgacaacaactttaccagttgc 121  Q
    ||||||||||||||||||||||||| |||||||    
T  28685267 tttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1347054 - 1346924
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  1347054 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagtggctgtttccaggacttgaacccgtgacctttcagtcacat 1346955  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  1346954 gacaacaactttaccagttgcgccaaggtta 1346924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1354800 - 1354930
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  1354800 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaaccagtgacctttcagtcacat 1354899  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  1354900 gacaacaactttaccagttgcgccaaggtta 1354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 3815129 - 3815252
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||||| |||| | ||||  |||||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  3815129 gtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaaca 3815228  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||| ||||    
T  3815229 actttaccagttgcgccaaggtta 3815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12221958 - 12222087
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  ||||||||||||||||||| || ||||||||||||| ||||||||    
T  12221958 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtc 12222057  T
Q  97 acatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||||||||||    
T  12222058 acatgacaacaactttaccagttgcgccaa 12222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8409307 - 8409203
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||| |||||||||||||  ||||||||||| |||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  8409307 tgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgccaa 8409208  T
Q  127 tgtta 131  Q
     ||||    
T  8409207 ggtta 8409203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29355898 - 29356033
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29355898 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtc 29355997  T
Q  97 acatgacaacaa-ctttaccagttgcgccaatgtta 131  Q
    ||||||||||||  ||||||||||| ||||| ||||    
T  29355998 acatgacaacaatttttaccagttgtgccaaggtta 29356033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 6024302 - 6024202
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| |||||||||||||||| ||||||  ||||||||||||||||| |||||||||| ||||||| || || |||||||||||||||||||||||||||    
T  6024302 tgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgc 6024203  T
Q  122 g 122  Q
    |    
T  6024202 g 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 9161207 - 9161099
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||  || |||| ||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  9161207 gtcccaccattattgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaac 9161108  T
Q  107 aactttacc 115  Q
    |||||||||    
T  9161107 aactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 14975172 - 14975256
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgttat 132  Q
    |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||||||| |||||||||| |||||    
T  14975172 ttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttat 14975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 24734676 - 24734593
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| |||||| |||||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24734676 ttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgccaatgtta 24734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 28007709 - 28007604
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtga-catttca-gtcacatgacaaca 107  Q
    |||||| |||||| |||| ||||||||| || |||||||||||||||||||||| ||||||||| |||||||||||| | ||||| ||||||||||||||    
T  28007709 gtcccagcatttggtgtattgtacgcagcctgaccctgttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaaca 28007610  T
Q  108 acttta 113  Q
    ||||||    
T  28007609 acttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2166453 - 2166579
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||  |||| |||||  ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2166453 cgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtc 2166552  T
Q  97 acatgacaacaactttaccagttgcgc 123  Q
    |||| ||||||||||||| ||||||||    
T  2166553 acataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2178086 - 2178212
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||  |||| |||||  ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2178086 cgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtc 2178185  T
Q  97 acatgacaacaactttaccagttgcgc 123  Q
    |||| ||||||||||||| ||||||||    
T  2178186 acataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 20400736 - 20400627
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    |||| |||||||||||||||||||||||  |||||||||  ||||||||  | ||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  20400736 tgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgc 20400637  T
Q  122 gccaatgtta 131  Q
    ||||| ||||    
T  20400636 gccaaggtta 20400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 13905034 - 13905148
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||| || | |||| |||| |||||||||||||  ||||||||||  |||| ||||| |||| |||||||| ||||||||||||||||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaact 13905133  T
Q  111 ttaccagttgcgccaa 126  Q
    ||||| ||||||||||    
T  13905134 ttacc-gttgcgccaa 13905148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 23240876 - 23240971
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    ||||||||| ||| | || ||||||||  ||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||| ||||||    
T  23240876 gtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagaggctgtttccaggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15866082 - 15866212
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacac--aagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| |  ||||||  ||||||||||||  ||  |||||||||||||||||| |||||||| |||| ||||| ||||    
T  15866082 cgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcac 15866179  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    ||| |||||||||||||||||| ||||| ||||    
T  15866180 atgccaacaactttaccagttgggccaaggtta 15866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 1941938 - 1941815
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||| | |||| ||||||||| |||||||||||||  |||||||||| ||||| || || || || ||| ||| || |||||| |||||||||    
T  1941938 gtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaaca 1941839  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    |||||||||||||| |||| ||||    
T  1941838 actttaccagttgcaccaaggtta 1941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 14553554 - 14553476
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaat 127  Q
    |||||||||||| ||| ||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  14553554 ttttacacaagaagctatttccaggacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttgcaccaat 14553476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18277245 - 18277343
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||  ||||| ||  |||||||||  ||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||    
T  18277245 gtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 25557799 - 25557743
Alignment:
Q  17 catttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccagga 73  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  25557799 catttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 26097234 - 26097178
Alignment:
Q  17 catttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccagga 73  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  26097234 catttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 8417501 - 8417442
Alignment:
Q  62 ctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    ||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8417501 ctgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 12063510 - 12063427
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||| |||||||||| ||||||| |||| ||||    
T  12063510 ttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggtta 12063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 7947433 - 7947541
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| ||||||||| |||||||||  ||||||||| |||| ||||||||||| ||||||| ||||| ||||||||||   ||| ||||||||||     
T  7947433 tttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc- 7947531  T
Q  117 gttgcgccaa 126  Q
    ||||||||||    
T  7947532 gttgcgccaa 7947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 32728227 - 32728314
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||| |||||||||||||||||  ||| |||||| ||||||||  | ||||| | ||||| ||||||||||||||||||||||||||    
T  32728227 tgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 33922927 - 33923003
Alignment:
Q  55 caagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||  ||||| |||| ||||||| ||||| ||||||||| ||||||||||||||||| |||||||||| ||||    
T  33922927 caagaggacgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggtta 33923003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 12889495 - 12889402
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||| |||| ||| |||||||||  |||||||||||||||| || || ||||||| ||||| ||||| |||| ||||||||||||||||    
T  12889495 tgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 19649255 - 19649337
Alignment:
Q  44 cctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||| | ||| |||| ||| ||| |||| || ||||||  ||||||||||||||||||||||||| ||||||||||||    
T  19649255 cctgttttagataaggggctattttcagaatttaaatccgtgatctttcagtcacatgacaacaactttatcagttgcgccaa 19649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 24097645 - 24097546
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||| |||| |||||||||||||  | ||||||||||| ||| |||| || ||| |||||| ||||||| |||||||| ||| ||||||||||| |||||    
