View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5054_high_1 (Length: 571)

Name: NF5054_high_1
Description: NF5054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5054_high_1
NF5054_high_1
[»] chr7 (6 HSPs)
chr7 (166-553)||(48251049-48251450)
chr7 (57-158)||(30133932-30134031)
chr7 (57-158)||(49060421-49060522)
chr7 (101-158)||(30496629-30496686)
chr7 (100-153)||(44241784-44241837)
chr7 (57-149)||(27481391-27481483)
[»] chr2 (10 HSPs)
chr2 (1-189)||(32634169-32634357)
chr2 (54-158)||(11393454-11393558)
chr2 (54-158)||(11410115-11410219)
chr2 (59-158)||(5903184-5903283)
chr2 (104-158)||(25609724-25609778)
chr2 (107-152)||(10150686-10150731)
chr2 (57-158)||(33197327-33197428)
chr2 (53-158)||(35459787-35459892)
chr2 (100-152)||(6926535-6926587)
chr2 (109-153)||(15173459-15173503)
[»] chr5 (6 HSPs)
chr5 (58-154)||(26516180-26516276)
chr5 (57-158)||(35135750-35135851)
chr5 (57-158)||(20982223-20982324)
chr5 (107-151)||(16945076-16945120)
chr5 (116-156)||(13224369-13224409)
chr5 (57-153)||(29115306-29115402)
[»] chr3 (4 HSPs)
chr3 (55-158)||(43116516-43116619)
chr3 (102-153)||(21500866-21500917)
chr3 (105-152)||(42084345-42084392)
chr3 (85-153)||(16790181-16790249)
[»] chr8 (6 HSPs)
chr8 (55-153)||(4558677-4558775)
chr8 (107-152)||(32506988-32507033)
chr8 (100-153)||(40280298-40280351)
chr8 (100-158)||(4763842-4763900)
chr8 (100-158)||(39392749-39392807)
chr8 (101-153)||(2699231-2699283)
[»] scaffold0024 (1 HSPs)
scaffold0024 (57-158)||(27457-27558)
[»] chr6 (1 HSPs)
chr6 (57-158)||(33068649-33068750)
[»] chr4 (5 HSPs)
chr4 (59-156)||(7749172-7749269)
chr4 (100-153)||(44019447-44019500)
chr4 (107-153)||(20907104-20907150)
chr4 (108-158)||(51044547-51044597)
chr4 (57-154)||(485962-486059)
[»] chr1 (7 HSPs)
chr1 (59-152)||(29794016-29794109)
chr1 (120-154)||(38170785-38170819)
chr1 (57-158)||(38758534-38758636)
chr1 (121-155)||(51359496-51359530)
chr1 (60-152)||(37593763-37593856)
chr1 (116-153)||(52286618-52286655)
chr1 (57-153)||(17420084-17420180)
[»] scaffold0590 (1 HSPs)
scaffold0590 (101-158)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (101-158)||(2756-2813)


Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 166 - 553
Target Start/End: Original strand, 48251049 - 48251450
Alignment:
Q  166 atataatttgttttcataagctatctaatctatcatcttgaa-----------aatccaaattccagtgtgactttaagttaacatgtagctgaatacaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||||||||||||||||||||    
T  48251049 atataatttgttttcataagctatctaatctatcatcttgaagagcttatgaaaatccaaattccagtttgactttaagttaacatgtagctgaatacaa 48251148  T
Q  255 gttcaagttc------tactttcaatgctcatttcaagctactagttcatctgcttcnnnnnnnngtttatatatgtatttcaatttatttcctaaatta 348  Q
    ||||||||||      |||||||||||||||||||||||||||||||||||||||||         ||| | ||||||||||||||||||||||||||||    
T  48251149 gttcaagttcaagttctactttcaatgctcatttcaagctactagttcatctgcttctttttt---tttgtttatgtatttcaatttatttcctaaatta 48251245  T
Q  349 tgttactgtttctttcttttcagaatcccgtaagttttctctgcatcagactagagcttcttcttcagaagaaacatctacttctctcgataccaatgag 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48251246 tgttactgtttctttcttttcagaatcccgtaagttttctctgcatcagactagagcttcttcttcagaagaaacatctacttctctcgataccaatgag 48251345  T
Q  449 ttgttcacagatttgaaggaaaaggcaagaagcttataaattggttcattttatttaagaatttagctctattttgaaataattttgtaaaatcgataat 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48251346 ttgttcacagatttgaaggaaaaggcaagaagcttataaattggttcattttatttaagaatttagctccattttgaaataattttgtaaaatcgataat 48251445  T
Q  549 gttcc 553  Q
    |||||    
T  48251446 gttcc 48251450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 30133932 - 30134031
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||||||| || |||| || ||||||| || ||| | ||||||  ||||||| |||||||||| ||||| ||||| ||||||||||||||| ||    
T  30133932 tgtttggataaacaactcaattaaatgcttatagcataagcgcttatca--taagtgtttatgtataagctatttttacaacaaaagataaaataaagtc 30134029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 49060421 - 49060522
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    ||||||| |||||||||||||| | | ||||||  | || || |||||| |||||| | |||||||||| |||||||| || |||| |||||||||| ||    
T  49060421 tgtttgggtaaacagcttaattaagcacttatagtataatggcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtc 49060520  T
Q  157 aa 158  Q
    ||    
T  49060521 aa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 30496629 - 30496686
Alignment:
Q  101 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    |||||||||||||| |||||||||  |||||||| || |||| |||||||||| ||||    
T  30496629 tatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 44241784 - 44241837
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||| |||||||| |||||||||| |||||||| || || ||||||||||||    
