View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5054_high_5 (Length: 344)

Name: NF5054_high_5
Description: NF5054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5054_high_5
NF5054_high_5
[»] chr2 (31 HSPs)
chr2 (91-327)||(16068524-16068766)
chr2 (1-40)||(16068758-16068797)
chr2 (41-79)||(22093493-22093531)
chr2 (41-79)||(24858151-24858189)
chr2 (41-79)||(40324634-40324672)
chr2 (42-79)||(24894970-24895007)
chr2 (38-79)||(38731276-38731317)
chr2 (35-79)||(1375436-1375480)
chr2 (40-79)||(21552540-21552579)
chr2 (40-79)||(22194723-22194762)
chr2 (36-79)||(24205289-24205332)
chr2 (40-79)||(39642728-39642767)
chr2 (44-79)||(41829740-41829775)
chr2 (41-79)||(1467083-1467121)
chr2 (41-79)||(12542432-12542470)
chr2 (41-79)||(20436058-20436096)
chr2 (41-79)||(24895186-24895224)
chr2 (41-79)||(31784252-31784290)
chr2 (41-79)||(31784526-31784564)
chr2 (41-79)||(33004709-33004747)
chr2 (41-79)||(39374100-39374138)
chr2 (41-79)||(40493920-40493958)
chr2 (42-79)||(15977484-15977521)
chr2 (42-79)||(21568200-21568237)
chr2 (38-79)||(34470026-34470067)
chr2 (38-79)||(36987688-36987729)
chr2 (39-79)||(20494337-20494377)
chr2 (35-79)||(24857877-24857921)
chr2 (35-79)||(39431444-39431488)
chr2 (39-79)||(40493644-40493684)
chr2 (41-77)||(44245246-44245282)
[»] chr1 (49 HSPs)
chr1 (40-91)||(866407-866458)
chr1 (35-79)||(6491410-6491454)
chr1 (40-79)||(12071920-12071959)
chr1 (40-79)||(40815141-40815180)
chr1 (40-79)||(41585284-41585323)
chr1 (41-79)||(3383964-3384002)
chr1 (41-79)||(6809068-6809106)
chr1 (41-79)||(8028960-8028998)
chr1 (42-79)||(30288474-30288511)
chr1 (41-90)||(33777166-33777215)
chr1 (43-79)||(29704619-29704655)
chr1 (35-79)||(32341767-32341811)
chr1 (39-79)||(37029203-37029243)
chr1 (35-79)||(39427405-39427449)
chr1 (43-79)||(45680093-45680129)
chr1 (40-79)||(6183257-6183296)
chr1 (40-79)||(6491691-6491730)
chr1 (44-79)||(9332906-9332941)
chr1 (44-79)||(9356679-9356714)
chr1 (40-79)||(13791850-13791889)
chr1 (40-79)||(18589848-18589887)
chr1 (40-79)||(18590105-18590144)
chr1 (40-79)||(22075626-22075665)
chr1 (40-79)||(28503411-28503450)
chr1 (40-79)||(38622678-38622717)
chr1 (40-79)||(47764090-47764129)
chr1 (40-79)||(52149789-52149828)
chr1 (41-79)||(4243402-4243440)
chr1 (41-79)||(8770463-8770501)
chr1 (41-79)||(11018677-11018715)
chr1 (41-79)||(16491250-16491288)
chr1 (41-79)||(22204305-22204343)
chr1 (41-79)||(22204581-22204619)
chr1 (41-79)||(23341964-23342002)
chr1 (41-79)||(37028928-37028966)
chr1 (41-79)||(43677103-43677141)
chr1 (41-79)||(43914855-43914893)
chr1 (41-79)||(45884948-45884986)
chr1 (41-79)||(46320951-46320989)
chr1 (41-79)||(52143440-52143478)
chr1 (42-79)||(8029232-8029269)
chr1 (42-79)||(13098032-13098069)
chr1 (42-79)||(41585560-41585597)
chr1 (35-79)||(12690015-12690059)
chr1 (43-79)||(21727890-21727926)
chr1 (39-79)||(27855561-27855601)
chr1 (35-79)||(28503129-28503173)
chr1 (35-79)||(43914572-43914616)
chr1 (41-77)||(47113664-47113700)
[»] chr8 (43 HSPs)
chr8 (39-91)||(7318898-7318950)
chr8 (41-79)||(7013625-7013663)
chr8 (41-79)||(994993-995031)
chr8 (41-79)||(41625460-41625498)
chr8 (41-79)||(42866152-42866190)
chr8 (35-79)||(4167475-4167519)
chr8 (35-79)||(6745269-6745313)
chr8 (40-79)||(4107123-4107162)
chr8 (40-79)||(6641873-6641912)
chr8 (36-79)||(7013344-7013387)
chr8 (40-79)||(23233780-23233819)
chr8 (40-79)||(30358842-30358881)
chr8 (44-79)||(33881362-33881397)
chr8 (35-90)||(45022595-45022650)
chr8 (41-79)||(414930-414968)
chr8 (41-79)||(2321516-2321554)
chr8 (41-79)||(4132754-4132792)
chr8 (41-79)||(6014419-6014457)
chr8 (41-79)||(6014693-6014731)
chr8 (41-79)||(6335603-6335641)
chr8 (41-79)||(15187928-15187966)
chr8 (41-79)||(17943358-17943396)
chr8 (41-79)||(20819752-20819790)
chr8 (41-79)||(23234055-23234093)
chr8 (41-79)||(29233780-29233818)
chr8 (41-79)||(31191745-31191783)
chr8 (41-79)||(37639507-37639545)
chr8 (41-79)||(37953374-37953412)
chr8 (41-79)||(42267456-42267494)
chr8 (41-79)||(42866368-42866406)
chr8 (41-79)||(42906372-42906410)
chr8 (41-79)||(45106435-45106473)
chr8 (30-75)||(1985558-1985603)
chr8 (42-79)||(6335333-6335370)
chr8 (39-79)||(5734460-5734500)
chr8 (35-79)||(6655553-6655597)
chr8 (35-79)||(6735955-6735999)
chr8 (35-79)||(8287879-8287923)
chr8 (35-79)||(18530826-18530870)
chr8 (35-79)||(18553246-18553290)
chr8 (35-79)||(32332134-32332178)
chr8 (35-79)||(37205816-37205860)
chr8 (35-79)||(45209251-45209295)
[»] chr3 (53 HSPs)
chr3 (41-91)||(14904442-14904492)
chr3 (35-79)||(22202758-22202802)
chr3 (40-79)||(38511658-38511697)
chr3 (40-79)||(51842800-51842839)
chr3 (41-79)||(9630768-9630806)
chr3 (41-79)||(14004109-14004147)
chr3 (41-79)||(36373820-36373858)
chr3 (41-79)||(45744174-45744212)
chr3 (41-79)||(47943459-47943497)
chr3 (41-79)||(49997931-49997969)
chr3 (35-79)||(32459058-32459102)
chr3 (35-79)||(33576684-33576728)
chr3 (43-79)||(33622141-33622177)
chr3 (35-79)||(50033307-50033351)
chr3 (40-79)||(2118989-2119028)
chr3 (40-79)||(17483560-17483599)
chr3 (40-79)||(17483833-17483872)
chr3 (44-91)||(39708013-39708060)
chr3 (40-79)||(41282122-41282161)
chr3 (36-79)||(42230028-42230071)
chr3 (40-79)||(45760508-45760547)
chr3 (40-79)||(51213306-51213345)
chr3 (41-79)||(7858237-7858275)
chr3 (41-79)||(9153477-9153515)
chr3 (41-79)||(19914476-19914514)
chr3 (41-79)||(21841986-21842024)
chr3 (41-79)||(25126273-25126311)
chr3 (41-79)||(26012685-26012723)
chr3 (41-79)||(31117620-31117658)
chr3 (41-79)||(32204848-32204886)
chr3 (41-79)||(32205122-32205160)
chr3 (41-79)||(32508194-32508232)
chr3 (41-79)||(38511932-38511970)
chr3 (36-90)||(39589004-39589058)
chr3 (41-79)||(41223513-41223551)
chr3 (41-79)||(44624501-44624539)
chr3 (41-79)||(47943735-47943773)
chr3 (41-79)||(51214434-51214472)
chr3 (41-79)||(52613342-52613380)
chr3 (41-79)||(53531806-53531844)
chr3 (38-79)||(8727910-8727951)
chr3 (38-79)||(9079797-9079838)
chr3 (38-79)||(22202481-22202522)
chr3 (42-79)||(24393967-24394004)
chr3 (42-79)||(36441599-36441636)
chr3 (42-79)||(49859726-49859763)
chr3 (42-79)||(52613597-52613634)
chr3 (43-79)||(27719961-27719997)
chr3 (35-79)||(28097699-28097743)
chr3 (35-79)||(32507921-32507965)
chr3 (35-79)||(37181998-37182042)
chr3 (43-79)||(39905730-39905766)
chr3 (35-79)||(53192108-53192152)
[»] chr5 (41 HSPs)
chr5 (43-92)||(33749249-33749298)
chr5 (40-79)||(39244-39283)
chr5 (41-91)||(15221477-15221527)
chr5 (41-79)||(16666073-16666111)
chr5 (42-79)||(3728539-3728576)
chr5 (46-79)||(9559859-9559892)
chr5 (42-79)||(22773860-22773897)
chr5 (35-79)||(223169-223213)
chr5 (35-79)||(4096726-4096770)
chr5 (43-79)||(16329854-16329890)
chr5 (41-77)||(22627260-22627296)
chr5 (35-79)||(23263139-23263183)
chr5 (35-79)||(30894391-30894435)
chr5 (39-79)||(34082097-34082137)
chr5 (35-79)||(34606645-34606689)
chr5 (40-79)||(8339958-8339997)
chr5 (40-79)||(12610549-12610588)
chr5 (44-79)||(16597044-16597079)
chr5 (40-79)||(26323650-26323689)
chr5 (40-79)||(34169063-34169102)
chr5 (41-79)||(931847-931885)
chr5 (41-79)||(2710612-2710650)
chr5 (41-79)||(3020869-3020907)
chr5 (41-79)||(6815704-6815742)
chr5 (41-79)||(13960965-13961003)
chr5 (41-79)||(25631086-25631124)
chr5 (41-79)||(29559774-29559812)
chr5 (41-79)||(31456136-31456174)
chr5 (41-79)||(34082376-34082414)
chr5 (41-79)||(34734348-34734386)
chr5 (41-79)||(35306977-35307015)
chr5 (41-79)||(40687666-40687704)
chr5 (41-79)||(40687944-40687982)
chr5 (41-79)||(41032461-41032499)
chr5 (35-79)||(4125438-4125482)
chr5 (35-79)||(12049113-12049157)
chr5 (35-79)||(14647690-14647734)
chr5 (35-79)||(15738348-15738392)
chr5 (35-79)||(28736715-28736759)
chr5 (39-79)||(31455880-31455920)
chr5 (43-79)||(40767890-40767926)
[»] chr7 (34 HSPs)
chr7 (32-79)||(21917077-21917124)
chr7 (41-79)||(3931646-3931684)
chr7 (41-79)||(35121413-35121451)
chr7 (35-79)||(3925787-3925831)
chr7 (35-79)||(10318885-10318929)
chr7 (39-79)||(45231520-45231560)
chr7 (40-79)||(388176-388215)
chr7 (40-79)||(10319168-10319207)
chr7 (40-79)||(23910130-23910169)
chr7 (40-79)||(30699299-30699338)
chr7 (40-79)||(38445681-38445720)
chr7 (36-79)||(43408479-43408522)
chr7 (37-79)||(930704-930746)
chr7 (41-79)||(930983-931021)
chr7 (41-79)||(18852495-18852533)
chr7 (41-79)||(19194436-19194474)
chr7 (41-79)||(19778529-19778567)
chr7 (41-79)||(21917525-21917563)
chr7 (41-79)||(23909895-23909933)
chr7 (41-79)||(25986925-25986963)
chr7 (41-79)||(26612618-26612656)
chr7 (41-79)||(30699023-30699061)
chr7 (41-79)||(34533488-34533526)
chr7 (41-79)||(35121688-35121726)
chr7 (41-79)||(37452324-37452362)
chr7 (41-79)||(38879161-38879199)
chr7 (41-79)||(41445973-41446011)
chr7 (42-79)||(25036308-25036345)
chr7 (38-79)||(42997327-42997368)
chr7 (35-79)||(228233-228277)
chr7 (35-79)||(10350800-10350844)
chr7 (43-79)||(20588430-20588466)
chr7 (35-79)||(27513076-27513120)
chr7 (43-79)||(37047941-37047977)
[»] chr6 (30 HSPs)
chr6 (41-92)||(9126637-9126688)
chr6 (40-79)||(18683011-18683050)
chr6 (41-79)||(5606296-5606334)
chr6 (41-79)||(5606572-5606610)
chr6 (42-79)||(28930465-28930502)
chr6 (39-79)||(11746254-11746294)
chr6 (23-79)||(13042683-13042739)
chr6 (35-79)||(17965833-17965877)
chr6 (35-79)||(31740763-31740807)
chr6 (40-79)||(1814975-1815014)
chr6 (40-79)||(3195987-3196026)
chr6 (40-79)||(10894145-10894184)
chr6 (40-79)||(10977657-10977696)
chr6 (44-79)||(11445979-11446014)
chr6 (40-79)||(28930739-28930778)
chr6 (41-79)||(2100380-2100418)
chr6 (41-79)||(2100656-2100694)
chr6 (41-79)||(2565078-2565116)
chr6 (41-79)||(2565354-2565392)
chr6 (41-79)||(7391752-7391790)
chr6 (41-79)||(11322300-11322338)
chr6 (41-79)||(14168576-14168614)
chr6 (41-79)||(30818490-30818528)
chr6 (41-79)||(30965691-30965729)
chr6 (38-79)||(20630624-20630665)
chr6 (42-79)||(31833267-31833304)
chr6 (31-59)||(929197-929225)
chr6 (43-79)||(3195718-3195754)
chr6 (39-79)||(6261379-6261419)
chr6 (35-79)||(10893883-10893927)
[»] chr4 (51 HSPs)
chr4 (40-79)||(3770435-3770474)
chr4 (40-79)||(20466384-20466423)
chr4 (40-79)||(35083856-35083895)
chr4 (41-79)||(7119869-7119907)
chr4 (41-79)||(29432322-29432360)
chr4 (41-79)||(55586616-55586654)
chr4 (42-79)||(37289731-37289768)
chr4 (38-79)||(54216232-54216273)
chr4 (43-79)||(26171515-26171551)
chr4 (35-79)||(49869247-49869291)
