View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5065-Insertion-10 (Length: 410)

Name: NF5065-Insertion-10
Description: NF5065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5065-Insertion-10
NF5065-Insertion-10
[»] chr2 (29 HSPs)
chr2 (8-410)||(17471432-17471836)
chr2 (171-251)||(10543744-10543825)
chr2 (171-251)||(9671225-9671304)
chr2 (171-251)||(10546209-10546288)
chr2 (207-251)||(34080182-34080226)
chr2 (171-254)||(44449390-44449473)
chr2 (171-251)||(14530364-14530445)
chr2 (171-251)||(8455326-8455405)
chr2 (207-249)||(14444809-14444851)
chr2 (205-250)||(3633719-3633764)
chr2 (182-251)||(21779271-21779339)
chr2 (207-251)||(23488564-23488608)
chr2 (208-252)||(24859997-24860041)
chr2 (207-247)||(34766336-34766376)
chr2 (171-251)||(36871538-36871616)
chr2 (207-251)||(40579759-40579803)
chr2 (207-251)||(41409943-41409987)
chr2 (207-250)||(5841111-5841154)
chr2 (176-247)||(17896311-17896381)
chr2 (176-251)||(44643574-44643648)
chr2 (213-251)||(124924-124962)
chr2 (207-249)||(8575976-8576018)
chr2 (210-252)||(11514519-11514561)
chr2 (207-249)||(14544147-14544189)
chr2 (213-251)||(22371199-22371237)
chr2 (207-248)||(24890492-24890533)
chr2 (207-251)||(25079727-25079771)
chr2 (171-251)||(25249748-25249827)
chr2 (176-252)||(26684629-26684704)
[»] chr4 (44 HSPs)
chr4 (171-251)||(20639668-20639748)
chr4 (124-250)||(54730249-54730376)
chr4 (171-248)||(30639425-30639501)
chr4 (171-251)||(54175109-54175190)
chr4 (171-251)||(11054158-11054237)
chr4 (176-248)||(20908649-20908721)
chr4 (182-251)||(23501844-23501914)
chr4 (171-251)||(16408611-16408692)
chr4 (171-251)||(20225120-20225201)
chr4 (172-252)||(10277766-10277845)
chr4 (171-251)||(20225028-20225107)
chr4 (176-248)||(21489138-21489210)
chr4 (176-251)||(21647015-21647091)
chr4 (171-251)||(29207908-29207987)
chr4 (207-251)||(32484314-32484358)
chr4 (207-251)||(38755918-38755962)
chr4 (207-251)||(40553947-40553991)
chr4 (207-251)||(44363140-44363184)
chr4 (208-251)||(50555666-50555709)
chr4 (181-250)||(30352591-30352661)
chr4 (207-249)||(30690188-30690230)
chr4 (176-254)||(51865045-51865122)
chr4 (171-248)||(5648304-5648380)
chr4 (120-251)||(6430636-6430764)
chr4 (120-251)||(47528540-47528667)
chr4 (207-251)||(11394933-11394977)
chr4 (207-251)||(11404660-11404704)
chr4 (207-251)||(25629130-25629174)
chr4 (207-247)||(33836501-33836541)
chr4 (211-251)||(35532077-35532117)
chr4 (207-251)||(38786690-38786734)
chr4 (176-252)||(40915879-40915954)
chr4 (124-244)||(16911562-16911682)
chr4 (148-247)||(20405110-20405210)
chr4 (207-245)||(14983915-14983953)
chr4 (120-251)||(9832323-9832450)
chr4 (182-251)||(39077806-39077874)
chr4 (171-248)||(47444003-47444079)
chr4 (120-251)||(48598835-48598962)
chr4 (207-247)||(8820589-8820629)
chr4 (207-251)||(25388257-25388301)
chr4 (185-245)||(30581481-30581541)
chr4 (207-251)||(35567251-35567295)
chr4 (207-247)||(47482864-47482904)
[»] chr8 (34 HSPs)
chr8 (176-251)||(20284079-20284155)
chr8 (176-251)||(21070707-21070783)
chr8 (176-251)||(39461004-39461080)
chr8 (171-249)||(2626568-2626645)
chr8 (171-251)||(7136537-7136618)
chr8 (120-251)||(12670260-12670387)
chr8 (171-251)||(16225065-16225146)
chr8 (171-251)||(12625936-12626015)
chr8 (207-251)||(16013537-16013581)
chr8 (171-251)||(44530195-44530274)
chr8 (171-249)||(29877140-29877217)
chr8 (171-249)||(36720842-36720919)
chr8 (120-251)||(13160698-13160826)
chr8 (171-251)||(20869969-20870050)
chr8 (182-251)||(35261736-35261804)
chr8 (171-251)||(17823622-17823701)
chr8 (207-247)||(18595919-18595959)
chr8 (207-251)||(26102598-26102642)
chr8 (207-251)||(27507991-27508035)
chr8 (207-247)||(28817640-28817680)
chr8 (207-251)||(30454107-30454151)
chr8 (171-251)||(45071310-45071389)
chr8 (181-251)||(25250578-25250649)
chr8 (212-251)||(27468102-27468141)
chr8 (207-249)||(8897776-8897818)
chr8 (213-251)||(18164770-18164808)
chr8 (171-251)||(6760868-6760949)
chr8 (207-251)||(2677621-2677665)
chr8 (205-237)||(20869524-20869556)
chr8 (148-248)||(26954156-26954257)
chr8 (207-251)||(28407484-28407528)
chr8 (171-251)||(29521695-29521774)
chr8 (171-247)||(30231344-30231420)
chr8 (171-251)||(44742528-44742608)
[»] chr7 (25 HSPs)
chr7 (177-257)||(21566487-21566567)
chr7 (118-251)||(21172019-21172148)
chr7 (120-251)||(32758257-32758384)
chr7 (171-251)||(42391110-42391189)
chr7 (120-163)||(1524282-1524325)
chr7 (176-251)||(7879689-7879763)
chr7 (176-251)||(48735132-48735206)
chr7 (120-251)||(11617598-11617727)
chr7 (171-251)||(38604572-38604652)
chr7 (171-251)||(42805570-42805651)
chr7 (208-249)||(45018935-45018976)
chr7 (171-251)||(47716505-47716586)
chr7 (207-251)||(2541029-2541073)
chr7 (176-248)||(10693086-10693157)
chr7 (176-251)||(29907470-29907543)
chr7 (207-251)||(35334826-35334870)
chr7 (210-249)||(42495874-42495913)
chr7 (181-251)||(27889326-27889395)
chr7 (171-249)||(33871922-33871999)
chr7 (198-252)||(38262205-38262259)
chr7 (207-248)||(18512466-18512507)
chr7 (171-200)||(35203485-35203514)
chr7 (182-251)||(35787279-35787347)
chr7 (207-251)||(18747568-18747612)
chr7 (207-251)||(31591119-31591163)
[»] chr6 (16 HSPs)
chr6 (120-251)||(12221924-12222056)
chr6 (120-251)||(29355865-29355996)
chr6 (171-251)||(26097204-26097283)
chr6 (120-251)||(1354767-1354894)
chr6 (171-251)||(1347008-1347087)
chr6 (171-251)||(25557769-25557848)
chr6 (171-248)||(7947384-7947461)
chr6 (207-251)||(6808476-6808520)
chr6 (207-251)||(12892090-12892134)
chr6 (207-251)||(14975100-14975144)
chr6 (207-250)||(23930138-23930181)
chr6 (209-251)||(10734915-10734957)
chr6 (171-251)||(2166420-2166501)
chr6 (171-251)||(2178053-2178134)
chr6 (207-251)||(11395842-11395886)
chr6 (207-251)||(12885994-12886038)
[»] chr3 (36 HSPs)
chr3 (120-251)||(13628800-13628931)
chr3 (120-251)||(1217108-1217235)
chr3 (171-251)||(40272822-40272901)
chr3 (120-249)||(54374357-54374485)
chr3 (176-251)||(54484764-54484838)
chr3 (118-250)||(6411833-6411962)
chr3 (171-251)||(353359-353440)
chr3 (182-251)||(829452-829521)
chr3 (120-251)||(39203534-39203661)
chr3 (120-251)||(516427-516559)
chr3 (171-251)||(34771374-34771453)
chr3 (171-248)||(29366733-29366811)
chr3 (120-248)||(34420656-34420783)
chr3 (171-251)||(46421044-46421126)
chr3 (115-251)||(53996575-53996710)
chr3 (171-251)||(13730612-13730693)
chr3 (171-251)||(14987025-14987106)
chr3 (171-251)||(45786224-45786305)
chr3 (171-251)||(49013483-49013564)
chr3 (207-251)||(10484626-10484670)
chr3 (171-251)||(15797288-15797367)
chr3 (171-251)||(22122927-22123006)
chr3 (171-251)||(22609833-22609912)
chr3 (207-251)||(24851311-24851355)
chr3 (207-251)||(30452898-30452942)
chr3 (171-251)||(31592915-31592994)
chr3 (207-251)||(45948848-45948892)
chr3 (171-249)||(10795435-10795514)
chr3 (176-251)||(52926229-52926303)
chr3 (209-251)||(5173729-5173771)
chr3 (123-251)||(12914045-12914171)
chr3 (181-251)||(25517180-25517249)
chr3 (213-251)||(47624208-47624246)
chr3 (120-251)||(26869725-26869853)
chr3 (185-249)||(25944551-25944615)
chr3 (171-251)||(55401244-55401324)
[»] chr5 (30 HSPs)
chr5 (171-251)||(38879627-38879708)
chr5 (171-251)||(8169994-8170073)
chr5 (171-251)||(43574652-43574731)
chr5 (207-252)||(25622541-25622586)
chr5 (120-251)||(32703420-32703547)
chr5 (207-251)||(16957395-16957439)
chr5 (182-249)||(7097772-7097838)
chr5 (207-250)||(12006339-12006382)
chr5 (176-251)||(24448941-24449015)
chr5 (120-251)||(43334198-43334329)
chr5 (171-251)||(4619114-4619195)
chr5 (172-249)||(12477132-12477209)
chr5 (182-251)||(12575670-12575739)
chr5 (171-251)||(13801777-13801858)
chr5 (210-258)||(13774949-13774997)
chr5 (207-251)||(16028634-16028678)
chr5 (171-251)||(16880657-16880736)
chr5 (171-251)||(34154824-34154903)
chr5 (171-251)||(41014364-41014443)
chr5 (187-242)||(10306493-10306548)
chr5 (207-250)||(21784343-21784386)
chr5 (120-252)||(27328748-27328880)
chr5 (185-248)||(39079764-39079827)
chr5 (198-251)||(10943855-10943907)
chr5 (207-248)||(19142956-19142997)
chr5 (210-251)||(32354211-32354252)
chr5 (207-251)||(7368477-7368521)
chr5 (176-251)||(20135655-20135731)
chr5 (207-251)||(30877574-30877618)
chr5 (207-251)||(39801597-39801641)
[»] chr1 (39 HSPs)
chr1 (120-251)||(46247963-46248092)
chr1 (171-251)||(4349707-4349786)
chr1 (120-251)||(18944662-18944794)
chr1 (120-251)||(35005142-35005273)
chr1 (185-258)||(19701653-19701726)
chr1 (207-252)||(27474384-27474429)
chr1 (171-252)||(35253196-35253276)
chr1 (207-251)||(4587573-4587617)
chr1 (171-250)||(30395737-30395817)
chr1 (207-251)||(50606507-50606551)
chr1 (176-254)||(2435793-2435871)
chr1 (182-251)||(10668305-10668375)
chr1 (181-251)||(45402175-45402244)
chr1 (171-248)||(12126850-12126926)
chr1 (210-251)||(14617145-14617186)
chr1 (171-251)||(18741967-18742048)
chr1 (182-251)||(23796545-23796613)
chr1 (205-254)||(25554749-25554798)
chr1 (171-247)||(27201716-27201793)
chr1 (120-251)||(34725108-34725235)
chr1 (120-251)||(38478292-38478419)
chr1 (171-248)||(41319819-41319895)
chr1 (207-252)||(42304216-42304261)
chr1 (171-251)||(10378745-10378824)
chr1 (171-251)||(19414506-19414585)
chr1 (176-251)||(20004100-20004176)
chr1 (171-251)||(31382224-31382303)
chr1 (207-251)||(46991908-46991952)
chr1 (207-250)||(6925204-6925247)
chr1 (171-250)||(15505633-15505710)
chr1 (207-258)||(33594134-33594185)
chr1 (209-251)||(9939570-9939612)
chr1 (182-248)||(19974087-19974153)
chr1 (120-252)||(23768329-23768459)
chr1 (171-251)||(35117775-35117857)
chr1 (182-251)||(31442399-31442468)
chr1 (188-249)||(45264411-45264472)
chr1 (207-251)||(30555219-30555263)
chr1 (182-258)||(47214589-47214664)
[»] scaffold1176 (1 HSPs)
scaffold1176 (171-249)||(1599-1676)
[»] scaffold0057 (3 HSPs)
scaffold0057 (182-251)||(46888-46956)
scaffold0057 (186-247)||(46721-46782)
scaffold0057 (207-247)||(24786-24826)
[»] scaffold0180 (1 HSPs)
scaffold0180 (176-252)||(24142-24217)
[»] scaffold0015 (1 HSPs)
scaffold0015 (171-251)||(48644-48723)
[»] scaffold0168 (1 HSPs)
scaffold0168 (181-251)||(30633-30702)
[»] scaffold0311 (1 HSPs)
scaffold0311 (207-248)||(10891-10932)
[»] scaffold0049 (1 HSPs)
scaffold0049 (171-247)||(59023-59100)
[»] scaffold0018 (1 HSPs)
scaffold0018 (208-249)||(72879-72920)
[»] scaffold0258 (1 HSPs)
scaffold0258 (207-251)||(13034-13078)


Alignment Details
Target: chr2 (Bit Score: 341; Significance: 0; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 8 - 410
Target Start/End: Original strand, 17471432 - 17471836
Alignment:
