View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5064_low_1 (Length: 723)

Name: NF5064_low_1
Description: NF5064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5064_low_1
NF5064_low_1
[»] chr8 (14 HSPs)
chr8 (182-346)||(17683697-17683861)
chr8 (182-346)||(17664541-17664705)
chr8 (201-346)||(39837482-39837627)
chr8 (212-348)||(4839713-4839849)
chr8 (211-346)||(17973565-17973700)
chr8 (217-347)||(39845541-39845671)
chr8 (201-346)||(30938282-30938427)
chr8 (211-346)||(25579742-25579877)
chr8 (201-346)||(1406993-1407138)
chr8 (218-346)||(26873541-26873669)
chr8 (218-346)||(26875991-26876119)
chr8 (34-85)||(17664393-17664444)
chr8 (34-85)||(17683549-17683600)
chr8 (252-346)||(4582204-4582298)
[»] chr2 (24 HSPs)
chr2 (182-348)||(20372214-20372380)
chr2 (182-346)||(20621518-20621682)
chr2 (201-346)||(14582925-14583070)
chr2 (201-346)||(15944477-15944622)
chr2 (201-346)||(15952992-15953137)
chr2 (201-346)||(35138593-35138738)
chr2 (201-346)||(35146929-35147074)
chr2 (201-346)||(41233764-41233909)
chr2 (201-346)||(38168277-38168422)
chr2 (201-346)||(42565849-42565994)
chr2 (201-346)||(42574473-42574618)
chr2 (201-318)||(35037884-35038001)
chr2 (237-346)||(44372705-44372814)
chr2 (237-346)||(44388616-44388725)
chr2 (252-346)||(17687369-17687463)
chr2 (235-346)||(25483601-25483712)
chr2 (235-346)||(25491207-25491318)
chr2 (34-85)||(20621788-20621839)
chr2 (221-346)||(35303737-35303862)
chr2 (252-347)||(27606616-27606710)
chr2 (252-346)||(24285696-24285790)
chr2 (252-346)||(42249426-42249520)
chr2 (220-297)||(18989312-18989389)
chr2 (252-346)||(34070575-34070669)
[»] chr5 (21 HSPs)
chr5 (346-540)||(22042553-22042746)
chr5 (200-346)||(29186197-29186343)
chr5 (211-347)||(20398565-20398701)
chr5 (211-346)||(20372843-20372978)
chr5 (201-346)||(1728079-1728224)
chr5 (201-347)||(43597966-43598112)
chr5 (201-347)||(43603458-43603604)
chr5 (201-347)||(43608950-43609096)
chr5 (201-346)||(24956766-24956911)
chr5 (201-346)||(24965229-24965374)
chr5 (211-346)||(23350006-23350141)
chr5 (201-347)||(28843939-28844085)
chr5 (201-346)||(28852550-28852695)
chr5 (214-346)||(31410890-31411022)
chr5 (219-346)||(31421789-31421916)
chr5 (554-704)||(14110077-14110233)
chr5 (235-346)||(19223555-19223666)
chr5 (221-267)||(17638318-17638364)
chr5 (221-267)||(23028007-23028053)
chr5 (222-268)||(23037923-23037969)
chr5 (34-80)||(19223811-19223857)
[»] scaffold0156 (1 HSPs)
scaffold0156 (211-346)||(35286-35421)
[»] chr7 (12 HSPs)
chr7 (201-346)||(10439937-10440082)
chr7 (201-346)||(4952317-4952462)
chr7 (201-346)||(13831500-13831645)
chr7 (201-346)||(13839531-13839676)
chr7 (201-346)||(18304312-18304457)
chr7 (201-346)||(12978455-12978600)
chr7 (221-346)||(21662962-21663088)
chr7 (252-346)||(30244775-30244869)
chr7 (285-346)||(4941581-4941642)
chr7 (252-346)||(30255413-30255506)
chr7 (220-275)||(1955691-1955746)
chr7 (252-346)||(30245568-30245662)
[»] chr4 (14 HSPs)
chr4 (201-346)||(27343611-27343756)
chr4 (201-346)||(4523600-4523745)
chr4 (201-346)||(12996476-12996621)
chr4 (211-346)||(8094212-8094347)
chr4 (211-346)||(8103018-8103153)
chr4 (200-346)||(21532224-21532369)
chr4 (218-346)||(52295604-52295732)
chr4 (221-346)||(12428418-12428543)
chr4 (220-346)||(33188766-33188891)
chr4 (273-346)||(10638328-10638400)
chr4 (201-246)||(10638406-10638451)
chr4 (252-291)||(12402907-12402946)
chr4 (221-346)||(3424331-3424454)
chr4 (222-267)||(25249599-25249644)
[»] chr3 (23 HSPs)
chr3 (201-346)||(8154564-8154709)
chr3 (201-347)||(50824351-50824497)
chr3 (201-347)||(50851363-50851509)
chr3 (201-346)||(41006556-41006701)
chr3 (201-346)||(41015336-41015481)
chr3 (211-346)||(14538534-14538670)
chr3 (200-347)||(28470137-28470283)
chr3 (201-346)||(27341254-27341400)
chr3 (201-346)||(2211239-2211384)
chr3 (211-346)||(9525364-9525499)
chr3 (211-346)||(9555038-9555173)
chr3 (221-346)||(17933655-17933780)
chr3 (221-346)||(17919199-17919324)
chr3 (220-344)||(43470492-43470615)
chr3 (221-346)||(16816145-16816268)
chr3 (282-346)||(17628265-17628329)
chr3 (252-346)||(21186747-21186841)
chr3 (252-342)||(18349560-18349650)
chr3 (251-346)||(18039011-18039106)
chr3 (252-346)||(30447-30541)
chr3 (252-346)||(8197667-8197761)
chr3 (220-267)||(31276593-31276640)
chr3 (220-261)||(16288692-16288733)
[»] chr1 (14 HSPs)
chr1 (201-346)||(3432810-3432955)
chr1 (201-346)||(31539954-31540099)
chr1 (201-346)||(31548523-31548668)
chr1 (211-346)||(32137684-32137819)
chr1 (201-346)||(35103984-35104129)
chr1 (211-346)||(41746622-41746758)
chr1 (221-346)||(29221429-29221553)
chr1 (221-346)||(44320132-44320257)
chr1 (221-273)||(28457629-28457681)
chr1 (222-304)||(51058330-51058411)
chr1 (252-346)||(21498869-21498963)
chr1 (221-274)||(8241438-8241491)
chr1 (223-267)||(13462775-13462819)
chr1 (222-267)||(22460026-22460071)
[»] chr6 (17 HSPs)
chr6 (211-346)||(33298085-33298219)
chr6 (217-346)||(15391547-15391676)
chr6 (201-347)||(5004060-5004206)
chr6 (211-346)||(13825703-13825838)
chr6 (211-346)||(30824459-30824594)
chr6 (201-347)||(35091596-35091742)
chr6 (211-347)||(25550294-25550430)
chr6 (201-346)||(11279837-11279982)
chr6 (218-346)||(5994699-5994827)
chr6 (201-344)||(25991852-25991995)
chr6 (201-346)||(25506461-25506606)
chr6 (201-346)||(23925335-23925481)
chr6 (210-287)||(26526631-26526708)
chr6 (255-346)||(13490193-13490284)
chr6 (294-347)||(5489132-5489185)
chr6 (254-346)||(11053702-11053794)
chr6 (220-279)||(14894939-14894998)
[»] scaffold0111 (1 HSPs)
scaffold0111 (201-346)||(33035-33180)
[»] scaffold0209 (1 HSPs)
scaffold0209 (201-346)||(4-149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (218-346)||(15813-15941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (211-346)||(121228-121363)
[»] scaffold0497 (1 HSPs)
scaffold0497 (220-346)||(10993-11119)
[»] scaffold0632 (1 HSPs)
scaffold0632 (218-346)||(4390-4518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (211-346)||(23464-23600)
[»] scaffold0173 (1 HSPs)
scaffold0173 (211-346)||(859-994)
[»] scaffold0039 (1 HSPs)
scaffold0039 (235-346)||(40787-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (221-346)||(139-264)
[»] scaffold0170 (1 HSPs)
scaffold0170 (220-346)||(7129-7255)
[»] scaffold0222 (1 HSPs)
scaffold0222 (221-346)||(20422-20547)
[»] scaffold0027 (2 HSPs)
scaffold0027 (200-278)||(65622-65701)
scaffold0027 (34-74)||(65470-65510)
[»] scaffold0315 (1 HSPs)
scaffold0315 (220-276)||(10595-10651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (251-346)||(192528-192623)
[»] scaffold0290 (1 HSPs)
scaffold0290 (220-297)||(15760-15837)
[»] scaffold0991 (1 HSPs)
scaffold0991 (253-346)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (213-246)||(7587-7620)
scaffold0048 (274-347)||(7622-7695)
[»] scaffold0044 (2 HSPs)
scaffold0044 (253-346)||(81758-81851)
scaffold0044 (252-346)||(65509-65603)
[»] scaffold0007 (1 HSPs)
scaffold0007 (220-267)||(61371-61418)
[»] scaffold0863 (1 HSPs)
scaffold0863 (252-346)||(343-437)
[»] scaffold1380 (1 HSPs)
scaffold1380 (220-261)||(556-597)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 9e-69; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 17683697 - 17683861
Alignment:
Q  182 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 281  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  17683697 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgacgaaaattccc 17683796  T
Q  282 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17683797 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 17664541 - 17664705
Alignment:
Q  182 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 281  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  17664541 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgatgaaaattccc 17664640  T
Q  282 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17664641 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17664705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 39837482 - 39837627