chr4 (40-79)||(13019272-13019311)
chr4 (44-79)||(28158899-28158934)
chr4 (44-79)||(34158748-34158783)
chr4 (40-79)||(34363093-34363132)
chr4 (40-79)||(48278191-48278230)
chr4 (41-79)||(232966-233004)
chr4 (41-79)||(5344270-5344308)
chr4 (41-79)||(7644457-7644495)
chr4 (41-79)||(7705864-7705902)
chr4 (41-79)||(8483135-8483173)
chr4 (41-79)||(10046211-10046249)
chr4 (41-79)||(11530035-11530073)
chr4 (41-79)||(12640820-12640858)
chr4 (41-79)||(14578715-14578753)
chr4 (41-79)||(17554321-17554359)
chr4 (41-79)||(18988179-18988217)
chr4 (41-79)||(21537152-21537190)
chr4 (41-79)||(24542754-24542792)
chr4 (41-79)||(31250744-31250782)
chr4 (41-79)||(34362820-34362858)
chr4 (41-79)||(34957378-34957415)
chr4 (41-79)||(38371271-38371309)
chr4 (41-79)||(39136298-39136336)
chr4 (41-79)||(44921885-44921923)
chr4 (41-79)||(45289775-45289813)
chr4 (41-79)||(47853976-47854014)
chr4 (41-79)||(52114409-52114447)
chr4 (38-79)||(1186963-1187004)
chr4 (38-79)||(9592406-9592447)
chr4 (38-79)||(11159695-11159736)
chr4 (38-79)||(21536877-21536918)
chr4 (42-79)||(22159830-22159867)
chr4 (30-79)||(51696525-51696574)
chr4 (35-79)||(7666194-7666238)
chr4 (39-79)||(18988455-18988495)
chr4 (39-79)||(24543018-24543058)
chr4 (41-77)||(35835776-35835812)
chr4 (43-79)||(37432493-37432529)
chr4 (41-77)||(38371541-38371577)
chr4 (43-79)||(41707720-41707756)
chr4 (43-79)||(50513317-50513353)
[»] scaffold1067 (1 HSPs)
scaffold1067 (41-79)||(1355-1393)
[»] scaffold0272 (2 HSPs)
scaffold0272 (41-79)||(20868-20906)
scaffold0272 (31-79)||(10549-10597)
[»] scaffold0236 (1 HSPs)
scaffold0236 (40-79)||(23123-23162)
[»] scaffold0182 (2 HSPs)
scaffold0182 (44-79)||(12050-12085)
scaffold0182 (41-79)||(20595-20633)
[»] scaffold0014 (1 HSPs)
scaffold0014 (41-79)||(79262-79300)
[»] scaffold0005 (1 HSPs)
scaffold0005 (41-79)||(238622-238660)
[»] scaffold0213 (1 HSPs)
scaffold0213 (40-77)||(21065-21102)
[»] scaffold0594 (1 HSPs)
scaffold0594 (35-79)||(5868-5912)
[»] scaffold0474 (1 HSPs)
scaffold0474 (35-79)||(7715-7759)
[»] scaffold0328 (1 HSPs)
scaffold0328 (39-79)||(16029-16069)
[»] scaffold0022 (1 HSPs)
scaffold0022 (35-79)||(139169-139213)
[»] scaffold0001 (1 HSPs)
scaffold0001 (35-79)||(400981-401025)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 9e-92; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 91 - 327
Target Start/End: Complemental strand, 16068766 - 16068524
Alignment:
Q  91 tacaaaaatagtacatcacgagcaaccatgttcgcaactttatttctattgcgatgaacatgggtgagttaagaaaagaaaaactacttatcctta---- 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        
T  16068766 tacaaaaatagtacatcacgagcaaccatgttcacaactttatttctattgcgatgaacatgggtgagttaagaaaagaaaaactacttattcttaatct 16068667  T
Q  187 ------taattcctccccaatatatatatgatttcaaattttagtgttacaatttagggtttttgtaattgttttacaatcgattacaaacataacactt 280  Q
          ||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16068666 gatctataattcctccccaatatata----atttcaaattttagtgttacaatttagggtttttgtaattgttttacaatcgattacaaacaaaacactt 16068571  T
Q  281 ttgatgcaataatcaacggaaaaatcgaccaatttctgtaaaacttg 327  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||||    
T  16068570 ttgatgcaacaatcaacggaaaaatcgaccgatttctttaaaacttg 16068524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16068797 - 16068758
Alignment:
Q  1 aggaattcaacctatccaggttttatcaggatacaaaaat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16068797 aggaattcaacctatccaggttttatcaggatacaaaaat 16068758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 22093531 - 22093493
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22093531 ggcttaattgcacttttggatccctatcttttcaaaagt 22093493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 24858189 - 24858151
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  24858189 ggcttaattgcacttttggatccctatcttttcaaaagt 24858151  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 40324634 - 40324672
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  40324634 ggcttaattgcacttttggatccctatcttttcaaaagt 40324672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 24894970 - 24895007
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24894970 gcttaattgcacttttggatccctatcttttcaaaagt 24895007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 38731276 - 38731317
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  38731276 aatggcttaattgcacttttggacccctatcttttcaaaagt 38731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 1375480 - 1375436
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||    
T  1375480 aaaaatgacttaattgcacttttggacccctatcttttcaaaagt 1375436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 21552540 - 21552579
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  21552540 tggcttaattgcacttttggacccctatcttttcaaaagt 21552579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 22194762 - 22194723
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  22194762 tggcttaattgcacttttggacccctatcttttcaaaagt 22194723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 24205289 - 24205332
Alignment:
Q  36 aaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| |||||||||||||||||||| | ||||||||||||||||    
T  24205289 aaaaaggcttaattgcacttttggacccctatcttttcaaaagt 24205332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 39642728 - 39642767
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  39642728 tggcttaattgcacttttggacccctatcttttcaaaagt 39642767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 41829775 - 41829740
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  41829775 ttaattgcacttttggacctctatcttttcaaaagt 41829740  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 1467121 - 1467083
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  1467121 ggcttaattgcacttttggacccctatcttttcaaaagt 1467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 12542470 - 12542432
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  12542470 ggcttaattgcacttttggccctctatcttttcaaaagt 12542432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 20436058 - 20436096
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  20436058 ggcttaattgcacttttggacccctatcttttcaaaagt 20436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 24895224 - 24895186
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  24895224 ggcttaattgcacttttggacccctatcttttcaaaagt 24895186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 31784252 - 31784290
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  31784252 ggcttaattgcacttttggacccctatcttttcaaaagt 31784290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 31784564 - 31784526
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  31784564 ggcttaattgcatttttggatccctatcttttcaaaagt 31784526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 33004709 - 33004747
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  33004709 ggcttaattgcacttttggacccctatcttttcaaaagt 33004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 39374100 - 39374138
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  39374100 ggcttaattgcacttttggccctctatcttttcaaaagt 39374138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 40493958 - 40493920
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  40493958 ggcttaattgcacttttggacccctatcttttcaaaagt 40493920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 15977521 - 15977484
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  15977521 gcttaattgcacttttggacccctatcttttcaaaagt 15977484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 21568237 - 21568200
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  21568237 gcttaattgcatttttggatccctatcttttcaaaagt 21568200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 34470026 - 34470067
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  34470026 aatggcttaattgcacttttggccccctatcttttcaaaagt 34470067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 36987729 - 36987688
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| | |||||||| |||||||    
T  36987729 aatggcttaattgcacttttggacccctatctttccaaaagt 36987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 20494337 - 20494377
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  20494337 atggcttaattgcacttttggacccctatctttttaaaagt 20494377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 24857877 - 24857921
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| || ||||||||||||||||| |||||||||| |||||||    
T  24857877 aaaaaaggtttaattgcacttttggacctctatctttccaaaagt 24857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 39431488 - 39431444
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||    
T  39431488 aaaattggcttaattgcacttttgaacctctatctttttaaaagt 39431444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 40493644 - 40493684
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  40493644 atggcttaattgcacttttggacccctatctttttaaaagt 40493684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 44245282 - 44245246
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    ||||||||||||||||||| || ||||||||||||||    
T  44245282 ggcttaattgcacttttggctccctatcttttcaaaa 44245246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 866458 - 866407
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcct 91  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  866458 tggcttaattgcacttttggatccctatctttccaaaagtgcaattaagcct 866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 6491410 - 6491454
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  6491410 aaaaaaggcttaattgcacttttggacctctatcttttcaaaagt 6491454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 12071959 - 12071920
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  12071959 tggcttaattgcacttttggatctctatctttccaaaagt 12071920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 40815180 - 40815141
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40815180 tggcttaattgcacttttggacctctatcttttcaaaagt 40815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 41585284 - 41585323
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  41585284 tggcttaattgcatttttggatctctatcttttcaaaagt 41585323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 3383964 - 3384002
