View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5063-Insertion-10 (Length: 322)

Name: NF5063-Insertion-10
Description: NF5063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5063-Insertion-10
NF5063-Insertion-10
[»] chr3 (16 HSPs)
chr3 (32-322)||(23352066-23352356)
chr3 (32-322)||(23386401-23386691)
chr3 (32-322)||(23472569-23472859)
chr3 (32-322)||(23463406-23463696)
chr3 (32-322)||(23404775-23405065)
chr3 (32-322)||(23440034-23440330)
chr3 (32-322)||(23454184-23454474)
chr3 (54-214)||(23499215-23499375)
chr3 (77-214)||(23478759-23478896)
chr3 (54-214)||(23447436-23447607)
chr3 (86-214)||(23468710-23468838)
chr3 (260-322)||(23447647-23447709)
chr3 (260-322)||(23499415-23499477)
chr3 (254-311)||(23468872-23468929)
chr3 (260-322)||(23478936-23478998)
chr3 (245-314)||(23398277-23398345)
[»] scaffold0201 (1 HSPs)
scaffold0201 (32-322)||(11570-11860)
[»] chr4 (1 HSPs)
chr4 (159-214)||(12896666-12896721)
[»] chr2 (1 HSPs)
chr2 (171-209)||(42858166-42858204)
[»] chr1 (2 HSPs)
chr1 (181-209)||(21047408-21047436)
chr1 (181-209)||(21059737-21059765)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23352066 - 23352356
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  23352066 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatagatcagaaatttcttccgctttcca 23352165  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  ||| ||     
T  23352166 caaccgacttcgttttccagggtctttagattcttgattaacaatctcctgtcccatttcttgtaacaaatcatgcatttctaaaccatcagtttccgat 23352265  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     ||  ||   ||||||||| | ||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23352266 ttgaactgccagtgccaaaatagttgtagttgtatgagagctttatctagaaggacttcaatcccactttttgcaaagaactcacaagctt 23352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23386401 - 23386691
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    ||||||||||||||||||||| | ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  23386401 atattttataatcacatacatgtgttttcgtatagaaatgattgcatcctctgcttaccttgttttcttttaatatatcagatatttcttcagctctcca 23386500  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
     | |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||  |     
T  23386501 taaccgacttcgttttccaggttctttagactcttgattaacaatctcccgtcccatttcttgtaacaaatcatgcatatctaaaccatcaatttccaat 23386600  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     ||||     ||||||||  | |||||  |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23386601 ttggcaaacgagtgccaatatggttttatttgtatgaaagctttatctagaaggacttctatcccactttctgcaaagaactcacaagctt 23386691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23472569 - 23472859
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23472569 atattttataattacatacatatattttcatatataagtgattgcatcctctgcttaccttgttttcttttaatatatcagatatttctttagctctcca 23472668  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
    || |||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||||||| ||||||||| || | ||||| |||||||||  |     
T  23472669 caaccgacttcgttttccagggtttatagattcttgattaacaatctcctgtcccatttcttgtaacaaatcatgtatatgtaaactatcaacttccaac 23472768  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     |||| |   ||||||||  | |||||  |||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||    
T  23472769 ttggcatacgagtgccaatttggttttacttgtatgagagctttatctaaaacgacttctatcccactttctgcaaagaactcacaagctt 23472859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23463406 - 23463696
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23463406 atattttataatcacatacatgttttttcgtatagaaatgattgcattctctagttaccttgttttcttttaatatatcagatatttcttcagctctcca 23463505  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
     | |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||  |     
T  23463506 taaccgacttcgttttccaggatctttagactcttgattaacaatctcccgtcccatttcttgtaacaaatcatgcatatctaaaccatcagtttccaat 23463605  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     |||||    ||||||||  |  ||||  |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23463606 ttggccaacgagtgccaatttgattttatttgtatgaaagctttatctagaaggacttctatcccactttctgcaaagaactcacaagctt 23463696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23404775 - 23405065
