View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5054_high_7 (Length: 294)

Name: NF5054_high_7
Description: NF5054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5054_high_7
NF5054_high_7
[»] chr8 (35 HSPs)
chr8 (19-248)||(898859-899088)
chr8 (62-240)||(5791890-5792066)
chr8 (260-294)||(2442855-2442889)
chr8 (260-294)||(4312228-4312262)
chr8 (260-294)||(4430734-4430768)
chr8 (260-294)||(4977033-4977067)
chr8 (260-294)||(6317395-6317429)
chr8 (260-294)||(6844984-6845018)
chr8 (260-294)||(10096707-10096741)
chr8 (260-294)||(14243794-14243828)
chr8 (260-294)||(16501742-16501776)
chr8 (260-294)||(23681105-23681139)
chr8 (260-294)||(24655069-24655103)
chr8 (260-294)||(25063435-25063469)
chr8 (260-294)||(26675652-26675686)
chr8 (260-294)||(26690789-26690823)
chr8 (260-294)||(27544915-27544949)
chr8 (260-294)||(27817448-27817482)
chr8 (260-294)||(27849742-27849776)
chr8 (260-294)||(34540063-34540097)
chr8 (260-294)||(34711554-34711588)
chr8 (260-294)||(35421618-35421652)
chr8 (260-294)||(35497635-35497669)
chr8 (260-294)||(38953479-38953513)
chr8 (260-294)||(40772564-40772598)
chr8 (261-294)||(25199141-25199174)
chr8 (261-294)||(25893946-25893979)
chr8 (261-294)||(34744266-34744299)
chr8 (261-294)||(43129191-43129224)
chr8 (260-292)||(6436780-6436812)
chr8 (71-123)||(7593628-7593680)
chr8 (262-294)||(27928253-27928285)
chr8 (262-294)||(29158898-29158930)
chr8 (262-294)||(38070482-38070514)
chr8 (260-292)||(39443096-39443128)
[»] chr3 (46 HSPs)
chr3 (61-231)||(21430828-21430998)
chr3 (260-294)||(1242312-1242346)
chr3 (260-294)||(2096582-2096616)
chr3 (260-294)||(2666307-2666341)
chr3 (260-294)||(3440821-3440855)
chr3 (260-294)||(3917861-3917895)
chr3 (260-294)||(4232176-4232210)
chr3 (260-294)||(4976707-4976741)
chr3 (260-294)||(5998781-5998815)
chr3 (260-294)||(8128289-8128323)
chr3 (260-294)||(8381174-8381208)
chr3 (260-294)||(8508027-8508061)
chr3 (260-294)||(9583422-9583456)
chr3 (260-294)||(10229052-10229086)
chr3 (260-294)||(11029759-11029793)
chr3 (260-294)||(13525264-13525298)
chr3 (260-294)||(15003723-15003757)
chr3 (260-294)||(19163729-19163763)
chr3 (260-294)||(22371544-22371578)
chr3 (260-294)||(24910287-24910321)
chr3 (260-294)||(28170978-28171012)
chr3 (260-294)||(29212062-29212096)
chr3 (260-294)||(32960977-32961011)
chr3 (260-294)||(34397775-34397809)
chr3 (260-294)||(38127841-38127875)
chr3 (260-294)||(38485958-38485992)
chr3 (260-294)||(41464761-41464795)
chr3 (260-294)||(47410751-47410785)
chr3 (260-294)||(48555931-48555965)
chr3 (260-294)||(51112465-51112499)
chr3 (261-294)||(13777567-13777600)
chr3 (261-294)||(30703186-30703219)
chr3 (262-294)||(7552690-7552722)
chr3 (262-294)||(10071517-10071549)
chr3 (262-294)||(11076500-11076532)
chr3 (260-292)||(14868854-14868886)
chr3 (260-292)||(16737985-16738017)
chr3 (262-294)||(17501022-17501054)
chr3 (262-294)||(18271671-18271703)
chr3 (260-292)||(24650545-24650577)
chr3 (260-292)||(26764463-26764495)
chr3 (260-292)||(28266624-28266656)
chr3 (262-294)||(34481793-34481825)
chr3 (262-294)||(37312623-37312655)
chr3 (260-292)||(43605574-43605606)
chr3 (262-294)||(54097442-54097474)
[»] chr7 (31 HSPs)
chr7 (75-161)||(27950162-27950248)
chr7 (75-161)||(28000435-28000521)
chr7 (260-294)||(990310-990344)
chr7 (260-294)||(1869911-1869945)
chr7 (260-294)||(2354794-2354828)
chr7 (260-294)||(3497516-3497550)
chr7 (260-294)||(3861335-3861369)
chr7 (260-294)||(4674308-4674342)
chr7 (260-294)||(4887512-4887546)
chr7 (260-294)||(12014731-12014765)
chr7 (260-294)||(16816786-16816820)
chr7 (260-294)||(23789414-23789448)
chr7 (260-294)||(28382673-28382707)
chr7 (260-294)||(31717392-31717426)
chr7 (260-294)||(34708767-34708801)
chr7 (260-294)||(35157083-35157117)
chr7 (260-294)||(35849390-35849424)
chr7 (260-294)||(40011988-40012022)
chr7 (260-294)||(43723407-43723441)
chr7 (260-294)||(45237025-45237059)
chr7 (260-294)||(48612612-48612646)
chr7 (261-294)||(8856370-8856403)
chr7 (261-294)||(35376860-35376893)
chr7 (261-294)||(38678163-38678196)
chr7 (261-294)||(40013359-40013392)
chr7 (262-294)||(4227429-4227461)
chr7 (262-294)||(8946523-8946555)
chr7 (262-294)||(10061017-10061049)
chr7 (262-294)||(40656109-40656141)
chr7 (262-294)||(42653166-42653198)
chr7 (262-294)||(46275045-46275077)
[»] scaffold0402 (1 HSPs)
scaffold0402 (260-294)||(1240-1274)
[»] scaffold0287 (1 HSPs)
scaffold0287 (260-294)||(1057-1091)
[»] chr6 (24 HSPs)
chr6 (260-294)||(735538-735572)
chr6 (260-294)||(1855101-1855135)
chr6 (260-294)||(4129040-4129074)
chr6 (260-294)||(4480569-4480603)
chr6 (260-294)||(7098901-7098935)
chr6 (260-294)||(8448141-8448175)
chr6 (260-294)||(8456945-8456979)
chr6 (260-294)||(10181140-10181174)
chr6 (260-294)||(10330900-10330934)
chr6 (260-294)||(12795018-12795052)
chr6 (260-294)||(18861766-18861800)
chr6 (260-294)||(31444291-31444325)
chr6 (260-294)||(32107834-32107868)
chr6 (261-294)||(2959088-2959121)
chr6 (261-294)||(4083682-4083715)
chr6 (261-294)||(8329558-8329591)
chr6 (261-294)||(9062976-9063009)
chr6 (261-294)||(23383056-23383089)
chr6 (260-292)||(1686232-1686264)
chr6 (262-294)||(5660494-5660526)
chr6 (262-294)||(8939721-8939753)
chr6 (260-292)||(16496650-16496682)
chr6 (260-292)||(21513171-21513203)
chr6 (262-294)||(31205184-31205216)
[»] chr5 (43 HSPs)
chr5 (260-294)||(4165054-4165088)
chr5 (260-294)||(4874244-4874278)
chr5 (260-294)||(6219190-6219224)
chr5 (260-294)||(9640533-9640567)
chr5 (260-294)||(11968871-11968905)
chr5 (260-294)||(12878119-12878153)
chr5 (260-294)||(16496695-16496729)
chr5 (260-294)||(18625614-18625648)
chr5 (260-294)||(23074643-23074677)
chr5 (260-294)||(23311172-23311206)
chr5 (260-294)||(25328303-25328337)
chr5 (260-294)||(26266998-26267032)
chr5 (260-294)||(26802429-26802463)
chr5 (260-294)||(26809979-26810013)
chr5 (260-294)||(26825006-26825040)
chr5 (260-294)||(27389926-27389960)
chr5 (260-294)||(29119701-29119735)
chr5 (260-294)||(34856676-34856710)
chr5 (260-294)||(34930320-34930354)
chr5 (260-294)||(36569374-36569408)
chr5 (260-294)||(36790314-36790348)
chr5 (260-294)||(36854157-36854191)
chr5 (260-294)||(37191339-37191373)
chr5 (260-294)||(39528025-39528059)
chr5 (260-294)||(41071157-41071191)
chr5 (260-294)||(42448306-42448340)
chr5 (261-294)||(1833319-1833352)
chr5 (261-294)||(6029707-6029740)
chr5 (261-294)||(20695483-20695516)
chr5 (261-294)||(24443867-24443900)
chr5 (261-294)||(38683023-38683056)
chr5 (261-294)||(40044916-40044949)
chr5 (261-294)||(40318785-40318818)
chr5 (261-294)||(41958029-41958062)
chr5 (262-294)||(4228950-4228982)
chr5 (260-292)||(12665192-12665224)
chr5 (260-292)||(14808932-14808964)
chr5 (260-292)||(17869123-17869155)
chr5 (262-294)||(18115188-18115220)
chr5 (260-292)||(21728759-21728791)
chr5 (260-292)||(23310495-23310527)
chr5 (262-294)||(24652315-24652347)
chr5 (262-294)||(29806662-29806694)
[»] chr4 (43 HSPs)
chr4 (260-294)||(5333205-5333239)
chr4 (260-294)||(6487941-6487975)
chr4 (260-294)||(7512862-7512896)
chr4 (260-294)||(12821258-12821292)
chr4 (260-294)||(13389115-13389149)
chr4 (260-294)||(16476936-16476970)
chr4 (260-294)||(18813465-18813499)
chr4 (260-294)||(21378381-21378415)
chr4 (260-294)||(25003827-25003861)
chr4 (260-294)||(29428150-29428184)
chr4 (260-294)||(30044583-30044617)
chr4 (260-294)||(31263500-31263534)
chr4 (260-294)||(33416579-33416613)
chr4 (260-294)||(36526140-36526174)
chr4 (260-294)||(36860848-36860882)
chr4 (260-294)||(37050796-37050830)
chr4 (260-294)||(37166233-37166267)
chr4 (260-294)||(42856658-42856692)
chr4 (260-294)||(46488116-46488150)
chr4 (260-294)||(49882708-49882742)
chr4 (261-294)||(1982656-1982689)
chr4 (261-294)||(23974642-23974675)
chr4 (261-294)||(24712183-24712216)
chr4 (261-294)||(36608095-36608128)
chr4 (261-294)||(50779791-50779824)
chr4 (262-294)||(579243-579275)
chr4 (262-294)||(1083603-1083635)
chr4 (260-292)||(3848816-3848848)
chr4 (262-294)||(4379400-4379432)
chr4 (262-294)||(9569570-9569602)
chr4 (262-294)||(9747266-9747298)
chr4 (262-294)||(13632185-13632217)
chr4 (262-294)||(24550908-24550940)
chr4 (262-294)||(25698939-25698971)
chr4 (260-292)||(26872209-26872241)
chr4 (262-294)||(31583604-31583636)
chr4 (262-294)||(34567122-34567154)
chr4 (260-292)||(34660789-34660821)
chr4 (262-294)||(34684297-34684329)
