View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5061-Insertion-5 (Length: 374)

Name: NF5061-Insertion-5
Description: NF5061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5061-Insertion-5
NF5061-Insertion-5
[»] chr2 (14 HSPs)
chr2 (14-210)||(5951695-5951892)
chr2 (209-374)||(36314533-36314698)
chr2 (209-374)||(1593050-1593214)
chr2 (273-374)||(1043313-1043413)
chr2 (273-374)||(9190302-9190402)
chr2 (209-373)||(10585033-10585195)
chr2 (277-374)||(5382644-5382744)
chr2 (277-360)||(41732610-41732692)
chr2 (278-336)||(2096103-2096160)
chr2 (316-374)||(7494759-7494817)
chr2 (304-361)||(21278638-21278695)
chr2 (277-341)||(14160584-14160647)
chr2 (277-331)||(21613390-21613443)
chr2 (284-360)||(10412674-10412748)
[»] scaffold0049 (2 HSPs)
scaffold0049 (209-374)||(46806-46970)
scaffold0049 (273-374)||(14998-15098)
[»] chr6 (7 HSPs)
chr6 (209-374)||(3886072-3886236)
chr6 (198-374)||(583278-583453)
chr6 (273-374)||(29363864-29363964)
chr6 (283-374)||(34729511-34729601)
chr6 (273-374)||(30386781-30386881)
chr6 (277-360)||(13703074-13703156)
chr6 (278-360)||(7590494-7590575)
[»] chr8 (5 HSPs)
chr8 (216-374)||(18605957-18606114)
chr8 (273-374)||(21441913-21442013)
chr8 (273-374)||(4072547-4072647)
chr8 (273-374)||(41323501-41323601)
chr8 (283-344)||(30932154-30932214)
[»] chr7 (19 HSPs)
chr7 (273-373)||(45809960-45810059)
chr7 (204-374)||(48609425-48609594)
chr7 (272-374)||(83937-84038)
chr7 (273-374)||(46211996-46212096)
chr7 (273-369)||(2826743-2826838)
chr7 (277-361)||(758571-758654)
chr7 (304-360)||(27098887-27098943)
chr7 (304-360)||(27179360-27179416)
chr7 (277-360)||(23333303-23333385)
chr7 (311-374)||(39719643-39719706)
chr7 (304-358)||(5437147-5437201)
chr7 (277-330)||(27571631-27571683)
chr7 (307-358)||(11468629-11468680)
chr7 (277-331)||(41532411-41532464)
chr7 (283-328)||(2410957-2411001)
chr7 (283-360)||(33036082-33036158)
chr7 (275-320)||(39719308-39719352)
chr7 (273-337)||(33335981-33336044)
chr7 (304-344)||(36558373-36558413)
[»] chr1 (15 HSPs)
chr1 (273-373)||(7493393-7493492)
chr1 (275-374)||(10619791-10619889)
chr1 (275-374)||(44429797-44429895)
chr1 (273-374)||(15757402-15757502)
chr1 (277-360)||(43410937-43411019)
chr1 (277-360)||(44592587-44592669)
chr1 (316-371)||(48770403-48770458)
chr1 (277-360)||(27773553-27773635)
chr1 (304-358)||(29681104-29681158)
chr1 (283-337)||(39618458-39618511)
chr1 (283-360)||(43022555-43022631)
chr1 (283-357)||(36156955-36157028)
chr1 (307-360)||(6764515-6764568)
chr1 (278-331)||(50099606-50099658)
chr1 (278-327)||(50303966-50304014)
[»] chr5 (8 HSPs)
chr5 (273-374)||(17769296-17769396)
chr5 (273-374)||(39685648-39685749)
chr5 (278-374)||(13517244-13517338)
chr5 (277-360)||(39570831-39570913)
chr5 (277-336)||(6735911-6735969)
chr5 (277-331)||(21360904-21360957)
chr5 (304-356)||(13734620-13734672)
chr5 (308-360)||(42580462-42580514)
[»] chr4 (16 HSPs)
chr4 (273-374)||(13768524-13768624)
chr4 (208-373)||(46721801-46721964)
chr4 (283-374)||(43892842-43892932)
chr4 (275-374)||(32824585-32824683)
chr4 (277-360)||(27512922-27513004)
chr4 (277-360)||(32595097-32595179)
chr4 (278-360)||(23237516-23237597)
chr4 (277-360)||(39606296-39606378)
chr4 (278-360)||(4608124-4608205)
chr4 (278-331)||(18493820-18493872)
chr4 (278-331)||(22375925-22375977)
chr4 (278-331)||(54508598-54508650)
chr4 (276-360)||(20618755-20618838)
chr4 (291-344)||(21733894-21733946)
chr4 (278-331)||(34021335-34021387)
chr4 (283-327)||(23609302-23609345)
[»] chr3 (12 HSPs)
chr3 (273-374)||(46823530-46823630)
chr3 (273-374)||(17653307-17653407)
chr3 (209-373)||(30342596-30342758)
chr3 (283-360)||(35238708-35238784)
chr3 (278-360)||(22775259-22775340)
chr3 (275-360)||(40285633-40285716)
chr3 (276-360)||(35734411-35734494)
chr3 (277-336)||(37057524-37057582)
chr3 (277-360)||(37224390-37224472)
chr3 (278-336)||(26769844-26769901)
chr3 (283-344)||(30500937-30500997)
chr3 (316-368)||(21295699-21295751)


Alignment Details
Target: chr2 (Bit Score: 170; Significance: 4e-91; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 5951695 - 5951892
Alignment:
Q  14 actgttggtagaaaaatatataagtaccaaacaaaaattagattctcatttttacattagtctgtttttgccaaaagcaattgagtccaccacttcttat 113  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5951695 actgttggtagaaaaatgtataagtacaaaacaaaaattagattctcatttttacattagtctgtttttgccaaaagcaattgagtccaccacttcttat 5951794  T
Q  114 attggagttttatgtgaacaatataatttcaaaattatgttggtttgcattctctaatcacattagtggtgag-atgttgcatacaatattataatca 210  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5951795 attgcagttttatgtgaacaatataatttcaaaattatgtcgttttgcattctctaatcacattagtggtgagaatgttgcatacaatattataatca 5951892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 209 - 374