Q  8 catctatcgccattttgtcaagaatgtctagtagatgatcctgcaagtaatcaaatcaactgtcaagaaattgtcttaagattattttaataaattctat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17471432 catctatcgccattttgtcaagaatgtctagtagatgatcctgcaagtaatcaaatcaactgtcaagaaattgtcttaagattattttaataaattctat 17471531  T
Q  108 gaaattaatttaactgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgag 207  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||| |||    
T  17471532 gaaattaatttaactgaaatgtcacaggttcaagtctcagaaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatataccaaaatgatgag 17471631  T
Q  208 accccttcccggaccctgcctatgcgggagttttagtgcaccggactacccctatgaaagtactttaactttctttcatcttttattattaacagc--at 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  17471632 accccttccctgaccctgcctatgcgggagttttagtgcaccggactacccctatgaaattactttaactttctttcatcttttattattaacagcatat 17471731  T
Q  306 accatctataagtgcttaatacttacttggtaaagagcaagcaattcagaaatttgaaaggtgaatgaagcatagagaagctgaagcatgaaatcaacaa 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  17471732 accatctataagtgcttaatacttacttggtaaagagcaagcaattcagaaatttgaaaggtgaaggaagcatagagaagttgaagcatgaaatcaacaa 17471831  T
Q  406 ctggc 410  Q
    |||||    
T  17471832 ctggc 17471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 10543744 - 10543825
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  10543744 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 10543825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 9671225 - 9671304
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  9671225 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 9671304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 10546209 - 10546288
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  10546209 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 10546288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 34080182 - 34080226
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  34080182 gaccccttcccggaccctgcatatgcgggagttttagtgcaccgg 34080226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 44449473 - 44449390
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggact 254  Q
    ||||||||| |||||||||||| ||||||||   | |||||||||||||||||||| | || |||||||||| |||||| ||||    
T  44449473 caggataaggctgcgtacaatacaccaaaatagtgggaccccttcccggaccctgcgtttgtgggagttttaatgcacctgact 44449390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 14530364 - 14530445
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| || ||||||||| ||||| ||||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  14530364 cagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 14530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 8455405 - 8455326
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||| |||| |||||||||||||    
T  8455405 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgg 8455326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 14444809 - 14444851
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  14444809 gaccccttcccggaccctgcgtatgcgggagctttagtgcacc 14444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 3633764 - 3633719
Alignment:
Q  205 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||    
T  3633764 gagaccccttcccggaccccgcatatgcgggagctttagtgcaccg 3633719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 21779339 - 21779271
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  21779339 tgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 21779271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 23488564 - 23488608
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||    
T  23488564 gaccccttcccggaccctgcgtatgcgagagctttagtgcaccgg 23488608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 24860041 - 24859997
Alignment:
Q  208 accccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||    
T  24860041 accccttctcggaccctgcgtatgcgggagctttagtgcaccgga 24859997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 34766336 - 34766376
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  34766336 gaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 36871538 - 36871616
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||| ||| |||||||||| |||||||||||||    
T  36871538 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgg 36871616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 40579803 - 40579759
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  40579803 gaccccttcccggaccctgagtatgcgggagctttagtgcaccgg 40579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 41409943 - 41409987
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| || ||||||||||    
T  41409943 gaccccttcccggaccctgcatatgcgggagcttcagtgcaccgg 41409987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 5841111 - 5841154
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    ||||||||||||||||| || |||||||||| ||||||||||||    
T  5841111 gaccccttcccggaccccgcatatgcgggagctttagtgcaccg 5841154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 17896311 - 17896381
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||| |||||||||||||||| |||||  | ||||||||| |||||||||| |||| ||||| |||||||||    
T  17896311 taaggctgcgtacaatatacc-aaatggtgggaccccttctcggaccctgcgtatgtgggagctttagtgca 17896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 44643574 - 44643648
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||||||||||| ||||||| ||  | ||||||||||| |||||||| ||||||||||  ||||||||||||    
T  44643574 taaggctgcgtacaatgtaccaaa-tggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgg 44643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 124962 - 124924
Alignment:
Q  213 ttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 8575976 - 8576018
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||||||||||||||| |||| ||||| |||||||||||    
T  8575976 gaccccttcccggaccctgcgtatgtgggagctttagtgcacc 8576018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 11514519 - 11514561
Alignment:
Q  210 cccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||| |||||||| |||||||||| ||||||||||||||    
T  11514519 cccttcccagaccctgcgtatgcgggagctttagtgcaccgga 11514561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 14544147 - 14544189
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||||| ||||||||| |||||||||| |||||||||||    
T  14544147 gaccccttccgggaccctgcgtatgcgggagctttagtgcacc 14544189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 22371199 - 22371237
Alignment:
Q  213 ttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 22371237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 24890492 - 24890533
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||||||||||||||||||| ||||| |||| ||||||||||    
T  24890492 gaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 25079771 - 25079727
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||  ||| |||||||||||||    
T  25079771 gaccccttcccggaccctgcgtatgcaagagctttagtgcaccgg 25079727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 25249827 - 25249748
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | || ||||||||| ||||||| |||||| ||| |||||||||||||    
T  25249827 cagggtaaggctgcgtacaatacaccaaa-tggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgg 25249748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 26684704 - 26684629
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||| |||||||||||||| | |||||  | |||| ||||||| ||||||| |||||||||| |||| |||||||||    
T  26684704 taaggctgcgtacaatata-ctaaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccgga 26684629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 7e-19; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 20639748 - 20639668
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||||||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  20639748 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 20639668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 54730249 - 54730376
Alignment:
Q  124 aaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccggacc 222  Q
    |||||||||  |||||||||  | ||||||||||||||||        |||||||| ||||||| |||| ||||| ||||| |  |||||||||||||||    
T  54730249 aaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacaccaataatgatggaaccccttcccggacc 54730348  T
Q  223 ctgcctatgcgggagttttagtgcaccg 250  Q
    |||| |||||||||| ||||||||||||    
T  54730349 ctgcgtatgcgggagctttagtgcaccg 54730376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 30639425 - 30639501
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||| ||  |||||||||||||||||||||| |||||||||| ||||||||||    
T  30639425 cagggtaaggctgcgtacaatacaccaaa-tggtgagaccccttcccggaccctgcatatgcgggagctttagtgcac 30639501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 54175109 - 54175190
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttccc-ggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||||||  | ||||||||||| ||||||||| |||||||||| |||||||||||||    
T  54175109 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgg 54175190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 11054237 - 11054158
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||||||||||||||||| |||||| || ||  ||||||||||||||||||| |||||||||| | |||||||||||    
T  11054237 cagggtaagactgcgtacaatacaccaaa-tggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 11054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 20908721 - 20908649
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||||||||||| |||||||||  | |||||||||||| ||||||| |||||||||| ||||||||||    
T  20908721 taaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcac 20908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 23501844 - 23501914
Alignment:
Q  182 tgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| ||||| ||||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  23501844 tgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 23501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 16408692 - 16408611
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||||||||||||||||| ||||| ||||  |  |||||||||||||||| || |||||||||| |||||||||||||    
T  16408692 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 16408611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 20225120 - 20225201
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| |||||||||||||    
T  20225120 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 20225201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 10277845 - 10277766
Alignment:
Q  172 aggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||| |||||||||||| |||||| ||  || |||||||||| |||||||| |||||||||||| ||||| ||||||    