chr4 (260-292)||(35828373-35828405)
chr4 (262-294)||(42411989-42412021)
chr4 (262-294)||(42550423-42550455)
chr4 (262-294)||(48628465-48628497)
[»] chr2 (29 HSPs)
chr2 (260-294)||(4014812-4014846)
chr2 (260-294)||(6731637-6731671)
chr2 (260-294)||(11061477-11061511)
chr2 (260-294)||(11543798-11543832)
chr2 (260-294)||(15920613-15920647)
chr2 (260-294)||(20251484-20251518)
chr2 (260-294)||(23458775-23458809)
chr2 (260-294)||(24381340-24381374)
chr2 (260-294)||(33607138-33607172)
chr2 (260-294)||(34481670-34481704)
chr2 (260-294)||(34667139-34667173)
chr2 (260-294)||(35476489-35476523)
chr2 (260-294)||(36216752-36216786)
chr2 (260-294)||(36754740-36754774)
chr2 (260-294)||(36755043-36755077)
chr2 (260-294)||(36794899-36794933)
chr2 (260-294)||(40812112-40812146)
chr2 (260-294)||(44276358-44276392)
chr2 (260-294)||(44948114-44948148)
chr2 (260-294)||(45049480-45049514)
chr2 (261-294)||(9160925-9160958)
chr2 (261-294)||(13267975-13268008)
chr2 (261-294)||(39070114-39070147)
chr2 (262-294)||(727290-727322)
chr2 (71-123)||(2624711-2624763)
chr2 (260-292)||(12236218-12236250)
chr2 (260-292)||(18778822-18778854)
chr2 (260-292)||(28855413-28855445)
chr2 (260-292)||(32023350-32023382)
[»] chr1 (27 HSPs)
chr1 (260-294)||(270322-270356)
chr1 (260-294)||(301011-301045)
chr1 (260-294)||(5790163-5790197)
chr1 (260-294)||(18089768-18089802)
chr1 (260-294)||(18475201-18475235)
chr1 (260-294)||(19338177-19338211)
chr1 (260-294)||(20164072-20164106)
chr1 (260-294)||(25820949-25820983)
chr1 (260-294)||(27234970-27235004)
chr1 (260-294)||(33845603-33845637)
chr1 (260-294)||(33948341-33948375)
chr1 (260-294)||(39606500-39606534)
chr1 (260-294)||(40958573-40958607)
chr1 (260-294)||(43025986-43026020)
chr1 (260-294)||(43500142-43500176)
chr1 (260-294)||(43676023-43676057)
chr1 (260-294)||(48392051-48392085)
chr1 (260-294)||(50248124-50248158)
chr1 (261-294)||(8291752-8291785)
chr1 (261-294)||(12282709-12282742)
chr1 (261-294)||(18216566-18216599)
chr1 (260-292)||(10635587-10635619)
chr1 (260-292)||(13555722-13555754)
chr1 (262-294)||(29803174-29803206)
chr1 (262-294)||(36018973-36019005)
chr1 (262-294)||(40685624-40685656)
chr1 (262-294)||(45191561-45191593)
[»] scaffold0013 (1 HSPs)
scaffold0013 (261-294)||(90664-90697)
[»] scaffold0778 (1 HSPs)
scaffold0778 (260-292)||(916-948)
[»] scaffold0687 (1 HSPs)
scaffold0687 (71-123)||(2976-3028)
[»] scaffold0669 (1 HSPs)
scaffold0669 (260-292)||(7530-7562)
[»] scaffold0595 (1 HSPs)
scaffold0595 (262-294)||(440-472)
[»] scaffold0515 (1 HSPs)
scaffold0515 (262-294)||(2573-2605)
[»] scaffold0306 (1 HSPs)
scaffold0306 (262-294)||(2573-2605)
[»] scaffold0244 (1 HSPs)
scaffold0244 (262-294)||(7758-7790)
[»] scaffold0024 (1 HSPs)
scaffold0024 (260-292)||(160546-160578)


Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 898859 - 899088
Alignment:
Q  19 gaataaagacgaaggagagttgatacattatgagtaagcgttagataaaatcttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  898859 gaataaagacgaaggagagttgatacattatgagtaagcgttagataaaatcttgaaatcaatttcaaacagaacaatatgcattccatttgaaatgatc 898958  T
Q  119 actttcagagcttccagtaagcctaaagttccagcttttagaatgatgacagaggaaggagaataatctgatttttccaacaaaaattgacttgtagagt 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  898959 actttcagagcttccagtaagcctagagttccagcttttagaatgatgaaagaggaaggagaataatctgatttttccaacaaaaattgacctgtagagt 899058  T
Q  219 ctcgaaaacacatttcgtaccctataatag 248  Q
    ||||||||||||||||||||||||||||||    
T  899059 ctcgaaaacacatttcgtaccctataatag 899088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 5792066 - 5791890
Alignment:
Q  62 gataaaatcttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatcactttcagagcttccagtaagcctaaagttccagcttttagaa 161  Q
    |||||||||||| ||||  ||||||| |  |||| |||||||||||| |||||   |||||| |||||||||| | ||| || |||||||||||| | ||    
T  5792066 gataaaatcttggaatctgtttcaaatagcacaaaatgcattccattcgaaattgccactttgagagcttccaatgagcttagagttccagctttcataa 5791967  T
Q  162 tgatgacagaggaaggagaataatctgatttttccaacaaaaattgacttgtagagtctcgaaaacacatttcgtaccc 240  Q
    || ||||| || || ||||||||||||||||  ||||||||||||||  |  |||||||||||||||||| ||||||||    
T  5791966 tggtgacatagaaacgagaataatctgatttgcccaacaaaaattga--tccagagtctcgaaaacacatatcgtaccc 5791890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 2442889 - 2442855
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  2442889 ggtagatagacgaaatggcaaagccattataaact 2442855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 4312262 - 4312228
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4312262 ggtagatagacgaaatggcaaagccattataaact 4312228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4430734 - 4430768
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4430734 ggtagatagacgaaatggcaaagccattataaact 4430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4977033 - 4977067
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4977033 ggtagatagacgaaatggcaaagccattataaact 4977067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 6317429 - 6317395
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  6317429 ggtagatagacgaaatggcaaagccattataaact 6317395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 6844984 - 6845018
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  6844984 ggtagatagacgaaatggcaaagccattataaact 6845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 10096741 - 10096707
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  10096741 ggtagatagacgaaatggcaaagccattataaact 10096707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 14243828 - 14243794
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  14243828 ggtagatagacgaaatggcaaagccattataaact 14243794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 16501776 - 16501742
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  16501776 ggtagatagacgaaatggcaaagccattataaact 16501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 23681139 - 23681105
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  23681139 ggtagatagacgaaatggcaaagccattataaact 23681105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 24655103 - 24655069
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  24655103 ggtagatagacgaaatggcaaagccattataaact 24655069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 25063469 - 25063435
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  25063469 ggtagatagacgaaatggcaaagccattataaact 25063435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 26675686 - 26675652
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26675686 ggtagatagacgaaatggcaaagccattataaact 26675652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 26690823 - 26690789
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26690823 ggtagatagacgaaatggcaaagccattataaact 26690789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 27544915 - 27544949
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  27544915 ggtagatagacgaaatggcaaagccattataaact 27544949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 27817448 - 27817482
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  27817448 ggtagatagacgaaatggcaaagccattataaact 27817482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 27849742 - 27849776
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  27849742 ggtagatagacgaaatggcaaagccattataaact 27849776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 34540063 - 34540097
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34540063 ggtagatagacgaaatggcaaagccattataaact 34540097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 34711554 - 34711588
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34711554 ggtagatagacgaaatggcaaagccattataaact 34711588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 35421618 - 35421652
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  35421618 ggtagatagacgaaatggcaaagccattataaact 35421652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 35497635 - 35497669
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  35497635 ggtagatagacaaaatggcaaagccattataaact 35497669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 38953479 - 38953513
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  38953479 ggtagatagacgaaatggcaaagccattataaact 38953513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 40772564 - 40772598
