View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5066_low_6 (Length: 362)

Name: NF5066_low_6
Description: NF5066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5066_low_6
NF5066_low_6
[»] chr1 (79 HSPs)
chr1 (26-181)||(29436574-29436729)
chr1 (26-184)||(39856680-39856838)
chr1 (26-188)||(27486148-27486310)
chr1 (26-188)||(29761590-29761752)
chr1 (27-170)||(50067718-50067861)
chr1 (26-188)||(49427987-49428149)
chr1 (26-188)||(13634740-13634902)
chr1 (26-188)||(19160918-19161080)
chr1 (26-188)||(48227139-48227301)
chr1 (26-188)||(49598329-49598491)
chr1 (26-181)||(30309296-30309451)
chr1 (26-188)||(22528108-22528270)
chr1 (27-188)||(13973530-13973691)
chr1 (26-184)||(45689722-45689879)
chr1 (26-180)||(47487486-47487640)
chr1 (27-188)||(12790712-12790873)
chr1 (64-181)||(46924722-46924839)
chr1 (26-188)||(41874333-41874493)
chr1 (26-132)||(48567903-48568009)
chr1 (283-362)||(33402351-33402430)
chr1 (283-362)||(33618773-33618852)
chr1 (30-177)||(49262449-49262596)
chr1 (26-125)||(51270403-51270502)
chr1 (27-188)||(24269805-24269965)
chr1 (67-188)||(38044631-38044752)
chr1 (30-172)||(23343249-23343391)
chr1 (31-180)||(18170836-18170985)
chr1 (64-169)||(39223713-39223818)
chr1 (64-188)||(35525636-35525760)
chr1 (27-170)||(35586376-35586519)
chr1 (31-188)||(17685798-17685955)
chr1 (27-188)||(37778712-37778872)
chr1 (99-188)||(51270506-51270595)
chr1 (26-102)||(29707066-29707142)
chr1 (70-181)||(27034821-27034932)
chr1 (40-115)||(46179797-46179872)
chr1 (27-180)||(35185589-35185742)
chr1 (64-188)||(49925820-49925944)
chr1 (64-115)||(36910203-36910254)
chr1 (67-180)||(42571222-42571336)
chr1 (27-115)||(41781273-41781361)
chr1 (64-188)||(49397287-49397411)
chr1 (65-115)||(5765559-5765609)
chr1 (67-188)||(14173197-14173318)
chr1 (65-112)||(16531895-16531942)
chr1 (65-115)||(37778437-37778487)
chr1 (289-362)||(7331069-7331142)
chr1 (65-114)||(14173557-14173606)
chr1 (26-87)||(46924853-46924914)
chr1 (29-169)||(50067738-50067878)
chr1 (65-113)||(36909919-36909967)
chr1 (26-181)||(39223647-39223802)
chr1 (65-112)||(17373082-17373129)
chr1 (65-115)||(13973282-13973332)
chr1 (65-115)||(17686156-17686206)
chr1 (65-115)||(18842811-18842861)
chr1 (72-114)||(21484252-21484294)
chr1 (65-115)||(41781051-41781101)
chr1 (29-169)||(13634778-13634918)
chr1 (65-114)||(40533085-40533134)
chr1 (66-106)||(16097895-16097935)
chr1 (67-114)||(23343001-23343048)
chr1 (65-111)||(16081641-16081687)
chr1 (99-169)||(19160902-19160972)
chr1 (99-169)||(48227123-48227193)
chr1 (66-115)||(35185330-35185379)
chr1 (65-114)||(35525996-35526045)
chr1 (67-115)||(6436132-6436180)
chr1 (65-113)||(24270165-24270213)
chr1 (29-80)||(29761628-29761679)
chr1 (65-115)||(13284059-13284109)
chr1 (99-169)||(22528092-22528162)
chr1 (65-115)||(24363611-24363661)
chr1 (99-169)||(29436558-29436628)
chr1 (99-169)||(39856784-39856854)
chr1 (99-169)||(41874439-41874509)
chr1 (99-169)||(47487586-47487656)
chr1 (65-114)||(35586731-35586780)
chr1 (65-114)||(38046233-38046282)
[»] chr4 (79 HSPs)
chr4 (26-188)||(1043350-1043512)
chr4 (26-188)||(45940128-45940290)
chr4 (28-184)||(885411-885567)
chr4 (26-188)||(9490083-9490245)
chr4 (26-188)||(40353217-40353379)
chr4 (26-188)||(49095346-49095508)
chr4 (26-188)||(56139511-56139673)
chr4 (26-188)||(28082838-28083000)
chr4 (26-188)||(31824130-31824292)
chr4 (26-188)||(6176759-6176921)
chr4 (26-188)||(21016621-21016783)
chr4 (26-188)||(27759930-27760092)
chr4 (46-180)||(47870719-47870850)
chr4 (26-188)||(55797344-55797506)
chr4 (26-178)||(21712132-21712284)
chr4 (33-188)||(4784811-4784966)
chr4 (26-180)||(46815975-46816129)
chr4 (27-180)||(956903-957056)
chr4 (64-188)||(6281945-6282069)
chr4 (33-170)||(14330101-14330238)
chr4 (27-180)||(36775967-36776120)
chr4 (34-174)||(38132576-38132716)
chr4 (64-181)||(49791383-49791500)
chr4 (64-188)||(22437554-22437678)
chr4 (27-188)||(42886885-42887046)
chr4 (64-188)||(2773652-2773776)
chr4 (283-362)||(36499715-36499794)
chr4 (69-170)||(14289901-14290002)
chr4 (27-180)||(21170056-21170209)
chr4 (64-188)||(34529236-34529360)
chr4 (283-362)||(55524617-55524696)
chr4 (90-180)||(37867160-37867250)
chr4 (67-173)||(49571755-49571861)
chr4 (67-180)||(241885-241998)
chr4 (30-171)||(49064640-49064781)
chr4 (67-180)||(51427640-51427753)
chr4 (64-188)||(43888941-43889065)
chr4 (287-362)||(45246144-45246219)
chr4 (65-188)||(49423197-49423320)
chr4 (64-115)||(49817442-49817493)
chr4 (65-115)||(10312625-10312675)
chr4 (65-115)||(49817000-49817050)
chr4 (30-180)||(34152735-34152883)
chr4 (65-115)||(4785221-4785271)
chr4 (65-115)||(17211622-17211672)
chr4 (65-115)||(24607086-24607136)
chr4 (65-115)||(32937724-32937774)
chr4 (289-362)||(22181572-22181645)
chr4 (65-114)||(49423557-49423606)
chr4 (110-169)||(37867100-37867159)
chr4 (99-169)||(1043334-1043404)
chr4 (65-115)||(21169809-21169859)
chr4 (65-115)||(24607411-24607461)
chr4 (99-169)||(28082822-28082892)
chr4 (29-170)||(40353255-40353396)
chr4 (29-169)||(6176797-6176937)
chr4 (29-169)||(21016659-21016799)
chr4 (103-188)||(25763250-25763335)
chr4 (65-114)||(32937401-32937450)
chr4 (65-114)||(42886624-42886673)
chr4 (29-169)||(49095330-49095470)
chr4 (65-115)||(957254-957304)
chr4 (65-115)||(3393657-3393707)
chr4 (65-115)||(34153085-34153135)
chr4 (91-169)||(39589514-39589592)
chr4 (99-169)||(55797328-55797398)
chr4 (65-114)||(2773367-2773416)
chr4 (65-114)||(36776319-36776368)
chr4 (31-80)||(39589535-39589584)
chr4 (77-109)||(18412962-18412994)
chr4 (63-115)||(49571461-49571513)
chr4 (26-81)||(20901228-20901283)
chr4 (98-169)||(56139495-56139566)
chr4 (99-169)||(14330191-14330261)
chr4 (102-184)||(34529347-34529428)
chr4 (99-169)||(45940112-45940182)
chr4 (73-115)||(49791735-49791777)
chr4 (65-114)||(34529596-34529645)
chr4 (26-74)||(25763201-25763249)
[»] chr3 (99 HSPs)
chr3 (26-188)||(13895324-13895486)
chr3 (26-188)||(51695375-51695537)
chr3 (26-183)||(11378423-11378580)
chr3 (28-170)||(34692749-34692891)
chr3 (26-181)||(43477654-43477809)
chr3 (26-188)||(2267936-2268098)
chr3 (26-188)||(49218177-49218339)
chr3 (26-188)||(49610777-49610939)
chr3 (26-187)||(50998003-50998164)
chr3 (26-184)||(44928079-44928237)
chr3 (26-173)||(24701728-24701875)
chr3 (26-186)||(36135622-36135782)
chr3 (29-181)||(44834935-44835087)
chr3 (26-188)||(34050342-34050504)
chr3 (26-188)||(49139496-49139658)
chr3 (26-188)||(54391057-54391219)
chr3 (35-188)||(39416388-39416541)
chr3 (28-173)||(42383669-42383814)
chr3 (26-173)||(47066302-47066449)
chr3 (26-188)||(2646318-2646480)
chr3 (26-188)||(25576032-25576194)
chr3 (50-180)||(53826469-53826599)
chr3 (27-180)||(36720783-36720936)
chr3 (27-180)||(34471522-34471675)
chr3 (67-180)||(46346058-46346171)
chr3 (27-180)||(46413767-46413920)
chr3 (26-188)||(3494471-3494633)
chr3 (54-188)||(52568851-52568985)
chr3 (27-188)||(34646653-34646814)
chr3 (27-188)||(41578525-41578686)
chr3 (283-362)||(39649091-39649170)
chr3 (27-188)||(2429107-2429268)
chr3 (64-188)||(51012725-51012849)
chr3 (30-186)||(55268501-55268657)
chr3 (283-362)||(15041348-15041427)
chr3 (30-173)||(49274026-49274169)
chr3 (27-180)||(10052832-10052985)
chr3 (27-188)||(19452585-19452746)
chr3 (71-188)||(42322836-42322953)
chr3 (26-127)||(46403618-46403719)
chr3 (64-188)||(41804559-41804683)
chr3 (283-362)||(34085953-34086032)
chr3 (27-188)||(45099913-45100074)
chr3 (66-134)||(7246753-7246821)
chr3 (67-188)||(55206322-55206443)
chr3 (287-362)||(35063812-35063887)
chr3 (63-180)||(14632101-14632218)
chr3 (26-101)||(4003616-4003691)
chr3 (64-115)||(7954575-7954626)
chr3 (289-362)||(19867625-19867696)
chr3 (65-115)||(27187685-27187735)
chr3 (65-112)||(20375685-20375732)
chr3 (291-362)||(35996349-35996420)
chr3 (99-169)||(3494579-3494649)
chr3 (66-115)||(15637361-15637410)
chr3 (65-113)||(7955024-7955072)
chr3 (93-180)||(51015955-51016042)
chr3 (65-115)||(2428859-2428909)
chr3 (65-115)||(8633162-8633212)
chr3 (65-115)||(18441114-18441164)
chr3 (65-115)||(19486188-19486238)
chr3 (29-169)||(2646356-2646496)
chr3 (66-115)||(6754575-6754624)
chr3 (66-115)||(25887408-25887457)
chr3 (29-169)||(34050326-34050466)
chr3 (65-114)||(34647065-34647114)
chr3 (65-114)||(42323188-42323237)
chr3 (66-115)||(43570283-43570332)
chr3 (65-114)||(49273771-49273820)
chr3 (29-169)||(54391041-54391181)
chr3 (66-114)||(34471874-34471922)
chr3 (62-110)||(42949754-42949802)
chr3 (67-114)||(8632839-8632886)
chr3 (29-183)||(36135593-36135746)
chr3 (65-112)||(45100265-45100312)
chr3 (99-169)||(4003637-4003707)
chr3 (65-115)||(6464144-6464194)
chr3 (72-114)||(10053184-10053226)
chr3 (99-169)||(11378526-11378596)
chr3 (65-115)||(41578277-41578327)
chr3 (65-115)||(46346409-46346459)
chr3 (99-169)||(46403602-46403672)
chr3 (65-114)||(41804274-41804323)
chr3 (131-188)||(46405725-46405782)
chr3 (29-169)||(49139534-49139674)
chr3 (65-114)||(51015649-51015698)
chr3 (65-114)||(55206682-55206731)
chr3 (65-113)||(51013077-51013125)
chr3 (93-169)||(51015880-51015956)
chr3 (65-112)||(7246466-7246513)
chr3 (102-169)||(47066286-47066353)
chr3 (154-188)||(27187817-27187851)
chr3 (99-169)||(43477638-43477708)
chr3 (99-169)||(49610761-49610831)
chr3 (99-169)||(50997987-50998057)
chr3 (66-115)||(33448952-33449001)
chr3 (65-114)||(46414132-46414181)
chr3 (105-173)||(43570558-43570626)
chr3 (65-113)||(52569208-52569256)