T  24097645 tgtaagcagccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttaccagttgtgccaa 24097546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 27855530 - 27855601
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagtt 119  Q
    ||||||||| || ||||||| | ||| || ||| || ||||||||||||||||||||| |||||||||||||    
T  27855530 ttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccagtt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 33138916 - 33138838
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtga 86  Q
    ||||||||||||| |||| ||||||| | ||||| |||||||  | |||||||| ||||||||||| ||||||||||||    
T  33138916 gtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 17432383 - 17432332
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    |||||||||||| | ||||||||||| ||||||| ||||| |||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 22967214 - 22967139
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    |||||||||||| | |||||||| || ||||||  ||||| || |||||||||||||| ||||||| ||| |||||    
T  22967214 ttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 22967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 23821179 - 23821254
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    |||||||||||| | |||||||| || ||||||  ||||| || |||||||||||||| ||||||| ||| |||||    
T  23821179 ttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 23821254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 4136609 - 4136670
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    |||||||||||| | |||||  |||| ||||||||||||||||| |||||| || |||||||    
T  4136609 ttttacacaagatgttgtttttaggacttgaacccgtgacattttagtcacgtggcaacaac 4136670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 23930217 - 23930301
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttg-aacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||| ||| ||||||||| || ||| ||| |||||| ||| || |||||||||||| |||||  ||||||||||| ||||    
T  23930217 ttttacacatgagactgtttccatgacttggaactcgtgacctttgagacacatgacaacatctttatgagttgcgccaaggtta 23930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 32579508 - 32579436
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacc 81  Q
    |||||||||||||  ||| ||||||||| |||||| | |||| | || ||||||||||||||||| |||||||    
T  32579508 gtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34725141 - 34725271
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  34725141 cgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 34725240  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  34725241 gacaacaactttaccagttgcgccaaggtta 34725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 46247996 - 46248128
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||    
T  46247996 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcac 46248095  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||| ||||| ||||    
T  46248096 atgacaacaactttaccagttgagccaaggtta 46248128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 32632609 - 32632731
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  32632609 gtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaa 32632708  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||| ||||    
T  32632709 ctttaccagttgcgccaaggtta 32632731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 47214615 - 47214494
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| ||||||||  |||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47214615 gtcccaccatttggtgtattgtacgcaaccttaccctgttttaaacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 47214516  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||| ||||    
T  47214515 tttaccagttgcgccaaagtta 47214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 38478337 - 38478455
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttt 112  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||    
T  38478337 ccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagttt 38478436  T
Q  113 accagttgcgccaatgtta 131  Q
    || ||||||||||| ||||    
T  38478437 actagttgcgccaaggtta 38478455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 35417923 - 35418010
Alignment:
Q  130 tataagttgacaaaacaaagagaaggatgtgaaagggaaatatgcagcctttggtgattattaaataatttatttactacaggattgc 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  35417923 tataagttgacaaaataaagagaaggatgtgaaagggaaatatgcaacctttggtgattattaaataacttatttactacaggattgc 35418010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 45812589 - 45812710
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| |||| |||| |||||||| ||||||||||||| |||||| ||||| ||||||| ||||| |||||||||||||||||||||    
T  45812589 gtcccaccatttggtgtattgtatgcagccttaccctcttttacacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 45812688  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    |||| |||||||||||| ||||    
T  45812689 tttatcagttgcgccaaggtta 45812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18944760 - 18944626
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||||  ||||||| ||||| ||||||||    
T  18944760 cgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtc 18944661  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  18944660 acatgacaacaactttaccagttgcgccaaggtta 18944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30395769 - 30395903
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||  ||||    
T  30395769 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtc 30395868  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  30395869 acatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 14617143 - 14617021
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||||||||| |||| ||||||||  |||||| ||||  |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  14617143 tcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaa 14617044  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    ||||||| |||||||||| ||||    
T  14617043 ctttaccggttgcgccaaggtta 14617021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 23768372 - 23768486
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| |||||||||||||  ||||||||||||||||||| || ||||||| ||||| || ||||||||||||||||    
T  23768372 gtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaaca 23768471  T
Q  108 actttaccagttgcg 122  Q
    |||||||||||||||    
T  23768472 actttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12126880 - 12127010
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||| ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| | || |||||||||| ||||| | ||||    
T  12126880 cgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttacacaagaagctgtttccagaacttaaacccgtgacctttcaattacat 12126979  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||||||||||| ||||    
T  12126980 gacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19414552 - 19414422
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||| ||||||||||| |||||||| |||| |||| ||||||||||||| ||||||||| ||    
T  19414552 cgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttacataagaggctctttctaggacttgaacccgtgacctttcagtcatat 19414453  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||| || |||||| ||||    
T  19414452 gacaacaactttaccaattacgccaaggtta 19414422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 46991919 - 46991787
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||| | |||| ||||| ||| |||||||||||||  |||||||||| ||||||||||| ||||||||||||| || |||||||    
T  46991919 cgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcac 46991820  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||| |||| ||||    
T  46991819 atgacaacaactttaccagttgcaccaaggtta 46991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18724588 - 18724714
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||  ||||| |||| ||||| ||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18724588 cgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcac 18724687  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||| ||||||||||    
T  18724688 atgacaacaactttacc-gttgcgccaa 18724714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 22930121 - 22930242
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||| | ||  ||||||||||||| |||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  22930121 gtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 22930219  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||| ||||    
T  22930220 ctttaccagttgcgccaaggtta 22930242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41319849 - 41319970
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || |||||| |||||| |||| ||||||||| |||||||||||||  ||||||||| |||||||||||| || |||| ||||| ||||||||||    
T  41319849 cgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcac 41319948  T
Q  99 atgacaacaactttaccagttg 120  Q
    ||||||||||||||||||||||    
T  41319949 atgacaacaactttaccagttg 41319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 11596618 - 11596502
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| | ||||||| ||||||||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||| | |    
T  11596618 gtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagcca 11596519  T
Q  109 ctttaccagttgcgccaa 126  Q
    ||||||| ||||||||||    
T  11596518 ctttacc-gttgcgccaa 11596502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 20004142 - 20004267
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    |||||||||||  || |||| ||||||||| |||||| ||||||  |||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  20004142 gtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaa 20004241  T
Q  106 caactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||| |||| ||||    
T  20004242 caactttaccagttgcaccaaggtta 20004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35253230 - 35253329
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  35253230 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 4430080 - 4430196