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  40772564 ggtagatagacgaaatggcaaagccattataaact 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 25199174 - 25199141
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  25199174 gtagatagacgaaatggcaaagccattataaact 25199141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 25893979 - 25893946
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  25893979 gtagatagacgaaatggcaaagccattataaact 25893946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 34744266 - 34744299
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  34744266 gtagatagacaaaatggcaaagccattataaact 34744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 43129224 - 43129191
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  43129224 gtagatagacgaaatggcaaagccattataaact 43129191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 6436812 - 6436780
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  6436812 ggtagatagacgaaatggcaaagccattataaa 6436780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 7593628 - 7593680
Alignment:
Q  71 ttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatcacttt 123  Q
    |||||||||||||||||||  |||  ||||||||||||||||||  |||||||    
T  7593628 ttgaaatcaatttcaaacacgacatcatgcattccatttgaaatagtcacttt 7593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 27928285 - 27928253
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  27928285 tagatagacgaaatggcaaagccattataaact 27928253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 29158930 - 29158898
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  29158930 tagatagacgaaatggcaaagccattataaact 29158898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 38070482 - 38070514
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  38070482 tagatagacgaaatggcaaagccattataaact 38070514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 39443096 - 39443128
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  39443096 ggtagatagacgaaatggcaaagccattataaa 39443128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 21430828 - 21430998
Alignment:
Q  61 agataaaatcttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatcactttcagagcttccagtaagcctaaagttccagcttttaga 160  Q
    ||||||||||||| ||||  ||||||||||| ||  |||||||||||| |||||   |||||| | |||||||| ||||| |  |||| ||||||  | |    
T  21430828 agataaaatcttggaatctgtttcaaacaaaccagaatgcattccattcgaaattgccactttgatagcttccaataagcttggagtttcagcttccata 21430927  T
Q  161 atgatgacagaggaaggagaataatctgatttttccaacaaaaattgacttgtagagtctcgaaaacacat 231  Q
    ||| || |||||||||||||||||||| ||||  |||||||||||||||   |||||||||||||||||||    
T  21430928 atggtggcagaggaaggagaataatcttatttgcccaacaaaaattgacccatagagtctcgaaaacacat 21430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 1242346 - 1242312
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  1242346 ggtagatagacgaaatggcaaagccattataaact 1242312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 2096582 - 2096616
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  2096582 ggtagatagacgaaatggcaaagccattataaact 2096616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 2666341 - 2666307
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  2666341 ggtagatagacgaaatggcaaagccattataaact 2666307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 3440855 - 3440821
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  3440855 ggtagatagacgaaatggcaaagccattataaact 3440821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 3917895 - 3917861
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  3917895 ggtagatagacgaaatggcaaagccattataaact 3917861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4232176 - 4232210
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4232176 ggtagatagacgaaatggcaaagccattataaact 4232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4976707 - 4976741
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4976707 ggtagatagacgaaatggcaaagccattataaact 4976741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 5998781 - 5998815
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  5998781 ggtagatagacgaaatggcaaagccattataaact 5998815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 8128289 - 8128323
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  8128289 ggtagatagacgaaatggcaaagccattataaact 8128323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 8381208 - 8381174
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  8381208 ggtagatagacgaaatggcaaagccattataaact 8381174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 8508061 - 8508027
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  8508061 ggtagatagacgaaatggcaaagccattataaact 8508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 9583422 - 9583456
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  9583422 ggtagatagacgaaatggcaaagccattataaact 9583456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 10229086 - 10229052
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  10229086 ggtagatagacgaaatggcaaagccattataaact 10229052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 11029793 - 11029759
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  11029793 ggtagatagacgaaatggcaaagccattataaact 11029759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 13525298 - 13525264
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  13525298 ggtagatagacgaaatggcaaagccattataaact 13525264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 15003757 - 15003723
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  15003757 ggtagatagacgaaatggcaaagccattataaact 15003723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 19163763 - 19163729
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  19163763 ggtagatagacgaaatggcaaagccattataaact 19163729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 22371578 - 22371544
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  22371578 ggtagatagacgaaatggcaaagccattataaact 22371544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 24910287 - 24910321
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  24910287 ggtagatagacgaaatggcaaagccattataaact 24910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 28170978 - 28171012
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  28170978 ggtagatagacgaaatggcaaagccattataaact 28171012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 29212062 - 29212096
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  29212062 ggtagatagacgaaatggcaaagccattataaact 29212096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 32960977 - 32961011
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  32960977 ggtagatagacgaaatggcaaagccattataaact 32961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 34397809 - 34397775
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34397809 ggtagatagacgaaatggcaaagccattataaact 34397775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 38127841 - 38127875
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  38127841 ggtagatagacgaaatggcaaagccattataaact 38127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 38485958 - 38485992
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  38485958 ggtagatagacgaaatggcaaagccattataaact 38485992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 41464795 - 41464761
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  41464795 ggtagatagacgaaatggcaaagccattataaact 41464761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 47410751 - 47410785
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  47410751 ggtagatagacgaaatggcaaagccattataaact 47410785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 48555965 - 48555931
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  48555965 ggtagatagacgaaatggcaaagccattataaact 48555931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 51112465 - 51112499
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  51112465 ggtagatagacgaaatggcaaagccattataaact 51112499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 13777600 - 13777567
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  13777600 gtagatagacgaaatggcaaagccattataaact 13777567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 30703219 - 30703186