[»] chr8 (38 HSPs)
chr8 (29-188)||(44051054-44051213)
chr8 (26-179)||(42168408-42168561)
chr8 (29-188)||(41275681-41275840)
chr8 (26-180)||(28705589-28705743)
chr8 (26-188)||(24861954-24862116)
chr8 (26-188)||(22549690-22549852)
chr8 (26-188)||(15031765-15031927)
chr8 (26-188)||(484699-484861)
chr8 (26-140)||(26452923-26453037)
chr8 (26-170)||(40415869-40416013)
chr8 (31-180)||(38033373-38033522)
chr8 (26-138)||(33799241-33799353)
chr8 (29-188)||(18439732-18439891)
chr8 (34-173)||(43637220-43637358)
chr8 (64-188)||(42604104-42604228)
chr8 (283-362)||(34277059-34277138)
chr8 (54-188)||(40703004-40703138)
chr8 (26-89)||(41017288-41017351)
chr8 (68-188)||(41856410-41856530)
chr8 (68-188)||(28167439-28167559)
chr8 (65-115)||(16576024-16576074)
chr8 (64-107)||(2417622-2417665)
chr8 (65-115)||(16576349-16576399)
chr8 (99-183)||(41275649-41275732)
chr8 (65-115)||(18440091-18440141)
chr8 (65-115)||(44942877-44942927)
chr8 (99-169)||(484807-484877)
chr8 (65-115)||(37780512-37780562)
chr8 (33-169)||(22549674-22549810)
chr8 (65-114)||(40702729-40702778)
chr8 (119-183)||(41363911-41363975)
chr8 (99-169)||(15031873-15031943)
chr8 (99-169)||(26452907-26452977)
chr8 (99-169)||(41017297-41017367)
chr8 (72-114)||(41856769-41856811)
chr8 (66-114)||(19241959-19242007)
chr8 (66-114)||(19315143-19315191)
chr8 (67-115)||(31171614-31171662)
[»] scaffold0176 (2 HSPs)
scaffold0176 (26-188)||(2394-2556)
scaffold0176 (99-169)||(2378-2448)
[»] chr7 (56 HSPs)
chr7 (26-188)||(34141469-34141631)
chr7 (26-188)||(45362694-45362856)
chr7 (26-180)||(28978651-28978806)
chr7 (26-180)||(17183820-17183974)
chr7 (26-188)||(13920909-13921071)
chr7 (26-181)||(30361120-30361275)
chr7 (26-188)||(10523672-10523834)
chr7 (26-188)||(17839913-17840075)
chr7 (64-188)||(9366561-9366685)
chr7 (26-173)||(20378487-20378634)
chr7 (26-188)||(41218217-41218379)
chr7 (29-173)||(34157410-34157554)
chr7 (26-181)||(39476689-39476844)
chr7 (67-188)||(42683058-42683179)
chr7 (26-115)||(48220258-48220347)
chr7 (64-188)||(20565400-20565524)
chr7 (29-188)||(48271258-48271417)
chr7 (27-180)||(21186745-21186898)
chr7 (29-180)||(18238172-18238323)
chr7 (65-188)||(20877490-20877613)
chr7 (31-134)||(26601273-26601376)
chr7 (29-188)||(30354253-30354412)
chr7 (28-188)||(28113832-28113991)
chr7 (28-188)||(40589154-40589302)
chr7 (27-171)||(36393280-36393424)
chr7 (82-170)||(41622741-41622829)
chr7 (64-188)||(10224712-10224835)
chr7 (65-180)||(42735622-42735737)
chr7 (66-188)||(46861637-46861755)
chr7 (64-180)||(34353271-34353387)
chr7 (65-115)||(21614582-21614632)
chr7 (66-115)||(1642389-1642438)
chr7 (72-115)||(15337702-15337745)
chr7 (65-112)||(21614260-21614307)
chr7 (99-169)||(9366669-9366739)
chr7 (99-169)||(17839897-17839967)
chr7 (65-115)||(20877849-20877899)
chr7 (65-115)||(36393622-36393672)
chr7 (66-115)||(21187096-21187145)
chr7 (65-180)||(43350832-43350947)
chr7 (99-169)||(13920893-13920963)
chr7 (99-169)||(17183804-17183874)
chr7 (99-169)||(20378580-20378650)
chr7 (65-115)||(21650883-21650933)
chr7 (292-350)||(23561756-23561814)
chr7 (99-169)||(34141453-34141523)
chr7 (65-115)||(46861991-46862041)
chr7 (65-115)||(48271008-48271058)
chr7 (29-169)||(20565346-20565486)
chr7 (65-114)||(30354613-30354662)
chr7 (291-350)||(12169990-12170049)
chr7 (66-113)||(28114192-28114239)
chr7 (65-104)||(48314988-48315027)
chr7 (99-169)||(39476790-39476860)
chr7 (101-183)||(40589123-40589204)
chr7 (29-87)||(40589206-40589264)
[»] chr2 (56 HSPs)
chr2 (30-180)||(3942019-3942169)
chr2 (26-181)||(22493878-22494033)
chr2 (28-184)||(5420749-5420905)
chr2 (26-188)||(29073649-29073811)
chr2 (28-181)||(42120621-42120774)
chr2 (29-188)||(16582433-16582592)
chr2 (26-188)||(39799309-39799471)
chr2 (26-188)||(17425394-17425556)
chr2 (29-188)||(22002442-22002601)
chr2 (64-188)||(41498529-41498653)
chr2 (26-181)||(8557171-8557326)
chr2 (26-173)||(10359652-10359799)
chr2 (64-181)||(32736731-32736848)
chr2 (64-188)||(28476148-28476272)
chr2 (64-180)||(34521189-34521305)
chr2 (26-132)||(18393956-18394062)
chr2 (70-188)||(35492239-35492357)
chr2 (283-362)||(11574478-11574557)
chr2 (27-188)||(19471064-19471225)
chr2 (27-180)||(23408321-23408474)
chr2 (27-170)||(43492060-43492203)
chr2 (77-180)||(24108245-24108348)
chr2 (67-181)||(2918815-2918929)
chr2 (68-180)||(40676829-40676941)
chr2 (38-137)||(17538434-17538533)
chr2 (67-188)||(6977486-6977607)
chr2 (66-115)||(20148492-20148541)
chr2 (108-188)||(43983412-43983492)
chr2 (65-112)||(33404373-33404420)
chr2 (287-362)||(35001094-35001169)
chr2 (65-115)||(16253814-16253864)
chr2 (65-115)||(29111496-29111546)
chr2 (65-114)||(6902340-6902389)
chr2 (287-362)||(8276568-8276642)
chr2 (288-351)||(10325281-10325344)
chr2 (65-115)||(10364431-10364481)
chr2 (65-115)||(35491997-35492047)
chr2 (65-115)||(40677169-40677219)
chr2 (65-114)||(6977198-6977247)
chr2 (29-169)||(39799347-39799487)
chr2 (88-180)||(24936434-24936526)
chr2 (64-98)||(10364162-10364196)
chr2 (99-169)||(10364180-10364250)
chr2 (99-169)||(17425378-17425448)
chr2 (65-115)||(19471428-19471478)
chr2 (99-169)||(22002423-22002493)
chr2 (65-115)||(43491812-43491862)
chr2 (65-114)||(2919160-2919209)
chr2 (99-169)||(5420731-5420801)
chr2 (99-169)||(29073633-29073703)
chr2 (99-169)||(42120603-42120673)
chr2 (95-180)||(25685097-25685182)
chr2 (65-114)||(27130304-27130353)
chr2 (65-114)||(37312290-37312339)
chr2 (117-169)||(3936628-3936680)
chr2 (99-183)||(8557272-8557355)
[»] scaffold0199 (2 HSPs)
scaffold0199 (26-181)||(11211-11366)
scaffold0199 (99-169)||(11312-11382)
[»] scaffold0589 (1 HSPs)
scaffold0589 (26-188)||(4889-5051)
[»] chr5 (59 HSPs)
chr5 (26-188)||(8575586-8575748)
chr5 (26-188)||(38854757-38854919)
chr5 (26-188)||(27660822-27660984)
chr5 (28-173)||(40012220-40012365)
chr5 (29-188)||(22284173-22284332)
chr5 (26-188)||(6674-6836)
chr5 (30-188)||(3459396-3459554)
chr5 (31-184)||(19400970-19401123)
chr5 (64-188)||(11028088-11028212)
chr5 (26-188)||(30710197-30710359)
chr5 (64-188)||(19036119-19036243)
chr5 (26-188)||(28881590-28881752)
chr5 (27-188)||(1399746-1399907)
chr5 (26-183)||(1971967-1972124)
chr5 (27-180)||(6792925-6793078)
chr5 (27-180)||(7082877-7083030)
chr5 (27-188)||(35565876-35566037)
chr5 (283-362)||(5505592-5505671)
chr5 (27-188)||(25498687-25498848)
chr5 (64-188)||(1695432-1695556)
chr5 (64-188)||(18308901-18309025)
chr5 (66-188)||(11347351-11347473)
chr5 (27-180)||(1171792-1171945)
chr5 (27-188)||(20196683-20196843)
chr5 (64-180)||(34683374-34683490)
chr5 (64-188)||(36349764-36349891)
chr5 (283-362)||(762472-762551)
chr5 (283-362)||(30490915-30490994)
chr5 (287-362)||(34016791-34016866)
chr5 (46-180)||(3601967-3602101)
chr5 (26-80)||(8538553-8538607)
chr5 (65-115)||(12743043-12743093)
chr5 (65-115)||(12805861-12805911)
chr5 (99-169)||(30710181-30710251)
chr5 (29-169)||(8575624-8575764)
chr5 (29-169)||(27660860-27661000)
chr5 (65-112)||(33370986-33371033)
chr5 (65-115)||(1400102-1400152)
chr5 (67-173)||(4723530-4723636)
chr5 (65-115)||(4723874-4723924)
chr5 (65-111)||(10398147-10398193)
chr5 (65-115)||(17366531-17366581)
chr5 (65-115)||(36350125-36350175)
chr5 (65-114)||(1695147-1695196)
chr5 (29-169)||(11028034-11028174)
chr5 (97-169)||(8538537-8538609)
chr5 (65-113)||(35565628-35565676)
chr5 (99-169)||(6782-6852)
chr5 (99-169)||(7082860-7082930)
chr5 (65-115)||(12743379-12743428)
chr5 (65-115)||(12806198-12806247)
chr5 (99-169)||(28881574-28881644)
chr5 (65-115)||(33371311-33371361)
chr5 (29-169)||(38854741-38854881)
chr5 (65-113)||(18308617-18308665)
chr5 (72-115)||(34683726-34683769)
chr5 (99-169)||(1171775-1171845)
chr5 (154-188)||(17366415-17366449)
chr5 (65-113)||(6793278-6793326)
[»] chr6 (35 HSPs)
chr6 (26-180)||(13617350-13617504)
chr6 (26-188)||(6206089-6206251)
chr6 (64-188)||(11693094-11693218)
chr6 (29-188)||(2192999-2193158)
chr6 (29-173)||(24020554-24020698)
chr6 (68-188)||(29067144-29067264)
chr6 (68-188)||(29108731-29108851)
chr6 (26-181)||(35058183-35058338)
chr6 (64-188)||(27640819-27640943)
chr6 (50-188)||(13403448-13403586)
chr6 (67-188)||(12397426-12397547)
chr6 (64-188)||(32027066-32027190)
chr6 (64-188)||(32037125-32037249)
chr6 (285-362)||(31519737-31519814)
chr6 (64-188)||(35020675-35020799)
chr6 (64-137)||(7821232-7821305)
chr6 (65-188)||(34802620-34802743)
chr6 (65-114)||(801526-801575)
chr6 (65-114)||(4495266-4495315)
chr6 (99-169)||(2192980-2193050)
chr6 (65-115)||(14122963-14123013)
chr6 (65-107)||(23911112-23911154)
chr6 (99-169)||(24020647-24020717)
chr6 (29-169)||(6206073-6206213)
chr6 (99-183)||(35058284-35058367)
chr6 (65-115)||(13402895-13402945)
chr6 (29-169)||(11693040-11693180)
chr6 (65-114)||(30257377-30257426)
chr6 (65-114)||(32027426-32027475)
chr6 (65-114)||(32037485-32037534)
chr6 (303-362)||(13543073-13543132)
chr6 (99-166)||(13617450-13617517)
chr6 (65-114)||(12397138-12397187)
chr6 (65-114)||(35021035-35021084)
chr6 (99-151)||(27640783-27640835)
[»] scaffold0268 (2 HSPs)
scaffold0268 (29-188)||(15076-15235)
scaffold0268 (99-188)||(15038-15127)
[»] scaffold0293 (1 HSPs)
scaffold0293 (287-360)||(9671-9744)
[»] scaffold0700 (1 HSPs)
scaffold0700 (287-360)||(364-437)
[»] scaffold0192 (1 HSPs)
scaffold0192 (91-180)||(17392-17481)
[»] scaffold1063 (1 HSPs)
scaffold1063 (291-362)||(2316-2387)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 29436574 - 29436729