Alignment:
Q  12 cccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||||||||  |||||| || || || |||||||||| || ||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaac 4430179  T
Q  110 tttaccagttgcgccaa 126  Q
    |||||||| ||||||||    
T  4430180 tttaccagctgcgccaa 4430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27201764 - 27201645
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||| |  |||| ||||||||| ||||||||||||   |||||||||||||||||||||| |||||||| |||| ||||||||    
T  27201764 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtc 27201665  T
Q  97 acatgacaacaactttacca 116  Q
    ||||||||||||||||||||    
T  27201664 acatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 2435838 - 2435956
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| ||||||||| |||||||| ||||  ||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  2435838 gtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaac 2435937  T
Q  107 aactttaccagttgcgccaa 126  Q
    ||||||||| ||||||||||    
T  2435938 aactttacc-gttgcgccaa 2435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6925215 - 6925096
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||| | |||| ||| ||||| |||||||| ||||  |||||||||||| ||||||||| ||||||||||||| || |||||||    
T  6925215 cgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcac 6925116  T
Q  99 atgacaacaactttaccagt 118  Q
    ||||||||||||||||||||    
T  6925115 atgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 6983863 - 6983978
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| ||||||||  |||||||||||||  | | |||||||||||||||| ||||||| ||||| |||||||||| ||||||||||    
T  6983863 gtcccaccatttggtgtattgtacgcatacttaccctgttttttatacgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaac 6983962  T
Q  110 tttaccagttgcgccaa 126  Q
    ||||||| |||||||||    
T  6983963 tttacca-ttgcgccaa 6983978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 20036324 - 20036209
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgt---tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    |||||||||| |||| || ||||| ||||||||| |   ||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20036324 ccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 20036225  T
Q  110 tttaccagttgcgccaa 126  Q
    ||||||| |||||||||    
T  20036224 tttacca-ttgcgccaa 20036209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 33223090 - 33222972
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| ||||||||||||||||||| || || || ||||||| |||||||||||||||||||    
T  33223090 gtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaaca 33222991  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  33222990 actttaccggttgcgccaa 33222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 45402202 - 45402078
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagt-ctt--accctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    ||||||||||||| |||| |||||||||  |||  |||||||||| |||||||||||||||||||||| |||||||||| || || || |||||||||||    
T  45402202 gtcccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaa 45402104  T
Q  106 caactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||| ||||    
T  45402103 caactttaccagttgcgccaaggtta 45402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10668342 - 10668203
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||  |||||| ||||||  |||||||||||||||||||||| ||||||||||||| ||||||||    
T  10668342 cgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtc 10668243  T
Q  97 -----acatgacaacaactttaccagttgcgccaatgtta 131  Q
         |||||||||||||||||||||||||||||| ||||    
T  10668242 acatcacatgacaacaactttaccagttgcgccaaggtta 10668203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 8197149 - 8197026
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||| |||||||| |||| |||||| || |||||| ||||||  |||||||||||  || |||||| ||||||||||||| |||||||||||||||||||    
T  8197149 gtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaaca 8197050  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    |||| ||||||||| |||| ||||    
T  8197049 acttgaccagttgcaccaaggtta 8197026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27474395 - 27474275
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || |||||||||||   |||| |||||||||  || ||||||||| ||||||||| ||||||||| || ||||||| ||||| |||||||||||    
T  27474395 cgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcaca 27474296  T
Q  100 tgacaacaactttaccagttg 120  Q
    |||||||||||||||||||||    
T  27474295 tgacaacaactttaccagttg 27474275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 25468315 - 25468421
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||| |||||||| |||| ||||||||  |||||||||  |||||||||||||| ||||||||||| |||||||| |||| ||||| |||||||||||||    
T  25468315 gtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaaca 25468414  T
Q  108 actttac 114  Q
    |||||||    
T  25468415 actttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 35117829 - 35117927
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||| ||||| ||| ||||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 18742020 - 18742136
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttcc-aggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    |||| |||| ||||||||| |||||||||||||   | |||| || |||||||| | ||||||||||| |||| ||||||||||||||||||||||||||    
T  18742020 tttggtgtattgtacgcagccttaccctgtttttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttac 18742119  T
Q  115 cagttgcgccaatgtta 131  Q
    |||||||||||| ||||    
T  18742120 cagttgcgccaaggtta 18742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 34679274 - 34679388
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaact 110  Q
    |||||||||| ||||  ||||||||||||||||||||||  |||||||||| |||||| |||| | ||||  |||| |||||||||||||||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtcacatgacaataact 34679373  T
Q  111 ttaccagttgcgccaa 126  Q
    ||||| ||||||||||    
T  34679374 ttacc-gttgcgccaa 34679388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||| ||||||||| |||||||||||||  ||||||||||||||||| |||| |||||||| ||||  ||||||||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 22327185 - 22327088
Alignment:
Q  30 gtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||| ||| |||||||||||||  |||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||| || ||||||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttgcc-gttgcgccaa 22327088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 25290231 - 25290146
Alignment:
Q  48 ttttacacaagaggctgt--ttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||  ||||| || |||||| |||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  25290231 ttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggtta 25290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 34714675 - 34714606
Alignment:
Q  62 ctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggtta 34714606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19932796 - 19932922
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||| |  |||| ||||||||| |||||||||||||  |||||| ||| ||| ||||  | |||||||| |||| ||||||||    
T  19932796 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa-aggttgtatcca--acttgaacccatgacctttcagtc 19932892  T
Q  97 acatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||||||||||    
T  19932893 acatgacaacaactttaccagttgcgccaa 19932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44485152 - 44485267
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || |||| |||||||| |||| ||||||||| |||||| |||  |||||||||| || ||||||||||| |  |||||||||| ||||| ||||    
T  44485152 cgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcac 44485251  T
Q  99 atgacaacaactttac 114  Q
    ||||||||||||||||    
T  44485252 atgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 2435985 - 2436052
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||||| |||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 50760299 - 50760385
Alignment:
Q  31 tacgcagtcttaccctgtttta--cacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||| ||||||| ||||||  ||||||||||||||| ||||| ||||||||||||| | |||||||||||||||| ||||||||    
T  50760299 tacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 9939521 - 9939443
Alignment:
Q  54 acaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac-tttaccagttgcgccaatgtta 131  Q
    |||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||| |||||| |||||||||| ||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 19701636 - 19701570
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    |||||||||||||||||||| || || || |||||||||||||||||||||| ||||||||||||||    
T  19701636 ttttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 31272429 - 31272522
Alignment:
Q  12 cccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgaca 104  Q
    ||||||||||| |||  ||||||||| |||||| |||||| |||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 40424786 - 40424725
Alignment:
Q  70 aggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggtta 40424725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 52910319 - 52910216
Alignment:
Q  15 accatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||| | |||| ||||| ||||| |||||||||||   ||  ||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||    
T  52910319 accattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactt 52910220  T
Q  112 tacc 115  Q
    ||||    
T  52910219 tacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 50812037 - 50811928
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||| |||| ||||||||  |||||||||||||   |||||||| |||||||||||||  |||  ||||||| |||||||||| ||||||||||||||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T
Q  116 agttgcgccaa 126  Q
     ||||||||||    
T  50811937 -gttgcgccaa 50811928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 31382266 - 31382330
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgtttccagga 73  Q
