View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5065-Insertion-12 (Length: 132)
Name: NF5065-Insertion-12
Description: NF5065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5065-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 111; Significance: 2e-56; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 47189361 - 47189484
Alignment:
| Q |
7 |
atttacaaattctttgtactagccaacatgaaaatggtcacccatatagaccaaaaaaccagggcagagacaacaggtagttcaatcagctcttatcaac |
106 |
Q |
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| T |
47189361 |
atttacaaattctttgtactagccaacatgaaaatggtcacccata--gaccaaaaaaccagggcagaaacaacaggtagttcaatcagctcttatcaac |
47189458 |
T |
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| Q |
107 |
ctagtcaactcatattctatatatag |
132 |
Q |
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| T |
47189459 |
ctagtcaactcatattctatatatag |
47189484 |
T |
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