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29436574 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 29436673  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||||| |||||||    
T  29436674 tgttgatcgaatactggagtcctgctagttagcaagtttgaatttgccccattcag 29436729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 39856838 - 39856680
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39856838 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 39856739  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    ||||||||||||||| ||||| ||| ||||||||| |||||||||||  ||||||||||    
T  39856738 tgttgatcgaatactggagtcctgctggttagcaaatttgaatttgctccattcagagg 39856680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 27486310 - 27486148
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  27486310 tcggtaggactccaacatttgataagcatcttgaacgctgatattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccagcgttcaaga 27486211  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  27486210 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 27486148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 29761752 - 29761590
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29761752 tcggcgggactccaacatatgataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttgaaga 29761653  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
     | |||||||||||| ||||| ||| ||||||||||||||||||||||  |||||| ||||||    
T  29761652 cgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccaaattcagtggtaag 29761590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 50067861 - 50067718
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50067861 cggcaggactccaacattcgataaacgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagat 50067762  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    |||||||||||  | ||||| ||| | |||||||||||||||||    
T  50067761 gttgatcgaatgttggagtcctgctgcttagcaagtttgaattt 50067718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 49427987 - 49428149
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49427987 tcggtaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49428086  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||| ||||| | | ||| ||| | |||||||||||||||||||  ||||||| ||||||    
T  49428087 tgttgattgaatattggtgtcctgctgcttagcaagtttgaatttgctccattcagtggtaag 49428149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 13634902 - 13634740
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13634902 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13634803  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | ||||||||||| |||||||| ||||||| ||||||    
T  13634802 tgctgatcgaatactggagtcctgctgcttagcaagtttaaatttgccccattcagtggtaag 13634740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 19160918 - 19161080
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19160918 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 19161017  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  19161018 tgctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 19161080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 48227139 - 48227301
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||| ||  ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||    
T  48227139 tcggcaggacttcagtattcgataagcgtcttgaacgctggtattcaagtgtcaagaaatgcacctcattcttttgacacttgaataccagtgttccaga 48227238  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  48227239 tgatgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 48227301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 49598491 - 49598329
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| ||||||| |||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  49598491 tcggcatgactccaacattcgataagcctcttgaatgatggtattcatgtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 49598392  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||||||||||| ||||||    
T  49598391 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgcctcattcagtggtaag 49598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 30309451 - 30309296
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||| ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  30309451 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcgttcttttgacacttgaataccatcattcaaga 30309352  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    ||||||||| ||  | ||||| ||| | ||| |||||||||||||||| |||||||    
T  30309351 tgttgatcgtatgttggagtcatgctgcttaacaagtttgaatttgccccattcag 30309296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 22528108 - 22528270
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||||||| ||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  22528108 tcggcaggactccagcatttgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttgtgacacttgaataccagtgttcaaga 22528207  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||  ||| | ||| |||||||||||||||| ||||||| ||||||    
T  22528208 tgctgatcgaatactggtgttctgctgcttaacaagtttgaatttgccccattcagtggtaag 22528270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 13973530 - 13973691
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  13973530 cggcaggaatccagcatttgatgagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 13973629  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | |||| | ||  | ||||||||| | ||| |||||||||||||||| ||||||| ||||||    
T  13973630 gctgattggatgttggagtcttgctgcttaacaagtttgaatttgccccattcagtggtaag 13973691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 45689722 - 45689879
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| | ||||| |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  45689722 tcggcaagactccaacattag-taagcatcttgaacgatgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaaga 45689820  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    ||||||||| ||  | ||||| ||| | |||||||||| ||||||||| ||||||||||    
T  45689821 tgttgatcgtatgttggagtcctgctgcttagcaagttcgaatttgccccattcagagg 45689879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 47487640 - 47487486
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||| ||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  47487640 tcggcatgactccaatattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 47487541  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || |||| ||||| | ||||| |||   ||| ||||||| |||||||| ||||||    
T  47487540 tgctgatggaatattggagtcctgcttcttaacaagtttaaatttgccccattca 47487486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 12790873 - 12790712
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||||| | |||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||    
T  12790873 cggcaggaatccaacattcgataaccatcttgaataatggtattcaagtgtcaaggaatgcaactcattcttttgacacttgaatacgatcattcaagat 12790774  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||| ||  | ||||| ||| | ||||||||||||||||| || |||| |||||||||    
T  12790773 gttgatcgtatgttggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaag 12790712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 46924839 - 46924722
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||  | ||||| ||| | ||||||||||    
T  46924839 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgttgatcgtatgttggagtcatgctgcttagcaagtt 46924740  T
Q  164 tgaatttgcctcattcag 181  Q
    |||||||||| |||||||    
T  46924739 tgaatttgccacattcag 46924722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 41874493 - 41874333
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||||  | |||||||    
T  41874493 tcggcatgactccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacactt--ataccctcattcaaga 41874396  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||| ||  | ||||| ||  | ||| |||||||||||||||| |||| || ||||||    
T  41874395 tgttgatcgtatgttggagtcctgttgcttaacaagtttgaatttgccccattgagtggtaag 41874333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 48568009 - 48567903
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| ||||||||||||  |||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||    
T  48568009 tcggcatgactccaacattcaataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactatcattcaaga 48567910  T
Q  126 tgttgat 132  Q
    |||||||    
T  48567909 tgttgat 48567903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 33402351 - 33402430
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33402351 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 33402430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 33618773 - 33618852
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33618773 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 33618852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 49262596 - 49262449
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    |||||||||| |||| ||||||| |||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |    
T  49262596 caggactccagcattcgataagcctcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataacatcattcaagatgct 49262497  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcat 177  Q
    | ||  ||  ||||||| ||  | ||||||||||||||||||||||||    
T  49262496 gttcagatgttagagtcatgatgtttagcaagtttgaatttgcctcat 49262449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 51270403 - 51270502