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23404775 atattttataatcacatacatgttttttcgtatagaaatgattgcattctctagttaccttgttttcttttaatatatcagatatttcttcagctctcca 23404874  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
     | |||||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||   |     
T  23404875 taaccgacttcgttttccaggttctttagactcttgattaacaatctcccatcccatttcttgtaacaaatcatgcatatctaaaccatcaatttgcaat 23404974  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     |||||    || |||||  |  ||||  ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23404975 ttggccaacgagagccaatttgattttatttgtatgagagctttatctagaaggacttctatcccactttctgcaaagaactcacaagctt 23405065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23440034 - 23440330
Alignment:
Q  32 atattttataatcacatacatatattttcatataga------agtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagc 125  Q
    |||||||||||| ||||||||||||||||||||| |      |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  23440034 atattttataattacatacatatattttcatatatatatataagtgattgcatcctctgcttaccttgttttcttttaatatatcagatatttctttagc 23440133  T
Q  126 tttccacagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaact 225  Q
    | |||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  23440134 tctccacaaccgacttcgttttccagggtttatagattcttgattaacaatctcccgtcccatttcttgtaacaaatcatgcatatgtaaactatcaact 23440233  T
Q  226 tctgaagtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
    ||  |  |||| |   ||||||||  | |||||  |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||    
T  23440234 tcaaacttggcatacgagtgccaatttggttttacttgtatgagagctttatctaaaaggacttctatcccactttctgcaaagaacttacaagctt 23440330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 23454184 - 23454474
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    |||||| |||| |||| |||| | ||||||||| ||||| |||||||  ||||||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  23454184 atatttcataaccacaaacatgtgttttcatatggaagtaattgcattgtctacttaccttgttttttttcaatacatcagatatttcttcagcattcca 23454283  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
    ||  |||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| || ||     
T  23454284 caatcgacttcgttttccagggttcttagattcttgattaacaatctctcgtcccatttcttgtaacaaatcatgcatttctataccatcaacgtccgac 23454383  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
     || | | |   ||||| | || |||| |||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  23454384 ttgacataaacatgccatattttttttagttgtatgagagatttatctagaaggacttctatcccacttactgcaaagaactcacaagctt 23454474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 23499215 - 23499375
Alignment:
Q  54 tattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttccacagccgacttcgttttccaggg 153  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||| |||| |||| |||| ||||||||||||||||| |||||||||||||||||     
T  23499215 tattttcatgtagaagtgattgcatcctctacttaccttgttatttttcaatacatcaaatatctcttcagctttccacagtcgacttcgttttccagga 23499314  T
Q  154 tctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttcta 214  Q
    |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  23499315 tcttcagattcttgattaacaatctcccgtcccatttcttgtaacaaatcatgcatttcta 23499375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 23478759 - 23478896
Alignment:
Q  77 atcctctacttaccttgttttcttttaatatatcagatatttcttcagctttccacagccgacttcgttttccagggtctttagattctcgattaacaat 176  Q
    ||||||||||||| ||||| | |||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||    
T  23478759 atcctctacttactttgttatattttaatacatcggatatctcttcagctttccacagtcgacttcgttttccaggatcttcagattcttgattaacaat 23478858  T
Q  177 ctcccgtcccatttcttgtatcaaatcatgcatttcta 214  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23478859 ctcccgtcccatttcttgtaacaaatcatgcatttcta 23478896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 23447436 - 23447607
Alignment:
Q  54 tattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcaga-----------tatttcttcagctttccacagccgacttc 142  Q
    ||||||||| |||||||| ||||||||||||||||||||||| | ||| |||| ||||||           ||| || |||||||||||||| |||||||    
T  23447436 tattttcatgtagaagtgcttgcatcctctacttaccttgttatttttcaatacatcagaaatacatcagatatctcatcagctttccacagtcgacttc 23447535  T
Q  143 gttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttcta 214  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  23447536 gttttccagggtcttcagattcttgattaacaatttcccgtcccatttcttgtaacaaatcatgcatttcta 23447607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 23468710 - 23468838