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39837482 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 39837581  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  39837582 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 39837627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 212 - 348
Target Start/End: Original strand, 4839713 - 4839849
Alignment:
Q  212 cggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaag 311  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4839713 cggaatcaaaaatgaggtacttcaaagtaacttctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggtaag 4839812  T
Q  312 gatagagaaaagtggtcaaaatttgaggtatgacata 348  Q
     ||||||||||| |||||||||||| |||||||||||    
T  4839813 aatagagaaaagcggtcaaaatttggggtatgacata 4839849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 17973700 - 17973565
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  17973700 tcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 17973601  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  17973600 gaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 217 - 347
Target Start/End: Original strand, 39845541 - 39845671
Alignment:
Q  217 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 316  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||    
T  39845541 taaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 39845640  T
Q  317 agaaaagtggtcaaaatttgaggtatgacat 347  Q
    || ||||||||||||||||| ||||||||||    
T  39845641 aggaaagtggtcaaaatttggggtatgacat 39845671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 30938427 - 30938282
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938427 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 30938328  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  30938327 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 25579742 - 25579877
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  25579742 tcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 25579841  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | ||||| |||||||||||||||||  |||||||||    
T  25579842 gaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 1406993 - 1407138
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  1406993 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcacaactttaaaaatacgaata 1407092  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1407093 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 218 - 346
Target Start/End: Original strand, 26873541 - 26873669
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| || ||| |||||    
T  26873541 aaaaaataaggtactttaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaatttccgacattacaaatacgaataaaatgggtaagaataga 26873640  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||    
T  26873641 gaaaagtggtcaaaatttggggtatgaca 26873669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 218 - 346
Target Start/End: Original strand, 26875991 - 26876119
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||||| || ||| |||||    
T  26875991 aaaaaatgaggtattttaaagtaacctctttgtcgaaatttcgtctgaaacgacaaaaatttccgacattaaaaatacgaataaaatgggtaagaataga 26876090  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||    
T  26876091 gaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 17664393 - 17664444
Alignment:
Q  34 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 85  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17664393 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17664444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 17683549 - 17683600
Alignment:
Q  34 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 85  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17683549 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 4582298 - 4582204
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| ||| |||| | ||| |||  ||||||| || ||| |||||  | ||  ||||||||||||||||||||||| ||||||||||    
T  4582298 gaaatttcgtctaaaatgacggacatttccggttttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatgaca 4582204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 9e-66; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 182 - 348
Target Start/End: Original strand, 20372214 - 20372380
Alignment:
Q  182 gaaaataatgggaaagagaagggtctgattcggaataaaaaa-tgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcc 280  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  20372214 gaaaataatgggaaagagaagggtccgactcggaataaaaaaatgaggtacttcaaagtaacct-tttgtcgaaatttcgtctgaaacgacgaaaatttc 20372312  T
Q  281 cgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacata 348  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20372313 cgactttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgacata 20372380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 20621682 - 20621518
Alignment:
Q  182 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 281  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  20621682 gaaaataatgggaaagagaagggtctgactcagaataaaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaattccc 20621583  T
Q  282 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| ||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  20621582 gacttcaaaaacacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 14583070 - 14582925
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14583070 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 14582971  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  14582970 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 15944477 - 15944622
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944477 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15944576  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15944577 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15944622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 15952992 - 15953137
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15952992 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15953091  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15953092 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 35138738 - 35138593
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138738 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35138639  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35138638 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 35147074 - 35146929
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35147074 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35146975  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35146974 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 41233764 - 41233909
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233764 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41233863  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  41233864 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 41233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 38168277 - 38168422
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168277 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 38168376  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| ||||||||||||||||||||||||  ||||||||    
T  38168377 aaatgggtaagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 42565849 - 42565994
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42565849 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42565948  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42565949 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42565994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 42574473 - 42574618
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42574473 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42574572  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42574573 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 35038001 - 35037884
