View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5054-Insertion-4 (Length: 830)

Name: NF5054-Insertion-4
Description: NF5054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5054-Insertion-4
NF5054-Insertion-4
[»] chr6 (23 HSPs)
chr6 (204-830)||(8131323-8131945)
chr6 (627-703)||(2488839-2488914)
chr6 (627-705)||(23610271-23610349)
chr6 (626-706)||(7581083-7581164)
chr6 (627-698)||(4577741-4577812)
chr6 (627-704)||(7977097-7977175)
chr6 (627-705)||(17534887-17534965)
chr6 (623-660)||(20729037-20729074)
chr6 (627-660)||(29646500-29646533)
chr6 (623-706)||(3294803-3294887)
chr6 (629-705)||(34268322-34268398)
chr6 (710-753)||(2236821-2236864)
chr6 (634-705)||(16406609-16406680)
chr6 (628-706)||(18904304-18904383)
chr6 (628-706)||(32621534-32621613)
chr6 (624-706)||(1435848-1435930)
chr6 (626-660)||(3795724-3795758)
chr6 (626-660)||(7425452-7425486)
chr6 (624-705)||(32670002-32670084)
chr6 (627-705)||(32788806-32788884)
chr6 (665-706)||(5944465-5944506)
chr6 (626-706)||(22997375-22997456)
chr6 (626-706)||(23790945-23791026)
[»] chr4 (38 HSPs)
chr4 (623-706)||(44568167-44568250)
chr4 (627-703)||(27091425-27091500)
chr4 (710-779)||(12499068-12499138)
chr4 (710-779)||(36061070-36061140)
chr4 (710-778)||(44362966-44363035)
chr4 (710-777)||(18879294-18879362)
chr4 (626-706)||(43905749-43905829)
chr4 (629-705)||(51890837-51890913)
chr4 (710-779)||(1351320-1351390)
chr4 (627-705)||(2629619-2629697)
chr4 (710-779)||(6216250-6216320)
chr4 (631-705)||(29406397-29406471)
chr4 (627-705)||(31852389-31852467)
chr4 (627-705)||(40486481-40486559)
chr4 (626-668)||(45312207-45312249)
chr4 (626-706)||(4700888-4700969)
chr4 (626-706)||(10402480-10402561)
chr4 (626-706)||(30057261-30057342)
chr4 (626-706)||(17815376-17815456)
chr4 (629-705)||(23924826-23924902)
chr4 (629-705)||(49264566-49264642)
chr4 (627-691)||(51759611-51759675)
chr4 (628-706)||(30305838-30305917)
chr4 (628-706)||(36099135-36099214)
chr4 (627-705)||(11294790-11294868)
chr4 (626-660)||(13564218-13564252)
chr4 (626-660)||(37935947-37935981)
chr4 (627-705)||(38848072-38848150)
chr4 (626-660)||(48569126-48569160)
chr4 (639-677)||(49903649-49903687)
chr4 (626-706)||(2222578-2222659)
chr4 (623-656)||(10406976-10407009)
chr4 (627-700)||(28465726-28465799)
chr4 (626-706)||(40051661-40051742)
chr4 (630-706)||(41137874-41137951)
chr4 (627-668)||(46791160-46791201)
chr4 (626-706)||(55021593-55021674)
chr4 (626-706)||(55853058-55853139)
[»] chr2 (24 HSPs)
chr2 (710-779)||(35021026-35021095)
chr2 (627-706)||(23919429-23919508)
chr2 (634-705)||(3596290-3596361)
chr2 (627-705)||(13242683-13242761)
chr2 (710-779)||(40609863-40609933)
chr2 (644-705)||(1964393-1964454)
chr2 (626-706)||(11189967-11190048)
chr2 (626-706)||(15069749-15069830)
chr2 (626-706)||(32854571-32854652)
chr2 (633-706)||(40363029-40363102)
chr2 (787-826)||(40848550-40848589)
chr2 (627-705)||(1027585-1027663)
chr2 (627-705)||(20919650-20919728)
chr2 (627-701)||(22333819-22333893)
chr2 (626-660)||(29772228-29772262)
chr2 (626-660)||(38387741-38387775)
chr2 (626-660)||(41566848-41566882)
chr2 (623-656)||(4562699-4562732)
chr2 (627-660)||(17524923-17524956)
chr2 (626-706)||(18254628-18254709)
chr2 (627-660)||(25562609-25562642)
chr2 (626-706)||(30390319-30390400)
chr2 (626-706)||(33228883-33228964)
chr2 (627-656)||(35797977-35798006)
[»] chr3 (51 HSPs)
chr3 (628-706)||(15085636-15085715)
chr3 (710-779)||(25189603-25189673)
chr3 (626-706)||(3748552-3748633)
chr3 (626-706)||(29098731-29098811)
chr3 (623-706)||(45647342-45647426)
chr3 (710-779)||(39450673-39450743)
chr3 (627-705)||(47098556-47098634)
chr3 (634-706)||(2106063-2106136)
chr3 (626-706)||(25883938-25884019)
chr3 (629-705)||(24303430-24303506)
chr3 (627-705)||(38949714-38949792)
chr3 (643-705)||(49577409-49577471)
chr3 (627-668)||(9685073-9685114)
chr3 (632-705)||(46844928-46845001)
chr3 (626-706)||(48722283-48722364)
chr3 (629-705)||(28951756-28951832)
chr3 (623-706)||(30779514-30779598)
chr3 (629-705)||(32401531-32401606)
chr3 (626-706)||(40212410-40212490)
chr3 (623-706)||(52309060-52309141)
chr3 (628-706)||(27329884-27329963)
chr3 (634-705)||(35849521-35849592)
chr3 (628-706)||(41253701-41253780)
chr3 (628-706)||(46767382-46767461)
chr3 (628-706)||(51879134-51879213)
chr3 (627-705)||(4227696-4227774)
chr3 (627-705)||(5173962-5174040)
chr3 (626-660)||(6488210-6488244)
chr3 (626-660)||(17218574-17218608)
chr3 (627-705)||(19222538-19222616)
chr3 (626-660)||(22501881-22501915)
chr3 (627-705)||(27837306-27837383)
chr3 (626-660)||(33606890-33606924)
chr3 (626-660)||(34757602-34757636)
chr3 (710-779)||(38018301-38018371)
chr3 (710-779)||(38216288-38216358)
chr3 (627-705)||(41411579-41411657)
chr3 (626-660)||(44764520-44764554)
chr3 (627-705)||(48515337-48515415)
chr3 (627-705)||(49443375-49443453)
chr3 (710-779)||(49726456-49726525)
chr3 (627-705)||(54408502-54408580)
chr3 (626-706)||(5641564-5641645)
chr3 (623-656)||(7920410-7920443)
chr3 (673-706)||(13874860-13874893)
chr3 (626-706)||(39719974-39720055)
chr3 (628-704)||(41710624-41710701)
chr3 (626-706)||(41936357-41936438)
chr3 (626-706)||(46754567-46754648)
chr3 (623-660)||(49194639-49194676)
chr3 (626-706)||(53432687-53432768)
[»] chr1 (34 HSPs)
chr1 (627-705)||(1247295-1247373)
chr1 (626-705)||(33133881-33133961)
chr1 (626-704)||(49907321-49907400)
chr1 (643-705)||(621617-621679)
chr1 (710-779)||(15061503-15061572)
chr1 (627-705)||(17487566-17487644)
chr1 (710-779)||(42508308-42508378)
chr1 (710-779)||(44166511-44166581)
chr1 (627-668)||(24875048-24875089)
chr1 (630-705)||(39670784-39670859)
chr1 (626-705)||(50119012-50119091)
chr1 (710-779)||(38275810-38275880)
chr1 (626-706)||(51050229-51050310)
chr1 (627-706)||(23233990-23234070)
chr1 (626-705)||(16997210-16997289)
chr1 (630-705)||(23991219-23991294)
chr1 (629-660)||(37280786-37280817)
chr1 (626-660)||(7166177-7166211)
chr1 (626-660)||(11215087-11215121)
chr1 (626-660)||(18467148-18467182)
chr1 (626-660)||(19011441-19011475)
chr1 (626-660)||(22563472-22563506)
chr1 (627-705)||(33843147-33843225)
chr1 (627-705)||(33950754-33950832)
chr1 (643-685)||(43508667-43508709)
chr1 (626-660)||(45333662-45333696)
chr1 (626-660)||(45517218-45517252)
chr1 (626-660)||(50899453-50899487)
chr1 (626-706)||(6702615-6702696)
chr1 (627-660)||(7491846-7491879)
chr1 (627-700)||(11860087-11860160)
chr1 (626-706)||(21265695-21265776)
chr1 (623-656)||(32970748-32970781)
chr1 (628-705)||(36666529-36666606)
[»] chr7 (25 HSPs)
chr7 (626-706)||(21066925-21067005)
chr7 (710-779)||(42457389-42457459)
chr7 (623-706)||(13730045-13730128)
chr7 (643-706)||(23817227-23817290)
chr7 (627-705)||(27788309-27788387)
chr7 (627-705)||(27791465-27791543)
chr7 (626-706)||(15238928-15239009)
chr7 (710-779)||(20896474-20896543)
chr7 (711-779)||(44858023-44858092)
chr7 (623-706)||(3392506-3392590)
chr7 (626-660)||(9697841-9697875)
chr7 (627-693)||(12935792-12935858)
chr7 (626-660)||(13720856-13720890)
chr7 (627-701)||(15021163-15021237)
chr7 (626-660)||(19331450-19331484)
chr7 (626-660)||(27424924-27424958)
chr7 (629-706)||(32047128-32047206)
chr7 (626-656)||(35835649-35835679)
chr7 (626-660)||(48119556-48119590)
chr7 (626-660)||(48719885-48719919)
chr7 (626-706)||(16200598-16200679)
chr7 (626-706)||(24188509-24188590)
chr7 (624-705)||(25155581-25155662)
chr7 (626-706)||(31769462-31769543)
chr7 (627-668)||(47542929-47542970)
[»] scaffold0157 (1 HSPs)
scaffold0157 (710-779)||(21339-21409)
[»] scaffold0116 (1 HSPs)
scaffold0116 (631-705)||(16133-16207)
[»] chr8 (32 HSPs)
chr8 (710-779)||(3207815-3207885)
chr8 (710-779)||(38255358-38255428)
chr8 (627-705)||(38283164-38283242)
chr8 (710-776)||(24587293-24587360)
chr8 (628-706)||(37708730-37708809)
chr8 (710-784)||(39186354-39186429)
chr8 (629-706)||(8183359-8183437)
chr8 (626-706)||(16449164-16449245)
chr8 (626-706)||(23178841-23178922)
chr8 (626-706)||(5683793-5683873)
chr8 (626-706)||(22274562-22274642)
chr8 (626-706)||(39674009-39674089)
chr8 (628-706)||(36035131-36035210)
chr8 (626-656)||(5038648-5038678)
chr8 (626-660)||(8265354-8265388)
chr8 (626-704)||(11236875-11236953)
chr8 (626-660)||(16432078-16432112)
chr8 (710-779)||(20771478-20771548)
chr8 (710-779)||(20781272-20781342)
chr8 (627-705)||(25824854-25824932)
chr8 (626-706)||(26395403-26395485)
chr8 (629-706)||(33810679-33810757)
chr8 (626-660)||(39169571-39169605)
chr8 (627-705)||(43846975-43847053)
chr8 (673-706)||(4293919-4293952)
chr8 (626-706)||(5328517-5328598)
chr8 (633-706)||(10083202-10083275)
chr8 (636-705)||(12770408-12770477)
chr8 (623-660)||(23858283-23858320)
chr8 (626-706)||(34894408-34894489)
chr8 (623-656)||(37291012-37291045)
chr8 (635-668)||(44156788-44156821)
[»] chr5 (21 HSPs)
chr5 (633-705)||(8571833-8571905)
chr5 (628-706)||(3740993-3741072)
chr5 (635-705)||(7171768-7171838)
chr5 (627-668)||(5908270-5908311)
chr5 (626-706)||(11188632-11188713)
chr5 (626-706)||(17545122-17545203)
chr5 (626-705)||(22732316-22732396)
chr5 (626-705)||(4068022-4068101)
chr5 (630-705)||(11535630-11535705)
chr5 (635-705)||(28758377-28758448)
chr5 (710-779)||(13361190-13361260)
chr5 (626-660)||(22569195-22569229)
chr5 (626-660)||(28308320-28308354)
chr5 (630-660)||(29646068-29646098)
chr5 (626-660)||(36735958-36735992)
chr5 (626-706)||(6558840-6558921)
chr5 (623-656)||(10804176-10804209)
chr5 (673-706)||(11246520-11246553)
chr5 (627-668)||(11313555-11313596)
chr5 (627-668)||(19655924-19655965)
chr5 (627-660)||(24477910-24477943)
[»] scaffold0199 (1 HSPs)
scaffold0199 (626-700)||(8864-8939)
[»] scaffold0246 (1 HSPs)
scaffold0246 (627-705)||(24420-24498)
[»] scaffold0154 (1 HSPs)
scaffold0154 (627-705)||(28773-28851)
[»] scaffold0445 (1 HSPs)
scaffold0445 (626-706)||(3964-4045)
[»] scaffold0122 (1 HSPs)
scaffold0122 (710-779)||(17580-17650)
[»] scaffold0088 (1 HSPs)
scaffold0088 (626-706)||(10776-10857)


Alignment Details
Target: chr6 (Bit Score: 435; Significance: 0; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 204 - 830
Target Start/End: Original strand, 8131323 - 8131945
Alignment:
Q  204 agaaggtaaagatgaatcttgagagttagattgaaatgaagaatatgtggggtgctaaaaagattatggttatgcatatcacaaggtataaatccaagat 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8131323 agaaggtaaagatgaatcttgagagttagattgaaatgaagaatacgtggggtgctaaaaagattatggttatgcagatcacaaggtataaatccaagat 8131422  T
Q  304 aaccttattcatcaaccaaaaggactacatatctaaggttttgaagaagttcattatggatcaaaagaagtctctcagctgttgcacgtaaagaatgctc 403  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8131423 aaccttattcatcaaccaaaaggactacatatataaggttttgaagaagttcattatggatcaaaagaagtctctcagctgttgcacgtaaagaatgctc 8131522  T
Q  404 aattcacatnnnnnnnnnnnnnnnnnntcataactacaacatttttatattcaaaagttacttttcttttgaccttttaaacgttgtattaggacattta 503  Q