T  44241784 ttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaa 44241837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 27481483 - 27481391
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaa 149  Q
    |||||||||||||| |||||||    ||||||| || ||  |||||| | |||||||| |||||||||| |||||||| || ||| |||||||    
T  27481483 tgtttggataaacaacttaattaggtgcttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaa 27481391  T

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Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 32634169 - 32634357
Alignment:
Q  1 tatttgaaataatgcaggatttcaatcctttgctaagtaagcggatacttataccttgtttggataaacagcttaatttaacgcttataccacaagggtt 100  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  32634169 tatttgaaataacacaggattttaatcctttgctaagtaagcggatacttataccttgtttggataaacaacttaatttaacgcttataccataagggtt 32634268  T
Q  101 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaannnnnnnatataatttgttttcataagctat 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||    
T  32634269 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaatttttttatataagttgttttcataagctat 32634357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 11393558 - 11393454
Alignment:
Q  54 ccttgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||||||||||||||||||||||| | | |||||| |||||| |||||||| |||||||  ||| |||||| |||||||| |  |||||||| ||||||    
T  11393558 ccttgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaa 11393459  T
Q  154 atcaa 158  Q
     ||||    
T  11393458 ttcaa 11393454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 11410219 - 11410115
Alignment:
Q  54 ccttgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||||||||||||||||||||||| | | |||||| |||||| |||||||| |||||||  ||| |||||| |||||||| |  |||||||| ||||||    
T  11410219 ccttgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaa 11410120  T
Q  154 atcaa 158  Q
     ||||    
T  11410119 ttcaa 11410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 5903184 - 5903283
Alignment:
Q  59 tttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    ||||||||||||||||||||||| | ||||| |||||| |||||| | ||||||   |||| ||| | |||||||| || |||| |||||||||| ||||    
T  5903184 tttggataaacagcttaatttaatggttatagcacaagcgtttattatataagttcttatgcatacgttatttctataacaaaatataaaataaagtcaa 5903283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 25609724 - 25609778
Alignment:
Q  104 cacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    ||||||||||  |||||||||| |||||||| |||||||||||||||||| ||||    
T  25609724 cacataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaa 25609778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 10150686 - 10150731
Alignment:
Q  107 ataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    |||||||| |||||||||| |||||||| || ||||||||||||||    
T  10150686 ataagtgtttatgtataagttatttctataataaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 33197428 - 33197327
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||||||| || |||| ||| |||||| || ||  | |||||| |||||||  ||| |||||| |||||||| || |||||||| |||||| ||    
T  33197428 tgtttggataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtc 33197329  T
Q  157 aa 158  Q
    ||    
T  33197328 aa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 35459787 - 35459892
Alignment:
Q  53 accttgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    ||||||||||  |||| ||||||||| | | |||||| || ||| |||||||| |||||||  | |||||||| ||||| || |  ||||||||||||||    
T  35459787 accttgtttgagtaaatagcttaattcagctcttatagcataagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataa 35459886  T
Q  153 aatcaa 158  Q
    | ||||    
T  35459887 agtcaa 35459892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 6926587 - 6926535
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    |||||| |||| ||| ||||||||||  |||| ||||||||||||||||||||    
T  6926587 ttatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataa 6926535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 15173459 - 15173503
Alignment:
Q  109 aagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||||||||||||||| |||||||| || ||||||| |||||||    
T  15173459 aagtgtctatgtataagttatttctataacaaaagatgaaataaa 15173503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 26516180 - 26516276
Alignment:
Q  58 gtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaa 154  Q
    ||||||||||||| ||||||| | |||||||| || ||| | |||||| |||||||  |||||||||| |||||||| || ||||||||||||||||    
T  26516180 gtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaaa 26516276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 35135851 - 35135750
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||| ||||||||| ||||||| ||| || ||| || ||| | ||| || |||||||| ||||||||||||||||||| || ||||||||||||||| ||    