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35038001 agggcctgactcggaataaaaaatgaggtatttcaaagtaacctctctatcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35037902  T
Q  301 aaataggcaaggatagag 318  Q
    |||| || ||| ||||||    
T  35037901 aaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 44372814 - 44372705
Alignment:
Q  237 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 336  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44372814 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44372715  T
Q  337 aggtatgaca 346  Q
     |||||||||    
T  44372714 gggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 44388725 - 44388616
Alignment:
Q  237 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 336  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44388725 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44388626  T
Q  337 aggtatgaca 346  Q
     |||||||||    
T  44388625 gggtatgaca 44388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 17687369 - 17687463
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17687369 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 25483712 - 25483601
Alignment:
Q  235 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 334  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25483712 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25483613  T
Q  335 tgaggtatgaca 346  Q
    || |||||||||    
T  25483612 tggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 25491318 - 25491207
Alignment:
Q  235 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 334  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25491318 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25491219  T
Q  335 tgaggtatgaca 346  Q
    || |||||||||    
T  25491218 tggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 20621839 - 20621788
Alignment:
Q  34 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621839 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 20621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 35303862 - 35303737
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |||  | |||| |||||| ||||||||  || ||    ||||||    
T  35303862 aaatgaggtacttcaaattaacctctctgccgaaatttcgtctgaaacgacgaaatttcttggcttttaaaataagaataaaaggggtaaaatcagagaa 35303763  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    || | ||||||||||| |||||||||    
T  35303762 aaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 347
Target Start/End: Original strand, 27606616 - 27606710
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||||||||| |  ||  |||||||||||| |||||||||||  |||||||||    
T  27606616 gaaatttcgtctgagacgac-aaaattcccgtctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagtatgacat 27606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 24285790 - 24285696
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||||| ||||| ||   ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  24285790 gaaatttcgtcttaaacgacggaaatttccagttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 42249426 - 42249520
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||||| | |||  ||| ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  42249426 gaaatttcgtctaaaacgacggacattttcgattttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 18989312 - 18989389
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 297  Q
    |||||||||||||| |||||||||||| |   | ||||||||||||  |||| |||||||||| ||||||||| ||||    
T  18989312 aaaatgaggtacttgaaagtaacctctctaccgtaatttcgtctgatgcgacaaaaattcccggctttaaaaagacga 18989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 34070575 - 34070669
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  ||||||||||||| |||||||||| |||||||||    
T  34070575 gaaattttgtctaaaacgacggacattaccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatgaca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 346 - 540
Target Start/End: Complemental strand, 22042746 - 22042553
Alignment:
Q  346 ataactacatcatctttaactactctttccacttgaaatggctggatatcgtgatgtgcttaaaagacaagttctgggaggttttgaaactgtacatctt 445  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  22042746 ataactacatcatctttaacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaaattctaggaggttttgaaactgtacatctt 22042647  T
Q  446 ccatatcaggtattctatattttcagttttcctaactgctaattttattttgttttactactctgcagtgttgttatacttcttcaatgtgcaca 540  Q
    |||||||||||||||||||||||||| |||||||||||||  |    | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22042646 ccatatcaggtattctatattttcagctttcctaactgct-ctgcactgttgttatactactctgcactgttgttatacttcttcaatgtgcaca 22042553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 200 - 346
Target Start/End: Original strand, 29186197 - 29186343
Alignment:
Q  200 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 299  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29186197 aagggtccgactcggaataaaaaatgaggcacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 29186296  T
Q  300 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||    
T  29186297 aaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 20398565 - 20398701
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20398565 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20398664  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    | |||||||||||||||||||||||| ||||||||||    
T  20398665 gaatagagaaaagtggtcaaaatttggggtatgacat 20398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 20372843 - 20372978
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20372843 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20372942  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  20372943 gaatagagaaaagtggtcaaaatttggggtatgaca 20372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 1728079 - 1728224
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1728079 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 1728178  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1728179 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1728224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 43597966 - 43598112
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43597966 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43598065  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43598066 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 43603458 - 43603604
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43603458 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43603557  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43603558 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43603604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 43608950 - 43609096
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43608950 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43609049  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43609050 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43609096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 24956766 - 24956911
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956766 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24956865  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24956866 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24956911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 24965229 - 24965374
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965229 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24965328  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24965329 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24965374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 23350006 - 23350141
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||    