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  30703219 gtagatagacgaaatggcaaagccattataaact 30703186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 7552722 - 7552690
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  7552722 tagatagacgaaatggcaaagccattataaact 7552690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 10071517 - 10071549
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  10071517 tagatagacgaaatggcaaagccattataaact 10071549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 11076532 - 11076500
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  11076532 tagatagacgaaatggcaaagccattataaact 11076500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 14868854 - 14868886
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  14868854 ggtagatagacgaaatggcaaagccattataaa 14868886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 16737985 - 16738017
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  16737985 ggtagatagacgaaatggcaaagccattataaa 16738017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 17501054 - 17501022
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  17501054 tagatagacgaaatggcaaagccattataaact 17501022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 18271703 - 18271671
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||||||||||||| |||||||||||    
T  18271703 tagatagactaaatggcaaagtcattataaact 18271671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 24650545 - 24650577
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  24650545 ggtagatagacgaaatggcaaagccattataaa 24650577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 26764463 - 26764495
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  26764463 ggtagatagacgaaatggcaaagccattataaa 26764495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 28266656 - 28266624
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  28266656 ggtagatagacgaaatggcaaagccattataaa 28266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 34481793 - 34481825
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  34481793 tagatagacgaaatggcaaagccattataaact 34481825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 37312655 - 37312623
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  37312655 tagatagacgaaatggcaaagccattataaact 37312623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 43605574 - 43605606
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  43605574 ggtagatagacgaaatggcaaagccattataaa 43605606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 54097442 - 54097474
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  54097442 tagatagacgaaatggcaaagccattataaact 54097474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 27950162 - 27950248
Alignment:
Q  75 aatcaatttcaaacaaaacaatatgcattccatttgaaatgatcactttcagagcttccagtaagcctaaagttccagcttttagaa 161  Q
    ||||| ||||||||||||||| ||||||| ||||||| |||| | |||| | || ||||||||||||||||||||| |||| |||||    
T  27950162 aatcattttcaaacaaaacaacatgcatttcatttgatatgaccgctttgatagtttccagtaagcctaaagttccggcttctagaa 27950248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 28000435 - 28000521
Alignment:
Q  75 aatcaatttcaaacaaaacaatatgcattccatttgaaatgatcactttcagagcttccagtaagcctaaagttccagcttttagaa 161  Q
    ||||| ||||||||||||||| ||||||||||||||| |||| |||||| | || || |||||||||||||||| | |||| |||||    
T  28000435 aatcagtttcaaacaaaacaacatgcattccatttgatatgaccactttaaaagttttcagtaagcctaaagtttcggcttctagaa 28000521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 990344 - 990310
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||| |||||||||||||||||||||||||||    
T  990344 ggtagatggactaaatggcaaagccattataaact 990310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 1869945 - 1869911
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  1869945 ggtagatagacgaaatggcaaagccattataaact 1869911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 2354794 - 2354828
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  2354794 ggtagatagacgaaatggcaaagccattataaact 2354828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 3497516 - 3497550
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  3497516 ggtagatagacgaaatggcaaagccattataaact 3497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 3861335 - 3861369
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  3861335 ggtagatagacgaaatggcaaagccattataaact 3861369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4674308 - 4674342
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4674308 ggtagatagacgaaatggcaaagccattataaact 4674342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4887512 - 4887546
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4887512 ggtagatagacgaaatggcaaagccattataaact 4887546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 12014731 - 12014765
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  12014731 ggtagatagacgaaatggcaaagccattataaact 12014765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 16816820 - 16816786
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  16816820 ggtagatagacgaaatggcaaagccattataaact 16816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 23789414 - 23789448
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  23789414 ggtagatagacgaaatggcaaagccattataaact 23789448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 28382707 - 28382673
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  28382707 ggtagatagacgaaatggcaaagccattataaact 28382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 31717426 - 31717392
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  31717426 ggtagatagacgaaatggcaaagccattataaact 31717392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 34708801 - 34708767
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34708801 ggtagatagacgaaatggcaaagccattataaact 34708767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 35157083 - 35157117
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  35157083 ggtagatagacgaaatggcaaagccattataaact 35157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 35849424 - 35849390
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  35849424 ggtagatagacgaaatggcaaagccattataaact 35849390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 40011988 - 40012022
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  40011988 ggtagatagacgaaatggcaaagccattataaact 40012022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 43723441 - 43723407
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  43723441 ggtagatagacgaaatggcaaagccattataaact 43723407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 45237059 - 45237025
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  45237059 ggtagatagacgaaatggcaaagccattataaact 45237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 48612646 - 48612612
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  48612646 ggtagatagacgaaatggcaaagccattataaact 48612612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 8856403 - 8856370
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  8856403 gtagatagacgaaatggcaaagccattataaact 8856370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 35376860 - 35376893
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  35376860 gtagatagacgaaatggcaaagccattataaact 35376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 38678163 - 38678196
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  38678163 gtagatagacgaaatggcaaagccattataaact 38678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 40013392 - 40013359
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  40013392 gtagatagacgaaatggcaaagccattataaact 40013359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 4227461 - 4227429
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  4227461 tagatagacgaaatggcaaagccattataaact 4227429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 8946555 - 8946523
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  8946555 tagatagacgaaatggcaaagccattataaact 8946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 10061017 - 10061049
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  10061017 tagatagacgaaatggcaaagccattataaact 10061049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 40656109 - 40656141