T  10277845 aggataaggctgcgtacaatacaccaaa-tggtgaaaccccttcccagaccctgcatatgcgggagttctagtgaaccgga 10277766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 20225028 - 20225107
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  20225028 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 20225107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 21489138 - 21489210
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    ||||||||||||||||  |||||||||  | |||||||||||| ||||||| |||||||||| ||| ||||||    
T  21489138 taagactgcgtacaatgcaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 21647015 - 21647091
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||||||||| ||||  | ||||||||||| ||||| || |||||||||| |||||||||||||    
T  21647015 taaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 21647091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 29207987 - 29207908
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  29207987 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 29207908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 32484314 - 32484358
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  32484314 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 32484358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 38755962 - 38755918
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  38755962 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 38755918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 40553991 - 40553947
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  40553991 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 40553947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 44363184 - 44363140
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  44363184 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 44363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 50555709 - 50555666
Alignment:
Q  208 accccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  50555709 accccttcccggaccctgcgtatgcaggagttttagtgcaccgg 50555666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 30352661 - 30352591
Alignment:
Q  181 ctgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    |||||||||||| ||||||| ||  | ||||||||| |||||||||| |||||||||| ||||||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 30352591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 30690230 - 30690188
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  30690230 gaccccttcccggaccctgcgtatgcgggagctttagtgcacc 30690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 51865122 - 51865045
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggact 254  Q
    |||| |||||||||||| |||||| ||  | | |||||||||||||||||| |||||||||| |||| |||||||||||    
T  51865122 taaggctgcgtacaatacaccaaa-tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggact 51865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 5648304 - 5648380
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| || |||||||    
T  5648304 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcac 5648380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 6430764 - 6430636
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||| ||||||||    
T  6430764 actgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa--cagggtaaggctgcgtacaatacaccaaa-tggtgggaccacttcccgg 6430668  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| ||||| |||||||    
T  6430667 accctgcgtatgcgggagctttagcgcaccgg 6430636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 47528667 - 47528540
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  47528667 actgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 47528572  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||  |||| ||||| | |||||||||||    
T  47528571 accctgaatatgtgggagctctagtgcaccgg 47528540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 11394933 - 11394977
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||    
T  11394933 gacccctttccggaccctgcgtatgcgggagctttagtgcaccgg 11394977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 11404660 - 11404704
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||    
T  11404660 gacccctttccggaccctgcgtatgcgggagctttagtgcaccgg 11404704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 25629130 - 25629174
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||| | |||||||||| |||||||||||||    
T  25629130 gaccccttcccggaccctacatatgcgggagctttagtgcaccgg 25629174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 33836541 - 33836501
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  33836541 gaccccttcccggaccctgcgtatgcgggagctttagtgca 33836501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 35532077 - 35532117
Alignment:
Q  211 ccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgg 35532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 38786690 - 38786734
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  38786690 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 38786734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 40915879 - 40915954
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||| |||||||||||| |||||| ||  | || ||||||||||||||||| |||||||||| || |||||||||||    
T  40915879 taaggctgcgtacaatacaccaaa-tggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccgga 40915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 16911562 - 16911682
Alignment:
Q  124 aaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccggacc 222  Q
    |||||||||  |||||||||  | ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||    
T  16911562 aaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaat-cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacc 16911660  T
Q  223 ctgcctatgcgggagttttagt 244  Q
    |||| || ||||||| ||||||    
T  16911661 ctgcgtacgcgggagctttagt 16911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 20405110 - 20405210
Alignment:
Q  148 aaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgc 246  Q
    ||||||||||||||||       |||| ||||| ||||||||||| || || ||||  | ||||||||||||||||| || |||||||||| ||||||||    
T  20405110 aaacagcctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgc 20405209  T
Q  247 a 247  Q
    |    
T  20405210 a 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 14983915 - 14983953
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtg 245  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  14983915 gaccccttcccggaccctgcgtatgcgggagctttagtg 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 9832450 - 9832323
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  9832450 actgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 9832355  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| ||||| |||  | |||||||||||    
T  9832354 accctgcatatgcaggaactctagtgcaccgg 9832323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 39077874 - 39077806
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||| ||  |||||  ||| ||||||||||| |||||||||| | |||||||||||    
T  39077874 tgcgtacaatataccaaa-tggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccgg 39077806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 47444003 - 47444079
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||| |||| || |||||||    
T  47444003 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcaggagcttcagtgcac 47444079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 48598962 - 48598835
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  48598962 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 48598867  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||| ||| ||||| |||| | |||||||||||    
T  48598866 accatgcatatgccggagctctagtgcaccgg 48598835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 8820589 - 8820629
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    ||||||||||| |||||||| |||||| |||||||||||||    
T  8820589 gaccccttcccagaccctgcgtatgcgagagttttagtgca 8820629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 25388257 - 25388301
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||  ||| |||||||||||||    
T  25388257 gaccccttcccggaccctgcgtatgcatgagctttagtgcaccgg 25388301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 30581541 - 30581481
Alignment:
Q  185 gtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtg 245  Q
    |||||||| |||||||||  | |||||||||||||||||||| ||||  |||| |||||||    
T  30581541 gtacaatacaccaaaatggtgggaccccttcccggaccctgcatatgtaggagctttagtg 30581481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 35567251 - 35567295
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| ||||||| | |||||||| |||||||||||||    
T  35567251 gaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgg 35567295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 47482904 - 47482864
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||||| |||||||||| ||| |||||    
T  47482904 gaccccttcccggaccctgcgtatgcgggagctttggtgca 47482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 20284155 - 20284079
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  20284155 taaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgg 20284079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 21070783 - 21070707
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  21070783 taaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgg 21070707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 39461080 - 39461004
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| ||||| ||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  39461080 taaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 39461004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 2626568 - 2626645
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||| ||||||||||||||||| |||||| ||| | ||||||||||| |||||||| |||||||||| || ||||||||    
T  2626568 cagggtaagactgcgtacaatacaccaaa-tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcacc 2626645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 7136618 - 7136537
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| |||||||||||||    
T  7136618 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 7136537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 12670387 - 12670260
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  12670387 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 12670292  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  12670291 accctgcatatgcgggagctctagtgcaccgg 12670260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 16225065 - 16225146
