View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5062_high_15 (Length: 237)
Name: NF5062_high_15
Description: NF5062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5062_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 51196774 - 51196997
Alignment:
| Q |
1 |
ccagaaaaattctttgtatcgattatatgaacctgaaagaaaattgataaatgagttaataactatcctaattttcaacaagtgtaattaatttcaagaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51196774 |
ccagaaaaattctttgtatcgattatatgaacctgaaagaaaatcgataaatgagttaataactatcctaattttcaacaagtgtaattaatttcaagaa |
51196873 |
T |
|
| Q |
101 |
tacaaagctactcaacctacttgagatgtgttagtatcttcattgtgaacaaaagtaatgatccaaccatcatcttcttcgacacctccatctctaggca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
51196874 |
tacaaagctactcaacctacttgagatgtgttagtatcttcattgtgaacaaaagtaatgatcaaaccatcatcttcttcgacacctccatctctaggca |
51196973 |
T |
|
| Q |
201 |
caaacgctgccccattgcaaaatg |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
51196974 |
caaacgctgccccattgcaaaatg |
51196997 |
T |
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