    ||||||||||||| |||| ||||||||| |||| |||| ||||||||||||||||||||||||||    
T  31382266 gtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30682927 - 30682845
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccg 83  Q
    ||||| || |||||||||||||||||| ||||| || ||||||| |||||| |||||||||||| ||| |||||||||||||||    
T  30682927 cgggaaggggtcccaccatttgttgta-tgtacacaatcttaccttgtttttacacaagaggctattttcaggatttgaacccg 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35005240 - 35005139
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||| |  |||| |||| |||| |||||||||||||  |||||||||||||||| || || ||||||||||||| ||||||||    
T  35005240 cgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtc 35005141  T
Q  97 ac 98  Q
    ||    
T  35005140 ac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 22151568 - 22151495
Alignment:
Q  50 ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    ||||| |||||||||||||||| | |||||||  |||| || |||||| ||||||||||||||| |||||||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 15511226 - 15511320
Alignment:
Q  33 cgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||| |||||||||||||  ||||||||||| |||||||||| || ||   ||||| |||||| ||||| ||||||||||||||| |||||||||    
T  15511226 cgcagccttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca-ttgcgccaa 15511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 18335340 - 18335463
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||||| |||||| |||| ||||||||   |||||||   ||||| ||||||| |||||||||||| || |||  ||||| |||||| |||||||||| |    
T  18335340 gtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaa 18335439  T
Q  108 actttaccagttgcgccaatgtta 131  Q
    |||||| || ||||||||| ||||    
T  18335440 actttatcacttgcgccaaggtta 18335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 10163825 - 10163742
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| |||||| ||||| ||| | || |||  || |||||| || |||||||||||||||||| |||||||||||||||||    
T  10163825 ttttacataagaggttgttttcagaacttaaacttgtaacattttagccacatgacaacaactttatcagttgcgccaatgtta 10163742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 10378787 - 10378884
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| | ||        ||||||||| |||||||||| || |||||||||| ||||||||||    
T  10378787 gtcccaccatttggtgtattgtacgcagccttaccctgtttt-ctcac-------tttccaggacttgaacccgtaacctttcagtcacgtgacaacaac 10378878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 24564445 - 24564327
Alignment:
Q  15 accatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaacttt 112  Q
    |||||||| || | ||||||||  |||||||||||||  |||||||||| |||||||| || ||||| | | ||| ||||| ||||| |||| |||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaacttt 24564346  T
Q  113 accagttgcgccaatgtta 131  Q
    ||  |||||||||| ||||    
T  24564345 actggttgcgccaaggtta 24564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 25554817 - 25554891
Alignment:
Q  51 tacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||| ||||||||||| || ||| |||| | ||| |||||| ||||||||||||||||| |||||||||    
T  25554817 tacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacca-ttgcgccaa 25554891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 35019336 - 35019219
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| |||| |||| ||||  |||  ||||| |||||||| ||||| ||||| ||||| | ||||| |||||||||  ||||||||    
T  35019336 gtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaaca 35019237  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  35019236 actttacc-gttgcgccaa 35019219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 21723727 - 21723658
Alignment:
Q  50 ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 120  Q
    |||||||||||||||||||||||| | ||||  || ||  | |||||||||||||||||||||||||||||    
T  21723727 ttacacaagaggctgtttccaggact-gaacttgtaaccatccagtcacatgacaacaactttaccagttg 21723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 44745856 - 44745901
Alignment:
Q  29 tgtacgcagtcttaccctgttttacacaagaggctgtttccaggat 74  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||    
T  44745856 tgtacgcagctttaccttgttttacacaagaggctgtttccaggat 44745901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 22324989 - 22324925
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaaccc 82  Q
    |||| |||| |||| |||| ||||||||||||| ||||||||||||||||||| || ||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 14987990 - 14988084
Alignment:
Q  29 tgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 121  Q
    ||||||||| |||| |||||  |||||| ||||  |||||| ||||| ||||||  ||||| ||  ||||| |||||||||||||||||||||||    
T  14987990 tgtacgcagccttatcctgtattttacataagatactgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttaccagttgc 14988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15505679 - 15505632
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgt 48  Q
    ||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  15505679 cgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 28894646 - 28894689
Alignment:
Q  71 ggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||    
T  28894646 ggatttgaacaggtgacttttcagtcacatgacaacaactttac 28894689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4349753 - 4349703
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt 51  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||    
T  4349753 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 23371190 - 23371124
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    |||||| |||| ||||||||| |||| ||||||||||||| |||||||||   || |||||||||||    
T  23371190 ttttacccaagtggctgtttctaggacttgaacccgtgacctttcagtcatgcgaaaacaactttac 23371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 43768210 - 43768168
Alignment:
Q  62 ctgtttccaggatttgaacccgtgacatttcagtcacatgaca 104  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  43768210 ctgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 27136703 - 27136811
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| ||||||||  |||||| ||||||  |||||||||| |||| |||| | |||||| |||| | || || |||| |||||||    
T  27136703 gtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgacaac 27136802  T
Q  107 aactttacc 115  Q
    |||||||||    
T  27136803 aactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 39215030 - 39215117
Alignment:
Q  29 tgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||||||| ||||||| |||||  |||||||||| ||||||||| | ||||||  | ||| ||| |||||| |||||| ||||||||    
T  39215030 tgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaataactttac 39215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 46859175 - 46859131
Alignment:
Q  8 gagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt 51  Q
    |||||||||||||| | |||| |||||||||||||||||||||||    
T  46859175 gagtcccaccattttggtgtattgtacgcagtcttaccctgtttt 46859131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10093 - 10223
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  10093 cgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10192  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||| ||| ||||    
T  10193 gacaacaactttaccagttgcgtcaaggtta 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20421 - 20551
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20421 cgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 20520  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||| ||| ||||    
T  20521 gacaacaactttaccagttgcgtcaaggtta 20551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 8961 - 8905
Alignment:
Q  75 ttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  8961 ttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggtta 8905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 19289 - 19233
Alignment:
Q  75 ttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  19289 ttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggtta 19233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30669 - 30539
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  30669 cgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacacaagaggctgtttccaggacttgaaccggtgacctttcagtcacat 30570  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  30569 gacaacaactttaccagttgcgccaaggtta 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8170027 - 8170157
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |||||||    
T  8170027 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacat 8170126  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  8170127 gacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35710403 - 35710273
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| || |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  35710403 cgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacat 35710304  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  35710303 gacaacaactttaccagttgcgccaaggtta 35710273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 41014401 - 41014279
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  41014401 gtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 41014302  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||| ||||    
T  41014301 ctttaccagttgcgccaaggtta 41014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 37024627 - 37024729
Alignment:
Q  29 tgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatg 128  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |    
T  37024627 tgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaagg 37024726  T
Q  129 tta 131  Q
    |||    
T  37024727 tta 37024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24448982 - 24448850
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||| ||||  |||||| ||||||||||||||| ||||||||||||| || |||||||    
T  24448982 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcac 24448883  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||| ||||    