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| |||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||    
T  51270403 tcggcaggactccaacattcgataagcgtcttcaatgttggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaatatcagcgttgaaga 51270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 24269965 - 24269805
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||| ||| | || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||    
T  24269965 cggcaggaatccaacattcgatgagcattttgaattatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaat 24269866  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||| |||| || || ||||| ||| | ||||||||||||||||||||  ||||| |||||||    
T  24269865 gttcatcgcat-ctggagtcctgctgtttagcaagtttgaatttgcccaattcaaaggtaag 24269805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 38044752 - 38044631
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||  || |||||||| ||  | |||||||||||||    
T  38044752 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcagatgctagagtcctgttgtttagcaagtttga 38044653  T
Q  167 atttgcctcattcagaggtaag 188  Q
    |||||||  |||||| ||||||    
T  38044652 atttgcccaattcagtggtaag 38044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 23343249 - 23343391
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||| ||||||||| ||| ||| |||| ||   |||||| |||||||||||||||||| |||| ||||||||||||||||||||| | |||||||||||    
T  23343249 caggaatccaacattcgatgagcatcttgaataatggtatccaagtgtcaaggaatgcagctcagtcttttgacacttgaataccatcattcaagatgtt 23343348  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgc 172  Q
     |||| || || ||||| ||| | |||||||||||||||||||    
T  23343349 catcgcatgctggagtcctgctgtttagcaagtttgaatttgc 23343391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 18170836 - 18170985
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 130  Q
    ||||||||| |||| ||| | | ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |  | || || ||| |     
T  18170836 aggactccagcattcgatgaacatcttaaatgatggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaatatcgtcatttaaaatgctc 18170935  T
Q  131 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||| | ||||||||| | ||| |||||||||||||||| ||||||    
T  18170936 atcgaatattggagtcttgcagtttaacaagtttgaatttgccccattca 18170985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 39223713 - 39223818
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||  | || || ||||| ||| ||||||    
T  39223713 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaagatgcttatcgaatgttggactcctgccgattaacaagtt 39223812  T
Q  164 tgaatt 169  Q
    ||||||    
T  39223813 tgaatt 39223818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 35525760 - 35525636
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| || | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  35525760 tggtatccaagtgtcaatgaatgcacctcattcttttgacacttgaatatcatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaagtt 35525661  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||| ||||||    
T  35525660 tgaatttaccccattcaggggtaag 35525636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 35586519 - 35586376
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| |||||||   |||||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  35586519 cggcaggaatccagcattcgatgagcatcttaaataatggtatccaagtgtcaaggaatgcacctcattcttttgacacttaaataccatcattcaagat 35586420  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    | | |||| ||  | ||||||||  | |||||||||||||||||    
T  35586419 gctcatcgcatgttggagtcttgttgtttagcaagtttgaattt 35586376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 17685955 - 17685798
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 130  Q
    |||||||||  ||| ||| ||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||| ||||| | || || ||| |     
T  17685955 aggactccagtattcgatgagcctcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgattaccatcatttaaaatgctc 17685856  T
Q  131 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||| | | ||||  ||| | |||||||||||||||||  | ||||||||||||||    
T  17685855 atcgaacattggagttctgctgtttagcaagtttgaatttatcccattcagaggtaag 17685798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 37778712 - 37778872
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| |||| ||   |||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  37778712 cggcaggaatccagcattcgatgagcctcttgaataatggtatccaagtgtcaaggaatgcacctcattcttttgacagttgaataccatcattcaagat 37778811  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| ||  | ||||| ||| | ||||||||||||||||| ||| ||| |||||||||    
T  37778812 gatcatcgcatgttggagtcctgctgtttagcaagtttgaatttacct-atttagaggtaag 37778872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 51270506 - 51270595
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||||| || |||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  51270506 ttgacacttgaatatcagcgttgaagacgctgatcgaatactagagtcatgctggttagcaagtttgaatttgcctcattcagtggtaag 51270595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 29707142 - 29707066
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttga 102  Q
    ||||||||||| |||||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  29707142 tcggcaggacttcaacattcaataagcgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttga 29707066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 181
Target Start/End: Complemental strand, 27034932 - 27034821
Alignment:
Q  70 tcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| ||  | ||||| ||| | ||||  | ||||||||    
T  27034932 tcaagtgtcaaagaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcgtatgttggagtcctgctgcttagtcattttgaatt 27034833  T
Q  170 tgcctcattcag 181  Q
    |||| |||||||    
T  27034832 tgccccattcag 27034821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 46179872 - 46179797
Alignment:
Q  40 acatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46179872 acattcgataagcctcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 46179797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 35185589 - 35185742
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| |||| ||   |||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  35185589 cggcaggaatccagcattcgatgagcatcttgaataatggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagat 35185688  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | | |||| | | | ||||| | | | |||||||||||||||||| | ||||||    
T  35185689 gctcatcgcaaaatggagtcctactgtttagcaagtttgaatttgtcccattca 35185742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 49925944 - 49925820
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||  ||||| | |||| ||  | ||| | ||| | ||||||| ||    
T  49925944 tggtattcaagtgtcaagaaatgcacctcattcttttgaaacttgaataccatcgttgcagatgctcatcggatgttggagccctgctgtttagcaaatt 49925845  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  49925844 tgaatttgccccattcagtggtaag 49925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 36910203 - 36910254
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36910203 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 36910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 42571336 - 42571222
Alignment:
Q  67 tattcaagtgtcaa-ggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 165  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | || || ||| | |||| || |||||||| |||   ||||||||| ||    
T  42571336 tattcaagtgtcaaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctagagtcctgctatttagcaagtatg 42571237  T
Q  166 aatttgcctcattca 180  Q
    |||||||| ||||||    
T  42571236 aatttgccccattca 42571222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 41781273 - 41781361
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| || ||||||||| ||| ||| | || || | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41781273 cggcacgaatccaacattcgatgagcattttgaatgatggtattcaagtgtcatggaatgcacctcattcttttgacacttgaatacca 41781361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 49397287 - 49397411
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| | || || ||| | |||| || || ||||| ||| | ||  ||||||    
T  49397287 tggtattcaagtgtcaaggaatgcacctcgttcttttgatacttgaataccatcatttaaaatgctcatcgcatgctggagtcctgctgtttgacaagtt 49397386  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||||| ||||    
T  49397387 tgaatttaccccattcagagataag 49397411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 5765559 - 5765609
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5765559 ggtattaaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 5765609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 14173318 - 14173197
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||| || | || || ||| | |||| || || ||||| ||| | |||||||||||||    
T  14173318 tattcatgtgtcaaggaatgcatctcattcttttgacacatgaatatcatcatttaaaatgctcatcgcatgctggagtcctgctgtttagcaagtttga 14173219  T
Q  167 atttgcctcattcagaggtaag 188  Q
    |||| || ||||||| ||||||    
T  14173218 atttaccccattcaggggtaag 14173197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 16531942 - 16531895
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16531942 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 16531895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 37778437 - 37778487
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  37778437 ggtattgaagtgtcaaggaatgaacctcattcttttgacacttgaatacca 37778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 7331142 - 7331069