T  23350006 tcggaataaaaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaaatgacgagaattcccgactttaaaaatacgaataaaatgggtaa 23350105  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
      |||||||||| ||||||||||||| |||||||||    
T  23350106 aaatagagaaaaatggtcaaaatttggggtatgaca 23350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 28844085 - 28843939
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28844085 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28843986  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  28843985 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 28843939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 28852695 - 28852550
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28852695 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28852596  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  28852595 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 28852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 31411022 - 31410890
Alignment:
Q  214 gaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaagga 313  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||||| ||  || |    
T  31411022 gaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgttttaaacgacgaaaattcctaactttaaaaatacgaataaaatgggttagaa 31410923  T
Q  314 tagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||| |||||||||||||| |||||||||    
T  31410922 tagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 31421916 - 31421789
Alignment:
Q  219 aaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagag 318  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| || ||| ||||||    
T  31421916 aaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaatttccgacttcaaaaatacgaataaaatgggtaagaatagag 31421817  T
Q  319 aaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||||  |||||||||    
T  31421816 aaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 554 - 704
Target Start/End: Complemental strand, 14110233 - 14110077
Alignment:
Q  554 cacatgatgactagtatagaaaatggaagaggccaacacattgggaggtgctaaatacttccagtttgtcccactgtaaaacaaacaatacaatttagca 653  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||||  | |||||||||||||||||||| |||    
T  14110233 cacatgatgactagtatagaaaatggaagaggccaacacatt-ggaggtgctaaatagtcctagtttgtcccggtataaaacaaacaatacaatttggca 14110135  T
Q  654 atctaacacaata-------tatattttctctaacatcattttttggcataagttttt 704  Q
    ||| ||||| |||       |||||||||||||||  |||||||||||||||||||||    
T  14110134 atcgaacactatatattttctatattttctctaacggcattttttggcataagttttt 14110077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 19223666 - 19223555
Alignment:
Q  235 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 334  Q
    |||||||||||| ||| || ||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  19223666 aaagtaacctctctgtcgagatttcatctgaaacgacgacaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 19223567  T
Q  335 tgaggtatgaca 346  Q
    || |||||||||    
T  19223566 tggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 17638364 - 17638318
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||    
T  17638364 aaatgaggtacttcaaagtaacctctctgtcgaaatttcgtttgaaa 17638318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 23028007 - 23028053
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  23028007 aaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaa 23028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 23037969 - 23037923
Alignment:
Q  222 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaac 268  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  23037969 aatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaac 23037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 19223857 - 19223811
Alignment:
Q  34 gaaatttggaccactgccgaaaaccttcggacttattgacaacattg 80  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||||    
T  19223857 gaaatttggacccttgctgaaaactttcggacttattgacaacattg 19223811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 35286 - 35421
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  35286 tcggaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 35385  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  35386 gaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 10440082 - 10439937
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10440082 agggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 10439983  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||    
T  10439982 aaatgggcaagaatagagaaaagtggtcaaaatttggggtatgaca 10439937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 4952317 - 4952462
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4952317 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 4952416  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| ||||| ||||||||||||||||||||||||||||    
T  4952417 aaatgggtaagaatagataaaagtggtcaaaatttgaggtatgaca 4952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 13831645 - 13831500
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13831645 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13831546  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||  |||||||||    
T  13831545 aaatgggtaagaatagaggaaagtggtcaaaatttagggtatgaca 13831500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 13839676 - 13839531
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13839676 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13839577  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  13839576 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 13839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 18304312 - 18304457
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304312 agggtccgactcgaaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 18304411  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  18304412 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 12978600 - 12978455
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978600 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 12978501  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12978500 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 21662962 - 21663088
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt-aaaaatacgaataaaataggcaaggatagaga 319  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||| | || || |||| ||||||||||||||||| || ||  | ||| |    
T  21662962 aaatgaggtacttcaaagtaacctccctgttgaaatttcgtctaaaacgacgaagactctcggctttaaaaaatacgaataaaatgggtaaaaacagata 21663061  T
Q  320 aaagtggtcaaaatttgaggtatgaca 346  Q
    |||||| |||||||||| |||||||||    
T  21663062 aaagtgatcaaaatttggggtatgaca 21663088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 30244869 - 30244775
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||| || ||||||| ||||||||||| ||||||||||||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||    
T  30244869 gaaattacgactgaaacaacgaaaattcctgactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 4941581 - 4941642
Alignment:
Q  285 tttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 4941642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 30255506 - 30255413
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  30255506 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttg-ggtatgaca 30255413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 1955691 - 1955746
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaa 275  Q
    |||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||||    
T  1955691 aaaatgaggtgcttcaaagtaacctctctgccgaaattttgtctgaaacgacgaaa 1955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 30245662 - 30245568
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||| ||  |||||||||    
T  30245662 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggtatgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 2e-57; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 27343611 - 27343756