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  3383964 ggcttaattgcacttttggacctctatcttttcaaaagt 3384002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 6809068 - 6809106
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  6809068 ggcttaattgcacttttggatccctatcttttcaaaagt 6809106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 8028960 - 8028998
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  8028960 ggcttaattgcacttttggatccctatcttttcaaaagt 8028998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 30288511 - 30288474
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30288511 gcttaattgcacttttggatctctatcttttaaaaagt 30288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 33777166 - 33777215
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcc 90  Q
    |||||||||||||||||||| | ||||||||  |||||||||||||||||    
T  33777166 ggcttaattgcacttttggacccctatctttctaaaagtgcaattaagcc 33777215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 29704619 - 29704655
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| ||||||||||||||||||    
T  29704619 cttaattgcacttttggacctctatcttttcaaaagt 29704655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 32341811 - 32341767
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  32341811 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 32341767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 37029243 - 37029203
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  37029243 atggcttaattgcacttttggacctctatctttccaaaagt 37029203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 39427405 - 39427449
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  39427405 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 39427449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 45680093 - 45680129
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||    
T  45680093 cttaattgcacttttggatccctatcttttcaaaagt 45680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 6183296 - 6183257
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  6183296 tggcttaattgcacttttggacccctatcttttcaaaagt 6183257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 6491730 - 6491691
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  6491730 tggcttaattgcacttttggacccctatcttttcaaaagt 6491691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 9332906 - 9332941
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9332906 ttaattgcacttttggagctctatcttttcaaaagt 9332941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 9356679 - 9356714
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9356679 ttaattgcacttttggagctctatcttttcaaaagt 9356714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 13791889 - 13791850
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  13791889 tggcttaattgcacttttggacccctatcttttcaaaagt 13791850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 18589848 - 18589887
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  18589848 tggcttaattgcacttttggacctctatctttccaaaagt 18589887  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 18590144 - 18590105
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  18590144 tggcttaattgcacttttggatccctatctttttaaaagt 18590105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 22075665 - 22075626
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  22075665 tggcttaattgcacttttggacccctatcttttcaaaagt 22075626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 28503450 - 28503411
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  28503450 tggcttaattgcacttttggacccctatcttttcaaaagt 28503411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 38622717 - 38622678
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  38622717 tggcttaattgcacttttggacccctatcttttcaaaagt 38622678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 47764090 - 47764129
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  47764090 tggcttaattgcacttttggacctctattttttcaaaagt 47764129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 52149828 - 52149789
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  52149828 tggcttaattgcacttttggacccctatcttttcaaaagt 52149789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 4243440 - 4243402
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  4243440 ggcttaattgcacttttggatccctatctttttaaaagt 4243402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 8770463 - 8770501
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  8770463 ggcttaattgcacttttggacccctatcttttcaaaagt 8770501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 11018715 - 11018677
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  11018715 ggcttaattgcacttttggacccctatcttttcaaaagt 11018677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 16491288 - 16491250
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| || |||||||||||||||    
T  16491288 ggcttaattgcacttttggacctttatcttttcaaaagt 16491250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 22204305 - 22204343
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  22204305 ggcttaattgcacttttggacccctatcttttcaaaagt 22204343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 22204619 - 22204581
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  22204619 ggcttaattgcacttttggacctctatctttccaaaagt 22204581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 23341964 - 23342002
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  23341964 ggcttaattgcacttttggacccctatcttttcaaaagt 23342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 37028928 - 37028966
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  37028928 ggcttaattgcacttttggacccctatcttttcaaaagt 37028966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 43677103 - 43677141
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  43677103 ggcttaattgcacttttggatccctatctttccaaaagt 43677141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 43914893 - 43914855
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  43914893 ggcttaattgcacttttggacccctatcttttcaaaagt 43914855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 45884948 - 45884986
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  45884948 ggcttaattgcacttttggacccctatcttttcaaaagt 45884986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 46320989 - 46320951
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  46320989 ggcttaattgcacttttggacctctatctttccaaaagt 46320951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 52143478 - 52143440
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  52143478 ggcttaattgcacttttggacccctatcttttcaaaagt 52143440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 8029269 - 8029232
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  8029269 gcttaattgcacttttggatccctatctttccaaaagt 8029232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 13098032 - 13098069
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  13098032 gcttaattgcacttttggatccctatcttttaaaaagt 13098069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 41585597 - 41585560
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  41585597 gcttaattgcacttttggacctctatctttttaaaagt 41585560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 12690015 - 12690059
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  12690015 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 12690059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 21727926 - 21727890
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  21727926 cttaattgcacttttggacccctatcttttcaaaagt 21727890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 27855561 - 27855601
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | | ||||||||||||||||    
T  27855561 atggcttaattgcacttttgaacccctatcttttcaaaagt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 28503129 - 28503173
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| ||||||||| ||||||| || ||||||||||||||||||    
T  28503129 aaaaaaggcttaattacacttttagacctctatcttttcaaaagt 28503173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 43914572 - 43914616
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  43914572 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 43914616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 47113700 - 47113664
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    |||||||||||||||||||| | ||||||||||||||    
T  47113700 ggcttaattgcacttttggacccctatcttttcaaaa 47113664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 7318950 - 7318898
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcct 91  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  7318950 atggcttaattgcacttttggacccctatctttccaaaagtgcaattaagcct 7318898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7013663 - 7013625
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7013663 ggcttaattgcacttttggatctctatcttttcaaaagt 7013625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 994993 - 995031
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  994993 ggcttaattgcacttttggatccctatcttttcaaaagt 995031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 41625460 - 41625498
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  41625460 ggcttaattgcacttttggatccctatcttttcaaaagt 41625498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 42866152 - 42866190
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  42866152 ggcttaattgcacttttagatctctatcttttcaaaagt 42866190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 4167519 - 4167475
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||    
T  4167519 aaaattggcttaattgcacttttggacccctatcttttcaaaagt 4167475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 6745313 - 6745269
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  6745313 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 6745269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 4107162 - 4107123
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  4107162 tggcttaattgcacttttggacccctatcttttcaaaagt 4107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 6641912 - 6641873
