View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5063_high_35 (Length: 228)
Name: NF5063_high_35
Description: NF5063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5063_high_35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 228
Target Start/End: Complemental strand, 34062622 - 34062408
Alignment:
| Q |
14 |
aactatattgatacatgcatatctaaattattaaatcattggtaacattttattagccatgaaattgtaattcccaatctcaattggtcaaaacaatgaa |
113 |
Q |
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| T |
34062622 |
aactatattgatacatgcatatctaaattattaaatcattggtaacattttattaaccatgaaattgtaattcccaatctcaattggtcaaaacaatgaa |
34062523 |
T |
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| Q |
114 |
aaatatgaactctagaattctcctaaaccaaaattaccatgaaacaaaacaaccaaggtgactcgtgaacaccatagtcatcatgaattaaattgaacat |
213 |
Q |
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| T |
34062522 |
aaatatgaactctagaattctcctaaaccaaaattaccatgaaacaaaacaaccaaggtgacccgtgaacaccatagtcatcatgaattaaattgaacat |
34062423 |
T |
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| Q |
214 |
taatgaaactctaaa |
228 |
Q |
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||||||||||||||| |
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| T |
34062422 |
taatgaaactctaaa |
34062408 |
T |
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