T  24448882 atgacaacaactttaccagttgcgccaaggtta 24448850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 38879675 - 38879541
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  | |||||||||||||||||||| ||||||||||||| ||||||||    
T  38879675 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtc 38879576  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  38879575 acatgacaacaactttaccagttgcgccaaggtta 38879541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32703514 - 32703411
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  32703514 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 32703415  T
Q  101 gaca 104  Q
    ||||    
T  32703414 gaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43334297 - 43334162
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagt 95  Q
    ||||| || |||||||||||| |  |||| ||||||||| |||||||||||||   ||||| |||||||||||||||| ||||||||||||| |||||||    
T  43334297 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagt 43334198  T
Q  96 cacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||||||| ||||    
T  43334197 cacatgacaacaactttaccagttgcgccaaggtta 43334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4619147 - 4619281
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||| ||||||||| ||||||||||||| || |||||    
T  4619147 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtc 4619246  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  4619247 acatgacaacaactttaccagttgcgccaaggtta 4619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27328846 - 27328712
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  ||||||||| |||||||||||| ||||||| ||||| ||||||||    
T  27328846 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtc 27328747  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||| ||||| ||| ||||    
T  27328746 acatgacaacaactttaccaattgcgtcaaggtta 27328712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19142986 - 19143111
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||| ||| ||||| ||||||     
T  19142986 cgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaacctgtggcattttagtcacg 19143085  T
Q  100 tgacaacaactttaccagttgcgccaa 126  Q
    ||||||||| ||||||| |||||||||    
T  19143086 tgacaacaattttacca-ttgcgccaa 19143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 1565474 - 1565391
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||| ||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  1565474 ttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 1565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 22187359 - 22187245
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| |||||||||||||| | ||||||  |||||||||||||||||||||| || |||| ||||| ||||||||| |||||||||||||||| |    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttacta 22187260  T
Q  117 gttgcgccaatgtta 131  Q
    |||||||||| ||||    
T  22187259 gttgcgccaaagtta 22187245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 22861721 - 22861841
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac 109  Q
    ||||||||||||| |||| |||  ||||||||||  ||||||||||||||| ||| ||| |||| ||||| ||||||| |||||||||||||||||||||    
T  22861721 gtcccaccatttgatgtattgtgagcagtcttact-tgttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaac 22861819  T
Q  110 tttaccagttgcgccaatgtta 131  Q
    |||| |||||| ||||| ||||    
T  22861820 tttatcagttgtgccaaggtta 22861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 23974823 - 23974741
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||    
T  23974823 ttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggtta 23974741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 2838860 - 2838738
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacattt-cagtcacatgacaacaa 108  Q
    |||||||||||| |||| ||||||||| ||||||||||||| |||||||| ||||||||   || |||| | |||||| ||| |||||||||||||||||    
T  2838860 tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaa 2838761  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    ||||||| |||||||||| ||||    
T  2838760 ctttaccggttgcgccaaggtta 2838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30006417 - 30006285
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||  |||||||||| ||| |||||||||||  ||| | |||||| ||||| | ||| ||||| |  |||| ||||||||||    
T  30006417 cgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggttgttttccggacttgaatctatgacctttcagtcac 30006318  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||| |||| |||||||||||||||||    
T  30006317 atgacaacaaatttatcagttgcgccaatgtta 30006285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 31299705 - 31299592
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgttttac-acaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccag 117  Q
    |||| |||| |||||||||| |||| ||||||||  ||||||||||||||| |||| ||||||  ||||| | | |||||||||||||||||||||||||    
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccag 31299606  T
Q  118 ttgcgccaatgtta 131  Q
    |||| |||| ||||    
T  31299605 ttgcaccaaggtta 31299592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7368488 - 7368416
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccagga 73  Q
    ||||| || ||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  7368488 cgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccagga 7368416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 22600536 - 22600426
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||||||||| |||| ||||| ||| ||||||||||  ||||||||| |   ||||||||||| |||||||||| || || ||||||||||| |||||    
T  22600536 tcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaa 22600437  T
Q  109 ctttaccagtt 119  Q
    |||||||||||    
T  22600436 ctttaccagtt 22600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 1850722 - 1850624
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||  ||||  ||||||| |||||||||| | ||||| ||| ||||||||||||| |||||||||||||||||||    
T  1850722 gtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 39301177 - 39301089
Alignment:
Q  39 cttaccctgtttta--cacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||  ||||||||| |||| ||| || ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  39301177 cttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaa 39301089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 28516485 - 28516593
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| ||||||||| | || ||||||||  |||||||||| |||||||| || ||||||||||||| |||||| ||| |||||||    
T  28516485 gtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaac 28516584  T
Q  107 aactttacc 115  Q
    |||||||||    
T  28516585 aactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 208979 - 209086
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||||||||||| | |||| || | |||| ||||||||||||| |||||||||| |||| |||||| ||||||  ||||| ||| |||||||||||||||    
T  208979 gtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaaca 209078  T
Q  108 actttacc 115  Q
    ||||||||    
T  209079 actttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22907917 - 22908014
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||| |||| |||  ||||| ||||||| |||||||||||||||||  ||| |||||||| |||| |||||||||||| |||||    
T  22907917 gtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 12006422 - 12006500
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaaccc-gtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||| |||||| ||||||||| | |||||||| ||||| ||||||||||||||||||||||| | ||||||||||||    
T  12006422 ttttacataagaggttgtttccag-acttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 1405270 - 1405170
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||  ||||| || ||||  | | |||||| ||||||||||| ||||||||||||| ||  |||||||||||||||    
T  1405270 gtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaaca 1405171  T
Q  108 a 108  Q
    |    
T  1405170 a 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 17419944 - 17419879
Alignment:
Q  61 gctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||| |||||| ||| || |||||||||||| ||||||| |||||||||| ||||||    
T  17419944 gctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgccaa 17419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 39079875 - 39079935
Alignment:
Q  65 tttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||||| || ||||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaa 39079935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43574698 - 43574610
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggatttgaacccgtgac 87  Q
    ||||| || ||||||||||||| | || ||||||||| ||||||||||||  ||||||||||  ||||||||||| |||||| ||||||    
T  43574698 cgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgac 43574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 22025586 - 22025538
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  22025586 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13801810 - 13801895
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaaccc 82  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  ||||||||||||| |||||||| ||||||||    
T  13801810 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 34074654 - 34074717
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    ||||||||||||||||||||| |||| ||||||  ||||| |||||||||  ||||||||||||    
T  34074654 ttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 10634238 - 10634315
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    |||| |||| |||| |||||| |||| |||||||| |||| |||||||||| |||||||||||| ||| ||||||||||    
T  10634238 ttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgccaa 10634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 24323757 - 24323862
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||| |||||  ||| | ||||||  ||||||||||  ||||||||||||| ||||||||| | ||||||   |||||||||||||||| || ||||    
T  24323757 gtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtcacacgataaca 24323856  T
Q  108 acttta 113  Q
    ||||||    