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  6641912 tggcttaattgcacttttggacccctatcttttcaaaagt 6641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 7013344 - 7013387
Alignment:
Q  36 aaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||    
T  7013344 aaaaaggcttaattgcacttttagatccctatcttttcaaaagt 7013387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 23233780 - 23233819
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  23233780 tggcttaattgcacttttggacccctatcttttcaaaagt 23233819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 30358842 - 30358881
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  30358842 tggcttaattgcacttttggacctcgatcttttcaaaagt 30358881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 33881397 - 33881362
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33881397 ttaattgcacttttggacctctatcttttcaaaagt 33881362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 45022650 - 45022595
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcc 90  Q
    ||||| || |||||||| |||||||| | |||||||| ||||||||||||||||||    
T  45022650 aaaaaaggtttaattgcccttttggacccctatctttccaaaagtgcaattaagcc 45022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 414968 - 414930
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  414968 ggcttaattgcacttttggacccctatcttttcaaaagt 414930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 2321516 - 2321554
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2321516 ggcttaattgcacttttggacccctatcttttcaaaagt 2321554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 4132754 - 4132792
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  4132754 ggcttaattgcacttttggatccctatctttccaaaagt 4132792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 6014419 - 6014457
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  6014419 ggcttaattgcacttttggacccctatcttttcaaaagt 6014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 6014731 - 6014693
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  6014731 ggcttaattgcacttttggatccctatctttttaaaagt 6014693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 6335641 - 6335603
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  6335641 ggcttaattgcacttttggacccctatcttttcaaaagt 6335603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 15187928 - 15187966
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  15187928 ggcttaattgcacttttggacccctatcttttcaaaagt 15187966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 17943358 - 17943396
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  17943358 ggcttaattgcacttttggacccctatcttttcaaaagt 17943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 20819752 - 20819790
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  20819752 ggcttaattgcacttttggaccactatcttttcaaaagt 20819790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 23234093 - 23234055
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  23234093 ggcttaattgcacttttggacccctatcttttcaaaagt 23234055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 29233818 - 29233780
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  29233818 ggcttaattgcacttttggacctctatctttttaaaagt 29233780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 31191783 - 31191745
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  31191783 ggcttaattgcacttttggacctctatctttttaaaagt 31191745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 37639507 - 37639545
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  37639507 ggcttaattgcacttttggacccctatcttttcaaaagt 37639545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 37953374 - 37953412
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  37953374 ggcttaattgcacttttggacccctatcttttcaaaagt 37953412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 42267456 - 42267494
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  42267456 ggcttaattgcacttttggacccctatcttttcaaaagt 42267494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 42866406 - 42866368
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  42866406 ggcttaattgcacttttggacccctatcttttcaaaagt 42866368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 42906372 - 42906410
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  42906372 ggcttaattgcacttttggacctctatctttccaaaagt 42906410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 45106435 - 45106473
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  45106435 ggcttaattgcacttttggacccctatcttttcaaaagt 45106473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 1985558 - 1985603
Alignment:
Q  30 gatacaaaaatggcttaattgcacttttggatctctatcttttcaa 75  Q
    |||| ||||| |||||||||| ||||||||| ||||||||||||||    
T  1985558 gatagaaaaaaggcttaattgtacttttggacctctatcttttcaa 1985603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 6335333 - 6335370
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  6335333 gcttaattgcacttttggacccctatcttttcaaaagt 6335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 5734500 - 5734460
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | |||||||| |||||||    
T  5734500 atggcttaattgcacttttggacccctatctttccaaaagt 5734460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 6655597 - 6655553
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  6655597 aaaaaaggcttaattgcatttttggatccctatctttccaaaagt 6655553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 6735999 - 6735955
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  6735999 aaaaaaggcttaattgcatttttggatccctatctttccaaaagt 6735955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 8287923 - 8287879
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||| ||||||||||||| | ||||||||||||||||    
T  8287923 aaaaaaggcttagttgcacttttggacccctatcttttcaaaagt 8287879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 18530826 - 18530870
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||| | | ||||||||||||||||    
T  18530826 aaaaaaggcttaattgcacttttgaacccctatcttttcaaaagt 18530870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 18553290 - 18553246
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| ||||||| | |||||||| |||||||    
T  18553290 aaaaatggcttaattgcaattttggacccctatctttccaaaagt 18553246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 32332134 - 32332178
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  32332134 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 32332178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 37205860 - 37205816
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  37205860 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 37205816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 45209295 - 45209251
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||||    
T  45209295 aaaaaaggcttaattgcacttttggacccctatctttttaaaagt 45209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 14904442 - 14904492
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcct 91  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  14904442 ggcttaattgcacttttggacccctatctttccaaaagtgcaattaagcct 14904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 22202802 - 22202758
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  22202802 aaaaatggtttaattgcacttttggatccctatcttttcaaaagt 22202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 38511658 - 38511697
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  38511658 tggcttaattgcacttttggatccctatcttttcaaaagt 38511697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 51842800 - 51842839
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  51842800 tggcttaattgcacttttagatctctatcttttcaaaagt 51842839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 9630768 - 9630806
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9630768 ggcttaattgcacttttggatccctatcttttcaaaagt 9630806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 14004147 - 14004109
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14004147 ggcttaattgcacttttggatccctatcttttcaaaagt 14004109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 36373858 - 36373820
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  36373858 ggcttaattgcacttttggatccctatcttttcaaaagt 36373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 45744212 - 45744174
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  45744212 ggcttaattgcacttttggatctctatctttccaaaagt 45744174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 47943459 - 47943497
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47943459 ggcttaattgcacttttggacctctatcttttcaaaagt 47943497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 49997969 - 49997931
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  49997969 ggcttaattgcacttttggacctctatcttttcaaaagt 49997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 32459102 - 32459058
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||    
T  32459102 aaaaaaggcttaattgcatttttggatctctatctttccaaaagt 32459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 33576728 - 33576684
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  33576728 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 33576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 33622177 - 33622141
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||    
T  33622177 cttaattgcacttttggatccctatcttttcaaaagt 33622141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 50033307 - 50033351
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| || |||||||||| |||||||    
T  50033307 aaaaatggcttaattgcacttttagacctctatctttccaaaagt 50033351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 2119028 - 2118989
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  2119028 tggcttaattgcacttttggacccctatcttttcaaaagt 2118989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 17483560 - 17483599
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  17483560 tggcttaattgcacttttggacccctatcttttcaaaagt 17483599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 17483872 - 17483833
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  17483872 tggcttaattgcacttttggacccctatcttttcaaaagt 17483833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 39708013 - 39708060