Alignment:
Q  289 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||| ||||| ||||||||||||||||  ||||  ||||||||| |||||||||||||||| |||||||||    
T  7331142 actagatttatctatagaaatagtaaatccatcccttgccgcttgtcaacgaacccaaccaagtaattcttctc 7331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 14173606 - 14173557
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  14173606 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacc 14173557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 46924914 - 46924853
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgc 87  Q
    ||||||||| ||||||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  46924914 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgc 46924853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 50067738 - 50067878
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||||||| ||| | | |||| ||||||||||||||||||||||  |||||     ||||| || ||||||||||||||| |||| |||| |    
T  50067738 gcaggactccaacattcgatcaacatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagcgtttaagacg 50067836  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    || |||||||  | ||||| ||||||||| ||||||||||||    
T  50067837 tttatcgaatgttggagtcctgccggttaacaagtttgaatt 50067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 36909919 - 36909967
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  36909919 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatac 36909967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 39223802 - 39223647
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtc-aaggaatgcacctcattcttttgacacttgaataccaacgttcaag 124  Q
    ||||||||| ||||||||| ||||||| |||| || ||||||||||||||||| || |||||     |||||  ||||||||||||||||| | ||||||    
T  39223802 tcggcaggagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaaagaatgaggtgcattc-cttgacacttgaataccatcattcaag 39223704  T
Q  125 atgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    |||||||||| ||  | ||||| ||| | ||||   ||||||||||||| |||||||    
T  39223703 atgttgatcggatgttggagtcgtgctgcttagggtgtttgaatttgccccattcag 39223647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 17373082 - 17373129
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  17373082 ggtattgaagtgtcaaagaatgcacctcattcttttgacacttgaata 17373129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 13973282 - 13973332
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  13973282 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 13973332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 17686206 - 17686156
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  17686206 ggtattgaagtttcaaggaatgcacctcatttttttgacacttgaatacca 17686156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 18842811 - 18842861
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  18842811 ggtattgaagtgtcaaagaatgcacctcattcttgtgacacttgaatacca 18842861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 21484294 - 21484252
Alignment:
Q  72 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  21484294 aagtgtcaaggaatgcacctcattcttttgacacttcaatacc 21484252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 41781051 - 41781101
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  41781051 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 41781101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 13634778 - 13634918
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  |||||||| |    
T  13634778 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagtgttcaagagg 13634876  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  13634877 cttatcgaatactggagtcctgccgattaacaagtttgaatt 13634918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 40533134 - 40533085
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  40533134 ggtattgaagtgtcaacgaatggacctcattcttttgacacttgaatacc 40533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 16097935 - 16097895
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacact 106  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  16097935 gtattgaagtgtcaaggaatgcacctcattcttttgacact 16097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 23343001 - 23343048
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  23343001 tattgaagtgtcaaggaatggacctcattcttttgacacctgaatacc 23343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 16081641 - 16081687
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaat 111  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  16081641 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaat 16081687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 19160972 - 19160902
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  19160972 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaatt 19160902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 48227193 - 48227123
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | ||||||||||  |||| ||||| ||| ||||||||||||    
T  48227193 ttgacacttgaataccagcgttcaagacgcttatcgaatactgaagtcctgccgattaacaagtttgaatt 48227123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 35185330 - 35185379
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||| ||||| | ||||||||||||||||||||||||||    
T  35185330 gtattgaagtgtcaatgaatggatctcattcttttgacacttgaatacca 35185379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 35526045 - 35525996
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| || |||||||||||  |||||||||||||||||||||||||||    
T  35526045 ggtattgaattgtcaaggaatagacctcattcttttgacacttgaatacc 35525996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 6436132 - 6436180
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||||    
T  6436132 tattgaagtgtcaaggaatggacctcattcttttggcatttgaatacca 6436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 24270213 - 24270165
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| || |||||| ||||| ||||||||||||||||||||||||||    
T  24270213 ggtattgaaatgtcaatgaatgaacctcattcttttgacacttgaatac 24270165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 29761628 - 29761679
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaa 80  Q
    |||||||||||  ||| ||| |||||||| ||||||||||||||||||||||    
T  29761628 gcaggactccagtattcgatcagcgtcttcaacgctggtattcaagtgtcaa 29761679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 13284059 - 13284109
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||   ||||||||||||||||| ||||||||||    
T  13284059 ggtattgaagtgtcaaggaaatgacctcattcttttgacatttgaatacca 13284109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 22528162 - 22528092
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | ||| ||| || ||||| ||||| ||| ||||||||||||    
T  22528162 ttgacacttgaataccattgttcaagatgctcatcaaatgctggagtcctgccgattaacaagtttgaatt 22528092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 24363661 - 24363611
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||| ||||||||||||||||||| ||||||| | |||||||    
T  24363661 ggtattgaagtgttaaggaatgcacctcattctgttgacacgtcaatacca 24363611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 29436628 - 29436558
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  29436628 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 29436558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 39856784 - 39856854
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  39856784 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 39856854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 41874439 - 41874509
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| | ||||||||| | |||||||  | ||||| ||||| ||| ||||||||||||    
T  41874439 ttgacacttgaataccagcattcaagatgcttatcgaatgttggagtcatgccgattaacaagtttgaatt 41874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 47487586 - 47487656
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| | ||||||| | | |||||||| | ||||| ||||| ||| ||||||||||||    
T  47487586 ttgacacttgaataccagcattcaagaggcttatcgaatattggagtcatgccgattaacaagtttgaatt 47487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 35586780 - 35586731
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||  |||||||||    
T  35586780 ggtattgaagtgtcaatgaatggacctcattcttttgacttttgaatacc 35586731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 38046282 - 38046233
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| || |||||| ||||| ||||||||||||||||| |||||||||    
T  38046282 ggtattaaaatgtcaacgaatggacctcattcttttgacatttgaatacc 38046233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 1043350 - 1043512
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1043350 tcggcaggactccagcattcgataagcgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 1043449  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  1043450 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 1043512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 45940128 - 45940290
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45940128 tcggcatgactccatcattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 45940227  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||||||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  45940228 tgctgatcgaatactagagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 45940290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 885411 - 885567