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  40656109 tagatagacgaaatggcaaagccattataaact 40656141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 42653166 - 42653198
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  42653166 tagatagacgaaatggcaaagccattataaact 42653198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 46275077 - 46275045
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  46275077 tagatagacgaaatggcaaagccattataaact 46275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 1240 - 1274
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  1240 ggtagatagacgaaatggcaaagccattataaact 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 1057 - 1091
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  1057 ggtagatagacgaaatggcaaagccattataaact 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 735572 - 735538
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  735572 ggtagatagacgaaatggcaaagccattataaact 735538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 1855135 - 1855101
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  1855135 ggtagatagacgaaatggcaaagccattataaact 1855101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 4129074 - 4129040
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4129074 ggtagatagacgaaatggcaaagccattataaact 4129040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 4480603 - 4480569
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4480603 ggtagatagacgaaatggcaaagccattataaact 4480569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 7098935 - 7098901
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  7098935 ggtagatagacgaaatggcaaagccattataaact 7098901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 8448141 - 8448175
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  8448141 ggtagatagacgaaatggcaaagccattataaact 8448175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 8456945 - 8456979
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  8456945 ggtagatagacgaaatggcaaagccattataaact 8456979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 10181174 - 10181140
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  10181174 ggtagatagacgaaatggcaaagccattataaact 10181140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 10330934 - 10330900
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  10330934 ggtagatagacgaaatggcaaagccattataaact 10330900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 12795018 - 12795052
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  12795018 ggtagatagacgaaatggcaaagccattataaact 12795052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 18861766 - 18861800
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  18861766 ggtagatagacgaaatggcaaagccattataaact 18861800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 31444291 - 31444325
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  31444291 ggtagatagacgaaatggcaaagccattataaact 31444325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 32107834 - 32107868
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  32107834 ggtagatagacgaaatggcaaagccattataaact 32107868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 2959121 - 2959088
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  2959121 gtagatagacgaaatggcaaagccattataaact 2959088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 4083715 - 4083682
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  4083715 gtagatagacaaaatggcaaagccattataaact 4083682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 8329558 - 8329591
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  8329558 gtagatagacgaaatggcaaagccattataaact 8329591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 9062976 - 9063009
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  9062976 gtagatagacgaaatggcaaagccattataaact 9063009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 23383056 - 23383089
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  23383056 gtagatagacgaaatggcaaagccattataaact 23383089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 1686232 - 1686264
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  1686232 ggtagatagacgaaatggcaaagccattataaa 1686264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 5660526 - 5660494
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  5660526 tagatagacgaaatggcaaagccattataaact 5660494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 8939753 - 8939721
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  8939753 tagatagacgaaatggcaaagccattataaact 8939721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 16496650 - 16496682
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  16496650 ggtagatagacgaaatggcaaagccattataaa 16496682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 21513203 - 21513171
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  21513203 ggtagatagacgaaatggcaaagccattataaa 21513171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 31205184 - 31205216
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  31205184 tagatagacgaaatggcaaagccattataaact 31205216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 4165088 - 4165054
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4165088 ggtagatagacgaaatggcaaagccattataaact 4165054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4874244 - 4874278
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4874244 ggtagatagacgaaatggcaaagccattataaact 4874278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 6219190 - 6219224
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  6219190 ggtagatagacgaaatggcaaagccattataaact 6219224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 9640533 - 9640567
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  9640533 ggtagatagacgaaatggcaaagccattataaact 9640567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 11968905 - 11968871
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  11968905 ggtagatagacgaaatggcaaagccattataaact 11968871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 12878119 - 12878153
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  12878119 ggtagatagacgaaatggcaaagccattataaact 12878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 16496729 - 16496695
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  16496729 ggtagatagacgaaatggcaaagccattataaact 16496695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 18625614 - 18625648
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  18625614 ggtagatagacgaaatggcaaagccattataaact 18625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 23074643 - 23074677
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  23074643 ggtagatagacgaaatggcaaagccattataaact 23074677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 23311172 - 23311206
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  23311172 ggtagatagacgaaatggcaaagccattataaact 23311206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 25328303 - 25328337
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  25328303 ggtagatagacgaaatggcaaagccattataaact 25328337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 26266998 - 26267032
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26266998 ggtagatagacgaaatggcaaagccattataaact 26267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 26802463 - 26802429
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26802463 ggtagatagacgaaatggcaaagccattataaact 26802429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 26810013 - 26809979
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26810013 ggtagatagacgaaatggcaaagccattataaact 26809979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 26825040 - 26825006
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  26825040 ggtagatagacgaaatggcaaagccattataaact 26825006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 27389926 - 27389960
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  27389926 ggtagatagacgaaatggcaaagccattataaact 27389960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 29119735 - 29119701