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagtgcaattaagcct 91  Q
    |||||||||||||| || | |||||||| |||||||||||||||||||    
T  39708013 ttaattgcacttttcgacccctatctttccaaaagtgcaattaagcct 39708060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 41282161 - 41282122
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  41282161 tggcttaattgcacttttggacccctatcttttcaaaagt 41282122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 42230028 - 42230071
Alignment:
Q  36 aaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| |||||||||||||||||||| |||||||||| |||||||    
T  42230028 aaaaaggcttaattgcacttttggacctctatctttccaaaagt 42230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 45760547 - 45760508
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  45760547 tggcttaattgcacttttggacccctatcttttcaaaagt 45760508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 51213306 - 51213345
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  51213306 tggcttaattgcacttttggacccctatcttttcaaaagt 51213345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7858275 - 7858237
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  7858275 ggcttaattgcacttttggatccctatctttccaaaagt 7858237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 9153477 - 9153515
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  9153477 ggcttaattgcacttttggacccctatcttttcaaaagt 9153515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 19914476 - 19914514
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  19914476 ggcttaattgcacttttggacccctatcttttcaaaagt 19914514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 21842024 - 21841986
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  21842024 ggcttaattgcacttttagacctctatcttttcaaaagt 21841986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 25126311 - 25126273
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  25126311 ggcttaattgcacttttggacccctatcttttcaaaagt 25126273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 26012685 - 26012723
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  26012685 ggcttaattgcacttttagatccctatcttttcaaaagt 26012723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 31117620 - 31117658
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  31117620 ggcttaattgcacttttggacccctatcttttcaaaagt 31117658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 32204848 - 32204886
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  32204848 ggcttaattgcacttttggacctctatctttccaaaagt 32204886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 32205160 - 32205122
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  32205160 ggcttaattgcacttttggacccctatcttttcaaaagt 32205122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 32508232 - 32508194
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  32508232 ggcttaattgcacttttggacctctatctttccaaaagt 32508194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 38511970 - 38511932
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  38511970 ggcttaattgcacttttggacccctatcttttcaaaagt 38511932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 39589004 - 39589058
Alignment:
Q  36 aaaatggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcc 90  Q
    |||| |||| ||||||| ||||||| | |||||||| ||||||||||||||||||    
T  39589004 aaaaaggctaaattgcatttttggacccctatctttccaaaagtgcaattaagcc 39589058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 41223513 - 41223551
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  41223513 ggcttaattgcacttttggacccctatcttttcaaaagt 41223551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 44624539 - 44624501
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  44624539 ggcttaattgcacttttggacccctatcttttcaaaagt 44624501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 47943773 - 47943735
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  47943773 ggcttaattgcacttttggacccctatcttttcaaaagt 47943735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 51214472 - 51214434
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  51214472 ggcttaattgcacttttggacctctatctttttaaaagt 51214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 52613342 - 52613380
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  52613342 ggcttaattgcacttttagatttctatcttttcaaaagt 52613380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 53531806 - 53531844
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  53531806 ggcttaattgcacttttggacccctatcttttcaaaagt 53531844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 8727910 - 8727951
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  8727910 aatgacttaattgcacttttggacccctatcttttcaaaagt 8727951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 9079797 - 9079838
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  9079797 aatgacttaattgcacttttggacccctatcttttcaaaagt 9079838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22202481 - 22202522
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| | |||||||| |||||||    
T  22202481 aatggcttaattgcacttttggacccctatctttccaaaagt 22202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 24394004 - 24393967
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  24394004 gcttaattgcacttttggattcctatcttttcaaaagt 24393967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 36441636 - 36441599
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  36441636 gcttaattgcacttttgaatccctatcttttcaaaagt 36441599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 49859763 - 49859726
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  49859763 gcttaattgtacttttggacctctatcttttcaaaagt 49859726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 52613634 - 52613597
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  52613634 gcttaattgcacttttggacccctatcttttcaaaagt 52613597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 27719997 - 27719961
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  27719997 cttaattgcacttttggacccctatcttttcaaaagt 27719961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 28097743 - 28097699
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| ||||||||| |||||||||| | ||||||||||||||||    
T  28097743 aaaaaaggcttaattccacttttggacccctatcttttcaaaagt 28097699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 32507921 - 32507965
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||| |||||||||||    
T  32507921 aaaaaaggcttaattgcacttttggacccctattttttcaaaagt 32507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 37181998 - 37182042
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  37181998 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 37182042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 39905730 - 39905766
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||| || ||||||||||||||||||    
T  39905730 cttaattgcactttttgacctctatcttttcaaaagt 39905766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 53192108 - 53192152
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  53192108 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 53192152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 33749249 - 33749298
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagtgcaattaagccta 92  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||||    
T  33749249 cttaattgcacttttggccccctatcttttcaaaagtgcaattaagccta 33749298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 39283 - 39244
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  39283 tggcttaattgcacttttggatccctatcttttcaaaagt 39244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 15221527 - 15221477
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagcct 91  Q
    |||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  15221527 ggcttaattgcacttttggacccatatctttccaaaagtgcaattaagcct 15221477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 16666073 - 16666111
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  16666073 ggcttaattgcacttttggatccctatcttttcaaaagt 16666111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 3728576 - 3728539
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3728576 gcttaattgcacttttggatctctatctttccaaaagt 3728539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 9559859 - 9559892
Alignment:
Q  46 aattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||||||||||||||    
T  9559859 aattgcacttttggatctctatcttttcaaaagt 9559892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 22773897 - 22773860
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  22773897 gcttaattgcacttttggacctctatcttttcaaaagt 22773860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 223213 - 223169
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||||||| | |||||||| |||||||    
T  223213 aaaaatggcttaattgcacttttggacccctatctttccaaaagt 223169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 4096770 - 4096726
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| || |||||||||||||||    
T  4096770 aaaaaaggcttaattgcacttttggacctttatcttttcaaaagt 4096726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 16329890 - 16329854
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16329890 cttaattgcacttttggatccctatcttttcaaaagt 16329854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 22627296 - 22627260
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22627296 ggcttaattgcacttttggatccctatcttttcaaaa 22627260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 23263139 - 23263183
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  23263139 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 23263183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 30894435 - 30894391
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||    
T  30894435 aaaaaaggcttaattgcatttttggatccctatcttttcaaaagt 30894391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 34082097 - 34082137
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  34082097 atggtttaattgcacttttggatccctatcttttcaaaagt 34082137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 34606689 - 34606645
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  34606689 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 34606645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 8339958 - 8339997
