View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5061-Insertion-10 (Length: 284)

Name: NF5061-Insertion-10
Description: NF5061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5061-Insertion-10
NF5061-Insertion-10
[»] chr7 (1 HSPs)
chr7 (8-284)||(42450954-42451229)


Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 8 - 284
Target Start/End: Original strand, 42450954 - 42451229
Alignment:
Q  8 catgttgcttgatcctttacattgttcctaggagtagggttctaaagcgtgttttagtcccttatttattgttgattcttttctgtcttgtatttgggac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42450954 catgttgcttgatcctttacattgttcctaggagtagggttctaaagcgtgttttagtcccttatttattgttgattcttttctgtcttgtatttgggac 42451053  T
Q  108 actagatgatgttccttcacgtatcattagcttaatttgtgatttcactaatccaaaagtttaatttatgcttgcctgtgtatttggctaagattttgat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42451054 actagatgatgttccttcacgtatcattagcttaatttgtgatttcactaatccaaaagtttaatttatgcttg-ctgtgtatttggctaagattttgat 42451152  T
Q  208 ttaattgtataatttacttatcagcttctatcattactttagtactgtgtgctggctgctatgaaatggattgtgca 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42451153 ttaattgtataatttacttatcagcttctatcattactttagtactgtgtgctggctgctatgaaatggattgtgca 42451229  T

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