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  885411 ggcaggactccaacattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 885510  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    ||||||||||| | ||||| ||| | |||||||||||||||||||| |||| |||||    
T  885511 ttgatcgaatattggagtcctgctgcttagcaagtttgaatttgccccatttagagg 885567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 9490083 - 9490245
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| ||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9490083 tcgggaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 9490182  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || ||||||||| || ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  9490183 tgctgatcgaattctggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 9490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 40353379 - 40353217
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40353379 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 40353280  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  40353279 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 40353217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 49095346 - 49095508
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49095346 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49095445  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  49095446 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 49095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 56139511 - 56139673
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||    
T  56139511 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccagcgttataga 56139610  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||  ||  |||||||||||||||||||||| ||||||| ||||||    
T  56139611 tgctgatcgaatactggagttctgttggttagcaagtttgaatttgccccattcagtggtaag 56139673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 28082838 - 28083000
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||    
T  28082838 tcggcaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactagtgttcaaga 28082937  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  28082938 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 28083000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 31824292 - 31824130
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  31824292 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 31824193  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||| ||  | ||||| |||   |||||||||||||||||||| ||||||| ||||||    
T  31824192 tgttgatcgtatgttggagtcctgctacttagcaagtttgaatttgccccattcagtggtaag 31824130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 6176921 - 6176759
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6176921 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 6176822  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  6176821 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 6176759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 21016783 - 21016621
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21016783 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 21016684  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  21016683 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 21016621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 27759930 - 27760092
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  27759930 tcggcaggactccaacattcgataagcctcttgaatgttggtattcaaatgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 27760029  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |  |||||| ||  | ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  27760030 ttctgatcgtatgtttgagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 27760092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 47870719 - 47870850
Alignment:
Q  46 gataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagt 145  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||    
T  47870719 gataagcatcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga---tgatcgaatactggagt 47870815  T
Q  146 cttgccggttagcaagtttgaatttgcctcattca 180  Q
    | ||| | |||||||||||||||||||| ||||||    
T  47870816 cctgctgtttagcaagtttgaatttgccccattca 47870850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 55797344 - 55797506
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  55797344 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaatgaatgcacctcattctgttgacacttgaataccagcgttcaaga 55797443  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||| ||| | ||| ||| | || ||||||||||||||||| ||||||| ||||||    
T  55797444 tgctaatcgaacactggtgtcctgctgcttggcaagtttgaatttgccccattcagtggtaag 55797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 21712132 - 21712284
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||| | ||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  21712132 tcggcagaagtccaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 21712231  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcatt 178  Q
    ||||||||| ||  | ||||| ||| | |||| ||||||||||||||| ||||    
T  21712232 tgttgatcgtatgttggagtcctgctgcttaggaagtttgaatttgccccatt 21712284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 4784966 - 4784811
Alignment:
Q  33 gactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgat 132  Q
    |||||||||||| ||| | | | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||    
T  4784966 gactccaacattcgatgaacattttaaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgttgat 4784867  T
Q  133 cgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||| || ||||| ||| | ||| ||||||||||||| |||||||||||| ||||    
T  4784866 cgaatgctggagtcctgcagtttaacaagtttgaatttacctcattcagagataag 4784811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 46816129 - 46815975
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| || ||||||||| ||||||| |||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||    
T  46816129 tcggcaagaatccaacattcgataagcctcttcaatgttggtattcaagtgtcatggaatgcacctcattcttttgacacttgaataccgtcattcaaga 46816030  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || | |||||||| | ||||| ||| | |||||||||||||||||||| ||||||    
T  46816029 tgcttatcgaatattggagtcctgctgcttagcaagtttgaatttgccccattca 46815975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 957056 - 956903
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||||||||||| |||| ||  |||||||| |||||||||||||||||| |||||||||||||||||||||| || | ||||||||    
T  957056 cggcaggaatccagcatttgataagcatcttgaatactggtattgaagtgtcaaggaatgcacatcattcttttgacacttgaatatcatcattcaagat 956957  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||| ||||||    
T  956956 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccattca 956903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 6282069 - 6281945
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||||||| | ||||||||||    
T  6282069 tggtattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcttgctgtttagcaagtt 6281970  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  6281969 tgaatttgccccattcagtggtaag 6281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 14330238 - 14330101
Alignment:
Q  33 gactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgat 132  Q
    ||||||| |||| ||||||| |||| ||   |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  14330238 gactccagcattcgataagcatcttgaataatggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagatgttgat 14330139  T
Q  133 cgaatactagagtcttgccggttagcaagtttgaattt 170  Q
     ||||| ||||||| ||| | |||| ||||||||||||    
T  14330138 agaatattagagtcctgctgtttaggaagtttgaattt 14330101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 36776120 - 36775967
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||||| | |||| ||  || ||||| ||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||    
T  36776120 cggcaggaatccaacattcgataaacatcttgaatacttgtattgaagtgtcaaagaatgcacctcattcttttgacacttgaacaccatcattcaagat 36776021  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||||||||||    
T  36776020 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgcctcattca 36775967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 38132716 - 38132576
Alignment:
Q  34 actccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatc 133  Q
    |||||||||||  |||||| |||| || || ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||    
T  38132716 actccaacattctataagcatcttgaatgccggtattcaagtgtcaaggaatgcacatcattcttttgacacttgaataccatcattcaagatgttaatc 38132617  T
Q  134 gaatactagagtcttgccggttagcaagtttgaatttgcct 174  Q
    | || || ||||| ||| | ||| |||||||||||||||||    
T  38132616 gtatgctggagtcctgctgcttaacaagtttgaatttgcct 38132576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 49791500 - 49791383
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  49791500 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 49791401  T
Q  164 tgaatttgcctcattcag 181  Q
    ||||||| || |||||||    
T  49791400 tgaatttaccccattcag 49791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 22437554 - 22437678
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| |  || ||||| ||| | ||||||||||    