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27343611 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 27343710  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||  |||||||||||||||||||||||| |||||||||    
T  27343711 aaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 4523600 - 4523745
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4523600 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 4523699  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  4523700 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 12996621 - 12996476
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12996621 agggactgactcggaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 12996522  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12996521 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 8094212 - 8094347
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8094212 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8094311  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  8094312 gaatagagaaaagtggtcaaaatttggggtatgaca 8094347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 8103018 - 8103153
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8103018 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8103117  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  8103118 gaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 200 - 346
Target Start/End: Original strand, 21532224 - 21532369
Alignment:
Q  200 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 299  Q
    ||||||| || || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21532224 aagggtccgactcagaataaaaaatgaggtacttcaaagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaat 21532322  T
Q  300 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  21532323 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 52295732 - 52295604
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    |||||||||||||||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  52295732 aaaaaatgaggtacttcaaagtaatctctctgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 52295633  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||    
T  52295632 gaaaagtggtcaaaatttggggtatgaca 52295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 12428418 - 12428543
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  12428418 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 12428517  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  12428518 aagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 220 - 346
Target Start/End: Complemental strand, 33188891 - 33188766
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 319  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||| |  |||||||||||| |||||||  |  ||  ||||| |    
T  33188891 aaaatgaggtaattcaaagtaaccttcttgctgaaatttcgtctgaaacgacgaaaattctcagctttaaaaatacaaataaaaaggataaaaataga-a 33188793  T
Q  320 aaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| ||||||||||| |||||||||    
T  33188792 aaagttgtcaaaatttggggtatgaca 33188766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 10638400 - 10638328
Alignment:
Q  273 aaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||||| || ||  |||||||||||||||||||||||| |||||||||    
T  10638400 aaaattcccgactttaaaa-tacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 10638451 - 10638406
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctct 246  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  10638451 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctct 10638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 12402946 - 12402907
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaa 291  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12402946 gaaatttcgtctgaaacgacgaaaattcctgactttaaaa 12402907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 3424454 - 3424331
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| |||||||||  |||  | |||| ||| || ||||||||  || ||   |||||||    
T  3424454 aaatgaggtacttcaaagtaacctc--tgccgaaatttcgtctggaacgacgaactttcttggcttttaaagtaagaataaaaggggtaaaattagagaa 3424357  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    || || |||||||||| |||||||||    
T  3424356 aaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 25249599 - 25249644
Alignment:
Q  222 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||    
T  25249599 aatgaggtactccaaagtaacctccctgttgaaatttcgtttgaaa 25249644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 5e-55; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 8154564 - 8154709
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8154564 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 8154663  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  8154664 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 8154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 50824497 - 50824351
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50824497 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50824398  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50824397 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 50851363 - 50851509
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50851363 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50851462  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50851463 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 41006701 - 41006556
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41006701 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41006602  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41006601 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 41015481 - 41015336
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41015481 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41015382  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41015381 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41015336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 14538534 - 14538670
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 309  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  14538534 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 14538633  T
Q  310 aggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    || |||||||||||||||||||||||| |||||||||    
T  14538634 agaatagagaaaagtggtcaaaatttggggtatgaca 14538670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 200 - 347
Target Start/End: Original strand, 28470137 - 28470283
Alignment:
Q  200 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 299  Q
    ||||||| || || |||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  28470137 aagggtccgactcagaataaaaaatgaggtacttcatagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttctgactttaaaaatacgaat 28470235  T
Q  300 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    ||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  28470236 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgacat 28470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 27341254 - 27341400
Alignment:
Q  201 agggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 299  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27341254 agggcctgactcggaataaaaaaatgaggtacttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaat 27341353  T
Q  300 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| |  ||| |||||||||||||||||||||||| |||||||||    
T  27341354 aaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 27341400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 2211384 - 2211239
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||| |||| |||||||||||||||||||| || ||| || ||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  2211384 agggcctgactcggaataaaaaatgaggtattttaaaataccctctttgccgaaatttcgtcttaaacgacgaaaattcctgactttaaaaatacgaata 2211285  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||    