Target Start/End: Complemental strand, 36314698 - 36314533
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||||||        ||||||||| ||||||||||||||||| |  |||||    
T  36314698 caggggcggttgctagtataaggaagaggtagccatggctacctcaaaaataaatatttttttgagcgagtaggtatatttttatatttagtta-cccct 36314600  T
Q  309 aataatatatatttggctaccccca-gttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36314599 aataatatatatttggctacccccaagttttattttaaatgaaataattttttccatctttatttaa 36314533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 209 - 374
Target Start/End: Complemental strand, 1593214 - 1593050
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||||||        ||||||| | ||||||||||||||||| |  |||||    
T  1593214 caggggcggttgctagtataaggaagaggtagccatggctacctcaaaaataaatatttttttgagcgagttggtatatttttatatttagtta-cccct 1593116  T
Q  309 aataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1593115 aataatatatatttggctaccccaagttttattttaaatgaaataattttttccatctttatttaa 1593050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 1043413 - 1043313
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  1043413 agcgagtaggtatatttttatatttagcta-cccctaataatatttatttggctaccccaagtttaattttaagtgaaataatttttactatctttattt 1043315  T
Q  373 aa 374  Q
    ||    
T  1043314 aa 1043313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 9190402 - 9190302
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  9190402 agcgagtaggtatatttttatatttagcta-cccctaataatatttatttggctaccccaagtttaattttaagtgaaataatttttactatctttattt 9190304  T
Q  373 aa 374  Q
    ||    
T  9190303 aa 9190302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 10585033 - 10585195
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||||||||| |||| ||||| ||||||||||||||||| |  ||||| |||||       | ||||||||  |||||||||| |||||||  |||||    
T  10585033 caggggcggttgctagtgtaagggagaggtagccatggctaccccaaaaaaaaatattttttga-gcgagtagggatatttttatttttagcta-cccct 10585130  T
Q  309 aataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattta 373  Q
    |||||||||||||| |||| ||| | ||||||||||| |||||||||| ||||||||||||||||    
T  10585131 aataatatatatttagctatcccaaattttattttaagtgaaataattctttccatctttattta 10585195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 5382744 - 5382644
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatat--ttggctacccccagtttta-ttttaaa-tgaaataattttttccatctttattt 372  Q
    ||||| |||||||||||||||||||  |||||||||||||||||  || ||||||||||  |||| ||||||| ||||||||||||||| ||||||||||    
T  5382744 agtaggtatatttttatatttagcta-cccctaataatatatatatttagctacccccaaatttaattttaaagtgaaataattttttctatctttattt 5382646  T
Q  373 aa 374  Q
    ||    
T  5382645 aa 5382644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 41732692 - 41732610
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||| ||||||||| |||||  |||||||||||||||||||||||||||| ||||  ||||||  ||||||||||||||    
T  41732692 agtaggtatgtttttatatgtagcta-cccctaataatatatatttggctaccccaagttagattttagttgaaataatttttt 41732610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 2096103 - 2096160
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagtt 336  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||    
T  2096103 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagtt 2096160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 7494759 - 7494817
Alignment:
Q  316 tatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||| |||||||| | ||| ||||||| ||||||||||||||| ||||||||||||    
T  7494759 tatatttagctaccccaaatttaattttaagtgaaataattttttctatctttatttaa 7494817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 21278638 - 21278695
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataattttttc 361  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||  |||||||||||||||    
T  21278638 cccctaataatatttatttgactaccccaagtttgattttagttgaaataattttttc 21278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 14160647 - 14160584
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttatt 341  Q
    ||||| ||||||| |||| ||||||  |||||||||||||||| ||||||||||| |||||||||    
T  14160647 agtaggtatatttgtatacttagcta-cccctaataatatatagttggctaccccaagttttatt 14160584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 21613443 - 21613390
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    ||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||    
T  21613443 agtaggtatattattatatttggcta-cccctaataatatatatttggctacccc 21613390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 10412674 - 10412748
Alignment:
Q  284 atatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||||||| | | ||||||||||| |||| |||| ||| | ||||||||||| |||| |||||||||    