T  22437554 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggaggctggagtcctgctgtttagcaagtt 22437653  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||  ||||||| ||||||    
T  22437654 tgaatttgctccattcagtggtaag 22437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 42886885 - 42887046
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    ||||| |||||||||||| ||| ||| | ||||| | |||||||||||||| ||| |||||||||||||||| |||||||||||||||| | || || ||    
T  42886885 cggcatgactccaacattcgatgagcattttaaatgatggtattcaagtgttaagaaatgcacctcattcttctgacacttgaataccatcatttaaaat 42886984  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |   |||||||| | ||||| ||| | ||||||||||||||||| || ||||||||||||||    
T  42886985 gccaatcgaatattggagtcctgctgtttagcaagtttgaatttaccccattcagaggtaag 42887046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 2773652 - 2773776
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||| |||| ||  | ||||| ||| | ||||||||||    
T  2773652 tggtattcaagtgtcaaggaatgcacctcattctttttacagttgaataccaacattcaaaatgttcatcggatgttggagtcctgctgtttagcaagtt 2773751  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||  ||||||| ||||||    
T  2773752 tgaatttgctccattcagtggtaag 2773776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 36499794 - 36499715
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  36499794 tatagtactagatttatctatagaaatagtaaatcccgccctacctgcttgtcgacgaacccaaccaagtaattcttctc 36499715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 14290002 - 14289901
Alignment:
Q  69 ttcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaat 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||| ||||||| ||  | |||| ||||||||||    
T  14290002 ttcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagatgttgatagaatattagagtcctgttgtttaggaagtttgaat 14289903  T
Q  169 tt 170  Q
    ||    
T  14289902 tt 14289901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 21170056 - 21170209
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| | || || | ||||||||||||||||||||||||||||||||||||||||| |||||||||| | || || ||    
T  21170056 cggcaggaatccagcattcgatgagcattttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacagttgaataccatcatttaaaat 21170155  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | | |||| || || ||||| ||| | |||||||||||||||||||| ||||||    
T  21170156 gctcatcgcatgctggagtcctgctgtttagcaagtttgaatttgccccattca 21170209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 34529360 - 34529236
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||  ||||| | |||| ||  | ||||| ||| | ||||||||||    
T  34529360 tggtattcaagtgttaaggaatgcacatcattcttttgacacttgaataccatcgttgcagatgctcatcggatgttggagtcctgctgtttagcaagtt 34529261  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| || ||||||    
T  34529260 tgaatttgcctcatttagtggtaag 34529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 55524696 - 55524617
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  55524696 tatagtactagatttatctatagaaatagtaaattccgccctacccgcttgtcaacgaacccaaccaagtaattcttctc 55524617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 37867160 - 37867250
Alignment:
Q  90 ctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||    
T  37867160 ctcattcctttgacacttgaataccagcgttcaagatgctgatcgaatactggagtcctgctgtttagcaagtttgaatttgccccattca 37867250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 49571755 - 49571861
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | || |||||| |||||| ||  | ||||| ||| | |||||||||||||    
T  49571755 tattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattaaagatgctgatcggatgttggagtcatgctgcttagcaagtttga 49571854  T
Q  167 atttgcc 173  Q
    |||||||    
T  49571855 atttgcc 49571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 241998 - 241885
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| | || || ||||| |||| || || ||||| ||| | |||||||||||||    
T  241998 tattcaagtgtcaaagaatgcacctcattcttttgacatttgaataccatcatttaaaatgttcatcgcatgctggagtcctgcggtttagcaagtttga 241899  T
Q  167 atttgcctcattca 180  Q
    ||||||| ||||||    
T  241898 atttgccacattca 241885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 49064640 - 49064781
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||| |||| |||||||| ||| |||| || | |||||||||||||||||||||||||||||||||||||| |||||||||  |  | || || |||||    
T  49064640 caggagtccagcatttgatgagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttggcacttgaatgtcgtcatttaaaatgtt 49064739  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttg 171  Q
     ||||||||| |||||| ||| | |||| |||||||||||||    
T  49064740 catcgaataccagagtcctgcagtttagaaagtttgaatttg 49064781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 51427753 - 51427640
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||  || || ||||| ||| | |||||||||||||    
T  51427753 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatctcatgctggagtcctgctgtttagcaagtttga 51427654  T
Q  167 atttgcctcattca 180  Q
    ||||||| ||||||    
T  51427653 atttgccccattca 51427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 43889065 - 43888941
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||||||| | ||| ||||||    
T  43889065 tggtatccaagtgccaaggaatgcatctcattcttttgacacttgaataccatctttcaagatgctcatcgcatgttggagtcttgctgtttaacaagtt 43888966  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || |||| |||||||||    
T  43888965 tgaatttaccccatttagaggtaag 43888941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 45246144 - 45246219
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||||||| |||||||||    
T  45246144 gtactagatttatctgtagaaatagtaaattcagccctacccgcttgtcgacgaatccaaccaagtaattcttctc 45246219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 49423320 - 49423197
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |  | ||||||||| | |||| || || ||||| ||  | ||| |||||||    
T  49423320 ggtattcaagtgtcaaggaatgcacctcattcttttgacaattgaatatcctcattcaagatgctcatcgcatgctggagtcctgttgtttatcaagttt 49423221  T
Q  165 gaatttgcctcattcagaggtaag 188  Q
    |||||| || ||||||| ||||||    
T  49423220 gaatttaccccattcaggggtaag 49423197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 49817493 - 49817442
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49817493 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 49817442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 10312625 - 10312675
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10312625 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 10312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 49817050 - 49817000
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49817050 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 49817000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 34152883 - 34152735
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||| ||||||||  ||| ||| |||| || | |||||||||||||||||  |||||| |   ||||||||||||||||||||||| | ||||||||||    
T  34152883 caggaatccaacatgcgatgagcatcttgaatgatggtattcaagtgtcaaaagaatgcgc---attcttttgacacttgaataccatcattcaagatgt 34152787  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | |||| || || ||||| ||| | ||||||||||||||||| || ||||||    
T  34152786 tcatcgcatgctggagtcatgctgtttagcaagtttgaatttaccccattca 34152735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 4785271 - 4785221
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  4785271 ggtattgaagtgtcaaggaatgcacctcattcttttaacacttgaatacca 4785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 17211622 - 17211672
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17211622 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacca 17211672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 24607086 - 24607136
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  24607086 ggtattgaagtgtcaaggaatgcacctcattcttttgactcttgaatacca 24607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 32937774 - 32937724
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  32937774 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttaaatacca 32937724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 22181572 - 22181645
Alignment:
Q  289 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||| ||||| |||||||||||||||| |||||  ||||||||||| |||||||| ||||||| |||||||    
T  22181572 actagatttatctatagaaatagtaaatccggcccttgccgcttgtcgatgaacccaaacaagttaatcttctc 22181645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 49423606 - 49423557
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  49423606 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaatacc 49423557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 37867159 - 37867100
Alignment:
Q  110 ataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||| ||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||    
T  37867159 ataccagcgttcaagatgctgatcgaatactggagtcctgctggttagcaagtttgaatt 37867100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 1043404 - 1043334
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  1043404 ttgacacttgaataccaacgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 1043334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 21169809 - 21169859
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  21169809 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 21169859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 24607411 - 24607461