T  2211284 aaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 9525364 - 9525499
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||    
T  9525364 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgaataaaatgggtaa 9525463  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9525464 gaatagagaaaagtgatcaaaatttggggtatgaca 9525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 9555038 - 9555173
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| |||||||||||||||||||||||||||| |||||| || ||    
T  9555038 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgagtaaaatgggtaa 9555137  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9555138 gaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 17933780 - 17933655
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  17933780 aaatgaggtacttcaaagtaacctctccgaagaaatttcgtctgaaataacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 17933681  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    || ||||||||||||| |||||||||    
T  17933680 aattggtcaaaatttggggtatgaca 17933655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 17919324 - 17919199
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||||  |||||||||  || ||||||||||||||||||||| |  ||  ||||||||    
T  17919324 aaatgaggtactttaaagtaacctctccgacgaaatttcgtctgaaataacgaaaattttcggctttaaaaatacgaataaaatggataaaaatagagaa 17919225  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  17919224 aagtggtcaaaatttggggtatgaca 17919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 43470492 - 43470615
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 319  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||| || ||||||||||||||||||||  || ||  ||||| |    
T  43470492 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgaataaaattctcggctttaaaaatacgaataaaaagggtaaaaataga-a 43470590  T
Q  320 aaagtggtcaaaatttgaggtatga 344  Q
    ||||| ||||||||||| |||||||    
T  43470591 aaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 16816145 - 16816268
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    |||||||||||||||||||| |||||  ||  |||||||||||||||  ||||||||| ||| |||||||||||||||||||||  | ||  ||||||||    
T  16816145 aaatgaggtacttcaaagta-cctctccgtcaaaatttcgtctgaaataacgaaaatttccggctttaaaaatacgaataaaatgagtaaaaatagagaa 16816243  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  16816244 aagtggtcaaaatttg-ggtatgaca 16816268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  282 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 21186841 - 21186747
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||| |||||| |||||||||| || |||||||| |||||||||||| |  ||  | ||| |||||||||||||||||| |||||||||    
T  21186841 gaaatttcgtttgaaacaacgaaaattctcggctttaaaagtacgaataaaatggataaaaacagataaaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 18349650 - 18349560
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtat 342  Q
    |||||||||||| |||||||| | ||| |||| ||||||| ||||||||||||  | ||  |||||||||||| ||||||||||| |||||    
T  18349650 gaaatttcgtctaaaacgacggacatttccgattttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 18039106 - 18039011
Alignment:
Q  251 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||||| ||||   ||| || | || |||||||||||||||| || ||  |  ||||||||||||||||||||| |||||||||    
T  18039106 tgaaatttcgtctgaaacaacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 30447 - 30541
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||| || |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  30447 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 8197667 - 8197761
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  8197667 gaaattttgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 8197761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 31276640 - 31276593
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||    
T  31276640 aaaatgaggtacttcaaagtaaccttcttgtcgaaatttcgtttgaaa 31276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 16288733 - 16288692
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 261  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  16288733 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgt 16288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 5e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 3432810 - 3432955
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3432810 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 3432909  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  3432910 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 3432955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 31540099 - 31539954
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31540099 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31540000  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31539999 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 31548668 - 31548523
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548668 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31548569  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31548568 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 32137684 - 32137819
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  32137684 tcggaataaaaaatgaggtacttcaaagtaacttatttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggataa 32137783  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | ||||||||||||| |||||||||| |||| ||||    
T  32137784 gaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 35103984 - 35104129
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35103984 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccaactttaaaaatacgaata 35104083  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35104084 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 41746622 - 41746758
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 309  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  41746622 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 41746721  T
Q  310 aggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    || ||||| |||||||||||||||||| | |||||||    
T  41746722 agaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 29221429 - 29221553
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    |||||||||| |||||| || ||||| ||  ||||||||||||||||   |||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  29221429 aaatgaggtatttcaaaata-cctctctgccgaaatttcgtctgaaatagcgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 29221527  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||| ||||||||||| |||||||||    
T  29221528 aagtagtcaaaatttggggtatgaca 29221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 44320132 - 44320257
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    |||||||||||||  ||||||||||  || |||||||||||||||||||||||   ||| || | || |||||||||||||||| || ||  |  |||||    
T  44320132 aaatgaggtactttcaagtaacctccctgctgaaatttcgtctgaaacgacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaa 44320231  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  44320232 aagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 28457681 - 28457629
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacga 273  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28457681 aaatgatgtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacga 28457629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 51058330 - 51058411
Alignment:
Q  222 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaat 304  Q
    ||||||||| |||||| || ||| | || ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  51058330 aatgaggtatttcaaaata-cctttctgctgaaatttcgtttgaaacaacgaaaattcccagctttaaaaatacgaataaaat 51058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 21498869 - 21498963
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  21498869 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 8241438 - 8241491