    |||||||||                  |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  8131523 aattcacat---taaaaaataaataaatcataattacaacatttttatattcaaaagttac--ttcttttgaccttttaaacgttgtatcaggacattta 8131617  T
Q  504 ttagcattttctaataatttataaattaaaaatatctaactagaggtactgaattcaaattcaatccggtcatgttaaatctccaagagaattttgccac 603  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8131618 ttagcattttctaataa-ttataaatt--aaatatctaactagaggtactgaattcaaattcaatccagtcatgttaaatctccaagagaattttgccac 8131714  T
Q  604 tcaatgcaa----nnnnnnnnnngttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccc 699  Q
    |||||||||              ||||||||| ||||||| ||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||    
T  8131715 tcaatgcaattcttttttttttggttaagtagtctagtggttggagttcacacaattaaatatggagaaattggatgtctggggtttgaaccccggcccc 8131814  T
Q  700 tgcatatctaaaaatttatcacataacatttttaaagttaaaaaatatgatggatgaccaaaactgtcaaattttaaaatggggacgactaattagatac 799  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8131815 tgcatatctaaaaatttatcacataacatttttaatgttaaaaaatatgatggatgaccaaaactgtcaaattttaaaatggggacgactaattagatat 8131914  T
Q  800 gttaccgtgaaagtagagtatatttttgaac 830  Q
    |||||||||||||||||||||||||||||||    
T  8131915 gttaccgtgaaagtagagtatatttttgaac 8131945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 627 - 703
Target Start/End: Original strand, 2488839 - 2488914
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgca 703  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |  |||||| |||||| |||| ||||||||||||    
T  2488839 agtagcctagtggctagagctcacacaatt-aatatgaagaagtgggatgtccggggttcgaactccgacccctgca 2488914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 23610271 - 23610349
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||| ||||||||| | ||||||| |  | ||||  | |||||||||||||||||||||||    
T  23610271 agtagcctagtggctggagctcgcacaattaattgtgaagaagtggggtgtccagcgtttgaaccccgacccctgcata 23610349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 7581164 - 7581083
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||| |||| | || |||| |||| ||||||| ||| ||||||| ||||||||||||    
T  7581164 aagtagcctagtggctagagctcacacaatttaattgtggagaagtaaggtgtctggcgttcgaaccccaacccctgcatat 7581083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 627 - 698
Target Start/End: Original strand, 4577741 - 4577812
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgaccc 698  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |  | | |||||||||  |||||||||||    
T  4577741 agtagcctagtgtctggagctcacacaattaaatttgaagaagtggggtatctggggttcaaaccccgaccc 4577812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 704
Target Start/End: Complemental strand, 7977175 - 7977097
Alignment:
Q  627 agtagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcat 704  Q
    ||||||||||||| | ||||||||||| || ||||| |||||| ||| |||||  |||||| |||||||||||||||||    
T  7977175 agtagcctagtggttagagctcacacattttaaatacgaagaagtaaaatgtccagggtttaaaccccgacccctgcat 7977097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 17534965 - 17534887
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| || ||||||||||||||| || |||| | || |||| || ||| |||||||| ||||||||||    
T  17534965 agtagcctagtggctagaactcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcata 17534887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 660
Target Start/End: Complemental strand, 20729074 - 20729037
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20729074 gttaagtagcctagtggctagagctcacacaattaaat 20729037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 660
Target Start/End: Original strand, 29646500 - 29646533
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||||||||||||||||||    
T  29646500 agtagcctagtggctggagctcacacaattaaat 29646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 706
Target Start/End: Complemental strand, 3294887 - 3294803
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||| ||||||||||||| || ||||||||||| |||  ||||||| |  | |||| |||||| ||||||||||||||||||||    
T  3294887 gttaaatagcctagtggctagaactcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatat 3294803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 34268398 - 34268322
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||| ||||| |||||||||||||||| | ||||||| || | |||  |||||| |||||| ||||||||||||    
T  34268398 tagcctaatggctagagctcacacaattaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcata 34268322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 753
Target Start/End: Complemental strand, 2236864 - 2236821
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga 753  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||    
T  2236864 aaaatttatcacatcacatttttatagttcaaaaatatgatgga 2236821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 16406680 - 16406609
Alignment:
Q  634 tagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||| |||||||| ||||||||  |||| |||| |||||||||||  ||||||  ||||||||||    
T  16406680 tagtggctggaactcacacatttaaatatagagaagtaaggtgtctggggttcaaaccccagcccctgcata 16406609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 18904383 - 18904304
Alignment:
Q  628 gtagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||| ||||||||||||||||||||| || |||| || |||| |  | |||| |||||| ||||||||||||||||||||    
T  18904383 gtagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatat 18904304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 32621534 - 32621613
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||||||| || |||||||| |||||||||||    
T  32621534 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtctgggattcgaaccccggcccctgcatat 32621613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 706
Target Start/End: Complemental strand, 1435930 - 1435848
Alignment:
Q  624 ttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||| || |||||| |||||||||||||||||| || |||| |   ||||| |||||| |||||| | |||||||||||    
T  1435930 ttaagtagtctggtggctagagctcacacaattaaatgtggagaagtggaatgtccggggttcgaaccctggcccctgcatat 1435848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 3795724 - 3795758
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  3795724 aagtagcctagtggctagagctcacacaattaaat 3795758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 7425486 - 7425452
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  7425486 aagtagcctagtggctagagctcacacaattaaat 7425452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 705
Target Start/End: Original strand, 32670002 - 32670084
Alignment:
Q  624 ttaagtagcctagtggctggagctcacacaat-taaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||  ||||||||||||| | |||||||| |||| || | |||| |||||| |||||||  ||||||||||    
T  32670002 ttaagtagcctagtgtttggagctcacacattataaatatggagaagtagggtgtcaggggttcgaacccctgcccctgcata 32670084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 32788806 - 32788884
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||| |||||||||| || |||| |  | |||| || ||| ||||||| |||||||||||    
T  32788806 agtagcctagtggctagagctcatacaattaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcata 32788884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 706
Target Start/End: Complemental strand, 5944506 - 5944465
Alignment:
Q  665 agaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  5944506 agaaatagggtgtctggagtttgaaccccgacccctgcatat 5944465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 22997456 - 22997375
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||||||| |||||||||||| |||| | || |||| || | |||| |||||| |||||||||||||| |||||    
T  22997456 aagtagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatat 22997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 23790945 - 23791026
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||||||| |||||||||||| |||| | || |||| || | |||| |||||| |||||||||||||| |||||    
T  23790945 aagtagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatat 23791026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 5e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 706
Target Start/End: Original strand, 44568167 - 44568250
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||| | || ||||| | ||| ||||||||||||||||||||    
T  44568167 gttaagtagtctagtggcttgagctcacacaattaaatatggagaagtgaggtgtctcgagttcgaaccccgacccctgcatat 44568250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 627 - 703
Target Start/End: Original strand, 27091425 - 27091500
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgca 703  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |  |||||| |||||| |||| ||||||||||||    
T  27091425 agtagcctagtggctagagctcacacaatt-aatatgaagaagtgggatgtccggggttcgaactccgacccctgca 27091500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 12499138 - 12499068
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||| ||||| ||||||||| |||| ||||||||||||||  ||||||||||||| |||||||||||    
T  12499138 aaaatttaccacatcacatttttatagttcaaaaatatgatggagggaccaaaactgtcgaattttaaaat 12499068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 36061140 - 36061070
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||| ||| ||||||||| |||| ||||||||||||||  ||||||||||||| |||||||||||    
T  36061140 aaaatttatcgcatcacatttttatagttcaaaaatatgatggagggaccaaaactgtcgaattttaaaat 36061070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 778
Target Start/End: Complemental strand, 44363035 - 44362966
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaa 778  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||  ||||||||||||| | ||||||||    
T  44363035 aaaatttatcacatcacatttttatagttcaaaaatatgatggagggaccaaaactgtcgagttttaaaa 44362966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 777
Target Start/End: Original strand, 18879294 - 18879362
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaa 777  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||  |||||||| ||||||||||||||    
T  18879294 aaaatttatcaaataacatttttttagttcaaaaatatgatggagggaccaaaattgtcaaattttaaa 18879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 43905829 - 43905749
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||||||  || |||| |  | |||| |||||| ||||||||| ||||||||||    
T  43905829 aagtagcctagtggctagagctcacacaattaaacgtggagaagtggggtgtccggggttcgaaccccgatccctgcatat 43905749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 51890913 - 51890837
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| |||||||||||||||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  51890913 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 51890837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 1351390 - 1351320
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||  |||||||| |||| |||||||||||    