T  24323857 acttta 24323862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 24360381 - 24360486
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||| |||||  ||| | ||||||  ||||||||||  ||||||||||||| ||||||||| | ||||||   |||||||||||||||| || ||||    
T  24360381 gtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtcacacgataaca 24360480  T
Q  108 acttta 113  Q
    ||||||    
T  24360481 acttta 24360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 41426031 - 41425948
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacattt 91  Q
    ||||||||| ||| |||| |||| |||| |||||||||||||  |||||| | | ||||||||| | |||||||||||||||||    
T  41426031 gtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgacattt 41425948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 41956924 - 41956892
Alignment:
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||||||    
T  41956924 atgacaacaactttaccagttgcgccaatgtta 41956892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7097803 - 7097870
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgttt 67  Q
    ||||| || ||| ||||||||| |||| ||||||||  ||||||||| ||||||||||||||||||||    
T  7097803 cgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 16880703 - 16880757
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtt 66  Q
    ||||||||| |||| ||||||||| |||||||||  |||||||||||||||||||    
T  16880703 caccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    |||| |||| ||||||||  |||||||||||||  |||||||| | ||||| ||||| |||||| |||||| |||||||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 19438747 - 19438709
Alignment:
Q  93 agtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  19438747 agtcatatgacaacaactttaccagttgcgccaaggtta 19438709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 31362453 - 31362495
Alignment:
Q  74 tttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  31362453 tttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20135698 - 20135623
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccagg 72  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||| ||||||  |||||||||||||||||||||    
T  20135698 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 29334479 - 29334415
Alignment:
Q  10 gtcccaccatt-tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccag 71  Q
    ||||||||||| || |||| ||||||||| |||||| ||||||  ||||||||||||||||||||    
T  29334479 gtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 5873371 - 5873435
Alignment:
Q  7 ggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttcca 70  Q
    |||||||||||| ||| |||| |||||  || |||||||| |||| |||||||||||||||||||    
T  5873371 ggagtcccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgtttcca 5873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1217202 - 1217072
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  1217202 cgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtgacat 1217103  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    ||| |||||||||||||||||||||| ||||    
T  1217102 gactacaactttaccagttgcgccaaggtta 1217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 7696945 - 7697060
Alignment:
Q  16 ccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgttttacacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 7697044  T
Q  116 agttgcgccaatgtta 131  Q
    ||||||||||| ||||    
T  7697045 agttgcgccaaggtta 7697060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22122960 - 22123090
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  22122960 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagactgtttccaggacttgaacccgcgacctttcagtcacat 22123059  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||| ||||||||| ||||||| ||||    
T  22123060 gacaacaaatttaccagtggcgccaaggtta 22123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8247730 - 8247864
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| ||||||||||||||  || |||| ||||||||  |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||    
T  8247730 cgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtc 8247829  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  8247830 acatgacaacaactttaccagttgcgccaaggtta 8247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 26869811 - 26869691
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  26869811 gtcccaccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 26869712  T
Q  109 ctttaccagttgcgccaatgt 129  Q
    |||||||||||||||| ||||    
T  26869711 ctttaccagttgcgccgatgt 26869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 16735554 - 16735423
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttac-acaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| | ||||||||||||||| |||| ||||||||||||| || ||||||||    
T  16735554 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcaca 16735455  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||||||| ||||    
T  16735454 tgacaacaactttaccagttgcgccaaggtta 16735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39203628 - 39203498
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||    
T  39203628 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacat 39203529  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||||| ||||| ||||    
T  39203528 gacaacaactttacaagttgtgccaaggtta 39203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 10870025 - 10870126
Alignment:
Q  31 tacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgt 129  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 10870124  T
Q  130 ta 131  Q
    ||    
T  10870125 ta 10870126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40272855 - 40272987
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||  |||||||||| ||||||||||| |||||||| |||| || |||||||    
T  40272855 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcac 40272954  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||| ||||    
T  40272955 atgacaacaactttaccagttgcgccaaggtta 40272987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 46421078 - 46421212
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||| ||||    
T  46421078 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtc 46421177  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  46421178 acatgacaacaactttaccagttgcgccaaggtta 46421212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13730645 - 13730779
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||| ||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| || |||||    
T  13730645 cgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtc 13730744  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||||| ||||    
T  13730745 acatgacaacaactttaccagttgcgccaaggtta 13730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22609879 - 22609749
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcaca 99  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||| || |||||||||| || || ||||||||    
T  22609879 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcaca 22609780  T
Q  100 tgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||| |||||||||| ||||    
T  22609779 tgacaacaactttacc-gttgcgccaaggtta 22609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13628833 - 13628968
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  13628833 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtc 13628932  T
Q  97 acatgacaacaac-tttaccagttgcgccaatgtta 131  Q
    ||||||||||||| ||||||||||| ||||| ||||    
T  13628933 acatgacaacaacttttaccagttgtgccaaggtta 13628968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 4495716 - 4495831
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |||| ||||||||| |||||||||||||  |||||| ||||| ||| ||||| ||||||||||||| || ||||||||||||||||    
T  4495716 gtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaaca 4495815  T
Q  108 actttaccagttgcgc 123  Q
    ||||||||||||||||    
T  4495816 actttaccagttgcgc 4495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26573241 - 26573115
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||| ||| |||| ||||||||| |||||||||||||  ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  26573241 cgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcac 26573142  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
     |||||||||||||||| ||||||||||    
T  26573141 gtgacaacaactttacc-gttgcgccaa 26573115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29366763 - 29366897
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtc 96  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  | |||||||||||||||||||| ||||||||||||| ||| ||||    
T  29366763 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtc 29366862  T
Q  97 acatgacaacaactttaccagttgcgccaatgtta 131  Q
    ||||||||||||||||||||||| |||||| ||||    
T  29366863 acatgacaacaactttaccagttacgccaaggtta 29366897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 52926262 - 52926385
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||       ||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  52926262 cgggaaggtgtcccaccatttggtgtattgtacgcagccttac-------tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 52926354  T
Q  101 gacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||| ||||    
T  52926355 gacaacaactttaccagttgcgccaaggtta 52926385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 12914091 - 12914210
Alignment:
Q  14 caccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    ||||||||| |||| ||||||| | |||||||||||||  |||||||||||||||||||||| ||||||  ||||| |||| ||||||| ||||||||||    
T  12914091 caccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactt 12914190  T
Q  112 taccagttgcgccaatgtta 131  Q
    ||||||||||||||| ||||    
T  12914191 taccagttgcgccaaggtta 12914210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 45620881 - 45620998
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    |||||||| ||| |||| ||||||||| |||||||||||||   |||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  45620981 actttacc-gttgcgccaa 45620998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31592961 - 31592878