T  10412674 atatttttatatttagctat-ctctaataatatacatttagcta-cccaaattttattttaagtgaactaatttttt 10412748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 209 - 374
Target Start/End: Original strand, 46806 - 46970
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||||||        || |||||| |||||||||||||||||||  |||||    
T  46806 caggggcggttgctagtataaggaagaggtagccatggctacctcaaaaataaatatttttttgagtgagtaggtatatttttatatttagcta-cccct 46904  T
Q  309 aataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46905 aataatatatatttggctaccccaagttttattttaaatgaaataattttttccatctttatttaa 46970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 14998 - 15098
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||| ||||||  ||||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||||| ||||||||||    
T  14998 agcgagtaggtatatttttataattagcta-cccctaataatatatatttagctaccccaaatttaattttaagtgaaataattttttctatctttattt 15096  T
Q  373 aa 374  Q
    ||    
T  15097 aa 15098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 209 - 374
Target Start/End: Original strand, 3886072 - 3886236
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||| ||||| |||||||||||||||||||||||||||| || |||||||||||        ||||||||| |||||||||||||||||||  |||||    
T  3886072 caggggtggttgctagtataaggaagaggtagccatggctacctcaaaaataaatatttttttgagcgagtaggtatatttttatatttagcta-cccct 3886170  T
Q  309 aataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3886171 aataatatatatttggctaccccaagttttattttaaatgaaataattttttccatctttatttaa 3886236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 198 - 374
Target Start/End: Complemental strand, 583453 - 583278
Alignment:
Q  198 aatattataatcaggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatattt 297  Q
    |||| ||||| |||||||||||| ||||||||||||||||||| |||||||| || |||||||||||        ||||||||| |||||||||||||||    
T  583453 aataatataagcaggggcggttgctagtataaggaagaggtagtcatggctacctcaaaaataaatatttttttgagcgagtaggtatatttttatattt 583354  T
Q  298 agctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  583353 agcta-cccctaataatatatatttggttaccccaagttttattttaaatgaaataattttttccatctttatttaa 583278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 29363964 - 29363864
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||||| ||||||||||    
T  29363964 agcgagtaggtatatttttatatttagcta-ctcctaataatatatatttagctaccccaaatttaattttaagtgaaataattttttctatctttattt 29363866  T
Q  373 aa 374  Q
    ||    
T  29363865 aa 29363864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 34729511 - 34729601
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||||||||    
T  34729511 tatatttttatatttagcta-cccctaatagtatatatttagctaccccaagtttaattttaagtgaaataattttttctatctttatttaa 34729601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 30386881 - 30386781
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| |||| | | ||||| ||||||| ||||||| ||||||| ||||||||||    
T  30386881 agcgagtaggtatatttttatatttagcta-cccctaataatatatatttagctatctcaagtttaattttaagtgaaatatttttttctatctttattt 30386783  T
Q  373 aa 374  Q
    ||    
T  30386782 aa 30386781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 13703074 - 13703156
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||| |||||| | ||||| |||||| |||||||||||||||    
T  13703074 agtaggtatatttttatatttagcta-cccctaataatatatatttagctacctcaagtttaattttagatgaaataatttttt 13703156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 7590575 - 7590494
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||  |||||| ||| |||||||||||    
T  7590575 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagttcgattttagatgtaataatttttt 7590494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 216 - 374
Target Start/End: Original strand, 18605957 - 18606114
Alignment:
Q  216 ggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccctaataata 315  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||        ||||||||| |||||||||||||||||||  ||||||||||||    
T  18605957 ggttgctagtataaggaagaggtagccatggctatctcaaaaataaatatttttttgagcgagtaggtatatttttatatttagcta-cccctaataata 18606055  T
Q  316 tatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18606056 tatatttggctaccccaagttttattttaagtgaaataattttttccatctttatttaa 18606114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 21442013 - 21441913
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  21442013 agcgagtaggtatatttttatatttagcta-cccctaataatatatatttagctaccccaagtttaattttagatgaaataattttttctatctttattt 21441915  T
Q  373 aa 374  Q
    ||    
T  21441914 aa 21441913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 4072647 - 4072547