T  1351390 aaaatttatcacatcacatttttatagttcaaaaatatgatagagggaccaaaattgtcgaattttaaaat 1351320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 2629697 - 2629619
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||| ||||| |||||||||||||||||| || |||| |  | |||  |||||| |||||||||||||||||||    
T  2629697 agtagcctaatggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcata 2629619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 6216320 - 6216250
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| || |||||| |||| ||||||||||||||  |||||||||| || |||||||||||    
T  6216320 aaaatttatcacatcacctttttatagttcaaaaatatgatggagggaccaaaactatcgaattttaaaat 6216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 705
Target Start/End: Complemental strand, 29406471 - 29406397
Alignment:
Q  631 gcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||| |||||||||||||||||||| || |||| |  | |||| || ||| |||||||||||||||||||    
T  29406471 gcctagtggttggagctcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcata 29406397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 31852467 - 31852389
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |  | |||| |||||| ||||| || ||| ||||||    
T  31852467 agtagcctagtggctagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccttgcata 31852389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 40486559 - 40486481
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| |    |||| |||||| |||||||| ||||||||||    
T  40486559 agtagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcata 40486481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 626 - 668
Target Start/End: Original strand, 45312207 - 45312249
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  45312207 aagtagcctattggctagagctcacacaattaaatatgaagaa 45312249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 4700888 - 4700969
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| |  |||||| |||||| | || |||||||||||||||    
T  4700888 aagtagcctagtggctagagctcacacaattaaattgtggagaagtgggatgtccggggttcggacaccgacccctgcatat 4700969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 10402561 - 10402480
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||| |||| | || |||| | || |||| |||||| |||| |||||||||||||||    
T  10402561 aagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatat 10402480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 30057342 - 30057261
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||| | |||||||||||||| |||  || |||| |  | |||| |||||||||||||||||||||||||||    
T  30057342 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggtttgaaccccgacccctgcatat 30057261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 17815376 - 17815456
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| ||||||||  ||||||||||  |||||||| |||| || | |||| ||| || ||||||||||||||||||||    
T  17815376 aagtagcttagtggctaaagctcacacatataaatatggagaagtagggtgtcagggattcgaaccccgacccctgcatat 17815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 23924826 - 23924902
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| |||||||||||| ||||| || |||| | |  |||| |||||| |||||||| ||||||||||    
T  23924826 tagcctagtggctagagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcccctgcata 23924902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 49264642 - 49264566
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| |||||||||||||||||| || |||| |  | |||| |||||| ||||| || ||||||||||    
T  49264642 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcccctgcata 49264566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 627 - 691
Target Start/End: Original strand, 51759611 - 51759675
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaacc 691  Q
    ||||| ||||||||| ||||||||||||||||||||| || | | ||||||| |||||| |||||    
T  51759611 agtagtctagtggctagagctcacacaattaaatatggagcagtgagatgtccggggttcgaacc 51759675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 30305917 - 30305838
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| | || |||| |||||| |||||||  |||||||||||    
T  30305917 gtagcctagtggctggagctcacacattttaaatgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatat 30305838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 36099135 - 36099214
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||| |||||| |||||||| |||||||||||    
T  36099135 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 36099214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 11294790 - 11294868
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||| ||| |||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  11294790 agtagcctagtggctagagctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 11294868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 13564218 - 13564252
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  13564218 aagtagcctagtggctagagctcacacaattaaat 13564252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 37935981 - 37935947
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  37935981 aagtagcctagtggctagagctcacacaattaaat 37935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 38848072 - 38848150
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||| ||||||| | ||||||||||| |||||| || |||| |  | |||| |||||| |||||||||||||||||||    
T  38848072 agtagtctagtggttagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 38848150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 48569126 - 48569160
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  48569126 aagtagcctagtggctagagctcacacaattaaat 48569160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 677
Target Start/End: Original strand, 49903649 - 49903687
Alignment:
Q  639 gctggagctcacacaattaaatatgaagaaataagatgt 677  Q
    |||||||||||||||||||||||||||||| || |||||    
T  49903649 gctggagctcacacaattaaatatgaagaagtaggatgt 49903687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 2222659 - 2222578
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  2222659 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 2222578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Original strand, 10406976 - 10407009
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  10406976 gttaagtagcctagtggctagagctcacacaatt 10407009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 700
Target Start/End: Original strand, 28465726 - 28465799
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccct 700  Q
    |||||| || ||||| |||||||||||||||| | || |||| | || ||||||| ||| ||||||||||||||    
T  28465726 agtagcgtaatggctagagctcacacaattaattgtggagaagtgaggtgtctggagttcgaaccccgacccct 28465799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 40051742 - 40051661
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | ||||||||||| ||||||| |||||| |||||    
T  40051742 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacccctacccctacatat 40051661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 706
Target Start/End: Original strand, 41137874 - 41137951
Alignment:
Q  630 agcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||| ||||||| ||| || |||||||||||| |  | |||||| |||| ||||||| ||||||||||||    
T  41137874 agcctagtggctagagctcaaacattttaaatatgaagaagtggggtgtctgtggttcgaaccccaacccctgcatat 41137951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 668
Target Start/End: Original strand, 46791160 - 46791201
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  46791160 agtagcctagtggctgaagctcacagaattaaatgtgaagaa 46791201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 55021674 - 55021593
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||||||| |||||||||||||| |||  || |||| | |  |||| |||||| ||||||||||||||||||||    
T  55021674 aagtagtctagtggctagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcatat 55021593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 55853058 - 55853139
Alignment:
Q  626 aagtagcctagtggctggagctcacacaat-taaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||| ||| | ||||||| |  |||||  |||||| |||| ||| |||||||||||    
T  55853058 aagtagcctagtggctagagctcacacaatctaattgtgaagaagtgggatgttcggggttcgaacaccggcccctgcatat 55853139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 8e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 35021095 - 35021026
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| |||||||||||||| || |||||||||| |||||||||||    
T  35021095 aaaatttatcacatcacatttttatagttcaaaaatatgatggaggatcaaaactgtcgaattttaaaat 35021026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 706
Target Start/End: Original strand, 23919429 - 23919508
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||| |||||||||||||| || ||||||  | |||||||| || |||||||||||||| |||||    
T  23919429 agtagcctagtggctggagttcacacaattaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatat 23919508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 3596361 - 3596290
Alignment:
Q  634 tagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||||||||||||||| || |||| |  | |||| |||||| |||||||||||||||||||    
T  3596361 tagtggctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 3596290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 13242683 - 13242761
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||| ||||| ||||||||||||||| || |||| | || |||| | |||| |||||||||||||||||||    
T  13242683 agtagcctagtgactggatctcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcata 13242761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 40609863 - 40609933
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||| ||||||||| ||||||||| |||| ||||||||||||||  || ||||||| ||||||||||||||    
T  40609863 aaaagttatcacatcacatttttatagtttaaaaatatgatggagggatcaaaactctcaaattttaaaat 40609933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 705
Target Start/End: Complemental strand, 1964454 - 1964393
Alignment:
Q  644 agctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||| |||| |  | |||| ||||||||||||||| ||||||||||    
T  1964454 agctcacacaattaaatatggagaagtggggtgtccggggtttgaaccccggcccctgcata 1964393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 11190048 - 11189967
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||| ||||| |||||||||||||| |||  || |||| |  ||||||||||||| || |||||||||||||||||    
T  11190048 aagtagcctaatggctagagctcacacaatttaattgtggagaagtgggatgtctggggttcgacccccgacccctgcatat 11189967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 15069749 - 15069830
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat-atgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||| | ||| |||||||||||||||||| |||||||| |    |||| |||||| ||||||||||||||||||||    
T  15069749 aagtagcctattcgctagagctcacacaattaaattatgaagaagtggagtgtccggggttcgaaccccgacccctgcatat 15069830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 32854652 - 32854571