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||||||||||||||||| ||||| ||||  | || |||||||||||||| || |||||||||| |||||||||||||    
T  16225065 cagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgg 16225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 12625936 - 12626015
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||||||||| ||||||| |||||| ||  | |||||| ||||||||||||| |||||||||| |||||||||||||    
T  12625936 cagggtaagactgcatacaatacaccaaa-tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgg 12626015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 16013537 - 16013581
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  16013537 gaccccttcccagaccctgcctatgcgggagctttagtgcaccgg 16013581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 44530195 - 44530274
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||| ||||||||| |||||||||| |||||||||||||    
T  44530195 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 44530274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 29877140 - 29877217
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||||||||  ||||||||||    
T  29877140 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcacc 29877217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 36720842 - 36720919
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||||| || |||||||||||    
T  36720842 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacc 36720919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 13160698 - 13160826
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||| ||||||||  |||||||||  | ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  13160698 actgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa--cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 13160794  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| || ||||| ||||    
T  13160795 accctgcgtatgcgggagcttcagtgcgccgg 13160826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 20869969 - 20870050
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | |||||||||| |||||| || |||||||||| |||||||||||||    
T  20869969 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgg 20870050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 35261736 - 35261804
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| ||  | |||||||||| ||||||||| |||||||||| |||||||||||||    
T  35261736 tgcgtacaatacaccaaa-tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 35261804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 17823622 - 17823701
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||| |||| ||||||  |  || ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  17823622 caggataagactgcgtaaaatacaccaaatggtgga-accccttcccgaaccctgcatatgcaggagctttagtgcaccgg 17823701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 18595919 - 18595959
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  18595919 gaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 26102598 - 26102642
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  26102598 gaccccttcccggaccctgcttatgcgggagctctagtgcaccgg 26102642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 27507991 - 27508035
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||    
T  27507991 gaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgg 27508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 28817680 - 28817640
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  28817680 gaccccttcccggaccctgcgtatgcgggagctttagtgca 28817640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 30454151 - 30454107
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  30454151 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30454107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 45071310 - 45071389
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||| ||| |||||||||| || ||||||||||    
T  45071310 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgg 45071389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 25250578 - 25250649
Alignment:
Q  181 ctgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| ||||| ||||  | |||||||||||| |||| || |||||||||| |||||||||||||    
T  25250578 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgg 25250649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 27468141 - 27468102
Alignment:
Q  212 cttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgg 27468102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 8897818 - 8897776
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  8897818 gaccccttcccggaccctgcatatgcgggagctttactgcacc 8897776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 18164808 - 18164770
Alignment:
Q  213 ttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 18164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 6760868 - 6760949
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| || ||||||||| ||||| ||||  | ||||||||| ||||||| || |||||||||| |||||||||||||    
T  6760868 cagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgg 6760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 2677621 - 2677665
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||    
T  2677621 gaccccttctcggaccctgcgtatgcggatgttttagtgcaccgg 2677665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 20869556 - 20869524
Alignment:
Q  205 gagaccccttcccggaccctgcctatgcgggag 237  Q
    |||||||||||||||||||||| ||||||||||    
T  20869556 gagaccccttcccggaccctgcatatgcgggag 20869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 26954156 - 26954257
Alignment:
Q  148 aaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgc 246  Q
    ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||| ||||  || |||||||||| ||||||||    
T  26954156 aaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgc 26954255  T
Q  247 ac 248  Q
    ||    
T  26954256 ac 26954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 28407484 - 28407528
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||| | |||||||||| |||| ||||||||    
T  28407484 gaccccttcccggaccctacgtatgcgggagctttactgcaccgg 28407528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 29521774 - 29521695
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | || ||| |||| |||||||| |||||||||| |||||||||||||    
T  29521774 cagggtaaggctgcgtacaatacaccaaa-tggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccgg 29521695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 30231420 - 30231344
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    ||||||||| ||||||||||||||||||||||  | ||||| | |||| ||||| | || | ||||| |||||||||    
T  30231420 caggataaggctgcgtacaatataccaaaatggtgggacccttacccgaaccctccatacgtgggagctttagtgca 30231344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 44742608 - 44742528
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||||||  | |||||||||  ||||||| |  |||||||||  ||||||||||||    
T  44742608 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccgg 44742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 21566487 - 21566567
Alignment:
Q  177 aagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggactacc 257  Q
    |||||||||||||||| |||||||||    |||||||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  21566487 aagactgcgtacaatacaccaaaatggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccgggctacc 21566567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 251
Target Start/End: Complemental strand, 21172148 - 21172019
Alignment:
Q  118 taactgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttccc 217  Q
    |||||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||    
T  21172148 taactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttccc 21172053  T
Q  218 ggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||| |||||||||| | |||||||||||    
T  21172052 ggaccctgcatatgcgggagctctagtgcaccgg 21172019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 32758257 - 32758384
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| |||||||||    ||||||||||||||||       |||| |||| ||| |||||||| |||||| ||  | |||||||||||||    
T  32758257 actgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgtgtacaatacaccaaa-tggtgggaccccttcccgg 32758352  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  32758353 accctgcatatgcgggagctctagtgcaccgg 32758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 42391189 - 42391110
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  42391189 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 42391110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 1524325 - 1524282
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgt 163  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  1524325 actgaaaggtcacaagttcaagtcttataaacagcctcttgtgt 1524282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 7879689 - 7879763
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| || ||||||||||    
T  7879689 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgg 7879763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 48735206 - 48735132
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  48735206 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 48735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 11617727 - 11617598
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| |||||||||    ||||| ||||||||||       |||| ||||||||||||||||| |||||| ||  | |||||||||| ||    
T  11617727 actgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaa-cagggtaagactgcgtacaatacaccaaa-tggtgggaccccttcctgg 11617630  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| ||||| |||  |||||||||||||    
T  11617629 accctgcgtatgcaggacctttagtgcaccgg 11617598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 38604572 - 38604652
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggag-ttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  |||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  38604572 cagggtaaggctgcgtacaatacaccaaa-tggtgagacccctttccggaccctgcgtatgcgggagctttaagtgcaccgg 38604652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 42805570 - 42805651
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| ||| |||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| |||||||||||||    
T  42805570 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 42805651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 45018976 - 45018935
Alignment:
Q  208 accccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  45018976 accccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 47716505 - 47716586