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| || |||||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  4072647 agcgagtaggtatatttttatatttagcta-cccctaataatatataattagctaccccaagtttaattttagatgaaataattttttctatctttattt 4072549  T
Q  373 aa 374  Q
    ||    
T  4072548 aa 4072547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 41323601 - 41323501
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| || |||||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  41323601 agcgagtaggtatatttttatatttagcta-cccctaataatatataattagctaccccaagtttaattttagatgaaataattttttctatctttattt 41323503  T
Q  373 aa 374  Q
    ||    
T  41323502 aa 41323501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 30932214 - 30932154
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttatttta 344  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||||| ||||||    
T  30932214 tatatttttatattaagctgtccc-taataatatatgtttggctatcccaagtttgatttta 30932154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 373
Target Start/End: Complemental strand, 45810059 - 45809960
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  45810059 agcgagtaggtatatttttatatttagctaccccc-aataatatatatttggctaccccaagttttattttaagtgaaataattttttccatctttattt 45809961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 48609594 - 48609425
Alignment:
Q  204 ataatcaggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgt 303  Q
    |||||||||||||| |||||||| |||| || ||||||| | |||| |  ||||| |||||        ||||||| | |||||||||||||||| ||      
T  48609594 ataatcaggggcggatggtagtacaagggaggggtagcccttgctaccccaaaaaaaaatatttttctgagcgagtgggtatatttttatatttaacta- 48609496  T
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||||||||    
T  48609495 cccctaataatatatatttagctaccccaagtttaattttaagtgaaataattttttctatctttatttaa 48609425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 84038 - 83937
Alignment:
Q  272 aagcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatt 371  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||| | |||||| | ||| ||||||| |||||||| |||||| |||||||||    
T  84038 aagcgagtaggtatatttttatatttagcta-cccctaataatatatatttagttaccccaaatttaattttaagtgaaataaatttttctatctttatt 83940  T
Q  372 taa 374  Q
    |||    
T  83939 taa 83937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 46212096 - 46211996
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  |  |||||||||||||||| |||||||| | ||| ||||||| |||||||||||||||  |||||||||    
T  46212096 agcgagtaggtatatttttatatttagcta-cttctaataatatatatttagctaccccaaatttaattttaagtgaaataattttttctttctttattt 46211998  T
Q  373 aa 374  Q
    ||    
T  46211997 aa 46211996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 2826743 - 2826838
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatcttta 369  Q
    ||||| ||| ||||||||||||||||||| || | ||||||||||||||| ||||| || ||||| ||| ||| ||||||||||||||| |||||||    
T  2826743 agcgattaggtatatttttatatttagctatctc-taataatatatatttagctactccaagtttaattgtaagtgaaataattttttctatcttta 2826838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 758571 - 758654
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttc 361  Q
    ||||| |||||||||||||||| ||  ||| ||||||||||||||| |||||||| | ||| ||||||| |||||||||||||||    
T  758571 agtaggtatatttttatatttatcta-cccttaataatatatatttagctaccccaaatttaattttaagtgaaataattttttc 758654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 27098943 - 27098887
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||||||||||||| ||| | ||| |||||||||| |||||||||||    
T  27098943 cccctaataatatatatttggctatcccaaatttaattttaaatgtaataatttttt 27098887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 27179360 - 27179416
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||||||||||||| ||| | ||| |||||||||| |||||||||||    
T  27179360 cccctaataatatatatttggctatcccaaatttaattttaaatgtaataatttttt 27179416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 23333385 - 23333303
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  ||||||||||||||||||||||||| || ||||  ||||||  || |||||||||||    
T  23333385 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctactccaagttcgattttaggtgcaataatttttt 23333303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 39719643 - 39719706
Alignment:
Q  311 taatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    |||||||||||| |||| |||  |||| |||||| |||||||||||||||| ||||||||||||    
T  39719643 taatatatatttagctatcccaggtttaattttagatgaaataattttttctatctttatttaa 39719706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 5437201 - 5437147
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataatttt 358  Q