T  35135851 tgttgggataaacaacttaattcaacactcatagcataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtc 35135752  T
Q  157 aa 158  Q
    ||    
T  35135751 aa 35135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 20982324 - 20982223
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||||||| ||| ||| |  ||||||| || ||| | |||||| |||||||  |||||||||| |||||||| || ||| ||||||||||| ||    
T  20982324 tgtttggataaacaacttcattaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtc 20982225  T
Q  157 aa 158  Q
    ||    
T  20982224 aa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 16945120 - 16945076
Alignment:
Q  107 ataagtgtctatgtataagatatttctacaagaaaagataaaata 151  Q
    |||||||  |||||||||| |||||||||||||||||||||||||    
T  16945120 ataagtgcttatgtataagctatttctacaagaaaagataaaata 16945076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 13224369 - 13224409
Alignment:
Q  116 tatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||| |||||||| || ||||||||||||||||||    
T  13224369 tatgtataagctatttctataacaaaagataaaataaaatc 13224409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 29115402 - 29115306
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||||||||||||  ||||||   |||||||| || ||   ||||||| | |||||  |||||||||| ||||||||||| ||||| |||||||||    
T  29115402 tgtttggataaacactttaattacgcgcttatagcataaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaa 29115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 43116619 - 43116516
Alignment:
Q  55 cttgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaa 154  Q
    |||||||||||||||| |||||||||  | ||||| || ||  |||||||| | |||||| ||||| |||| |||||||| || |||||||||||| |||    
T  43116619 cttgtttggataaacaacttaatttagtgtttatagcataaatgtttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaa 43116520  T
Q  155 tcaa 158  Q
    ||||    
T  43116519 tcaa 43116516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 21500866 - 21500917
Alignment:
Q  102 atcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||| |||||||||||||||||||||||||||| ||  ||| ||||||||||    
T  21500866 atcatataagtgtctatgtataagatatttctataattaaatataaaataaa 21500917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 42084392 - 42084345
Alignment:
Q  105 acataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    ||||||||||||||||||||| |||||||| || ||| ||||||||||    
T  42084392 acataagtgtctatgtataagctatttctataacaaaggataaaataa 42084345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 16790249 - 16790181
Alignment:
Q  85 ttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||| || ||| |||||||| |||||||  ||| |||||| |||||||| || |||||||||||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 4558677 - 4558775
Alignment:
Q  55 cttgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||||||||||||| |||||||   |||||||| || ||  |||||| |  ||||||| |||||||||| |||||||| || |||||||||||||||    
T  4558677 cttgtttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaa 4558775  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 32506988 - 32507033
Alignment:
Q  107 ataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||    
T  32506988 ataagtgtttatgtataagttatttctacaacaaaagataaaataa 32507033  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 40280351 - 40280298
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||| ||||||| |||| |||||| ||||||||||| |||||||||||||||    
T  40280351 ttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaa 40280298  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 4763842 - 4763900
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    |||| |||||||||| |||| ||||| |||||| |||| ||||||||||||||| ||||    
T  4763842 ttattacataagtgtttatgcataagttatttcgacaacaaaagataaaataaattcaa 4763900  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 39392807 - 39392749
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    |||||| ||||||| ||||||||||  |||||||| || ||||||||||||||| ||||    
T  39392807 ttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 2699231 - 2699283
Alignment:
Q  101 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    ||||| ||| |||||||| |||||| ||||||||||| |||| ||||||||||    
T  2699231 tatcatatacgtgtctatatataagttatttctacaacaaaatataaaataaa 2699283  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 27457 - 27558
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||||||| ||||| | |||||||||| || |||   ||||||  ||||||  |||||||||| |||||||| || | ||||||||||||| ||    
T  27457 tgtttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtc 27556  T
Q  157 aa 158  Q
    ||    
T  27557 aa 27558  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 33068750 - 33068649
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    ||||||||| |||||||||||| |  | ||||| || ||| | |||||| |||| ||  |||||||||| |||||||| || |||||||||||||| |||    