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgt 84  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  31592961 cgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 6411874 - 6411996
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||| |||||| |||| ||||||||| ||||||||||||| |||||||||||||||| || || |||||||| |||| | ||||| ||||||||||||    
T  6411874 gtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaa 6411973  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||| ||||    
T  6411974 ctttaccagttgcgtcaaggtta 6411996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34420686 - 34420802
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || |||||||||||| | ||||  |||||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||    
T  34420686 cgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 34420785  T
Q  98 catgacaacaactttac 114  Q
    | |||||||||||||||    
T  34420786 cgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 9607287 - 9607185
Alignment:
Q  31 tacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatg 128  Q
    ||||||| |||||||||||||  || ||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||| ||||||||||| |    
T  9607287 tacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaagg 9607188  T
Q  129 tta 131  Q
    |||    
T  9607187 tta 9607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 7943094 - 7942993
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    |||||||||||| |||| |||||||||||||||||||||||  | |||||| ||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  7943094 tcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 7942995  T
Q  109 ct 110  Q
    ||    
T  7942994 ct 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 5173812 - 5173896
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaac-tttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  5173812 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggtta 5173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 35417981 - 35417904
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||| ||||||||||    
T  35417981 ttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgccaa 35417904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 516491 - 516417
Alignment:
Q  33 cgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa 105  Q
    ||||| |||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  516491 cgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 30928239 - 30928302
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  30928239 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 39212081 - 39211992
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||| |||||||||||||||| ||||  |||||||||||| | ||||||||| |||||||||||||||||||||||||| || |||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 33235637 - 33235526
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg---ttttacacaagaggctgtttccaggatttgaacccgtgacatttca-gtcacatgacaa 105  Q
    ||||||||||||  |||| ||||| |||||||||||||   |||||||||||||||| ||| || |||||||||  ||||| ||||| ||||||||||||    
T  33235637 gtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaa 33235538  T
Q  106 caactttaccag 117  Q
    ||||||||||||    
T  33235537 caactttaccag 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  41 taccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacc 115  Q
    |||||||||||  ||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 12525489 - 12525392
Alignment:
Q  33 cgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtt 130  Q
    ||||| |||||||||  |||||||||||||||||||||||||| | ||||| ||||| ||||||||| |||   |||||||||||||||||||||| |||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgccaaggtt 12525393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 54032611 - 54032705
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatga 102  Q
    ||||||||||| | |||| |||| |||| |||||||||||||  |||||||||| ||||||||||| ||||||||||||| || |||||||||||    
T  54032611 gtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 33926188 - 33926094
Alignment:
Q  10 gtcccaccatt-tgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatga 102  Q
    ||||||||||| || |||| ||||| ||| ||||||||||||| |||||||||||| ||||||||| |||||||| |||| ||||||||||||||    
T  33926188 gtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 53996617 - 53996725
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    |||||||||||| | |||| |||| |||| |||||||||||||  |||||||||| |||||||| || |||||| |||||| ||||||||| ||||||||    
T  53996617 gtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaac 53996716  T
Q  107 aactttacc 115  Q
    || ||||||    
T  53996717 aaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 45948890 - 45949010
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacat---ttcagtcacatgaca 104  Q
    ||||||||| ||| |||| |||| |||| |||||||| ||||  |||||||||| ||||||||||| ||||||||||||| |   ||||||||||||| |    
T  45948890 gtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgaccttccttcagtcacatgaaa 45948989  T
Q  105 acaactttaccagttgcgccaa 126  Q
    ||||||| ||| ||||||||||    
T  45948990 acaacttcacc-gttgcgccaa 45949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15797334 - 15797271
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctg 64  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  15797334 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 21875105 - 21875002
Alignment:
Q  24 tgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 120  Q
    |||| ||||||||| |||||||| ||||   |||||||||| ||||||||| ||||||||||||       |||||||||||||||||||||||||||||    
T  21875105 tgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgt-------cagtcacatgacaacaactttaccagttg 21875013  T
Q  121 cgccaatgtta 131  Q
    || ||| ||||    
T  21875012 cgtcaaggtta 21875002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 25944534 - 25944468
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    |||||||| |||||| |||||||||| |||||||| |||| |||||||||| |||||||||||||||    
T  25944534 ttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtg 85  Q
    |||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 47624155 - 47624088
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg-ttttacacaagaggctgttt 67  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  47624155 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 28905041 - 28904941
Alignment:
Q  18 atttgttgtaatgtacgcagtcttaccctgtt---ttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    ||||| |||||||||| |||||||||| ||||   ||||||||||| ||||| || ||| || |||  ||||| ||| ||||||||||||||||||||||    
T  28905041 atttggtgtaatgtacacagtcttaccttgttattttacacaagagactgttccctggacttaaacatgtgactttttagtcacatgacaacaactttac 28904942  T
Q  115 c 115  Q
    |    
T  28904941 c 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 45139539 - 45139624
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatga 102  Q
    |||| |||| |||| |||| ||||||||||  ||||||||||||| ||||||||  | ||||||||||||| ||||||||||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 8410919 - 8411016
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| ||| |||| |||  |||| |||||||||||||  ||| ||||| ||||||||||  |||||| ||||| |||||||| ||||||||||    
T  8410919 gtcccaccagttggtgtattgtgagcagccttaccctgttttttacacgaggcagtttccaggacctgaaccggtgacctttcagtcccatgacaaca 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 14987064 - 14986989
Alignment:
Q  10 gtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacc 81  Q
    |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||||| |||||||    
T  14987064 gtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 25517300 - 25517349
Alignment:
Q  83 gtgacatttcagtcacatgacaacaactttaccagttgcgccaatgttat 132  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  25517300 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttat 25517349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54484805 - 54484730
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctg---ttttacacaagaggctgtttccagga 73  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||| ||   ||||||||||||||||||||||||||    
T  54484805 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 19731107 - 19731000
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| | | |||| ||||||||  |||||| ||||||  |||||||||||| ||||||||| ||| | ||||||| ||||| |||| ||||||||    
T  19731107 gtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaca 19731008  T
Q  108 actttacc 115  Q
    | ||||||    
T  19731007 aatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 31831297 - 31831241
Alignment:
Q  15 accatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccag 71  Q
    |||||||| |||| |||| |||| |||||||| ||||||||||||||||||||||||    
T  31831297 accatttggtgtattgtatgcagccttaccctattttacacaagaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 26782431 - 26782348
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||  |||||| |||| ||||| ||||||| ||||| || |||||||| |||||||||| ||||| ||| ||||    
T  26782431 ttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgtcaaggtta 26782348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 31904909 - 31904974
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccagga 73  Q
    ||||||||||||| |||| ||||||||||| |||||||  ||||||| || |||||||||||||||    
T  31904909 gtcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtttccagga 31904974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34771407 - 34771461
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacac 55  Q
    ||||| || ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  34771407 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 34771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 52428532 - 52428616
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctgt--tttacacaagaggctgtttccag-gatttgaacccgtgacatttcag 94  Q