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  29119735 ggtagatagacgaaatggcaaagccattataaact 29119701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 34856710 - 34856676
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34856710 ggtagatagacgaaatggcaaagccattataaact 34856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 34930354 - 34930320
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34930354 ggtagatagacgaaatggcaaagccattataaact 34930320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 36569408 - 36569374
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36569408 ggtagatagacgaaatggcaaagccattataaact 36569374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36790314 - 36790348
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36790314 ggtagatagacgaaatggcaaagccattataaact 36790348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36854157 - 36854191
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36854157 ggtagatagacgaaatggcaaagccattataaact 36854191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 37191373 - 37191339
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  37191373 ggtagatagacgaaatggcaaagccattataaact 37191339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 39528059 - 39528025
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  39528059 ggtagatagacgaaatggcaaagccattataaact 39528025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 41071191 - 41071157
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  41071191 ggtagatagacgaaatggcaaagccattataaact 41071157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 42448340 - 42448306
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  42448340 ggtagatagacgaaatggcaaagccattataaact 42448306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 1833319 - 1833352
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  1833319 gtagatagacgaaatggcaaagccattataaact 1833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 6029740 - 6029707
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  6029740 gtagatagacgaaatggcaaagccattataaact 6029707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 20695483 - 20695516
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  20695483 gtagatagacgaaatggcaaagccattataaact 20695516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 24443867 - 24443900
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  24443867 gtagatagacgaaatggcaaagccattataaact 24443900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 38683056 - 38683023
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  38683056 gtagatagacgaaatggcaaagccattataaact 38683023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 40044916 - 40044949
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  40044916 gtagatagacgaaatggcaaagccattataaact 40044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 40318785 - 40318818
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  40318785 gtagatagacgaaatggcaaagccattataaact 40318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 41958029 - 41958062
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  41958029 gtagatagacgaaatggcaaagccattataaact 41958062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 4228982 - 4228950
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  4228982 tagatagacgaaatggcaaagccattataaact 4228950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 12665224 - 12665192
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  12665224 ggtagatagacaaaatggcaaagccattataaa 12665192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 14808964 - 14808932
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  14808964 ggtagatagacgaaatggcaaagccattataaa 14808932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 17869123 - 17869155
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  17869123 ggtagatagacgaaatggcaaagccattataaa 17869155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 18115220 - 18115188
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  18115220 tagatagacgaaatggcaaagccattataaact 18115188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 21728791 - 21728759
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  21728791 ggtagatagacgaaatggcaaagccattataaa 21728759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 23310527 - 23310495
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  23310527 ggtagatagacgaaatggcaaagccattataaa 23310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 24652315 - 24652347
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  24652315 tagatagacgaaatggcaaagccattataaact 24652347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 29806694 - 29806662
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  29806694 tagatagacgaaatggcaaagccattataaact 29806662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 5333205 - 5333239
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  5333205 ggtagatagacgaaatggcaaagccattataaact 5333239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 6487975 - 6487941
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  6487975 ggtagatagacgaaatggcaaagccattataaact 6487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 7512896 - 7512862
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  7512896 ggtagatagacgaaatggcaaagccattataaact 7512862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 12821292 - 12821258
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  12821292 ggtagatagacgaaatggcaaagccattataaact 12821258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 13389149 - 13389115
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  13389149 ggtagatagacgaaatggcaaagccattataaact 13389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 16476936 - 16476970
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  16476936 ggtagatagacgaaatggcaaagccattataaact 16476970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 18813499 - 18813465
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  18813499 ggtagatagacgaaatggcaaagccattataaact 18813465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 21378415 - 21378381
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  21378415 ggtagatagacgaaatggcaaagccattataaact 21378381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 25003861 - 25003827
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  25003861 ggtagatagacgaaatggcaaagccattataaact 25003827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 29428184 - 29428150
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  29428184 ggtagatagacgaaatggcaaagccattataaact 29428150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 30044583 - 30044617
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  30044583 ggtagatagacgaaatggcaaagccattataaact 30044617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 31263500 - 31263534
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  31263500 ggtagatagacgaaatggcaaagccattataaact 31263534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 33416579 - 33416613
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  33416579 ggtagatagacgaaatggcaaagccattataaact 33416613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36526140 - 36526174
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36526140 ggtagatagacgaaatggcaaagccattataaact 36526174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36860848 - 36860882
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36860848 ggtagatagacgaaatggcaaagccattataaact 36860882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 37050830 - 37050796
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  37050830 ggtagatagacgaaatggcaaagccattataaact 37050796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 37166267 - 37166233
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  37166267 ggtagatagacgaaatggcaaagccattataaact 37166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 42856692 - 42856658
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  42856692 ggtagatagacgaaatggcaaagccattataaact 42856658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 46488116 - 46488150
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  46488116 ggtagatagacgaaatggcaaagccattataaact 46488150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 49882708 - 49882742
