View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5063_low_16 (Length: 316)
Name: NF5063_low_16
Description: NF5063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5063_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 32704262 - 32704542
Alignment:
| Q |
22 |
atcacatagcattggtgtgtattaataatatttgtatggacatccattgtttcttaattagtcgtaattgactcatcaggggtgacaacttctttgttgg |
121 |
Q |
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| T |
32704262 |
atcacatagcattggtgt--attaataatatttgtatggacatccattgtttcttaattagtcgtgattgactcatctggggtgacaacttctttgttgg |
32704359 |
T |
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| Q |
122 |
ggaatacttaggtatcagctgggaatgcctcgtctaaatcctttaacacctctcatgcgattaaatatccttcccaccttggtcatggaccttaacaatc |
221 |
Q |
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| T |
32704360 |
ggaatacttaggtatcagctgggaatgactcgtctaaatccttcaacacctc--atgcgattaaaaatccttcccaccttggtcatggaccttagcaatc |
32704457 |
T |
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| Q |
222 |
aacgacattgtttgttgtttctttaataagtaacacttcatttgttgcattcgttcatatgtcctagttatgcctatcgcctttg |
306 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32704458 |
aacgacattgtttgttgtttctttagtaagtaacacttcatttgttgcattcgttcatatgtcctagttatgcctatcgcctttg |
32704542 |
T |
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