Alignment:
Q  626 aagtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||||  |||||| || |||| || | |||| |||||| |||||||| ||| |||||||    
T  32854652 aagtagcctagtggctggagctcacacattttaaatgtggagaagtagggtgtccggggttcgaaccccggcccttgcatat 32854571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 706
Target Start/End: Original strand, 40363029 - 40363102
Alignment:
Q  633 ctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| | ||||||||||||||||||||| |||| ||   |||| |||||| |||||||||||||| |||||    
T  40363029 ctagtggttagagctcacacaattaaatatggagaagtagagtgtcgggggttcgaaccccgacccctacatat 40363102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 826
Target Start/End: Complemental strand, 40848589 - 40848550
Alignment:
Q  787 actaattagatacgttaccgtgaaagtagagtatattttt 826  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  40848589 actaaatagatacgttaccgtgaaagaagagtatattttt 40848550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 1027585 - 1027663
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||  |||||||||||||||||| || |||| ||   |||||| |||| |||||| ||||| ||||||    
T  1027585 agtagcctagtggccagagctcacacaattaaatgtgtagaagtagagtgtctgaggttcgaaccctgacccttgcata 1027663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 20919728 - 20919650
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||||| |||||||| || |||| |  | |||| |||||| |||||||| |||| |||||    
T  20919728 agtagcctagtggctagagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcata 20919650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 701
Target Start/End: Complemental strand, 22333893 - 22333819
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctg 701  Q
    ||||||||||| |||||||||||||||||||||| || |||| |  | ||||  || || |||||||||||||||    
T  22333893 agtagcctagttgctggagctcacacaattaaatgtggagaagtggggtgtccaggcttcgaaccccgacccctg 22333819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 29772228 - 29772262
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  29772228 aagtagcctagtggctagagctcacacaattaaat 29772262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 38387775 - 38387741
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  38387775 aagtagcctagtggctagagctcacacaattaaat 38387741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 41566882 - 41566848
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  41566882 aagtagcctagtggctagagctcacacaattaaat 41566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Original strand, 4562699 - 4562732
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  4562699 gttaagtagcctagtggctagagctcacacaatt 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 17524956 - 17524923
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||||||||||| ||||||    
T  17524956 agtagcctagtggctggagctcacacatttaaat 17524923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 18254709 - 18254628
Alignment:
Q  626 aagtagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||| |||||||| ||||||||||||| || |||| ||||||| |  | ||||||| ||| |||||||| |||||||||||    
T  18254709 aagtaacctagtggttggagctcacacattttaaatgtgaagaagtggggtgtctggagttcgaaccccggcccctgcatat 18254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 25562642 - 25562609
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||||||||| ||||||||    
T  25562642 agtagcctagtggctggagctcacataattaaat 25562609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 30390319 - 30390400
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||| | ||||||||||||||||| | || |||| || | |||| |||||| |||||||| | |||||||||    
T  30390319 aagtagcctagtggttagagctcacacaattaaattgtggagaagtagggtgtccggggttcgaaccccggctcctgcatat 30390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 33228883 - 33228964
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  33228883 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 33228964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 656
Target Start/End: Original strand, 35797977 - 35798006
Alignment:
Q  627 agtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||||||||||||||    
T  35797977 agtagcctagtggctggagctcacacaatt 35798006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 15085636 - 15085715
Alignment:
Q  628 gtagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||||||||||||| || ||||||| |||| | || |||| |||||| ||||||||||||||||||||    
T  15085636 gtagcctagtggctggagctcacacattttaaatatggagaagtgaggtgtccggggttcgaaccccgacccctgcatat 15085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 25189603 - 25189673
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||    
T  25189603 aaaatttatcacatcacatttttatagttaaaaaatatgatggagggaccaaaactgttgaattttaaaat 25189673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 3748552 - 3748633
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| | ||||||| |||||| ||||||| ||||||||||||    
T  3748552 aagtagcctagtggctagagctcacacaattaaattgtggagaagtgagatgtccggggttcgaaccccaacccctgcatat 3748633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 29098811 - 29098731
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||||||| || || ||||||||||||||| ||||||  | |||| |||||| ||||||||||||||||||||    
T  29098811 aagtagtctagtggctagaacttacacaattaaatatggagaaatggggtgtccggggttcgaaccccgacccctgcatat 29098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 623 - 706
Target Start/End: Complemental strand, 45647426 - 45647342
Alignment:
Q  623 gttaagtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||| |||||||||  || ||||||||||||||| | || |||| |||||| |||||||| |||||||||||    
T  45647426 gttaagtagcctagtggttggagctcaagcatattaaatatgaagaagtgaggtgtccggggttcgaaccccgccccctgcatat 45647342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 39450743 - 39450673
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||    
T  39450743 aaaatttttcacatcacatttttatagttcaaaaatatgatggagggatcaaaactgtcaaattttaaaat 39450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 47098634 - 47098556
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||| ||||||||||||||||||| |||||||| || |||| | || ||||||||||| ||||| || ||||||||||    
T  47098634 agtagtctagtggctggagctcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcata 47098556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 634 - 706
Target Start/End: Complemental strand, 2106136 - 2106063
Alignment:
Q  634 tagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||||||| || |||| |||||||||| |||||| ||  || ||||||||||||||||||||    
T  2106136 tagtggctggagctcacacattttaaatgtgaagaaataggatgtccggtattcgaaccccgacccctgcatat 2106063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 25883938 - 25884019
Alignment:
Q  626 aagtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||||  |||||| || |||| |  | |||| |||||| ||||||||||||||||||||    
T  25883938 aagtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatat 25884019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 24303506 - 24303430
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| |||||||||||||||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  24303506 tagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 24303430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 38949792 - 38949714
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||||||| ||||||| || |||| |  | |||  |||||| |||||||| ||||||||||    
T  38949792 agtagcctagtggctggagctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcata 38949714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 49577471 - 49577409
Alignment:
Q  643 gagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||||||||| |||| |  | |||||||||||| |||||||||| |||||||    
T  49577471 gagctcacacaattaaatatggagaagtggggtgtctggggtttaaaccccgaccgctgcata 49577409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 668
Target Start/End: Complemental strand, 9685114 - 9685073
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  9685114 agtagcctagtggctggagctcacacatttaaatatggagaa 9685073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 46844928 - 46845001
Alignment:
Q  632 cctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| ||||||||||||||| |||||| || |||| || | |||| |||||| |||| ||||||||||||||    
T  46844928 cctagtagctggagctcacacatttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcata 46845001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 48722364 - 48722283
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatga-agaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| |||||||| |||||||||||||| |||   | ||||||| | |||| |||||| ||||||||||||||||||||    
T  48722364 aagtagcttagtggctagagctcacacaatttaattgtagagaaatagggtgtccggggttcgaaccccgacccctgcatat 48722283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 28951832 - 28951756
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| ||||||||||| |||||| ||||||  |  | ||||||||||| |||||||  ||||||||||    
T  28951832 tagcctagtggctagagctcacacatttaaatgtgaagatgtggggtgtctggggttcgaaccccagcccctgcata 28951756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 706
Target Start/End: Original strand, 30779514 - 30779598
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||| || |||||||||||||| | || |||| |  | ||||  ||||| ||||||||||||||||||||    
T  30779514 gttaagtagcctagtggctagaactcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatat 30779598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 32401606 - 32401531
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||||||||||||| || |||  |  | |||| |||||| ||| |||||||||||||||    
T  32401606 tagcctagtggctggagctcacacaattaaatgtggagatgtggggtgtccggggttcgaa-cccgacccctgcata 32401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 40212490 - 40212410
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| ||||| || ||| ||||||||||||||||| |||| | |||| |  |||||| ||||||| ||||||||||||    
T  40212490 aagtagcttagtgactagagatcacacaattaaatatggagaagtgagatatacggggttcgaaccccaacccctgcatat 40212410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 706
Target Start/End: Original strand, 52309060 - 52309141
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||| || ||||||  ||||||| || |||| |  | ||||||||||| |||||||||| |||||||||    
T  52309060 gttaagtagcctagtggctagaactcaca--attaaatgtggagaagtggggtgtctggggttcgaaccccgactcctgcatat 52309141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 27329884 - 27329963
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||| |||||| |||||||| |||||||||||    
T  27329884 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 27329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 35849592 - 35849521
Alignment:
Q  634 tagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||||||||  | |||| |  | ||| ||||||| |||||||| ||||||||||    