    |||| ||||| |||| ||||||||| ||||||||||  |||||||||||||||| |||||| || || |||||||||| ||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttcag 52428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 54374388 - 54374488
Alignment:
Q  1 cgggacggagtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtca 97  Q
    ||||| || |||||||||||| | || | ||||||||| |||||||| ||||  |||||||||| |||||||| || ||||||| ||||| |||||||||    
T  54374388 cgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctttcagtca 54374487  T
Q  98 c 98  Q
    |    
T  54374488 c 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 19751683 - 19751576
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||| | | |||| ||||||||  |||||| ||  |||||||||||||||| ||||||||| ||| | ||||||| ||||| |||| |||||| |    
T  19751683 gtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaaa 19751584  T
Q  108 actttacc 115  Q
    | ||||||    
T  19751583 aatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 26292434 - 26292382
Alignment:
Q  11 tcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggct 63  Q
    ||||| |||||| ||||  |||||| |||||||||||||||||||||||||||    
T  26292434 tcccatcatttggtgtatcgtacgcggtcttaccctgttttacacaagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49013516 - 49013589
Alignment:
Q  1 cgggacggagtcccaccatt--tgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttcca 70  Q
    ||||| || |||||||||||  || |||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  49013516 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 55401282 - 55401208
Alignment:
Q  10 gtcccaccattt-gttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacc 81  Q
    |||||||||||| | |||| | |||||||||||| ||||||||  |||||||||||||||| ||||| |||||||    
T  55401282 gtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 9276366 - 9276313
Alignment:
Q  13 ccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctg 64  Q
    |||||||||| |||| ||||||||| |||||||||  |||||||||||||||||    
T  9276366 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 43956552 - 43956629
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 126  Q
    ||||||||| |||||||||||||| |  |||||||  ||| |||||||||  | |||||||||||||| ||||||||||    
T  43956552 ttttacacatgaggctgtttccagaacatgaaccccggacttttcagtcaagtaacaacaactttacc-gttgcgccaa 43956629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 31672800 - 31672733
Alignment:
Q  8 gagtcccaccatttgttgtaatgtacgcagtcttaccctg--ttttacacaagaggctgtttccagga 73  Q
    ||||||||||||||| |||| |||||||| |||| || ||  ||||||| || |||||||||||||||    
T  31672800 gagtcccaccatttggtgtattgtacgcactcttgccttgttttttacataataggctgtttccagga 31672733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 43114962 - 43114994
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaac 80  Q
    |||||||||||||||||||||||||| ||||||    
T  43114962 ttttacacaagaggctgtttccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45786257 - 45786327
Alignment:
Q  1 cgggacggagtcccaccatttgt--tgtaatgtacgcagtcttaccctg--ttttacacaagaggctgttt 67  Q
    ||||| || |||||||||||| |  |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  45786257 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11221 - 11097
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || ||||||||||||| |||| |||| |||| |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  11221 cgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 11122  T
Q  101 gacaacaactttaccagttgcgccaa 126  Q
     | |||||||||||||||||||||||    
T  11121 -agaacaactttaccagttgcgccaa 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 13076 - 13198
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaa 108  Q
    ||||||||||| | |||| ||||||||| |||||| |||||| || ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  13076 gtcccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaa 13175  T
Q  109 ctttaccagttgcgccaatgtta 131  Q
    ||||||| |||||||||| ||||    
T  13176 ctttaccggttgcgccaaggtta 13198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 226457 - 226581
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaac 106  Q
    ||||||||||||| |||| |||| |||| |||||||||||||   | ||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||    
T  226457 gtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaac 226556  T
Q  107 aactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||| ||||    
T  226557 aactttaccagttgcgccaaggtta 226581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 59051 - 58937
Alignment:
Q  19 tttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttacca 116  Q
    |||| |||| |||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||    
T  59051 tttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacca 58952  T
Q  117 gttgcgccaatgtta 131  Q
    ||||| |||| ||||    
T  58951 gttgctccaaggtta 58937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 1630 - 1751
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacat 100  Q
    ||||| || |||||| |||||| |||| |||| |||| |||| |||||||||||||||||| ||||| ||||| |||||||| |||| ||||||||||||    
T  1630 cgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttttacacaagaggttgttttcaggacttgaacccatgacctttcagtcacat 1729  T
Q  101 gacaacaactttaccagttgcg 122  Q
    |||||||||||||||| |||||    
T  1730 gacaacaactttaccaattgcg 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24815 - 24942
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||  ||||||||| |||||||||||||  |||||||||||||||     || |||||||| |||| ||||||||||    
T  24815 cgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcac 24909  T
Q  99 atgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||||||||||||||||| ||||    
T  24910 atgacaacaactttaccagttgcgccaaggtta 24942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46923 - 46796
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| ||||||||  |||||||| ||||  |||||||||| ||||||||| | ||||||||||||| ||  ||||||    
T  46923 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcac 46824  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
    |||||||||||||||||| |||||||||    
T  46823 atgacaacaactttaccaattgcgccaa 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 43740 - 43679
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttccag 71  Q
    ||||||||||||| |||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  43740 gtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagacgctgtttccag 43679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 46995 - 47041
Alignment:
Q  68 ccaggatttgaacccgtgacatttcagtcacatgacaacaactttac 114  Q
    |||||| |||||| |||||| |||||||||| |||||||||||||||    
T  46995 ccaggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 35069 - 35195
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaa- 105  Q
    ||||||||||||| |||| ||||||||| |||||||||||||   ||||||||| |||||| ||||| ||||||||||||| || ||||||||||||||     
T  35069 gtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaat 35168  T
Q  106 caactttaccagttgcgccaatgttat 132  Q
     ||||||||||||||| |||| |||||    
T  35169 aaactttaccagttgcaccaaagttat 35195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10902 - 10775
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcac 98  Q
    ||||| || ||||||||||||| |||| || |||||| | |||||||||||  |||||||||| ||||| |||   ||||||||||||| || |||||||    
T  10902 cgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcac 10803  T
Q  99 atgacaacaactttaccagttgcgccaa 126  Q
    ||||||||||||||||||||||| ||||    
T  10802 atgacaacaactttaccagttgcaccaa 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 4200 - 4125
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48677 - 48746
Alignment:
Q  1 cgggacggagtcccaccatttgttgtaatgtacgcagtcttaccctgttttacacaagaggctgtttcca 70  Q
    ||||| || ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  48677 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttcca 48746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 83903 - 83835
Alignment:
Q  63 tgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtta 83835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 43172 - 43097
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 123  Q
    ||||||||||||||||||||| ||||  ||||| |||||| ||||| ||||||||||| |||||||||||||||||    
T  43172 ttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgc 43097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 8934 - 8865
Alignment:
Q  48 ttttacacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccag 117  Q
    |||||||||||| | ||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||    
T  8934 ttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 24695 - 24624
Alignment:
Q  60 ggctgtttccaggatttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaatgtta 131  Q
    |||||||||||||| ||||||||||||| || ||||||| |||||||||||||| || ||| ||||| ||||    
T  24695 ggctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggtta 24624  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 72924 - 73031
Alignment:
Q  15 accatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggct-gtttccaggatttgaacccgtgacatttcagtcacatgacaacaactt 111  Q
    |||||||| |||| |||| |||| |||||| ||||||  ||||||||| || ||||| |||| ||||||||||||||       ||||||||||||||||    
T  72924 accatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgaca-------cacatgacaacaactt 73016  T
Q  112 taccagttgcgccaa 126  Q
    |||||||||||||||    
T  73017 taccagttgcgccaa 73031  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 23682 - 23569
Alignment:
Q  10 gtcccaccatttgttgtaatgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggatttgaacccgtgacatttcagtcacatgacaaca 107  Q
    ||||||||||||| |  | ||||||||| || ||||||||||  |||||||||| ||||| || || ||||||||||  | ||||||||||||    |||    
T  23682 gtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcagtcacat----aca 23587  T
Q  108 actttaccagttgcgccaa 126  Q
    |||||||| ||||||||||    
T  23586 actttacc-gttgcgccaa 23569  T

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