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaa 274  Q
    ||||||||||||| |||||||||||| |   |||||||||||||||||||||||    
T  8241438 aaatgaggtactttaaagtaacctctctaccgaaatttcgtctgaaacgacgaa 8241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 13462819 - 13462775
Alignment:
Q  223 atgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    |||||||||||||||||||||||||| |  |||||||||||||||    
T  13462819 atgaggtacttcaaagtaacctctttatccaaatttcgtctgaaa 13462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 22460071 - 22460026
Alignment:
Q  222 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    ||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  22460071 aatgaggtactccaaagtaacctctctgtcgaaatttcgtttgaaa 22460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 7e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 33298219 - 33298085
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  33298219 tcggaataaaaaatgaggtacttcaaagtaac-tctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 33298121  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||||||||| ||| |||||||||    
T  33298120 ggatagagaaaagtggtcaaaagttggggtatgaca 33298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 15391547 - 15391676
Alignment:
Q  217 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 316  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  15391547 taaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcctggctttaaaaatacgaataaaatgggcaaggatag 15391646  T
Q  317 agaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||||||| | |||||||    
T  15391647 agaaaagtggtcaaaatttgggatatgaca 15391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 201 - 347
Target Start/End: Complemental strand, 5004206 - 5004060
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004206 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 5004107  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5004106 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 13825838 - 13825703
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  13825838 tcggaatcaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcctgactttaaaaatacgaataaaatgggtaa 13825739  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | ||||||||||||| |||||||||| |||||||||    
T  13825738 gaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 30824459 - 30824594
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  30824459 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 30824558  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  30824559 gaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 35091596 - 35091742
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35091596 agggtccgattcgaaataaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatatgaata 35091695  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  35091696 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 35091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 25550430 - 25550294
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||    
T  25550430 tcggaataaaaaatgaggtacttcaaagtaacctctctgccaaaatttcgtttgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaa 25550331  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    | |||||||||||||||||||||||| ||||||||||    
T  25550330 gaatagagaaaagtggtcaaaatttggggtatgacat 25550294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 11279982 - 11279837
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  11279982 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 11279883  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  11279882 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 5994827 - 5994699
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  5994827 aaaaaatgaggtacttcaaagtaacctctttgccaaaattttgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaataga 5994728  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||    
T  5994727 gaaaagtggtcaaaatttggggtatgaca 5994699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 25991995 - 25991852
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || || ||||||||||||||||||||||||||||||||| |   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25991995 agggtccgactctgaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcttctgaaacgacgaaaattcccgactttaaaaatacgaata 25991896  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatga 344  Q
    |||| || ||| |||||||||||||||||| ||||| |||||||    
T  25991895 aaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 25506461 - 25506606
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||| |||| ||||||| |||||||||||| || |||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25506461 agggcctgactcggaatcaaaaatgaggtattttaaagtaacctctctgccgaaatttcgtctaaaacgacgaaaattcccgactttaaaaatacgaata 25506560  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| ||||||||||||| |||||||||| |||||||||    
T  25506561 aaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 23925481 - 23925335
Alignment:
Q  201 agggtctgattcggaat-aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 299  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||| |   |||||||||||  ||| || ||||||||||||||||||||||||||||    
T  23925481 agggcctgactcggaatcaaaaaatgaggtacttcaaagtaacatctctaccgaaatttcgtcaaaaatgatgaaaattcccgactttaaaaatacgaat 23925382  T
Q  300 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||    
T  23925381 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 26526631 - 26526708
Alignment:
Q  210 ttcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt 287  Q
    |||||||  |||||||||||| |||||||||||| || ||  || |||||||||||||||||||||||||||||||||    
T  26526631 ttcggaaccaaaaatgaggtaattcaaagtaaccactctgccgatatttcgtctgaaacgacgaaaattcccgacttt 26526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 13490284 - 13490193
Alignment:
Q  255 atttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| ||||||||  |||||||||||||  |||| | ||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  13490284 attttgtctgaaataacgaaaattcccggttttacagatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgaca 13490193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 5489132 - 5489185
Alignment:
Q  294 acgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    ||||||||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5489185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 11053794 - 11053702
Alignment:
Q  254 aatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaata-ggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||  ||||||||||  |  ||||||||||||||||||||  || ||  ||||| |||||||||||||||||| |||||||||    
T  11053794 aatttcgtctgaaataacgaaaattctggt-tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgaca 11053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 14894998 - 14894939
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattc 279  Q
    ||||||||||||||||||||||  ||||||  ||||| ||||||||| |||| |||||||    
T  14894998 aaaatgaggtacttcaaagtaatttctttgccgaaatatcgtctgaagcgacaaaaattc 14894939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 346
Target Start/End: Complemental strand, 33180 - 33035
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33180 agggtccgactcggaataaaaaatgaggtactttaaagtaacctctttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgtata 33081  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  33080 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 346
Target Start/End: Original strand, 4 - 149
Alignment:
Q  201 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 300  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 103  T
Q  301 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  104 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 15941 - 15813
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  |||||    