T  35849592 tagtggctggagctcacacaattaaatggggagaagtggggtgtttggggttcgaaccccggcccctgcata 35849521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 41253701 - 41253780
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  ||||||||| | || | || |||  |||||| |||||||| |||||||||||    
T  41253701 gtagcctagtggctggagctcacacattttaaatatggaaaagtgaggtgttcggggttcgaaccccggcccctgcatat 41253780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 46767461 - 46767382
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  |||||| |||||||||||| |  |||||||||||    
T  46767461 gtagcctagtggctggagctcacacattttaaatgtggagaagtgggatgtccggggtttgaacctcagcccctgcatat 46767382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 51879213 - 51879134
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||| |||||| |||||||| |||||||||||    
T  51879213 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 51879134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 4227696 - 4227774
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||| ||| ||||| |||||||||||||||| |||| |||| |  | |||| || ||| |||||||||||||||||||    
T  4227696 agtagtctaatggctagagctcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcata 4227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 5173962 - 5174040
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| |||||||||||||||||| || |||| |  | |||  |||||| |||||||  ||||||||||    
T  5173962 agtagcctagtggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcata 5174040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 6488244 - 6488210
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  6488244 aagtagcctagtggctagagctcacacaattaaat 6488210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 17218608 - 17218574
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  17218608 aagtagcctagtggctagagctcacacaattaaat 17218574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 19222538 - 19222616
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||| | || ||||||||||||||||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  19222538 agtagcctaatagccggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 19222616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 22501881 - 22501915
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  22501881 aagtagcctagtggctagagctcacacaattaaat 22501915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 27837383 - 27837306
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| | ||||||||||| |||||| | |||||||  |||||| || ||| ||||||| |||||||||||    
T  27837383 agtagcctagtggttagagctcacacatttaaatgt-aagaaatgggatgtccggagttcgaaccccaacccctgcata 27837306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 33606890 - 33606924
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  33606890 aagtagcctagtggctagagctcacacaattaaat 33606924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 34757636 - 34757602
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  34757636 aagtagcctagtggctagagctcacacaattaaat 34757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 38018371 - 38018301
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||| | ||||||||| |||| ||||||||||||||  |||||| | |||| |||||||||||    
T  38018371 aaaatttatcacgtcacatttttatagttcaaaaatatgatggagggaccaagattgtcgaattttaaaat 38018301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 38216288 - 38216358
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgg-atgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||| | || ||||||  ||| ||||||||||||| |||||||||| |||| |||||||||||    
T  38216288 aaaatttatcacgtcacttttttattgttcaaaaatatgatggaatgaccaaaagtgtcgaattttaaaat 38216358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 41411579 - 41411657
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| |||||||| || ||||||||||||||| || ||||    | |||| |||||||||||||||| |||||||||    
T  41411579 agtagcttagtggctagaactcacacaattaaatgtggagaagcggggtgtccggggtttgaaccccgaaccctgcata 41411657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 44764520 - 44764554
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  44764520 aagtagcctagtggctagagctcacacaattaaat 44764554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 48515337 - 48515415
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||| ||||||| |||||| || |||| |  | |||| |||||| ||||| |||||||||||||    
T  48515337 agtagcctagtggctagagttcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcata 48515415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 49443375 - 49443453
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||||||| |||||| || |||| |  | |||| |||||| |||| ||| ||||||||||    
T  49443375 agtagcctagtggctagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcata 49443453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 49726525 - 49726456
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    |||||||||| ||| | ||||||| |||| |||| ||||||||| | ||||||||||||||||||||||||    
T  49726525 aaaatttatctcatcatatttttatagttcaaaa-tatgatggagggaccaaaactgtcaaattttaaaat 49726456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 54408502 - 54408580
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||| | ||||||||| |||||||| || | ||||  | |||| |||||| ||||||||||| |||||||    
T  54408502 agtagcctagtggttagagctcacataattaaatgtggaaaaatggggtgtccggggttcgaaccccgacctctgcata 54408580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 5641564 - 5641645
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| |||||||| |||||||||||| |||| | ||||||| | || |||| | |||| |||||||| |||||||||||    
T  5641564 aagtagcttagtggctagagctcacacaatttaattgtgaagaagtgaggtgtccgaggttcgaaccccggcccctgcatat 5641645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Complemental strand, 7920443 - 7920410
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  7920443 gttaagtagcctagtggctagagctcacacaatt 7920410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 13874860 - 13874893
Alignment:
Q  673 gatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||| |||||||||||||||||||||||    
T  13874860 gatgtctgggatttgaaccccgacccctgcatat 13874893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 39720055 - 39719974
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  39720055 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 39719974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 704
Target Start/End: Complemental strand, 41710701 - 41710624
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcat 704  Q
    ||||||||||||||||||||||||||  |||||| || |||| | || |||| ||| || |||||||| |||||||||    
T  41710701 gtagcctagtggctggagctcacacattttaaatgtggagaagtgaggtgtccgggattcgaaccccggcccctgcat 41710624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 41936357 - 41936438
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  41936357 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 41936438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 46754648 - 46754567
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||| ||||||| || |||||||||||||| || | || ||||||||| |||| |||||| |||  |||||||||||||||    
T  46754648 aagtaacctagtgactagagctcacacaatttaactgtggagaaataaggtgtccggggttcgaaatccgacccctgcatat 46754567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Original strand, 49194639 - 49194676
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  49194639 gttaagtagcatagtggctagagctcacacaattaaat 49194676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 53432687 - 53432768
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  53432687 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 53432768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 1247373 - 1247295
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||| |||||||||| || |||| | || ||||||||||| ||||| |||||||||||||    
T  1247373 agtagcctagtggctagagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcata 1247295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 626 - 705
Target Start/End: Original strand, 33133881 - 33133961
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccg-acccctgcata 705  Q
    |||||| ||||||||| || ||||||||||||||||||||||| | ||||||||| |||| || ||||| |||||||||||    
T  33133881 aagtagtctagtggctagaactcacacaattaaatatgaagaagtgagatgtctgaggttcgatccccgaacccctgcata 33133961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 626 - 704
Target Start/End: Complemental strand, 49907400 - 49907321
Alignment:
Q  626 aagtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcat 704  Q
    |||||||||||||||||||| |||||||  ||||||||| ||||||| |||||| |||||| ||||| |||||| |||||    
T  49907400 aagtagcctagtggctggagttcacacattttaaatatggagaaataggatgtccggggttcgaacctcgacccttgcat 49907321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 621679 - 621617
Alignment:
Q  643 gagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||| ||||||||| ||||||  ||||| ||||||| |||||||||||||||||||    
T  621679 gagctcacacatttaaatatggagaaatgtgatgtttggggttcgaaccccgacccctgcata 621617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 15061572 - 15061503
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    |||||||||| ||| |||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||    
T  15061572 aaaatttatcccatcacatttttaaagttcaaaa-tatgatgaatggaccaaaactgtcaaattttaaaat 15061503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 17487644 - 17487566
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||||||||  |||| ||| |||| |  | |||| |||||||||| |||||||||||||||    
T  17487644 agtagcctagtggctggagctcacacatataaaaatggagaagtggggtgtccggggtttgaagcccgacccctgcata 17487566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 42508378 - 42508308
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgg-atgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| |||||||||| || | ||||||||||||| |||||||||||    
T  42508378 aaaatttatcacatcacatttttatagttcaaaaatatgacggaaggaccaaaactgtcgaattttaaaat 42508308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 44166581 - 44166511
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    ||||||||||| || | ||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  44166581 aaaatttatcagatcatatttttatagttcaaaaatataatggatggaccaaaactgtcaaattttaaaat 44166511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 668
Target Start/End: Complemental strand, 24875089 - 24875048
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  24875089 agtagcctagtggctggagctcacacaattaaatatggagaa 24875048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 39670784 - 39670859
Alignment:
Q  630 agcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||| | |||||||||||||||||| || |||| |  ||||||||| ||| ||||||| |||||||||||    
T  39670784 agcctagtggttagagctcacacaattaaatgtggagaagtgggatgtctggagttcgaaccccaacccctgcata 39670859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 705
