View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5061-Insertion-6 (Length: 362)
Name: NF5061-Insertion-6
Description: NF5061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5061-Insertion-6 |
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Alignment Details
Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 7 - 359
Target Start/End: Original strand, 42222842 - 42223191
Alignment:
| Q |
7 |
aattagaaagcaaaattctagtttggttttatgactttgtctttcgctcgtactttggagtggtcttctttt-ggcgaagggagttgcattgtggtcttc |
105 |
Q |
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| T |
42222842 |
aattagaaagcaaaattctagtttggttttatgactttatctttcgctcgtactttggagtggtcttctttttggcgaagggagttgcattgtggtcttc |
42222941 |
T |
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| Q |
106 |
tagtttggcttttcctctatttgagatttattgactactttagtttacatgttattgcgcaggtgaacgtttaagcccttgggtggccgctggatgtttt |
205 |
Q |
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| T |
42222942 |
tagtttggcttttcctctattcgagatttattgactactttagtttacatgttattgcgcaggtgaacgtttaagcccttgggtggccgttggatgtttt |
42223041 |
T |
|
| Q |
206 |
acaatgggcatatcaattctattcttctgaaccttactctgacttgaaatggttccattttcctttccattcttttcacttgattgatattcaatttgtt |
305 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42223042 |
acaatgggcgtatcaattctattcttctgaaccttactctgacttgaaatgtttccattttcctttccattcttttcac----ttgatattcaatttgtt |
42223137 |
T |
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| Q |
306 |
ggttattattctctgtgtaaggggctttttggaatgtaaattttttcccaccca |
359 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42223138 |
ggttattattctctgtgtaaggggctttttggaatgtaaattttttcccaccca |
42223191 |
T |
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