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  49882708 ggtagatagacgaaatggcaaagccattataaact 49882742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 1982689 - 1982656
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  1982689 gtagatagacaaaatggcaaagccattataaact 1982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 23974642 - 23974675
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  23974642 gtagatagacgaaatggcaaagccattataaact 23974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 24712216 - 24712183
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  24712216 gtagatagacgaaatggcaaagccattataaact 24712183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 36608128 - 36608095
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  36608128 gtagatagacgaaatggcaaagccattataaact 36608095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 50779791 - 50779824
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  50779791 gtagatagacgaaatggcaaagccattataaact 50779824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 579243 - 579275
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  579243 tagatagacgaaatggcaaagccattataaact 579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 1083635 - 1083603
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  1083635 tagatagacgaaatggcaaagccattataaact 1083603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 3848816 - 3848848
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  3848816 ggtagatagacgaaatggcaaagccattataaa 3848848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 4379432 - 4379400
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  4379432 tagatagacgaaatggcaaagccattataaact 4379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 9569602 - 9569570
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  9569602 tagatagacgaaatggcaaagccattataaact 9569570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 9747266 - 9747298
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  9747266 tagatagacgaaatggcaaagccattataaact 9747298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 13632217 - 13632185
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  13632217 tagatagacgaaatggcaaagccattataaact 13632185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 24550940 - 24550908
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  24550940 tagatagacgaaatggcaaagccattataaact 24550908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 25698939 - 25698971
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  25698939 tagatagacgaaatggcaaagccattataaact 25698971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 26872241 - 26872209
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  26872241 ggtagatagacgaaatggcaaagccattataaa 26872209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 31583604 - 31583636
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  31583604 tagatagacgaaatggcaaagccattataaact 31583636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 34567154 - 34567122
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  34567154 tagatagacgaaatggcaaagccattataaact 34567122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 34660789 - 34660821
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  34660789 ggtagatagacgaaatggcaaagccattataaa 34660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 34684329 - 34684297
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  34684329 tagatagacgaaatggcaaagccattataaact 34684297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 35828405 - 35828373
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  35828405 ggtagatagacgaaatggcaaagccattataaa 35828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 42411989 - 42412021
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  42411989 tagatagacgaaatggcaaagccattataaact 42412021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 42550423 - 42550455
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  42550423 tagatagacgaaatggcaaagccattataaact 42550455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 48628465 - 48628497
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  48628465 tagatagacgaaatggcaaagccattataaact 48628497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 4014812 - 4014846
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  4014812 ggtagatagacgaaatggcaaagccattataaact 4014846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 6731671 - 6731637
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  6731671 ggtagatagacgaaatggcaaagccattataaact 6731637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 11061511 - 11061477
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  11061511 ggtagatagacgaaatggcaaagccattataaact 11061477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 11543798 - 11543832
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  11543798 ggtagatagacgaaatggcaaagccattataaact 11543832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 15920613 - 15920647
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  15920613 ggtagatagacgaaatggcaaagccattataaact 15920647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 20251484 - 20251518
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  20251484 ggtagatagacgaaatggcaaagccattataaact 20251518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 23458809 - 23458775
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  23458809 ggtagatagacaaaatggcaaagccattataaact 23458775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 24381374 - 24381340
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  24381374 ggtagatagacgaaatggcaaagccattataaact 24381340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 33607172 - 33607138
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  33607172 ggtagatagacgaaatggcaaagccattataaact 33607138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 34481670 - 34481704
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34481670 ggtagatagacgaaatggcaaagccattataaact 34481704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 34667173 - 34667139
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  34667173 ggtagatagacgaaatggcaaagccattataaact 34667139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 35476489 - 35476523
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  35476489 ggtagatagacgaaatggcaaagccattataaact 35476523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36216752 - 36216786
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36216752 ggtagatagacgaaatggcaaagccattataaact 36216786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 36754740 - 36754774
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36754740 ggtagatagacgaaatggcaaagccattataaact 36754774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 36755077 - 36755043
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36755077 ggtagatagacgaaatggcaaagccattataaact 36755043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 36794933 - 36794899
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  36794933 ggtagatagacgaaatggcaaagccattataaact 36794899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 40812146 - 40812112
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  40812146 ggtagatagacgaaatggcaaagccattataaact 40812112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 44276392 - 44276358
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  44276392 ggtagatagacgaaatggcaaagccattataaact 44276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 44948148 - 44948114
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  44948148 ggtagatagacgaaatggcaaagccattataaact 44948114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 45049514 - 45049480
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  45049514 ggtagatagacgaaatggcaaagccattataaact 45049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 9160958 - 9160925
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  9160958 gtagatagacgaaatggcaaagccattataaact 9160925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 13267975 - 13268008