T  15941 aaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaataga 15842  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||||| |||||||||    
T  15841 gaaaagtggtcaaaatttggggtatgaca 15813  T

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Target: scaffold0002 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 121363 - 121228
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| ||||||||  |||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  121363 tcggaatcaaaaatgatttacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 121264  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||||||||||||||||| |||||||||    
T  121263 gaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 220 - 346
Target Start/End: Complemental strand, 11119 - 10993
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 319  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||| || ||| |||||||    
T  11119 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaacaatacgaataaaatgggtaagaatagaga 11020  T
Q  320 aaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||| |||||||||    
T  11019 aaagtggtcaaaatttggggtatgaca 10993  T

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Target: scaffold0632 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 4518 - 4390
Alignment:
Q  218 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 317  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||| |||||    
T  4518 aaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgatgaaaattaccgactttaaaaatatgaataaaatgggtaagaataga 4419  T
Q  318 gaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||   ||||||||||| |||||||||    
T  4418 gaaaaaatgtcaaaatttggggtatgaca 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 23600 - 23464
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttta-aaaatacgaataaaataggca 309  Q
    ||||||| |||||||||||||||||||||||||||| |   ||||||||||| |||| || ||||||||||||||||| |||||||||||||||| || |    
T  23600 tcggaatcaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtcagaaatgatgaaaattcccgactttaaaaaatacgaataaaatgggta 23501  T
Q  310 aggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    || |||||||||||||||||||||||| |||||||||    
T  23500 agaatagagaaaagtggtcaaaatttggggtatgaca 23464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 859 - 994
Alignment:
Q  211 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 310  Q
    ||||||| |||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  859 tcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccagctttaaaaatacgaataaaatgggtaa 958  T
Q  311 ggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    | |||||||||  ||||||||||||| |||||||||    
T  959 gaatagagaaagctggtcaaaatttggggtatgaca 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 40787 - 40898
Alignment:
Q  235 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 334  Q
    |||||||||||||||| || |||||||||||||||| |||||| | |||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  40787 aaagtaacctctttgtcgagatttcgtctgaaacgatgaaaatgctcgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatt 40886  T
Q  335 tgaggtatgaca 346  Q
    || |||||||||    
T  40887 tggggtatgaca 40898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 264 - 139
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  264 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 165  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  164 aagtggtcaaaatttggggtatgaca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 220 - 346
Target Start/End: Original strand, 7129 - 7255
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 319  Q
    |||||||||||||||||||||||||   |   ||||||||||||||||| |||||||||| || |||||||| ||| |||||||| || ||  | |||||    
T  7129 aaaatgaggtacttcaaagtaaccttcctcccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacaaataaaatgggtaaaaacagaga 7228  T
Q  320 aaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||||||  |||||||||    
T  7229 aaagtggtcaaaatttagggtatgaca 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 20422 - 20547
Alignment:
Q  221 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 320  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||| || |||||||| |||||| |||||  | ||    | ||||    
T  20422 aaatgaggtactccaaagtaacctctctgccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacgaacaaaatgtgtaaaaccatagaa 20521  T
Q  321 aagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||||||| |||||||||    
T  20522 aagtggtcaaaatttggggtatgaca 20547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 65622 - 65701
Alignment:
Q  200 aagggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaatt 278  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  65622 aagggtccgactcggaataaaaaaatgaggtacttcaaagtaacatctttgtcgaaatttcgtccgaaacaacgaaaatt 65701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 65470 - 65510
Alignment:
Q  34 gaaatttggaccactgccgaaaaccttcggacttattgaca 74  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  65470 gaaatttggaccactgccgaaaactttcggactcattgaca 65510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 10595 - 10651
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaa 276  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  10595 aaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaagcgacgaaaa 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 192623 - 192528
Alignment:
Q  251 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  192623 tgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 192528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 15760 - 15837
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 297  Q
    ||||||||||||||||||||||||| | |   | ||||||||||||| ||||||||||||| | ||||||||| ||||    
T  15760 aaaatgaggtacttcaaagtaacctatctaccgtaatttcgtctgaagcgacgaaaattcctggctttaaaaagacga 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 345 - 438
Alignment:
Q  253 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  345 aaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 7587 - 7620
Alignment:
Q  213 ggaataaaaaatgaggtacttcaaagtaacctct 246  Q
    ||||||||||||||||||||||||||||||||||    
T  7587 ggaataaaaaatgaggtacttcaaagtaacctct 7620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 7622 - 7695
Alignment:
Q  274 aaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 347  Q
    ||||||| |||||||||||    || ||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  7622 aaattcctgactttaaaaaatgcaaaaaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 81758 - 81851
Alignment:
Q  253 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    ||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||  |||||||||    
T  81758 aaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatgaca 81851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 65509 - 65603
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||  ||||||||| |||||||||    
T  65509 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatgaca 65603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 61418 - 61371
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 267  Q
    ||||||||||||||||||||||||||| || |||||||| || |||||    
T  61418 aaaatgaggtacttcaaagtaacctctatgctgaaattttgtttgaaa 61371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 343 - 437
Alignment:
Q  252 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 346  Q
    |||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  343 gaaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1380 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 597 - 556
Alignment:
Q  220 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 261  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||    
T  597 aaaatgaggtactccaaagtaacctctctgtcgaaatttcgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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