Alignment:
Q  86 ttaccttgttttcttttaatatatcagatatttcttcagctttccacagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcc 185  Q
    |||||||||| | ||| ||||  |||||||||||||||||  ||||||  | ||||| ||| |||||||||||||||||| |||||||||||||||| ||    
T  23468710 ttaccttgttgtttttcaataattcagatatttcttcagccctccacaatctacttcttttcccagggtctttagattcttgattaacaatctcccgacc 23468809  T
Q  186 catttcttgtatcaaatcatgcatttcta 214  Q
    ||||||||||| |||| ||||||||||||    
T  23468810 catttcttgtaacaaaacatgcatttcta 23468838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 23447647 - 23447709
Alignment:
Q  260 gttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
    |||| |||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  23447647 gttgaatgagagccttatctagaaggacttctatcccacttattgcaaagaactcacaagctt 23447709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 23499415 - 23499477
Alignment:
Q  260 gttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
    |||| ||||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||    
T  23499415 gttgaatgagagctttatctagaaggacgtctatcccacttattgcaaagaactcagaagctt 23499477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 23468872 - 23468929
Alignment:
Q  254 gtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaa 311  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  23468872 gttttagttctatgagagctttatctagaaggacttctatcccaattgttgcaaagaa 23468929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 23478936 - 23478998
Alignment:
Q  260 gttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
    |||| ||||||||||||||||||||||| ||||||||| || |||||||||| ||| ||||||    
T  23478936 gttgaatgagagctttatctagaaggacgtctatcccacttattgcaaagaaatcagaagctt 23478998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 23398277 - 23398345
Alignment:
Q  245 gccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactc 314  Q
    ||||||||  |||| | |||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  23398277 gccaaactaattttagctgtatgagagcttt-tctagaaggacttctatcccacttattgcaaagaactc 23398345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 32 - 322
Target Start/End: Original strand, 11570 - 11860
Alignment:
Q  32 atattttataatcacatacatatattttcatatagaagtgattgcatcctctacttaccttgttttcttttaatatatcagatatttcttcagctttcca 131  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11570 atattatataatcagatacatatattatcatatagaagtgattgcaacctctacttaccttgttttcttttaacatatcagatatttcttcagctttcca 11669  T
Q  132 cagccgacttcgttttccagggtctttagattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttctaaaccatcaacttctgaa 231  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||  || ||||||||||||||| |||| ||||||||| ||     
T  11670 cagccgacttcgttttccagggtctttagattcttgattgacaatctcctgtcccatttctattaacaaatcatgcatttcaaaactatcaacttccgat 11769  T
Q  232 gtggcctcatagtgccaaacttgtttttgttgtatgagagctttatctagaaggacttctatcccagtttttgcaaagaactcacaagctt 322  Q
       ||     ||||||||| | ||||| |||||||||||||||||||||||||||||| || |||| || ||||| |||||||||||||||    
T  11770 cctgcacgccagtgccaaattggttttagttgtatgagagctttatctagaaggacttttaccccacttattgcatagaactcacaagctt 11860  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 12896721 - 12896666
Alignment:
Q  159 agattctcgattaacaatctcccgtcccatttcttgtatcaaatcatgcatttcta 214  Q
    ||||||| | ||||||||||| ||||||||||||  || |||||||||||||||||    
T  12896721 agattcttgcttaacaatctctcgtcccatttctactaacaaatcatgcatttcta 12896666  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 42858166 - 42858204
Alignment:
Q  171 aacaatctcccgtcccatttcttgtatcaaatcatgcat 209  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  42858166 aacaatctcccaacccatttcttgtatcaaatcatgcat 42858204  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 21047436 - 21047408
Alignment:
Q  181 cgtcccatttcttgtatcaaatcatgcat 209  Q
    |||||||||||||||||||||||||||||    
T  21047436 cgtcccatttcttgtatcaaatcatgcat 21047408  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 21059765 - 21059737
Alignment:
Q  181 cgtcccatttcttgtatcaaatcatgcat 209  Q
    |||||||||||||||||||||||||||||    
T  21059765 cgtcccatttcttgtatcaaatcatgcat 21059737  T

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