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| ||| |||||||||    
T  47716505 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgg 47716586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2541073 - 2541029
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||    
T  2541073 gaccccttcccggtccctgcgtatgcgggagctttagtgcaccgg 2541029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 10693157 - 10693086
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||    
T  10693157 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 10693086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 29907470 - 29907543
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||| ||||| |||||||||  | |||||| ||||||||||||  |||||||||| |||||||||||||    
T  29907470 taaggctgcgttcaatacaccaaaatggtgggaccccatcccggaccctg--tatgcgggagctttagtgcaccgg 29907543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 35334870 - 35334826
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||    
T  35334870 gaccccttcccggaccctgcgtatgcaggagctttagtgcaccgg 35334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  210 cccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 27889395 - 27889326
Alignment:
Q  181 ctgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| ||| || ||||||    
T  27889395 ctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgg 27889326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 33871999 - 33871922
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||| |||||||||||| |||||| ||  | ||||||||||| |||||||  |||||| ||| |||||||||||    
T  33871999 caggataaggctgcgtacaatacaccaaa-tggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacc 33871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 38262259 - 38262205
Alignment:
Q  198 aaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||| | |||||||||||| || |||| |||||||||| ||||||||||||||    
T  38262259 aaatgatgggaccccttcccgaacactgcgtatgcgggagctttagtgcaccgga 38262205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 18512507 - 18512466
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||||||||||||||||||| |||||||||| ||| ||||||    
T  18512507 gaccccttcccggaccctgcgtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 35203485 - 35203514
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa 200  Q
    ||||||||||||||||||||||||||||||    
T  35203485 caggataagactgcgtacaatataccaaaa 35203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 35787347 - 35787279
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| || || |||||||||||||||| ||| |||||||||| || | ||||||||    
T  35787347 tgcgtacaatacaccaaa-tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 18747568 - 18747612
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||| | ||||||| |||||||||| |||||||||||||    
T  18747568 gaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgg 18747612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 31591163 - 31591119
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||| ||| |||||||||| | |||||||||||    
T  31591163 gaccccttcccggaccttgcatatgcgggagctctagtgcaccgg 31591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 12222056 - 12221924
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccg 218  Q
    |||||||||||||  ||||||||||   ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||    
T  12222056 actgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa-cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 12221958  T
Q  219 gaccctgcctatgcgggag-ttttagtgcaccgg 251  Q
    |||||||| |||||||||| ||||||||||||||    
T  12221957 gaccctgcgtatgcgggagcttttagtgcaccgg 12221924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 29355996 - 29355865
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccg 218  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||    
T  29355996 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaa-cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 29355898  T
Q  219 gaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||| |||||||||| |||||||||||||    
T  29355897 gaccctgcgtatgcgggagctttagtgcaccgg 29355865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 26097204 - 26097283
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||| | |||||||||||||||||||| |||||||||| | |||||||||||    
T  26097204 cagggtaaggctgcgtacaatacaccaaa-tgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 26097283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 1354894 - 1354767
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  1354894 actgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 1354799  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  1354798 accctgcatatgcgggagctctagtgcaccgg 1354767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 1347008 - 1347087
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  1347008 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 1347087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 25557769 - 25557848
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||| |  ||||||||||||||||||| |||||||||| | |||||||||||    
T  25557769 cagggtaaggctgcgtacaatacaccaaa-tgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 25557848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 7947461 - 7947384
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||||||  | | |||||||||||||| ||| |||| ||||| ||||||||||    
T  7947461 cagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcac 7947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 6808476 - 6808520
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  6808476 gaccccttcccggaccctgtgtatgcgggagctttagtgcaccgg 6808520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 12892090 - 12892134
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  12892090 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 12892134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 14975144 - 14975100
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| |||| || ||||||||||||||||||||||||    
T  14975144 gaccccttcccgaaccccgcatatgcgggagttttagtgcaccgg 14975100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 23930181 - 23930138
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  23930181 gaccccttcacggaccctgcttatgcgggagctttagtgcaccg 23930138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 10734957 - 10734915
Alignment:
Q  209 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  10734957 ccccttcccggaccctgcgtatgcgggagctttagtccaccgg 10734915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 2166501 - 2166420
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||  ||||||||||| ||||| ||||  | ||||||||||||||||||   ||| |||||| |||||||||||||    
T  2166501 caggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgg 2166420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 2178134 - 2178053
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||  ||||||||||| ||||| ||||  | ||||||||||||||||||   ||| |||||| |||||||||||||    
T  2178134 caggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgg 2178053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 11395842 - 11395886
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| ||||| |||||||||| |||||| ||||||    
T  11395842 gaccccttcccggatcctgcgtatgcgggagctttagtccaccgg 11395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 12885994 - 12886038
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||||| |||| ||||| |||||||||||||    
T  12885994 gaccccttcccagaccctgcgtatgtgggagctttagtgcaccgg 12886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 13628931 - 13628800
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccg 218  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||    
T  13628931 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaa-cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 13628833  T
Q  219 gaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||| |||||||||| |||||||||||||    
T  13628832 gaccctgcgtatgcgggagctttagtgcaccgg 13628800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 1217108 - 1217235
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| || || |||||||||||||    
T  1217108 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggcgggaccccttcccgg 1217203  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  1217204 accctgcatatgcgggagctctagtgcaccgg 1217235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 40272901 - 40272822
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  40272901 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 40272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 54374485 - 54374357
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| ||||||||||   ||||| ||||||||||        ||| |||| |||||||||||  |||||||||  | |||||||||||||    
T  54374485 actgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaat-agggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccgg 54374387  T
Q  220 accctgcctatgcgggagttttagtgcacc 249  Q
    ||||||| |||||||||| |||||| ||||    
T  54374386 accctgcatatgcgggagctttagttcacc 54374357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 54484764 - 54484838
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  54484764 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 54484838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 250
Target Start/End: Complemental strand, 6411962 - 6411833
Alignment:
Q  118 taactgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttccc 217  Q
    ||||||| ||||||   ||||||||||  |||||||||||||||||       |||| |||| |||||||||||| |||||| ||| | |||||||||||    
T  6411962 taactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa--cagggtaaggctgcgtacaatacaccaaa-tgatgggaccccttccc 6411866  T
Q  218 ggaccctgcctatgcgggagttttagtgcaccg 250  Q
     |||| ||| |||||||||| ||||||||||||    
T  6411865 agaccttgcgtatgcgggagctttagtgcaccg 6411833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 353440 - 353359
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| |||||||||||||    
T  353440 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 353359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 829521 - 829452
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||||||  | |||||||||||| ||||||| ||||| |||| |||||||||||||    
T  829521 tgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccgg 829452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 39203534 - 39203661