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  8339958 tggcttaattgcacttttggacccctatcttttcaaaagt 8339997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 12610588 - 12610549
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  12610588 tggcttaattgcacttttggccctctatcttttcaaaagt 12610549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 16597044 - 16597079
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  16597044 ttaattgcacttttggacctctatcttttcaaaagt 16597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 26323689 - 26323650
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  26323689 tggcttaattgcacttttggacccctatcttttcaaaagt 26323650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 34169102 - 34169063
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  34169102 tggcttaattgcacttttggacccctatcttttcaaaagt 34169063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 931847 - 931885
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  931847 ggcttaattgtacttttggatccctatcttttcaaaagt 931885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 2710650 - 2710612
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2710650 ggcttaattgcacttttggacccctatcttttcaaaagt 2710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 3020907 - 3020869
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  3020907 ggcttaattgcacttttggacccctatcttttcaaaagt 3020869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 6815742 - 6815704
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  6815742 ggcttaattgcacttttggccctctatcttttcaaaagt 6815704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 13961003 - 13960965
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  13961003 ggcttaattgtacttttggacctctatcttttcaaaagt 13960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 25631086 - 25631124
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  25631086 ggcttaattgcacttttggacccctatcttttcaaaagt 25631124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 29559774 - 29559812
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  29559774 ggcttaattgcacttttggattcctatcttttcaaaagt 29559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 31456174 - 31456136
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  31456174 ggcttaattgcacttttggacccctatcttttcaaaagt 31456136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 34082414 - 34082376
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  34082414 ggcttaattgcacttttggacccctatcttttcaaaagt 34082376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 34734386 - 34734348
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  34734386 ggcttaattgcacttttggacccctatcttttcaaaagt 34734348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 35307015 - 35306977
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  35307015 ggcttaattgcacttttggacccctatcttttcaaaagt 35306977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 40687666 - 40687704
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  40687666 ggcttaattgcacttttggacccctatcttttcaaaagt 40687704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 40687982 - 40687944
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  40687982 ggcttaattgcacttttggacccctatcttttcaaaagt 40687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 41032499 - 41032461
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  41032499 ggcttaattgcacttttggatccctatctttccaaaagt 41032461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 4125438 - 4125482
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  4125438 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 4125482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 12049113 - 12049157
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  12049113 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 12049157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 14647690 - 14647734
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||||    
T  14647690 aaaaaaggcttaattgcacttttggacccctatctttttaaaagt 14647734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 15738392 - 15738348
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| |  |||||||||||||||    
T  15738392 aaaaaaggcttaattgcacttttggacccatatcttttcaaaagt 15738348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 28736759 - 28736715
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| ||||||||||||||||| || | ||||||||||||||||    
T  28736759 aaaaaaggcttaattgcacttttagacccctatcttttcaaaagt 28736715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 31455880 - 31455920
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  31455880 atggcttaattgcacttttggacccttatcttttcaaaagt 31455920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 40767890 - 40767926
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  40767890 cttaattgcacttttggacccctatcttttcaaaagt 40767926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 21917077 - 21917124
Alignment:
Q  32 tacaaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||    
T  21917077 tacaaaaaaggcttaattgcacttttggatccctattttttcaaaagt 21917124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 3931646 - 3931684
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  3931646 ggcttaattgcacttttggacctctatcttttcaaaagt 3931684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 35121413 - 35121451
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  35121413 ggcttaattgcacttttggatccctatcttttcaaaagt 35121451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 3925787 - 3925831
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  3925787 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 3925831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10318885 - 10318929
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  10318885 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 10318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 45231520 - 45231560
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  45231520 atggcttaattgcacttttggacccctatcttttcaaaagt 45231560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 388215 - 388176
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  388215 tggcttaattgcacttttggacccctatcttttcaaaagt 388176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 10319207 - 10319168
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  10319207 tggcttaattgcacttttggacccctatcttttcaaaagt 10319168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 23910169 - 23910130
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  23910169 tggcttaattgcacttttggaccactatcttttcaaaagt 23910130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 30699338 - 30699299
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  30699338 tggcttaattgcacttttggacccctatcttttcaaaagt 30699299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 38445720 - 38445681
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  38445720 tggcttaattgcacttttggacccctatcttttcaaaagt 38445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 43408522 - 43408479
Alignment:
Q  36 aaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| |||||||||||||||||||| | ||||||||||||||||    
T  43408522 aaaaaggcttaattgcacttttggacccctatcttttcaaaagt 43408479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 930704 - 930746
Alignment:
Q  37 aaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||| |||||||||| | ||||||||||||||||    
T  930704 aaatggcttaattacacttttggacccctatcttttcaaaagt 930746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 931021 - 930983
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  931021 ggcttaattgcacttttggacccctatcttttcaaaagt 930983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 18852495 - 18852533
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  18852495 ggcttaattgcacttttggacccctatcttttcaaaagt 18852533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 19194474 - 19194436
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  19194474 ggcttaattgcacttttggacctctatctttccaaaagt 19194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 19778567 - 19778529
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  19778567 ggcttaattgcacttttggacccctatcttttcaaaagt 19778529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 21917563 - 21917525
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  21917563 ggcttaattgcacttttggacccctatcttttcaaaagt 21917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 23909895 - 23909933
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  23909895 ggcttaattgcacttttggacccctatcttttcaaaagt 23909933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 25986925 - 25986963
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  25986925 ggcttaattgcacttttggacccctatcttttcaaaagt 25986963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 26612656 - 26612618
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  26612656 ggcttaattgcacttttggacccctatcttttcaaaagt 26612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 30699023 - 30699061
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  30699023 ggcttaattgcacttttggatccctatctttccaaaagt 30699061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 34533526 - 34533488
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  34533526 ggcttaattgcacttttggacccctatcttttcaaaagt 34533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 35121726 - 35121688
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  35121726 ggcttaattgcacttttggacccctatcttttcaaaagt 35121688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 37452362 - 37452324
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  37452362 ggcttaattgcacttttggacccctatcttttcaaaagt 37452324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 38879161 - 38879199
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  38879161 ggcttaattgtacttttggacctctatcttttcaaaagt 38879199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 41445973 - 41446011
