View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5065_high_10 (Length: 254)
Name: NF5065_high_10
Description: NF5065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5065_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 36710917 - 36710686
Alignment:
| Q |
1 |
ccattagatatcaaaactctcaagtctcaacaatttacttgtataaatcgagttcatgttataagtacatattgcatataatataatgcattgctaactg |
100 |
Q |
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| T |
36710917 |
ccattagatatcaaaactctcaagtctcaacaatttacttgtataaatcgagttcatgttataagtacatattgcatataatataatgcattgttaactg |
36710818 |
T |
|
| Q |
101 |
ttaatttgatcctgtaaaaataatcatcatgtatttgttttcattttgataatgattaataacatgtactagtaattatctactcttgtgtaaaagaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36710817 |
ttaatttgatcctgtaaaaataatcatcatgtatttgttttcattttgataatgattaataacatgtactagtaattatctactcttgtgtaaaagaaat |
36710718 |
T |
|
| Q |
201 |
ccaaatacatttcattctacctatgaaaagga |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
36710717 |
ccaaatacatttcattctacctatgaaaagga |
36710686 |
T |
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