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| |||||||||    ||||||||||||||||       |||| ||||  ||||||||||| |||||| ||  | |||||||||||||    
T  39203534 actgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa---cagggtaaggttgcgtacaatacaccaaa-tggtgggaccccttcccgg 39203629  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||| ||| |||||||||| |||||||||||||    
T  39203630 accttgcatatgcgggagctttagtgcaccgg 39203661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 516427 - 516559
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaa--tgacgagaccccttccc 217  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| ||||| |||||| |||||||  || || |||||||||||    
T  516427 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa-cagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccc 516525  T
Q  218 ggaccctgcctatgcgggagttttagtgcaccgg 251  Q
     |||||||| |||||||||| |||||||||||||    
T  516526 cgaccctgcgtatgcgggagctttagtgcaccgg 516559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 34771453 - 34771374
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  34771453 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 34771374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 29366811 - 29366733
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| ||||| ||||  | |||||||||||||||||||| |||| ||||| ||||||||||    
T  29366811 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcac 29366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 34420783 - 34420656
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||| ||| |||||||||  | |||||||||||||    
T  34420783 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa-cagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccgg 34420685  T
Q  220 accctgcctatgcgggagttttagtgcac 248  Q
    ||| ||| |||| ||||| ||||||||||    
T  34420684 accttgcgtatgtgggagctttagtgcac 34420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 46421126 - 46421044
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggag-ttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | |||||||||||||||||||| |||||||||| ||| ||||||||||    
T  46421126 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccgg 46421044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 251
Target Start/End: Complemental strand, 53996710 - 53996575
Alignment:
Q  115 atttaactgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagacccctt 214  Q
    |||| ||||||||||||| ||||||||||    ||||| ||||||||||       |||| |||| |||| ||||||| |||||||||  | ||||||||    
T  53996710 atttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaa-cagggtaaggctgcttacaatacaccaaaatggtgggacccctt 53996612  T
Q  215 cccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||| ||| |||| |||| ||||| |||||||||||||    
T  53996611 ccctgacactgcgtatgtgggagctttagtgcaccgg 53996575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 13730693 - 13730612
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| ||| |||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| |||||||||||||    
T  13730693 cagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgg 13730612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 14987025 - 14987106
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||| |||||||||| ||| |||||||||| |||||||||||||    
T  14987025 cagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagtgcaccgg 14987106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 45786305 - 45786224
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||||| ||  | ||||||||||||||||||||  |||| |||| |||||||||||||    
T  45786305 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgg 45786224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 49013564 - 49013483
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || || ||||||| |||||||||||||    
T  49013564 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgg 49013483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 10484670 - 10484626
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||    
T  10484670 gaccccttcctggaccctgcgtatgcgggagctttagtgcaccgg 10484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 15797288 - 15797367
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||| ||||| | |||||||||||    
T  15797288 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 15797367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 22123006 - 22122927
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||| ||| | |||||||||||    
T  22123006 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgg 22122927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 22609833 - 22609912
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||| ||| |||||||||| || ||||||||||    
T  22609833 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgg 22609912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 24851355 - 24851311
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||    
T  24851355 gaccccttcccggatcctgcatatgcgggagctttagtgcaccgg 24851311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 30452898 - 30452942
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  30452898 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30452942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 31592915 - 31592994
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | ||| |||||||||||||||| |||||||||| | |||||||||||    
T  31592915 cagggtaaggctgcgtacaatacaccaaa-tggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgg 31592994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 45948892 - 45948848
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||    
T  45948892 gaccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 45948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 10795514 - 10795435
Alignment:
Q  171 caggataagactgcgtacaatatacc-aaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||| |||| |||||||||||| ||| ||||||  | |||||||||| ||||||||| |||||||||| || ||||||||    
T  10795514 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcacc 10795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 52926303 - 52926229
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||||| ||  | ||| |||||||||||||||| |||||||||| ||||| |||||||    
T  52926303 taaggctgcgtacaatacaccaaa-tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgg 52926229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 5173771 - 5173729
Alignment:
Q  209 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| ||| |||||||||| |||||||||||||    
T  5173771 ccccttcccggaccttgcgtatgcgggagctttagtgcaccgg 5173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 251
Target Start/End: Complemental strand, 12914171 - 12914045
Alignment:
Q  123 gaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccggacc 222  Q
    ||||||||||| |||||||||    ||||||||||||||||       |||| |||| | |||||||||| |||||| ||  ||||||||||||| ||||    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaa-cagggtaaggcggcgtacaatacaccaaa-tggtgagaccccttcccagacc 12914074  T
Q  223 ctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||| || | ||||||||    
T  12914073 ctgcatatgcgggagcttcaatgcaccgg 12914045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 25517249 - 25517180
Alignment:
Q  181 ctgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| || ||||||  | |||||||||||||| ||||| ||||| |||| |||||||||||||    
T  25517249 ctgcgtacaatacac-aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgg 25517180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 47624208 - 47624246
Alignment:
Q  213 ttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgg 47624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 26869725 - 26869853
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||| |||||||||    ||||||||||| ||||       |||| |||| |||||||||||| ||| |||||  | |||||||| ||||    
T  26869725 actgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaa--cagggtaaggctgcgtacaatacacc-aaatggtgggaccccttgccgg 26869821  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||| ||| |||||||||| ||| |||||||||    
T  26869822 accatgcgtatgcgggagctttggtgcaccgg 26869853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 25944551 - 25944615
Alignment:
Q  185 gtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||| |||||||||  | ||||||||||| |||||||| |||| ||||| ||||| |||||    
T  25944551 gtacaatacaccaaaatggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcacc 25944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 55401244 - 55401324
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||| |||||||||  | ||||||||| |||||| | | |||||||||| |||  ||||||||    
T  55401244 caggttaagactgcgtataatacaccaaaatggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgg 55401324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 38879627 - 38879708
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  38879627 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 38879708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 8170073 - 8169994
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  8170073 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgg 8169994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 43574652 - 43574731
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| ||||||||||||||||||| ||  | |||||||||||||||||||| |||||||||| ||||| |||||||    
T  43574652 cagggtaaggctgcgtacaatataccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccgg 43574731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 25622541 - 25622586
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  25622541 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgga 25622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 32703420 - 32703547
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| |||||| ||  | |||||||||||||    
T  32703420 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgg 32703515  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  32703516 accctgcatatgcgggagctctagtgcaccgg 32703547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 16957395 - 16957439
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  16957395 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 16957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 7097838 - 7097772
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||||| |||||| ||  |||||||||||||| ||||||| |||||||||| |||||||||||    
T  7097838 tgcgtacaatacaccaaa-tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 7097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 12006382 - 12006339