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  41445973 ggcttaattgcacttttggctccctatcttttcaaaagt 41446011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 25036345 - 25036308
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  25036345 gcttaattgcacttttggatccctatctttttaaaagt 25036308  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 42997368 - 42997327
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||| ||||||| | ||||||||||||||||    
T  42997368 aatggcttaattgcatttttggacccctatcttttcaaaagt 42997327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 228277 - 228233
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| || ||||||||||||||||| | ||||||||||||||||    
T  228277 aaaaaaggtttaattgcacttttggacccctatcttttcaaaagt 228233  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10350800 - 10350844
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||| ||||||| | ||||||||||||||||    
T  10350800 aaaaaaggcttaattgcatttttggacccctatcttttcaaaagt 10350844  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 20588466 - 20588430
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||  ||||||||||||||||||    
T  20588466 cttaattgcacttttggccctctatcttttcaaaagt 20588430  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 27513120 - 27513076
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||||| |||||    
T  27513120 aaaaaaggcttaattgcacttttggacccctatcttttcgaaagt 27513076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 37047977 - 37047941
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  37047977 cttaattgcacttttggacccctatcttttcaaaagt 37047941  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 9126688 - 9126637
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagtgcaattaagccta 92  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||| ||||    
T  9126688 ggcttaattgcacttttggacccctatctttccaaaagtgcaattaaaccta 9126637  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 18683011 - 18683050
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  18683011 tggcttaattgcacttttggacctctatcttttcaaaagt 18683050  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 5606296 - 5606334
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5606296 ggcttaattgcacttttggatccctatcttttcaaaagt 5606334  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 5606610 - 5606572
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5606610 ggcttaattgcacttttggacctctatcttttcaaaagt 5606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 28930465 - 28930502
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28930465 gcttaattgcacttttggacctctatcttttcaaaagt 28930502  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 11746294 - 11746254
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  11746294 atggcttaattgcacttttggacccctatcttttcaaaagt 11746254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 13042739 - 13042683
Alignment:
Q  23 ttatcaggatacaaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||| |||| ||| |||||||||||||||||||||| | |||||||| |||||||    
T  13042739 ttatcatgataaaaatatggcttaattgcacttttggacccctatctttccaaaagt 13042683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 17965833 - 17965877
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||    
T  17965833 aaaaaaggtttaattgcacttttggatccctatcttttcaaaagt 17965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 31740763 - 31740807
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||    
T  31740763 aaaaaaggcttaattgcacttttggacccctatcttttcaaaagt 31740807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 1814975 - 1815014
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  1814975 tggcttaattgcacttttggacccctatcttttcaaaagt 1815014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 3196026 - 3195987
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  3196026 tggcttaattgcacttttggatccttatcttttcaaaagt 3195987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 10894184 - 10894145
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  10894184 tggcttaattgcacttttggacctctatctttccaaaagt 10894145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 10977657 - 10977696
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  10977657 tggcttaattgcacttttggacccctatcttttcaaaagt 10977696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 11445979 - 11446014
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11445979 ttaattgcacttttggacctctatcttttcaaaagt 11446014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 28930778 - 28930739
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  28930778 tggcttaattgcacttttggacccctatcttttcaaaagt 28930739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 2100380 - 2100418
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  2100380 ggcttaattgcacttttggacctctatctttccaaaagt 2100418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 2100694 - 2100656
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2100694 ggcttaattgcacttttggacccctatcttttcaaaagt 2100656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 2565078 - 2565116
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2565078 ggcttaattgcacttttggacccctatcttttcaaaagt 2565116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 2565392 - 2565354
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2565392 ggcttaattgcacttttggacccctatcttttcaaaagt 2565354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7391790 - 7391752
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  7391790 ggcttaattgcacttttggacctctatctttccaaaagt 7391752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 11322338 - 11322300
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  11322338 ggcttaattgcacttttggacccctatcttttcaaaagt 11322300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 14168576 - 14168614
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  14168576 ggcttaattgcacttttggccctctatcttttcaaaagt 14168614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 30818528 - 30818490
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  30818528 ggcttaattgcacttttgaatccctatcttttcaaaagt 30818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 30965691 - 30965729
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  30965691 ggcttaattgcacttttggacccctatcttttcaaaagt 30965729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 20630665 - 20630624
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| || |||||||||| |||||||    
T  20630665 aatggcttaattgcacttttagacctctatctttccaaaagt 20630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 31833267 - 31833304
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  31833267 gcttaattgcacttttggacccctatcttttcaaaagt 31833304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 929197 - 929225
Alignment:
Q  31 atacaaaaatggcttaattgcacttttgg 59  Q
    |||||||||||||||||||||||||||||    
T  929197 atacaaaaatggcttaattgcacttttgg 929225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 3195718 - 3195754
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  3195718 cttaattgcacttttggacccctatcttttcaaaagt 3195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 6261379 - 6261419
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | |||||||| |||||||    
T  6261379 atggcttaattgcacttttggacccctatctttccaaaagt 6261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10893883 - 10893927
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  10893883 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 10893927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 3770474 - 3770435
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3770474 tggcttaattgcacttttggacctctatcttttcaaaagt 3770435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 20466384 - 20466423
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  20466384 tggcttaattgcacttttggatccctatcttttcaaaagt 20466423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 35083895 - 35083856
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35083895 tggcttaattgcacttttggacctctatcttttcaaaagt 35083856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7119907 - 7119869
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7119907 ggcttaattgcacttttggatccctatcttttcaaaagt 7119869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 29432360 - 29432322
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  29432360 ggcttaattgcacttttggatccctatcttttcaaaagt 29432322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 55586616 - 55586654
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  55586616 ggcttaattgcacttttggacctctatcttttcaaaagt 55586654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 37289768 - 37289731
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  37289768 gcttaattgcacttttggatccctatcttttcaaaagt 37289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 54216273 - 54216232
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  54216273 aatggcttaattgcacttttgaacctctatcttttcaaaagt 54216232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 26171551 - 26171515
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| ||||||||||||||||||    
T  26171551 cttaattgcacttttggacctctatcttttcaaaagt 26171515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 49869247 - 49869291
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  49869247 aaaaaaggcttaattgcacttttggctccctatcttttcaaaagt 49869291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 13019272 - 13019311
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  13019272 tggcttaattgcacttttggacccctatcttttcaaaagt 13019311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 28158899 - 28158934
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28158899 ttaattgcacttttggatccctatcttttcaaaagt 28158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 34158783 - 34158748
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34158783 ttaattgcacttttggatccctatcttttcaaaagt 34158748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 34363132 - 34363093
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  34363132 tggcttaattgcacttttggacccctatcttttcaaaagt 34363093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 48278230 - 48278191