    ||||| |||||||||||||||||||||| ||||| ||||||  ||||||||||||    
T  5437201 cccctgataatatatatttggctaccccaagtttgattttagttgaaataatttt 5437147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 27571683 - 27571631
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctaccc 330  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||    
T  27571683 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccc 27571631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 11468629 - 11468680
Alignment:
Q  307 ctaataatatatatttggctacccccagttttattttaaatgaaataatttt 358  Q
    ||||||||||||||||||||||| | ||||| ||||||  ||||||||||||    
T  11468629 ctaataatatatatttggctacctcaagtttgattttagttgaaataatttt 11468680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 41532411 - 41532464
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    ||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||    
T  41532411 agtaggtatattattatatttggcta-cccctaataatatatatttggctacccc 41532464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 2410957 - 2411001
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctac 328  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||    
T  2410957 tatatttttatattaagcta-cccctaataatatatatttggctac 2411001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 33036158 - 33036082
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||  ||||||  || |||||||||||    
T  33036158 tatatttttatgtttaacta-cccctgataatatatatttggctaccccaagttcgattttaggtgtaataatttttt 33036082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 39719308 - 39719352
Alignment:
Q  275 cgagtagatatatttttatatttagctgtcccctaataatatatat 320  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  39719308 cgagtaggtatatttttatatttagctat-ccctaataatatatat 39719352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 33336044 - 33335981
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttt 337  Q
    |||| |||| ||||| |||||||||||||  |||||||||||||||||||  ||||||| |||||    
T  33336044 agcgggtaggtatatatttatatttagcta-cccctaataatatatatttaactaccccaagttt 33335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 36558373 - 36558413
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttatttta 344  Q
    |||||||||||||||||||||||||| | ||||| ||||||    
T  36558373 cccctaataatatatatttggctacctcaagtttgatttta 36558413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 273 - 373
Target Start/End: Original strand, 7493393 - 7493492
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  | || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  7493393 agcgagtaggtatatttttatatttagctacctcc-aataatatatatttggctaccccaagttttattttaagtgaaataattttttccatctttattt 7493491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 10619791 - 10619889
Alignment:
Q  275 cgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||| ||||||||||||    
T  10619791 cgagtaggtatatttttatatttagcta-cccctaataatatatatttagctaccccaagtttaattttagatgaaataattttttctatctttatttaa 10619889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 44429895 - 44429797
Alignment:
Q  275 cgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||| | ||| ||||||| ||||||||||||| | ||||||||||||    
T  44429895 cgagtaggtatatttttatatttagcta-cccctaataatatttatttggctaccccaaatttaattttaagtgaaataatttttactatctttatttaa 44429797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 15757402 - 15757502
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||| ||  |||||||||||||||||||  ||||||| ||||| |||||| |||||||||| ||||| ||||||||||    
T  15757402 agcgagtaggtatatttttatatttatcta-cccctaataatatatatttaactaccccaagtttaattttagatgaaataatattttctatctttattt 15757500  T
Q  373 aa 374  Q
    ||    
T  15757501 aa 15757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 43410937 - 43411019
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||  ||||| |||||| ||| |||||||||||    
T  43410937 agtaggtatatttttatatttagctatccc-taataatatatatttggttaccctaagtttgattttagatgtaataatttttt 43411019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 44592587 - 44592669
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||| ||||||  || |||||||||||    
T  44592587 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagtttgattttaggtgtaataatttttt 44592669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 48770403 - 48770458
Alignment:
Q  316 tatatttggctacccccagttttattttaaatgaaataattttttccatctttatt 371  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  48770403 tatatttagctaccccaagttttattttaagtgaaataattttttctatctttatt 48770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 27773553 - 27773635
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||  ||||||  || |||||||||||    