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  13267975 gtagatagacgaaatggcaaagccattataaact 13268008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 39070147 - 39070114
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  39070147 gtagatagacgaaatggcaaagccattataaact 39070114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 727290 - 727322
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  727290 tagatagacgaaatggcaaagccattataaact 727322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 2624711 - 2624763
Alignment:
Q  71 ttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatcacttt 123  Q
    ||||||||||||||||||||||||| || |||||  ||||| ||| |||||||    
T  2624711 ttgaaatcaatttcaaacaaaacaacatacattctgtttgatatggtcacttt 2624763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 12236250 - 12236218
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  12236250 ggtagatagacgaaatggcaaagccattataaa 12236218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 18778822 - 18778854
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  18778822 ggtagatagacgaaatggcaaagccattataaa 18778854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 28855413 - 28855445
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  28855413 ggtagatagacaaaatggcaaagccattataaa 28855445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 32023382 - 32023350
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  32023382 ggtagatagacgaaatggcaaagccattataaa 32023350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 270322 - 270356
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  270322 ggtagatagacgaaatggcaaagccattataaact 270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 301045 - 301011
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  301045 ggtagatagacgaaatggcaaagccattataaact 301011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 5790197 - 5790163
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  5790197 ggtagatagacgaaatggcaaagccattataaact 5790163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 18089768 - 18089802
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  18089768 ggtagatagacgaaatggcaaagccattataaact 18089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 18475235 - 18475201
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  18475235 ggtagatagacaaaatggcaaagccattataaact 18475201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 19338177 - 19338211
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  19338177 ggtagatagacgaaatggcaaagccattataaact 19338211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 20164072 - 20164106
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  20164072 ggtagatagacgaaatggcaaagccattataaact 20164106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 25820949 - 25820983
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  25820949 ggtagatagacgaaatggcaaagccattataaact 25820983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 27234970 - 27235004
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  27234970 ggtagatagacgaaatggcaaagccattataaact 27235004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 33845603 - 33845637
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  33845603 ggtagatagacgaaatggcaaagccattataaact 33845637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 33948375 - 33948341
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  33948375 ggtagatagacgaaatggcaaagccattataaact 33948341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 39606534 - 39606500
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  39606534 ggtagatagacgaaatggcaaagccattataaact 39606500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 40958573 - 40958607
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  40958573 ggtagatagacgaaatggcaaagccattataaact 40958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 43026020 - 43025986
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  43026020 ggtagatagacgaaatggcaaagccattataaact 43025986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 43500142 - 43500176
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  43500142 ggtagatagacgaaatggcaaagccattataaact 43500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 43676023 - 43676057
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  43676023 ggtagatagacgaaatggcaaagccattataaact 43676057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 48392085 - 48392051
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  48392085 ggtagatagacgaaatggcaaagccattataaact 48392051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 50248158 - 50248124
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaact 294  Q
    ||||||||||| |||||||||||||||||||||||    
T  50248158 ggtagatagacgaaatggcaaagccattataaact 50248124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 8291752 - 8291785
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  8291752 gtagatagacgaaatggcaaagccattataaact 8291785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 12282742 - 12282709
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  12282742 gtagatagacgaaatggcaaagccattataaact 12282709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 18216599 - 18216566
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  18216599 gtagatagacgaaatggcaaagccattataaact 18216566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 10635619 - 10635587
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  10635619 ggtagatagacgaaatggcaaagccattataaa 10635587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 13555722 - 13555754
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  13555722 ggtagatagacgaaatggcaaagccattataaa 13555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 29803174 - 29803206
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  29803174 tagatagacgaaatggcaaagccattataaact 29803206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 36019005 - 36018973
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  36019005 tagatagacgaaatggcaaagccattataaact 36018973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 40685656 - 40685624
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  40685656 tagatagacgaaatggcaaagccattataaact 40685624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 45191561 - 45191593
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  45191561 tagatagacgaaatggcaaagccattataaact 45191593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 90697 - 90664
Alignment:
Q  261 gtagatagactaaatggcaaagccattataaact 294  Q
    |||||||||| |||||||||||||||||||||||    
T  90697 gtagatagacgaaatggcaaagccattataaact 90664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 948 - 916
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  948 ggtagatagacgaaatggcaaagccattataaa 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 2976 - 3028
Alignment:
Q  71 ttgaaatcaatttcaaacaaaacaatatgcattccatttgaaatgatcacttt 123  Q
    |||||||||||||||||||  |||  ||||||||||||||||||  |||||||    
T  2976 ttgaaatcaatttcaaacacgacatcatgcattccatttgaaatagtcacttt 3028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 7562 - 7530
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  7562 ggtagatagacgaaatggcaaagccattataaa 7530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 472 - 440
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  472 tagatagacgaaatggcaaagccattataaact 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 2605 - 2573
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  2605 tagatagacgaaatggcaaagccattataaact 2573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 2605 - 2573
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  2605 tagatagacgaaatggcaaagccattataaact 2573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 7758 - 7790
Alignment:
Q  262 tagatagactaaatggcaaagccattataaact 294  Q
    ||||||||| |||||||||||||||||||||||    
T  7758 tagatagacgaaatggcaaagccattataaact 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 160578 - 160546
Alignment:
Q  260 ggtagatagactaaatggcaaagccattataaa 292  Q
    ||||||||||| |||||||||||||||||||||    
T  160578 ggtagatagacgaaatggcaaagccattataaa 160546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University