T  33068750 tgtttggatgaacagcttaattaagtgtttatagcataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatc 33068651  T
Q  157 aa 158  Q
    ||    
T  33068650 aa 33068649  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 7749269 - 7749172
Alignment:
Q  59 tttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatc 156  Q
    |||||||||||| ||||| | | | |||||| || ||| ||||| || |||||||| |||||||| | |||||||| || |||||| |||||||||||    
T  7749269 tttggataaacaacttaactaagctcttatagcataagtgtttaccatataagtgtttatgtatacgctatttctataataaaagagaaaataaaatc 7749172  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 44019447 - 44019500
Alignment:
Q  100 ttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||| |||||||| |||||||| | |||||||| ||||||||||||||||||    
T  44019447 ttatcagataagtgtgtatgtataggctatttctataagaaaagataaaataaa 44019500  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 20907104 - 20907150
Alignment:
Q  107 ataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||||| |||||||||| ||||| || ||||||||||||||||||    
T  20907104 ataagtgtttatgtataagctatttgtataagaaaagataaaataaa 20907150  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 51044597 - 51044547
Alignment:
Q  108 taagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    ||||||| |||||||||| |||||||| || ||||||||||||||| ||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 485962 - 486059
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaa 154  Q
    ||||||||| |||  ||||||| | |||||||| || ||| | |||||| | |||||  |||||||| | |||||||| || ||||||||||||||||    
T  485962 tgtttggatgaactacttaattaagcgcttatagcataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaa 486059  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000008; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 29794109 - 29794016
Alignment:
Q  59 tttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    |||||||||||||||||||| | |||||||| || ||| |||| ||| ||| |||| |||||||| | ||||| |  || ||||||||||||||    
T  29794109 tttggataaacagcttaattaagcgcttatagcataagtgtttttcatatatgtgtttatgtataggctatttttgtaacaaaagataaaataa 29794016  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 38170819 - 38170785
Alignment:
Q  120 tataagatatttctacaagaaaagataaaataaaa 154  Q
    |||||||||||||||||| ||||||||||||||||    
T  38170819 tataagatatttctacaacaaaagataaaataaaa 38170785  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 38758636 - 38758534
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttct-acaagaaaagataaaataaaat 155  Q
    |||||||||||||| ||||||| |  || |||| || ||| | | ||||||||||||| |||||||||| | ||||| | || ||||||| |||||||||    
T  38758636 tgtttggataaacaacttaattaatagcctataacataagcgctcatcacataagtgtttatgtataagctgtttctaataataaaagatgaaataaaat 38758537  T
Q  156 caa 158  Q
    |||    
T  38758536 caa 38758534  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 51359496 - 51359530
Alignment:
Q  121 ataagatatttctacaagaaaagataaaataaaat 155  Q
    ||||| |||||||||||||||||||||||||||||    
T  51359496 ataagttatttctacaagaaaagataaaataaaat 51359530  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 37593856 - 37593763
Alignment:
Q  60 ttggataaacagcttaatttaacgcttataccacaagggtttatcac-ataagtgtctatgtataagatatttctacaagaaaagataaaataa 152  Q
    ||||||||||| ||||||||   ||||| | || ||| | ||||||| |||||||| |||||||||| |||||||| || | ||||||||||||    
T  37593856 ttggataaacaacttaatttgcagcttaaagcaaaagcgcttatcacgataagtgtttatgtataaggtatttctataacacaagataaaataa 37593763  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 52286618 - 52286655
Alignment:
Q  116 tatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  52286618 tatgaataagatatttctacaacaaaagataaaataaa 52286655  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 17420084 - 17420180
Alignment:
Q  57 tgtttggataaacagcttaatttaacgcttataccacaagggtttatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaa 153  Q
    |||||||||||||||||||||| |  | |||||  | ||| | ||| |||||||||   |||||||||  ||||| || ||||||||||||||||||    
T  17420084 tgtttggataaacagcttaattaagtgattatagtataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaa 17420180  T

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Target: scaffold0590 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  101 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    ||||| |||||||  |||||||||| |||||||| || ||||||||||||||| ||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

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Target: scaffold0275 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  101 tatcacataagtgtctatgtataagatatttctacaagaaaagataaaataaaatcaa 158  Q
    ||||| |||||||  |||||||||| |||||||| || ||||||||||||||| ||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

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