T  27773553 agtaggtatatttttatgtttagcta-cccctaataatatatatttgcctaccccaagttcgattttaggtgtaataatttttt 27773635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 358
Target Start/End: Original strand, 29681104 - 29681158
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataatttt 358  Q
    ||||| |||||||||||||||||||||| ||||| ||||||  ||||||||||||    
T  29681104 cccctgataatatatatttggctaccccaagtttgattttagttgaaataatttt 29681158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 39618511 - 39618458
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttt 337  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| |||||    
T  39618511 tatatttttatattaagcta-cccctaataatatatatttggctaccccaagttt 39618458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 43022555 - 43022631
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||||||||| |||| ||  |||||||||||||||||||||||||||  ||||  |||||| ||| |||||||||||    
T  43022555 tatatttttatgtttaacta-cccctaataatatatatttggctacccaaagttcgattttagatgtaataatttttt 43022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 36157028 - 36156955
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattt 357  Q
    |||||||||||  ||||||  |||||||||||||||||||||||||||| ||||  ||||||  || ||||||||    
T  36157028 tatatttttatgcttagcta-cccctaataatatatatttggctaccccaagttcaattttaggtgtaataattt 36156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 6764515 - 6764568
Alignment:
Q  307 ctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||||||||||||||||||| ||| | ||| |||||| ||| |||||||||||    
T  6764515 ctaataatatatatttggctatcccaaatttaattttagatggaataatttttt 6764568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 50099606 - 50099658
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  50099606 gtaggtatatttttatgtttagcta-cccctaataatatatatttgactacccc 50099658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 50304014 - 50303966
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggcta 327  Q
    |||| ||||||||||| |||||||  ||||||||||||||||||||||||    
T  50304014 gtaggtatatttttatgtttagcta-cccctaataatatatatttggcta 50303966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 17769396 - 17769296
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  17769396 agcgagtaggtatatttttatatttagcta-cccctaataatatatatttagctaccccaagtttaattttagatgaaataattttttctatctttattt 17769298  T
Q  373 aa 374  Q
    ||    
T  17769297 aa 17769296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 39685749 - 39685648
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| || |||||||    
T  39685749 agcgagtaggtatatttttatatttagctatcctctaataatatatatttagctaccccaagtttaattttaagtgaaataattttttctatttttattt 39685650  T
Q  373 aa 374  Q
    ||    
T  39685649 aa 39685648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 13517244 - 13517338
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    |||| |||||||||||||||||||   ||||||||||||||||||  ||||||| ||||| |||||| |||||||||||||||  ||||||||||||    
T  13517244 gtaggtatatttttatatttagcta--ccctaataatatatatttaactaccccaagtttaattttagatgaaataattttttttatctttatttaa 13517338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 39570831 - 39570913
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||  ||||||  || |||||||||||    
T  39570831 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagttcgattttaggtgtaataatttttt 39570913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 6735911 - 6735969
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagtt 336  Q
    ||||| |||||||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  6735911 agtaggtatatttttatatttagcta-cctctaataatatatatttggctaccccaagtt 6735969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 21360904 - 21360957
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    ||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||    
T  21360904 agtaggtatattattatatttggcta-cccctaataatatatatttggctacccc 21360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 13734620 - 13734672
Alignment:
Q  304 cccctaataatatatatttggctacccccagttttattttaaatgaaataatt 356  Q
    ||||||||||||||||||||| || ||  ||||| |||||| |||||||||||    
T  13734620 cccctaataatatatatttggttatcctaagtttgattttagatgaaataatt 13734672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 42580462 - 42580514
Alignment:
Q  308 taataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||||||||| ||| | ||| ||||||  ||||||||||||||    
T  42580462 taataatatatatttggctatcccaattttgattttaggtgaaataatttttt 42580514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 13768524 - 13768624
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||||||    