Target Start/End: Complemental strand, 50119091 - 50119012
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||| ||||||| |||||||||||||||||| || |||| |  | |||| |||||| |||| ||||||||||||||    
T  50119091 aagtagcccagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccgacccctgcata 50119012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 38275880 - 38275810
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||  |||||||||  || |||||||||||    
T  38275880 aaaatttatcacatcacatttttatagttcaaaaatatgatggagggaccaaaaccatcgaattttaaaat 38275810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 51050310 - 51050229
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| |   |||||||||||| |||||||  |||||||||||    
T  51050310 aagtagcctagtggctagagctcacacaattaaattgtggagaagtggaatgtctggggttcgaaccccatcccctgcatat 51050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 627 - 706
Target Start/End: Complemental strand, 23234070 - 23233990
Alignment:
Q  627 agtagcctagtggctggagctcacacaat-taaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||| |||| |||| ||||||||||| | ||||| || |||| || | ||||||||||| ||||||||||||||||||||    
T  23234070 agtagtctagcggctagagctcacacattataaatgtggagaagtagggtgtctggggttcgaaccccgacccctgcatat 23233990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 705
Target Start/End: Original strand, 16997210 - 16997289
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||| ||||||||| ||||||||||||| ||| || |||| | || |||| |||||| ||||| || ||||||||||    
T  16997210 aagtagcgtagtggctgaagctcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcata 16997289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 23991219 - 23991294
Alignment:
Q  630 agcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||| |||||||||||||||||| || |||| |  | ||||  ||||| |||||||| ||||||||||    
T  23991219 agcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcata 23991294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 660
Target Start/End: Complemental strand, 37280817 - 37280786
Alignment:
Q  629 tagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||||||||||||||||    
T  37280817 tagcctagtggctggagctcacacaattaaat 37280786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 7166177 - 7166211
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  7166177 aagtagcctagtggctagagctcacacaattaaat 7166211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 11215121 - 11215087
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  11215121 aagtagcctagtggctagagctcacacaattaaat 11215087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 18467148 - 18467182
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  18467148 aagtagcctagtggctagagctcacacaattaaat 18467182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 19011475 - 19011441
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  19011475 aagtagcctagtggctagagctcacacaattaaat 19011441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 22563506 - 22563472
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  22563506 aagtagcctagtggctagagctcacacaattaaat 22563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 33843147 - 33843225
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||| ||| |||||||||||||||||||||||  ||||||| |  | |||  |||||| ||||||||||| |||||||    
T  33843147 agtagtctattggctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcata 33843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 33950832 - 33950754
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||| ||| |||||||||||||||||||||||  ||||||| |  | |||  |||||| ||||||||||| |||||||    
T  33950832 agtagtctattggctggagctcacacaattaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcata 33950754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 643 - 685
Target Start/End: Original strand, 43508667 - 43508709
Alignment:
Q  643 gagctcacacaattaaatatgaagaaataagatgtctggggtt 685  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||    
T  43508667 gagctcacacaattaaatatggagaaatgagatgtctgaggtt 43508709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 45333662 - 45333696
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  45333662 aagtagcctagtggctagagctcacacaattaaat 45333696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 45517218 - 45517252
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  45517218 aagtagcctagtggctagagctcacacaattaaat 45517252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 50899453 - 50899487
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  50899453 aagtagcctagtggctagagctcacacaattaaat 50899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 6702696 - 6702615
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||| ||||| |||||||||||||| |||  ||||||| |    ||||||||||| |||||||||| |||||||||    
T  6702696 aagtagcctaatggctagagctcacacaatttaattgtgaagaagtggagtgtctggggttcgaaccccgactcctgcatat 6702615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 7491879 - 7491846
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||| ||||||||||||||||||    
T  7491879 agtagcctagtggctagagctcacacaattaaat 7491846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 700
Target Start/End: Complemental strand, 11860160 - 11860087
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccct 700  Q
    ||||| |||||||| ||| ||||||||||||||| || |||| |  | |||| |||||| ||||||||||||||    
T  11860160 agtagtctagtggccggacctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccgacccct 11860087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 21265776 - 21265695
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  21265776 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 21265695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Original strand, 32970748 - 32970781
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  32970748 gttaagtagcctagtggctagagctcacacaatt 32970781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 705
Target Start/End: Original strand, 36666529 - 36666606
Alignment:
Q  628 gtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||| ||||| |||||||||||||||| | || |||| |  | |||| |||||| |||||||| ||||||||||    
T  36666529 gtagcctaatggctagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 36666606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 21067005 - 21066925
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||| ||||||||||| || |||| | ||||||| |||||| |||||||| ||||| |||||    
T  21067005 aagtagcctagtggctagagctcgcacaattaaatgtggagaagtgagatgtccggggttcgaaccccggcccctacatat 21066925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 42457459 - 42457389
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggat-gaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| | ||||||| |||||||||||||||||||| || |||||||||  |||||||||||    
T  42457459 aaaatttatcacatcatatttttatagttaaaaaatatgatggatggatcaaaactgttgaattttaaaat 42457389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 623 - 706
Target Start/End: Original strand, 13730045 - 13730128
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||| |||||||||| || ||||||||||||||||||||| ||||||    |||| ||||||  ||||||| |||||||||||    
T  13730045 gttaaatagcctagtgactagagctcacacaattaaatatggagaaatggagtgtccggggttcaaaccccggcccctgcatat 13730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 643 - 706
Target Start/End: Complemental strand, 23817290 - 23817227
Alignment:
Q  643 gagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||||  || ||||||| | ||| |||||||||||||||||||||| |||||    
T  23817290 gagctcacacaattaaacgtggagaaatagggtgtttggggtttgaaccccgacccctacatat 23817227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 27788387 - 27788309
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||| |||||||||||||| ||| |||||| || |||| |  | ||||||||||| |||||||| ||||||||||    
T  27788387 agtagcctggtggctggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcata 27788309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 27791543 - 27791465
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||| |||||||||||||| ||| |||||| || |||| |  | ||||||||||| |||||||| ||||||||||    
T  27791543 agtagcctggtggctggagctcatacatttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcata 27791465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 15239009 - 15238928
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| |||| |||| |    |||| |||||| |||||||| |||||||||||    
T  15239009 aagtagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccggcccctgcatat 15238928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 20896474 - 20896543
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatgaccaaaactgtcaaattttaaaat 779  Q
    ||||||| |||||| ||||||||| |||| |||||||||||||| || ||||||| |  |||||||||||    
T  20896474 aaaatttctcacatcacatttttatagttcaaaaatatgatggaggaacaaaacttttgaattttaaaat 20896543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 779
Target Start/End: Original strand, 44858023 - 44858092
Alignment:
Q  711 aaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    |||||||||||||  |||||||| |||| |||||| |||| || | ||||||||||||||||||||||||    
T  44858023 aaatttatcacattgcatttttatagttcaaaaatttgatagagggaccaaaactgtcaaattttaaaat 44858092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 706
Target Start/End: Complemental strand, 3392590 - 3392506
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaat-atgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||  | |||||||||||||| ||| | |||||| |  | ||||||||||| |||||||||||||| |||||    
T  3392590 gttaagtagcctagtgattagagctcacacaatttaattacgaagaagtggggtgtctggggttcgaaccccgacccctacatat 3392506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 9697841 - 9697875
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  9697841 aagtagcctagtggctagagctcacacaattaaat 9697875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 693
Target Start/End: Complemental strand, 12935858 - 12935792
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaacccc 693  Q
    ||||||||||||||| |||||||||||||||||| || |||| |  |  |||||||||| |||||||    
T  12935858 agtagcctagtggctagagctcacacaattaaatgtggagaagtggggcgtctggggttcgaacccc 12935792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 13720890 - 13720856
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  13720890 aagtagcctagtggctagagctcacacaattaaat 13720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 701
Target Start/End: Original strand, 15021163 - 15021237
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctg 701  Q
    ||||| ||||||||| ||||||||||| |||||| || | |||| || |||| |||||| |||||||||| ||||    