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  12006382 gaccccttcccagaccctgcctatgcgggagctttagtgcaccg 12006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 24448941 - 24449015
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||| |||| |||||||||||||    
T  24448941 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgg 24449015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 43334198 - 43334329
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaa-tgacgagaccccttcccg 218  Q
    |||||||||||||  |||||||||    |||||||||| |||||       |||| |||| |||||||||||| ||||||| ||  | ||||||||||||    
T  43334198 actgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccg 43334297  T
Q  219 gaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| | ||||||||| |||||||||||||    
T  43334298 gaccctg-cgatgcgggagctttagtgcaccgg 43334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 4619195 - 4619114
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||| ||| |||||||||||||    
T  4619195 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgg 4619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 12477209 - 12477132
Alignment:
Q  172 aggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    |||||||| |||||||||||| |||||||||  | ||||||||||||||  |||| |||||  ||| |||||||||||    
T  12477209 aggataaggctgcgtacaatacaccaaaatggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacc 12477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 12575739 - 12575670
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||||||  | |||||||||| ||||||||| ||||| |||| ||| |||||||||    
T  12575739 tgcgtacaatacaccaaaatggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgg 12575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 13801858 - 13801777
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||| ||| |||||||||||||    
T  13801858 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgg 13801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 13774949 - 13774997
Alignment:
Q  210 cccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 258  Q
    ||||| ||||||||||| |||||||||| ||||||||||||| ||||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccc 13774997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 16028678 - 16028634
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| | |||||||||||    
T  16028678 gaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 16028634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 16880736 - 16880657
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||| ||||||||||| ||| |||||||||| |||||||||||||    
T  16880736 cagggtaaggctgcgtacaatacaccaaa-tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccgg 16880657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 34154903 - 34154824
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| ||||||| || | |||||||||||    
T  34154903 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgg 34154824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 41014364 - 41014443
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||| |||||| || |||||||||| |||||||||||||    
T  41014364 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgg 41014443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 10306548 - 10306493
Alignment:
Q  187 acaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagtttta 242  Q
    |||||| |||||||||  | |||||||||||||||||||| |||||||||| ||||    
T  10306548 acaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 21784386 - 21784343
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  21784386 gacccctttccggaccctgcgtatgcgggaggtttagtgcaccg 21784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 27328748 - 27328880
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccg 218  Q
    |||||||||||||| |||||||||    |||||| |||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||    
T  27328748 actgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaa-cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 27328846  T
Q  219 gaccctgcctatgcgggagttttagtgcaccgga 252  Q
     ||||||| |||||||||| |||| |||| ||||    
T  27328847 aaccctgcgtatgcgggagctttaatgcatcgga 27328880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 39079827 - 39079764
Alignment:
Q  185 gtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||||||| |||||||||  | |||||||||||||||| ||  ||| |||||||||||||||||    
T  39079827 gtacaatacaccaaaatggtgggaccccttcccggaccatgtgtatacgggagttttagtgcac 39079764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 10943907 - 10943855
Alignment:
Q  198 aaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| ||| ||||||||||||||||||| | ||||||||| |||||||||||||    
T  10943907 aaataacgggaccccttcccggaccctg-caatgcgggagctttagtgcaccgg 10943855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 19142997 - 19142956
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||||||||||||||| ||| |||||||||| ||||||||||    
T  19142997 gaccccttcccggaccatgcgtatgcgggagatttagtgcac 19142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 32354211 - 32354252
Alignment:
Q  210 cccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||  |||||||||| |||||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgg 32354252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 7368477 - 7368521
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||    
T  7368477 gaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 7368521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 20135655 - 20135731
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || ||||| |||| || ||||||||||    
T  20135655 taaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgg 20135731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 30877618 - 30877574
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||    
T  30877618 gaccccttcccggaccctgcatatgtgggagctctagtgcaccgg 30877574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 39801597 - 39801641
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| | |||||||||| |||||||||||||    
T  39801597 gaccccttcccagaccctacgtatgcgggagctttagtgcaccgg 39801641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 46248092 - 46247963
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    ||||||| |||||  ||||||||||   ||||||||||||||||       |||| ||||||||||||||||| |||||| ||  | |||||||||||||    
T  46248092 actgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacaccaaa-tggtgggaccccttcccgg 46247995  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| ||||||| |||||    
T  46247994 accctgcgtatgcgggagctttagtgtaccgg 46247963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 4349707 - 4349786
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  4349707 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 4349786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 18944662 - 18944794
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaa-aatgacgagaccccttcccg 218  Q
    |||||||||||||| ||||||| |    ||||||||||||||||       |||| |||| |||||||||||| ||||| ||||  | ||||||||||||    
T  18944662 actgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaa-cagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccg 18944760  T
Q  219 gaccctgcctatgcgggag-ttttagtgcaccgg 251  Q
    |||||||| |||||||||| ||||||||||||||    
T  18944761 gaccctgcgtatgcgggagcttttagtgcaccgg 18944794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 35005142 - 35005273
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaa-tgacgagaccccttcccg 218  Q
    |||||||||||||  ||||||||||   ||||||||||||||||       |||| |||| |||| ||||||| ||||||| ||  | ||||||||||||    
T  35005142 actgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccg 35005240  T
Q  219 gaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||| |||||||| | |||||||||||||    
T  35005241 gaccctgcgtatgcgggcgctttagtgcaccgg 35005273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 19701653 - 19701726
Alignment:
Q  185 gtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 258  Q
    |||||||| |||||||||  | | |||||||||||||||||| |||||||||| ||||||||||| | ||||||    
T  19701653 gtacaatacaccaaaatggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccc 19701726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 27474384 - 27474429
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  27474384 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgga 27474429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 35253276 - 35253196
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||||||    
T  35253276 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgga 35253196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 4587617 - 4587573
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  4587617 gaccccttcccggaccctgcctatgcgggagcttcagtgcaccgg 4587573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 30395817 - 30395737
Alignment:
Q  171 caggataagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||||| || |||||||||| ||||||||||||    
T  30395817 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 30395737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 50606507 - 50606551
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  50606507 gaccccttcccggaccctgcatatgcgggagctttagtgcaccgg 50606551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 2435871 - 2435793
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggact 254  Q
    |||| |||||||||||| |||||||||  | |||||||| ||| ||||| |  ||||||||| ||||||||||||||||    
T  2435871 taagcctgcgtacaatacaccaaaatggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccggact 2435793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 10668305 - 10668375
Alignment:
Q  182 tgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| ||||| ||||  | ||||||||||||| |||||| |||||||||| |||||||||||||    
T  10668305 tgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgg 10668375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 45402175 - 45402244
Alignment:
Q  181 ctgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| |||||| ||  | ||||||||||| |||||||| |||||||||| |||||||||||||    
T  45402175 ctgcgtacaatacaccaaa-tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgg 45402244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 12126926 - 12126850
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||    
T  12126926 cagggtaaggctgcgtacaatacaccaaattgtgg-gaccccttcccggaccctgcatatgcgggagctgtagtgcac 12126850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 14617145 - 14617186