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  48278230 tggcttaattgcacttttggacctctatctttccaaaagt 48278191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 233004 - 232966
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  233004 ggcttaattgcacttttggacccctatcttttcaaaagt 232966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 5344270 - 5344308
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  5344270 ggcttaattgcacttttggacccctatcttttcaaaagt 5344308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 7644457 - 7644495
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  7644457 ggcttaattgcacttttggacccctatcttttcaaaagt 7644495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 7705902 - 7705864
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  7705902 ggcttaattgcacttttggatccctatctttccaaaagt 7705864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 8483173 - 8483135
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  8483173 ggcttaattgcacttttggacctctattttttcaaaagt 8483135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 10046249 - 10046211
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  10046249 ggcttaattgcacttttggacccctatcttttcaaaagt 10046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 11530073 - 11530035
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  11530073 ggcttaattgcacttttggacccctatcttttcaaaagt 11530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 12640820 - 12640858
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  12640820 ggcttaattgcacttttggacccctatcttttcaaaagt 12640858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 14578753 - 14578715
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  14578753 ggcttaattgcacttttggacccctatcttttcaaaagt 14578715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 17554359 - 17554321
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  17554359 ggcttaattgcacttttggacccctatcttttcaaaagt 17554321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 18988179 - 18988217
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  18988179 ggcttaattgcacttttggacccctatcttttcaaaagt 18988217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 21537190 - 21537152
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  21537190 ggcttaattgcacttttggacccctatcttttcaaaagt 21537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 24542754 - 24542792
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  24542754 ggcttaattgcacttttggacccctatcttttcaaaagt 24542792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 31250782 - 31250744
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  31250782 ggcttaattgcacttttggacccctatcttttcaaaagt 31250744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 34362820 - 34362858
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  34362820 ggcttaattgcacttttggacccctatcttttcaaaagt 34362858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 34957378 - 34957415
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  34957378 ggcttaattgcacttttggatc-ctatcttttcaaaagt 34957415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 38371271 - 38371309
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  38371271 ggcttaattgcacttttggacccctatcttttcaaaagt 38371309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 39136298 - 39136336
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  39136298 ggcttaattgcacttttggacccctatcttttcaaaagt 39136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 44921923 - 44921885
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  44921923 ggcttaattgcacttttggacccctatcttttcaaaagt 44921885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 45289813 - 45289775
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  45289813 ggcttaattgcacttttggacccctatcttttcaaaagt 45289775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 47853976 - 47854014
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  47853976 ggcttaattgcacttttggacccctatcttttcaaaagt 47854014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 52114447 - 52114409
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  52114447 ggcttaattgcacttttggatccctatctttccaaaagt 52114409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 1187004 - 1186963
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  1187004 aatggcttaattgcacttttggccccctatcttttcaaaagt 1186963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 9592447 - 9592406
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  9592447 aatggcttaattgcacttttggccccctatcttttcaaaagt 9592406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 11159736 - 11159695
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| | |||||||| |||||||    
T  11159736 aatggcttaattgcacttttggacccctatctttccaaaagt 11159695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 21536877 - 21536918
Alignment:
Q  38 aatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||||| | |||||||| |||||||    
T  21536877 aatggcttaattgcacttttggacccctatctttccaaaagt 21536918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 22159830 - 22159867
Alignment:
Q  42 gcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  22159830 gcttaattgcacttttggacccctatcttttcaaaagt 22159867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 51696525 - 51696574
Alignment:
Q  30 gatacaaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||| |||||||||||||||||||| | |||||||| |||||||    
T  51696525 gataaaaaaaaggcttaattgcacttttggacccctatctttccaaaagt 51696574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 7666194 - 7666238
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  7666194 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 7666238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 18988495 - 18988455
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | ||||||||| ||||||    
T  18988495 atggcttaattgcacttttggacccctatctttttaaaagt 18988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 24543058 - 24543018
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||| ||||||||||||||||| | ||||||||||||||||    
T  24543058 atggtttaattgcacttttggacccctatcttttcaaaagt 24543018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 35835776 - 35835812
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35835776 ggcttaattgcacttttggacccctatcttttcaaaa 35835812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 37432529 - 37432493
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  37432529 cttaattgcacttttggacccctatcttttcaaaagt 37432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 38371577 - 38371541
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  38371577 ggcttaatcgcacttttggacctctatcttttcaaaa 38371541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 41707720 - 41707756
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  41707720 cttaattgcacttttggacccctatcttttcaaaagt 41707756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 50513353 - 50513317
Alignment:
Q  43 cttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||| | ||||||||||||||||    
T  50513353 cttaattgcacttttggacccctatcttttcaaaagt 50513317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 1355 - 1393
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  1355 ggcttaattgcacttttggatccctatcttttcaaaagt 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 20868 - 20906
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20868 ggcttaattgcacttttggacctctatcttttcaaaagt 20906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 10549 - 10597
Alignment:
Q  31 atacaaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| ||| |||||||||||||||||||| | |||||||||| |||||    
T  10549 atacataaaaggcttaattgcacttttggacccctatcttttccaaagt 10597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 23162 - 23123
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  23162 tggcttaattgcacttttggtcctctatcttttcaaaagt 23123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 12050 - 12085
Alignment:
Q  44 ttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12050 ttaattgcacttttggacctctatcttttcaaaagt 12085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 20595 - 20633
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  20595 ggcttaattgcacttttggacccctatcttttcaaaagt 20633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 79300 - 79262
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  79300 ggcttaattgcacttttggacccctatcttttcaaaagt 79262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 238622 - 238660
Alignment:
Q  41 ggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  238622 ggcttaattgcacttttggacccctatcttttcaaaagt 238660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 21065 - 21102
Alignment:
Q  40 tggcttaattgcacttttggatctctatcttttcaaaa 77  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  21065 tggcttaattgcacttttggatccctatctttccaaaa 21102  T

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Target: scaffold0594 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 5912 - 5868
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  5912 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 5868  T

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Target: scaffold0474 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 7715 - 7759
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  7715 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 7759  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 16069 - 16029
Alignment:
Q  39 atggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    |||||||||||||||||||||| | |||||||| |||||||    
T  16069 atggcttaattgcacttttggacccctatctttccaaaagt 16029  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 139169 - 139213
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| || ||||||||||||||||||| |||||||| |||||||    
T  139169 aaaaaaggtttaattgcacttttggatccctatctttccaaaagt 139213  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 401025 - 400981
Alignment:
Q  35 aaaaatggcttaattgcacttttggatctctatcttttcaaaagt 79  Q
    ||||| |||||||||||||||||||| | |||||||| |||||||    
T  401025 aaaaaaggcttaattgcacttttggacccctatctttccaaaagt 400981  T

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