T  15021163 agtagtctagtggctagagctcacacatttaaatgtggaaaaatgaggtgtccggggttcgaaccccgactcctg 15021237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 19331450 - 19331484
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  19331450 aagtagcctagtggctagagctcacacaattaaat 19331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 27424958 - 27424924
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  27424958 aagtagcctagtggctagagctcacacaattaaat 27424924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 629 - 706
Target Start/End: Complemental strand, 32047206 - 32047128
Alignment:
Q  629 tagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||| |||||||||||| |||| | || |||| | || |||| |||||| |||||||| |||||||||||    
T  32047206 tagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatat 32047128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 656
Target Start/End: Original strand, 35835649 - 35835679
Alignment:
Q  626 aagtagcctagtggctggagctcacacaatt 656  Q
    |||||||||||||||||||||||||||||||    
T  35835649 aagtagcctagtggctggagctcacacaatt 35835679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 48119590 - 48119556
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  48119590 aagtagcctagtggctagagctcacacaattaaat 48119556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 48719919 - 48719885
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  48719919 aagtagcctagtggctagagctcacacaattaaat 48719885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 16200679 - 16200598
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||| ||| ||| |||||||||| |||  || ||||||  | ||||||||||| ||||||||||||||||||||    
T  16200679 aagtagtctagtagctagagatcacacaatttaattgtggagaaatggggtgtctggggttcgaaccccgacccctgcatat 16200598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 24188590 - 24188509
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||   |||||||||||| |||  || |||| |  | ||||||||||| ||||||||||||||||||||    
T  24188590 aagtagcctagtggctatggctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccccgacccctgcatat 24188509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 705
Target Start/End: Complemental strand, 25155662 - 25155581
Alignment:
Q  624 ttaagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||| |||||||||  ||||||||||||||||| || |||| |  | ||||  ||||| ||||||||| |||||||||    
T  25155662 ttaagtaggctagtggctacagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccgaaccctgcata 25155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 31769462 - 31769543
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||  ||||||||||||| |||  || |||| ||   ||||||||||| |||||||||| |||||||||    
T  31769462 aagtagcctagtggctaaagctcacacaatttaattgtggagaagtagagtgtctggggttcgaaccccgactcctgcatat 31769543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 668
Target Start/End: Original strand, 47542929 - 47542970
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||    
T  47542929 agtagcctagtggctagagctcacaaaattaaatatggagaa 47542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 21339 - 21409
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||| ||||| ||||||||| |||| ||||||||||||||  ||||||||||||| |||||||||||    
T  21339 aaaatttaccacatcacatttttatagttcaaaaatatgatggagggaccaaaactgtcgaattttaaaat 21409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 705
Target Start/End: Original strand, 16133 - 16207
Alignment:
Q  631 gcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||  ||||||||||||||||| ||||||| | | |||||||||||| ||||||  |||||||||||    
T  16133 gcctagtggctaaagctcacacaattaaatgtgaagaagtgaaatgtctggggttcgaaccctaacccctgcata 16207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 3207815 - 3207885
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| || ||||||||||| ||||||||||| || |||||||||||    
T  3207815 aaaatttatcacatcacatttttatagtttaagaatatgatggagtgaccaaaactatcgaattttaaaat 3207885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 38255358 - 38255428
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| |||||||||  |||||||||||||||| |  ||||||||||||| |||||||||||    
T  38255358 aaaatttatcacattacatttttatggttaaaaaatatgatgcagggaccaaaactgtcgaattttaaaat 38255428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 38283242 - 38283164
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||| |||||||||||||| || |||| |  | ||||||||||| |||||||| ||||||||||    
T  38283242 agtagcctagtggctagagttcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcata 38283164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 776
Target Start/End: Original strand, 24587293 - 24587360
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaa 776  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||  ||||||||| ||| ||||||||    
T  24587293 aaaatttatcacatcacatttttatagttcaaaaatatgatggagagaccaaaaccgtcgaattttaa 24587360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 37708809 - 37708730
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  |||||| |||||| |||||||| |||||||||||    
T  37708809 gtagcctagtggctggagctcacacattttaaatgtggagaagtgggatgtccggggttcgaaccccggcccctgcatat 37708730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 784
Target Start/End: Original strand, 39186354 - 39186429
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaatgggga 784  Q
    |||||||||||||| ||||||||| | |||||||||| ||||||  ||||||||||||| ||||| ||||| ||||    
T  39186354 aaaatttatcacatcacatttttatacttaaaaaatacgatggagggaccaaaactgtcgaatttaaaaataggga 39186429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 706
Target Start/End: Complemental strand, 8183437 - 8183359
Alignment:
Q  629 tagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| ||||||||||||||||| || ||||||| |||| |  | ||||||||||| |||||||| |||||||||||    
T  8183437 tagcctaatggctggagctcacacattttaaatatggagaagtgggttgtctggggttcgaaccccggcccctgcatat 8183359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 16449245 - 16449164
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| |    ||||||||||| ||||||| ||||||||||||    
T  16449245 aagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccaacccctgcatat 16449164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 23178841 - 23178922
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | ||||||| |    |||| |||||| |||||||| |||||||||||    
T  23178841 aagtagcctagtggctagagctcacacaattaaattgtgaagaagtggagtgtccggggttcgaaccccggcccctgcatat 23178922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 5683873 - 5683793
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||| ||||| || |||||||||||  ||||| || |||| || | ||||||||||| ||||||| ||||||||||||    
T  5683873 aagtagcttagtgactagagctcacacatataaatgtggagaagtagggtgtctggggttcgaaccccaacccctgcatat 5683793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 22274562 - 22274642
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||||| | || |||| |  | |||| |||||| |||||||| | |||||||||    
T  22274562 aagtagcctagtggctagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggctcctgcatat 22274642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 39674009 - 39674089
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||| ||||||||| ||||||| |||||||||| ||||||| |  | ||||  ||||| ||||||| ||||||||||||    
T  39674009 aagtagtctagtggctagagctcatacaattaaatgtgaagaagtggggtgtccagggttcgaaccccaacccctgcatat 39674089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 706
Target Start/End: Original strand, 36035131 - 36035210
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||| | |||| ||||||||||||||||||||    
T  36035131 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatat 36035210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 656
Target Start/End: Complemental strand, 5038678 - 5038648
Alignment:
Q  626 aagtagcctagtggctggagctcacacaatt 656  Q
    |||||||||||||||||||||||||||||||    
T  5038678 aagtagcctagtggctggagctcacacaatt 5038648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 8265388 - 8265354
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  8265388 aagtagcctagtggctagagctcacacaattaaat 8265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 704
Target Start/End: Original strand, 11236875 - 11236953
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcat 704  Q
    |||||||||||||| | ||||||||||| |||||| | ||||| | || ||| ||||| | |||||||| |||||||||    
T  11236875 aagtagcctagtggatagagctcacacatttaaattttaagaagtgaggtgtttggggctcgaaccccggcccctgcat 11236953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 16432078 - 16432112
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  16432078 aagtagcctagtggctagagctcacacaattaaat 16432112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 20771548 - 20771478
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| ||||||| ||||||  | |||||| |||||| |||||||||    
T  20771548 aaaatttatcacatcacatttttatagttcaaaaatacgatggaggggccaaaattgtcaacttttaaaat 20771478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 20781342 - 20781272
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatgga-tgaccaaaactgtcaaattttaaaat 779  Q
    |||||||||||||| ||||||||| |||| ||||||| ||||||  | |||||| |||||| |||||||||    
T  20781342 aaaatttatcacatcacatttttatagttcaaaaatacgatggaggggccaaaattgtcaacttttaaaat 20781272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 25824854 - 25824932
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| |||||||| ||||||||||||||| || |  |||| |  | ||||||||||| |||||||||||| ||||||    
T  25824854 agtagcttagtggctagagctcacacaattatatgttgagaagtggggtgtctggggttcgaaccccgacccttgcata 25824932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 26395485 - 26395403
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaacccc-gacccctgcatat 706  Q
    ||||||||||||||||| ||||||||||| |||| | || ||||||  | ||||||||||| ||||||| | |||||||||||    
T  26395485 aagtagcctagtggctgtagctcacacaatttaattgtggagaaatggggtgtctggggttcgaaccccagccccctgcatat 26395403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 629 - 706
Target Start/End: Complemental strand, 33810757 - 33810679
Alignment:
Q  629 tagcctagtggctggagctcacacaatt-aaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||| |||||||||||||||||||| || |||| || |||| |  | |||| ||||||||||||||| |||||||||||    
T  33810757 tagcttagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggtttgaaccccggcccctgcatat 33810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 39169605 - 39169571
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  39169605 aagtagcctagtggctagagctcacacaattaaat 39169571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 43847053 - 43846975
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| |||||||||||||||||| || |||| |  | ||||  ||||| ||||  |||||||||||||    
T  43847053 agtagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcata 43846975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Complemental strand, 4293952 - 4293919
