View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5058_low_9 (Length: 212)
Name: NF5058_low_9
Description: NF5058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5058_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 41288433 - 41288320
Alignment:
| Q |
92 |
acagttttaacaacctgagcctcttcatcaccatgaatacaagaaaacccaacatcctcaggataagcaggtaagnnnnnnnncacaataaccccaccaa |
191 |
Q |
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| T |
41288433 |
acagttttaacaacctgagcctcttcatcaccatgaatacaagaaaacccaacatcctcaggataagcaggtaagaaaaaaaacacaataaccccaccaa |
41288334 |
T |
|
| Q |
192 |
gaataatctaccca |
205 |
Q |
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|||||| ||||| |
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| T |
41288333 |
acataatcaaccca |
41288320 |
T |
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