T  13768524 agcgagtaggtatatttttatatttagcta-cccctaataatatatatttagctaccccaagtttaattttaagtgaaataattttttctatctttattt 13768622  T
Q  373 aa 374  Q
    ||    
T  13768623 aa 13768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 46721801 - 46721964
Alignment:
Q  208 tcaggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccc 307  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| |  ||||| ||| |        |||||||||  |||||||||| |||||||  ||||    
T  46721801 tcaggggcggttgctagtgtaagggagaggtagccatggctacccaaaaaaaaaa-atttttttgagcgagtagggatatttttatttttagcta-cccc 46721898  T
Q  308 taataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattta 373  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  46721899 taataatatatatttagctaccccaaattttattttaagtgaaataattctttccatctttattta 46721964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 43892932 - 43892842
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| |||| ||||| |||||| |||||||||||||||| ||||||||||||    
T  43892932 tatatttttatatttagcta-cccctaataatatatatttagctgccccaagtttaattttagatgaaataattttttctatctttatttaa 43892842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 32824683 - 32824585
Alignment:
Q  275 cgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttatttaa 374  Q
    ||||||| |||||||||||||||| ||  |||||| ||||| ||||||||||| ||| | ||||||||||| |||||||||||||| ||| |||||||||    
T  32824683 cgagtaggtatatttttatatttaacta-cccctagtaataaatatttggctatcccaaattttattttaagtgaaataatttttttcatttttatttaa 32824585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 27512922 - 27513004
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||  ||||||  || |||||||||||    
T  27512922 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagttcgattttaggtgtaataatttttt 27513004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 32595179 - 32595097
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||  ||||||  || |||||||||||    
T  32595179 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagttcgattttaggtgcaataatttttt 32595097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 23237597 - 23237516
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||| ||||||||||| |||||||  ||||||||||||||||||||||| |||| ||||  |||||| ||| |||||||||||    
T  23237597 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctgccccaagttcgattttagatgtaataatttttt 23237516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 39606378 - 39606296
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||| | ||||  ||||||  || |||||||||||    
T  39606378 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctacctcaagttcgattttaggtgcaataatttttt 39606296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 4608124 - 4608205
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||| | ||||  |||||| ||| ||| |||||||    
T  4608124 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctacctcaagttcgattttagatgtaatcatttttt 4608205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 18493872 - 18493820
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    |||| ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  18493872 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctacccc 18493820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 22375977 - 22375925
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    |||| ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  22375977 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctacccc 22375925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 54508650 - 54508598
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    |||| ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  54508650 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctacccc 54508598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 20618755 - 20618838
Alignment:
Q  276 gagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||| ||||||||| |||| ||||  ||||||||||||||| |||||||||||| | ||| |||||| ||  |||||||||||    
T  20618755 gagtaggtatatttttgtattaagcta-cccctaataatatatgtttggctaccccaaatttaattttagatagaataatttttt 20618838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 21733894 - 21733946
Alignment:
Q  291 tatatttagctgtcccctaataatatatatttggctacccccagttttatttta 344  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||| ||||||    
T  21733894 tatatttagcta-cccctaataatatatagttggctaccccaagtttgatttta 21733946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 34021387 - 34021335
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccc 331  Q
    |||| ||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  34021387 gtaggtatatttttatgtttagcta-cccctaatagtatatatttggctacccc 34021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 23609345 - 23609302