Alignment:
Q  210 cccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  14617145 cccttcccggaccctgcatatgcgggagctttagtgcaccgg 14617186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 18742048 - 18741967
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| ||||||| ||  | ||||||||||| |||||||| |||||| ||| |||||||||||||    
T  18742048 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgg 18741967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 23796545 - 23796613
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| ||  ||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  23796545 tgcgtacaatacaccaaa-tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgg 23796613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 25554798 - 25554749
Alignment:
Q  205 gagaccccttcccggaccctgcctatgcgggagttttagtgcaccggact 254  Q
    |||||||||||||| ||||||| ||||||||||  |||||||||||||||    
T  25554798 gagaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggact 25554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 27201716 - 27201793
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||| |||| |||||||||||| ||||||| ||  | |||||||||||||||| ||| |||||||||| |||||||||    
T  27201716 cagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 34725235 - 34725108
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||    ||||||||||||||||       |||| |||| |||||||||||| || ||| ||  | |||||||||||||    
T  34725235 actgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacactaaa-tggtgggaccccttcccgg 34725140  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  34725139 accctgcatatgcgggagctctagtgcaccgg 34725108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 38478419 - 38478292
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||||||||||||  |||||||||  | ||||||||||||||||       |||| |||| |||||||||||| ||||||  |  || |||||||| |||    
T  38478419 actgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa---cagggtaaggctgcgtacaatacaccaaatggtgga-accccttctcgg 38478324  T
Q  220 accctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| | |||||||||||    
T  38478323 accctgcatatgcgggagctctagtgcaccgg 38478292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 41319895 - 41319819
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||| |||| |||||||||||| |||||| ||| | |||||||||||| ||||| | ||||||||||||| |||||||    
T  41319895 cagggtaaggctgcgtacaatacaccaaa-tgatgggaccccttcccgaacccttcatatgcgggagtttcagtgcac 41319819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 42304261 - 42304216
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  42304261 gaccccttcccggaccctgcgtatgtgggagctttagtgcaccgga 42304216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 10378824 - 10378745
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||  ||||||||| |||||||||| |||||||||||||    
T  10378824 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgg 10378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 19414506 - 19414585
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||| ||||||| |||||||||| | |||||||||||    
T  19414506 caggttaaggctgcgtacaatacaccaaa-tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgg 19414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 20004176 - 20004100
Alignment:
Q  176 taagactgcgtacaatataccaa-aatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||||||||||| ||||| ||||  | ||||||||||| ||||| || |||||||||| |||||||||||||    
T  20004176 taaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 20004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 31382303 - 31382224
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||| |||||||||||| ||| |||||  | |||||||||| ||||||||| |||||||||| |||| || |||||    
T  31382303 caggataaggctgcgtacaatacacc-aaatggtgggaccccttcctggaccctgcatatgcgggagctttactgtaccgg 31382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 46991908 - 46991952
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||    
T  46991908 gaccccttcccggaccctgcgtatgtgggagctttagtgcaccgg 46991952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 6925204 - 6925247
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||    
T  6925204 gaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 6925247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 15505633 - 15505710
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccg 250  Q
    |||| ||||||||||||||||| |||||| ||  | |||||||||||| ||||||| |||||||||| ||| ||||||||    
T  15505633 cagggtaagactgcgtacaatacaccaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccg 15505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 33594185 - 33594134
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 258  Q
    ||||||||||| |||||||| |||||||||| |||||||||| || ||||||    
T  33594185 gaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccc 33594134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 9939570 - 9939612
Alignment:
Q  209 ccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||| |||||||||| |||||||||| |||||||||||||    
T  9939570 ccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 9939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 19974153 - 19974087
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    ||||||||||| |||||||||| | ||||| ||||||||| ||   |||||||||| ||||||||||    
T  19974153 tgcgtacaatacaccaaaatgatgggacccattcccggactctatgtatgcgggagctttagtgcac 19974087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 23768459 - 23768329
Alignment:
Q  120 actgaaaggtcacatgttcaagtctcataaacagcctcttgtgtnnnnnnncaggataagactgcgtacaatataccaaaatgacgagaccccttcccgg 219  Q
    |||| ||||||||| |||||||||    ||||||||||||||||       |||| |||| |||||||||||| ||| |||||  | ||| ||||||| |    
T  23768459 actgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaa-cagggtaaggctgcgtacaatacacc-aaatggtgggacaccttcccag 23768362  T
Q  220 accctgcctatgcgggagttttagtgcaccgga 252  Q
    ||||||| |||||||||| ||||||||| ||||    
T  23768361 accctgcgtatgcgggagctttagtgcagcgga 23768329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 35117857 - 35117775
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcct-atgcgggagttttagtgcaccgg 251  Q
    |||| |||| ||| |||||||| ||||||| ||| | |||||||||||||||||||| | |||| |||| |||||||||||||    
T  35117857 cagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgg 35117775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 31442468 - 31442399
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||||||  | ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  31442468 tgcgtacaatacaccaaaatggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccgg 31442399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 45264472 - 45264411
Alignment:
Q  188 caatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||| |||||||||  | ||||||||| | |||||||| |||||||||| |||||||||||    
T  45264472 caatacaccaaaatggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 30555219 - 30555263
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||| |||||||||| |||||| ||| |||||||||||||    
T  30555219 gaccccttcacggaccctgcgtatgcgagagctttagtgcaccgg 30555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 47214589 - 47214664
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccggactaccc 258  Q
    ||||||||||| |||||| ||  | ||||||||||| |||||||| |||||||||| | ||||||||| || |||||    
T  47214589 tgcgtacaatacaccaaa-tggtgggaccccttcccagaccctgcatatgcgggagctctagtgcaccagattaccc 47214664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 1676 - 1599
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||| |||| ||||||| |||||| ||| | ||||||||||||||||| || |||||||||| |||||||||||    
T  1676 caggataaggctgcatacaatacaccaaa-tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 46888 - 46956
Alignment:
Q  182 tgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| |||||||||||||    
T  46888 tgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgg 46956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 46782 - 46721
Alignment:
Q  186 tacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||||||||  | ||||||||||| |||||||| |||||||||| |||| ||||    
T  46782 tacaatataccaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttaatgca 46721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 24826 - 24786
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||||||||||| ||||||| |||||||||| |||||||||    
T  24826 gaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 24217 - 24142
Alignment:
Q  176 taagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgga 252  Q
    |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||||||    
T  24217 taaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgga 24142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 48723 - 48644
Alignment:
Q  171 caggataagactgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||| |||| |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  48723 cagggtaaggctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 48644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 30633 - 30702
Alignment:
Q  181 ctgcgtacaatataccaaaatgacgagaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    |||||||||||| |||||| ||  | |||||||||||||||||||| |||||||||| | |||||||||||    
T  30633 ctgcgtacaatacaccaaa-tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgg 30702  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 10891 - 10932
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcac 248  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  10891 gaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 59023 - 59100
Alignment:
Q  171 caggataagactgcgtacaatataccaaaa-tgacgagaccccttcccggaccctgcctatgcgggagttttagtgca 247  Q
    |||| ||||||||||||||||| ||||||| ||  | ||||||||||| ||| |||| |||||||||| |||||||||    
T  59023 cagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagctttagtgca 59100  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 72920 - 72879
Alignment:
Q  208 accccttcccggaccctgcctatgcgggagttttagtgcacc 249  Q
    ||||||||||||| ||||| |||||||||| |||||||||||    
T  72920 accccttcccggaacctgcgtatgcgggagctttagtgcacc 72879  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 13078 - 13034
Alignment:
Q  207 gaccccttcccggaccctgcctatgcgggagttttagtgcaccgg 251  Q
    ||||||||||| |||||||| |||||||| | |||||||||||||    
T  13078 gaccccttcccagaccctgcgtatgcgggggctttagtgcaccgg 13034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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