Alignment:
Q  673 gatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||| ||||||||||||||||||||    
T  4293952 gatgtctggggttcgaaccccgacccctgcatat 4293919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 5328517 - 5328598
Alignment:
Q  626 aagtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||  |||| | || |||| | || |||| |||||| |||||||| |||||||||||    
T  5328517 aagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatat 5328598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 633 - 706
Target Start/End: Complemental strand, 10083275 - 10083202
Alignment:
Q  633 ctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||| |||||||||||  |||||||| |||| |  | |||| |||||| ||||| ||||||||||||||    
T  10083275 ctagtggctagagctcacacatataaatatggagaagtggggtgtccggggttcgaacctcgacccctgcatat 10083202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 705
Target Start/End: Complemental strand, 12770477 - 12770408
Alignment:
Q  636 gtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| |||||||||||||||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  12770477 gtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 12770408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Complemental strand, 23858320 - 23858283
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaattaaat 660  Q
    ||||||||||||||||||| || |||||||||||||||    
T  23858320 gttaagtagcctagtggctagaactcacacaattaaat 23858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 34894489 - 34894408
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| || | || |||| |  | |||| |||||| |||||||| |||||||||||    
T  34894489 aagtagcctagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 34894408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Complemental strand, 37291045 - 37291012
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  37291045 gttaagtagcctagtggctagagctcacacaatt 37291012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 668
Target Start/End: Complemental strand, 44156821 - 44156788
Alignment:
Q  635 agtggctggagctcacacaattaaatatgaagaa 668  Q
    |||||||||||||||||||||||||| |||||||    
T  44156821 agtggctggagctcacacaattaaatgtgaagaa 44156788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 8571905 - 8571833
Alignment:
Q  633 ctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||| |||||||||||||||||| || |||| || | |||  |||||| |||||||||||||||||||    
T  8571905 ctagtggctagagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcata 8571833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 628 - 706
Target Start/End: Complemental strand, 3741072 - 3740993
Alignment:
Q  628 gtagcctagtggctggagctcacaca-attaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||||||||||||||||  |||||| || |||| |  | |||| |||||| ||||||||||||||||||||    
T  3741072 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatat 3740993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 635 - 705
Target Start/End: Complemental strand, 7171838 - 7171768
Alignment:
Q  635 agtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||||||||||||||||||||| | || |||| |  | ||||||||||| |||||||| ||||||||||    
T  7171838 agtggctggagctcacacaattaattgtggagaagtggggtgtctggggttcgaaccccggcccctgcata 7171768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 668
Target Start/End: Original strand, 5908270 - 5908311
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  5908270 agtagcctagtggctagagctcacacaattaaatatggagaa 5908311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 11188632 - 11188713
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| |    |||||||||||||||||||  |||||||||||    
T  11188632 aagtagcctagtggctagagctcacacaattaaattgtggagaagttgagtgtctggggtttgaaccccagcccctgcatat 11188713  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 17545122 - 17545203
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| |||| |||| |    |||| |||||| |||||||| |||||||||||    
T  17545122 aagtagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccggcccctgcatat 17545203  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 705
Target Start/End: Original strand, 22732316 - 22732396
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat-atgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| |||||||||||||||||||||||||||| ||| |||| |   ||||  |||||| ||||||||||| |||||||    
T  22732316 aagtagtctagtggctggagctcacacaattaaattatggagaagtgtaatgttcggggttcgaaccccgaccgctgcata 22732396  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 705
Target Start/End: Complemental strand, 4068101 - 4068022
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||| |||||| |||||||||||||||||||| || |||| |  | |||| |||||| ||||| || ||||||||||    
T  4068101 aagtagcgtagtggttggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcata 4068022  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 11535705 - 11535630
Alignment:
Q  630 agcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||||| ||||| |||||||||||||||||| ||||||| | || ||||  ||||| ||||| |||||||| ||||    
T  11535705 agcctaatggctagagctcacacaattaaatgtgaagaagtgaggtgtccagggttcgaaccacgacccctacata 11535630  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 705
Target Start/End: Original strand, 28758377 - 28758448
Alignment:
Q  635 agtggctggagctcacacaattaaatatgaagaaataagatgtctgg-ggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| |||||||||| || |||| | || |||| || ||||||||||||||| ||||||||    
T  28758377 agtggctggagctcatacaattaaatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcata 28758448  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Original strand, 13361190 - 13361260
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    ||||||||||||||  |||||||| | || ||| |||||||||| | || |||||||||||||||||||||    
T  13361190 aaaatttatcacatcccatttttataattcaaatatatgatggaaggactaaaactgtcaaattttaaaat 13361260  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Original strand, 22569195 - 22569229
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  22569195 aagtagcctagtggctagagctcacacaattaaat 22569229  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 28308354 - 28308320
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  28308354 aagtagcctagtggctagagctcacacaattaaat 28308320  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 660
Target Start/End: Original strand, 29646068 - 29646098
Alignment:
Q  630 agcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||||||||||||||||||    
T  29646068 agcctagtggctggagctcacacaattaaat 29646098  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 660
Target Start/End: Complemental strand, 36735992 - 36735958
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaat 660  Q
    |||||||||||||||| ||||||||||||||||||    
T  36735992 aagtagcctagtggctagagctcacacaattaaat 36735958  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Complemental strand, 6558921 - 6558840
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    ||||||||||||| || |||||||||||| |||| | || |||| || | |||| || ||| ||||||||||||||||||||    
T  6558921 aagtagcctagtgactagagctcacacaatttaattgtggagaagtagggtgtccggagttcgaaccccgacccctgcatat 6558840  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 656
Target Start/End: Original strand, 10804176 - 10804209
Alignment:
Q  623 gttaagtagcctagtggctggagctcacacaatt 656  Q
    ||||||||||||||||||| ||||||||||||||    
T  10804176 gttaagtagcctagtggctagagctcacacaatt 10804209  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 11246520 - 11246553
Alignment:
Q  673 gatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||||||    
T  11246520 gatgtctggggtttgagccccgacccctgcatat 11246553  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 668
Target Start/End: Complemental strand, 11313596 - 11313555
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  11313596 agtagcttagtggttggagctcacacaattaaatatgcagaa 11313555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 668
Target Start/End: Original strand, 19655924 - 19655965
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaa 668  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||    
T  19655924 agtagcctagtggctcgagcttacacaattaaatatggagaa 19655965  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 24477943 - 24477910
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaat 660  Q
    ||||| ||||||||||||||||||||||||||||    
T  24477943 agtagactagtggctggagctcacacaattaaat 24477910  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 700
Target Start/End: Original strand, 8864 - 8939
Alignment:
Q  626 aagtagcctagtggctggagctcacacaa-ttaaatatgaagaaataagatgtctggggtttgaaccccgacccct 700  Q
    |||||||||||||||| || ||||||||| |||| | ||||||||| || |||||| |||| ||||||||||||||    
T  8864 aagtagcctagtggctagaactcacacaatttaattgtgaagaaatgaggtgtctgaggttcgaaccccgacccct 8939  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 24498 - 24420
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| |    |||| |||||| |||||||| ||||||||||    
T  24498 agtagcctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcata 24420  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 28773 - 28851
Alignment:
Q  627 agtagcctagtggctggagctcacacaattaaatatgaagaaataagatgtctggggtttgaaccccgacccctgcata 705  Q
    |||| |||| |||||||||||||||||||||||| || |||| |  | |||| |||||| |||||||| ||||||||||    
T  28773 agtaacctaatggctggagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcata 28851  T

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Target: scaffold0445 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 3964 - 4045
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaa-tatgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| ||||||||||||||||| | || |||| |    ||||||||||| |||||||||| |||||||||    
T  3964 aagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccgactcctgcatat 4045  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 17650 - 17580
Alignment:
Q  710 aaaatttatcacataacatttttaaagttaaaaaatatgatggatg-accaaaactgtcaaattttaaaat 779  Q
    ||||||||||||||  ||||| || ||||||||||||||||||| | | ||||||| || |||||||||||    
T  17650 aaaatttatcacatcgcatttctatagttaaaaaatatgatggaagaatcaaaactatctaattttaaaat 17580  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 706
Target Start/End: Original strand, 10776 - 10857
Alignment:
Q  626 aagtagcctagtggctggagctcacacaattaaata-tgaagaaataagatgtctggggtttgaaccccgacccctgcatat 706  Q
    |||||||||||||||| |||||||||||||| |||  || |||| |  | |||| |||||| |||||||| |||||||||||    
T  10776 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatat 10857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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