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggcta 327  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||    
T  23609345 tatatttttatattttgctatccc-taataatatatatttggcta 23609302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 46823530 - 46823630
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| || |||||||| ||||| |||||| |||||||||||||||| ||||||||||    
T  46823530 agcgagtaggtatatttttatatttagcta-cccctaataatatataattagctaccccaagtttaattttagatgaaataattttttctatctttattt 46823628  T
Q  373 aa 374  Q
    ||    
T  46823629 aa 46823630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 17653407 - 17653307
Alignment:
Q  273 agcgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattt 372  Q
    ||||||| | |||||||||||||||| ||  ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||||||    
T  17653407 agcgagtgggtatatttttatatttaacta-cccctaataatatatatttagctaccccaagtttaattttaagtgaaataattttttctatctttattt 17653309  T
Q  373 aa 374  Q
    ||    
T  17653308 aa 17653307  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 30342596 - 30342758
Alignment:
Q  209 caggggcggttggtagtataaggaagaggtagccatggctatcttaaaaataaatannnnnnnaagcgagtagatatatttttatatttagctgtcccct 308  Q
    |||||||||||| |||| ||||| ||||||||||||||||| |  ||||| |||||       | ||||||||  |||||||||| |||| ||  || ||    
T  30342596 caggggcggttgctagtgtaagggagaggtagccatggctaccccaaaaaaaaatattttttga-gcgagtagggatatttttatttttaacta-cctct 30342693  T
Q  309 aataatatatatttggctacccccagttttattttaaatgaaataattttttccatctttattta 373  Q
    |||||||||||||| |||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  30342694 aataatatatatttagctaccccaaattttattttaagtgaaataattctttccatctttattta 30342758  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 35238784 - 35238708
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  35238784 tatatttttatattaagcta-cccctaataatatatatttggctaccccaagtttaattttagatgaattgatttttt 35238708  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 22775340 - 22775259
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||  ||||||  || |||||||||||    
T  22775340 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagttcgattttaggtgtaataatttttt 22775259  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 40285633 - 40285716
Alignment:
Q  275 cgagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||| |||| | | ||||| ||||||| ||||||| ||||||    
T  40285633 cgagtagatatatttt-atatttagctatccc-taataatatatatttagctatctcaagtttgattttaagtgaaatattttttt 40285716  T

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Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 35734494 - 35734411
Alignment:
Q  276 gagtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    |||||| ||||||||||||||||| |  ||| ||||||||| ||||| |||||||  | ||||||||||| ||||||||||||||    
T  35734494 gagtaggtatatttttatatttagtta-cccttaataatatgtatttagctaccctaaattttattttaagtgaaataatttttt 35734411  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 37057524 - 37057582
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagtt 336  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||    
T  37057524 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagtt 37057582  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 37224390 - 37224472
Alignment:
Q  277 agtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagttttattttaaatgaaataatttttt 360  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||| ||| ||||  ||||||  || |||||||||||    
T  37224390 agtaggtatatttttatgtttagcta-cccctaataatatatatttggctatcccaagttcgattttaggtgtaataatttttt 37224472  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 26769901 - 26769844
Alignment:
Q  278 gtagatatatttttatatttagctgtcccctaataatatatatttggctacccccagtt 336  Q
    |||| ||||||||||| |||||||  |||||||||||||||||||||||||||| ||||    
T  26769901 gtaggtatatttttatgtttagcta-cccctaataatatatatttggctaccccaagtt 26769844  T

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Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 30500997 - 30500937
Alignment:
Q  283 tatatttttatatttagctgtcccctaataatatatatttggctacccccagttttatttta 344  Q
    |||||||||||||| ||||  ||||||||||||||||| |||||||||| ||||| ||||||    
T  30500997 tatatttttatattaagcta-cccctaataatatatatctggctaccccaagtttgatttta 30500937  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 21295699 - 21295751
Alignment:
Q  316 tatatttggctacccccagttttattttaaatgaaataattttttccatcttt 368  Q
    ||||||| |||||||| | ||| |||||| |||||||||||||||| ||||||    
T  21295699 tatatttagctaccccaaatttaattttagatgaaataattttttctatcttt 21295751  T

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