View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5063_low_29 (Length: 245)
Name: NF5063_low_29
Description: NF5063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5063_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 45394623 - 45394856
Alignment:
| Q |
1 |
ccttaatttctcactttattaataactcactttagtggagccaaaccctttcaatacattatgtattattatctcaaaatcatgagcctcgccactttga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
45394623 |
ccttaatttctcactttattaataactcactttagtggagccaaaccctttcaatacattatgtattattatctcaaaatcatgagcctcaccactttga |
45394722 |
T |
|
| Q |
101 |
aaatgggttcaacatgatttagtaggatccatataaattttggctagtaatagacaatgtgttgctagtactctactaatatataagcaaaagaactttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
45394723 |
aaatgggttcaacatgatttagtaggatccatataaattttggctagtaatagacattgtgttgctagtactctactaatatataagcaaaagaactttc |
45394822 |
T |
|
| Q |
201 |
gaccaaactcataaagacgaacttgtaataatat |
234 |
Q |
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||| |||||||||||||||||||||||||||||| |
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| T |
45394823 |
gactaaactcataaagacgaacttgtaataatat |
45394856 |
T |
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