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  24607411 ggtattaaagtgtcaaggaacggacctcattcttttgacacttgaatacca 24607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 28082892 - 28082822
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| ||||| ||| ||||||||||||    
T  28082892 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctgccgattaacaagtttgaatt 28082822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 40353255 - 40353396
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  |||||||| |    
T  40353255 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagtgttcaagagg 40353353  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
     | |||||||||| ||||| ||||| ||| |||||||||||||    
T  40353354 cttatcgaatactggagtcctgccgattaacaagtttgaattt 40353396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 6176797 - 6176937
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  6176797 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 6176895  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  6176896 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 6176937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 21016659 - 21016799
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  21016659 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 21016757  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  21016758 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 21016799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 25763250 - 25763335
Alignment:
Q  103 cacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||| | ||||||||| | | | ||||| || ||||| ||| | |||||||||||||||||||||||||||| ||||||    
T  25763250 cacttgaatacgagcgttcaagacgcttaccgaatgctggagtcatgctgcttagcaagtttgaatttgcctcattcagtggtaag 25763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 32937450 - 32937401
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  32937450 ggtattgaagtgtcaaggaatgtacctcattcttttgacacttcaatacc 32937401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 42886624 - 42886673
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  42886624 ggtattgaagtgtcaaggaatatacctcattcttttgacacttgaatacc 42886673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 49095470 - 49095330
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  |||||||| |    
T  49095470 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagtgttcaagagg 49095372  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  49095371 cttatcgaatactggagtcctgccgattaacaagtttgaatt 49095330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 957304 - 957254
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  957304 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaacacca 957254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 3393657 - 3393707
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||||    
T  3393657 ggtattgaagtgtcaaggaatgcatttaattcttttgacacttgaatacca 3393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 34153135 - 34153085
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||||||||    
T  34153135 ggtattgaagtgtcaaggaacggacctcattcttttgacatttgaatacca 34153085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 39589592 - 39589514
Alignment:
Q  91 tcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| |||||||||| |||| |||| | | ||||||| || ||||| | ||||||| ||||||||||||    
T  39589592 tcattcttttgacaattgaataccagcgttgaagacgcttatcgaatgctggagtcctaccggttaacaagtttgaatt 39589514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 55797398 - 55797328
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| |||| |||||||||||    
T  55797398 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattagtaagtttgaatt 55797328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 2773367 - 2773416
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  2773367 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 2773416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 36776368 - 36776319
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||||||||    
T  36776368 ggtattgaagtgtcaatgaatgaacctcattcatttgacacttgaatacc 36776319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 39589535 - 39589584
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaa 80  Q
    ||||||||| |||| |||||||||||| ||||||||||||||| ||||||    
T  39589535 aggactccagcattcgataagcgtcttcaacgctggtattcaattgtcaa 39589584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 18412962 - 18412994
Alignment:
Q  77 tcaaggaatgcacctcattcttttgacacttga 109  Q
    |||||||||||||||||||||||||||||||||    
T  18412962 tcaaggaatgcacctcattcttttgacacttga 18412994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 49571461 - 49571513
Alignment:
Q  63 ctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||||| |||||||||| |||| ||||||||||||||| | ||||||||||    
T  49571461 ctggtattgaagtgtcaagaaatgtacctcattcttttgatatttgaatacca 49571513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20901283 - 20901228
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag 81  Q
    ||||||||||||||||||| ||||||| |||| ||  |||||||| ||||||||||    
T  20901283 tcggcaggactccaacattcgataagcctcttgaatactggtattgaagtgtcaag 20901228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 56139566 - 56139495
Alignment:
Q  98 tttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  56139566 tttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 56139495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 14330191 - 14330261
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||   ||||||||| | ||||||| || ||||||| ||| ||| ||||||||||||    
T  14330191 ttgacacttgaataccattattcaagatgcttatcgaatgctggagtcttaccgtttaacaagtttgaatt 14330261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 34529347 - 34529428
Alignment:
Q  102 acacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    ||||||||||||||  |||||||||| | |||| || ||||| || ||||| ||| |||||||||| ||||| ||||||||||    
T  34529347 acacttgaataccattgttcaagatgctcatcgcatgctagattcatgccgtttaacaagtttgaa-ttgccccattcagagg 34529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 45940182 - 45940112
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  45940182 ttgacacttgaataccagcgttcaagacgcttatcgaatgatggagtcatgccgattaacaagtttgaatt 45940112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 49791777 - 49791735
Alignment:
Q  73 agtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||    
T  49791777 agtgtcaacgaatggacctcattcttttgacatttgaatacca 49791735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 34529645 - 34529596
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| || ||||||    
T  34529645 ggtattgaagtgtcaacgaatggacctcattcttttgacatttcaatacc 34529596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 25763201 - 25763249
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaag 74  Q
    |||||| ||||||| |||| |||||||||||| |||||| |||||||||    
T  25763201 tcggcatgactccagcattcgataagcgtcttgaacgctcgtattcaag 25763249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 99)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 13895486 - 13895324
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13895486 tcggcaggacttcaacattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13895387  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  13895386 tgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 13895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 51695537 - 51695375
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51695537 tcggcaggactccagcattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 51695438  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  51695437 tgctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 51695375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 11378580 - 11378423
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11378580 tcggcaggactccagaattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 11378481  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    || | |||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  11378480 tgataatcgaatactagagtcctgctggttagcaagtttgaatttgccccattcagag 11378423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 34692891 - 34692749
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34692891 ggcaggactccaacattcgataagcgtcttggacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatg 34692792  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||    
T  34692791 ttgatcgaatactggagtcctgctggttagcaagtttgaattt 34692749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 43477654 - 43477809
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  43477654 tcggcaggactccagcattcgataagcgtcttgaacgctggtattcaagtctcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 43477753  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    || |||||||||||| ||||| ||| ||||||||| |||||||||||| |||||||    
T  43477754 tgctgatcgaatactggagtcctgctggttagcaaatttgaatttgccccattcag 43477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 2268098 - 2267936
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2268098 tcggcagaactccaacattcgataagcctcttaaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 2267999  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||  | |||||||||||||||||||| ||||||| ||||||    
T  2267998 tgctgatcgaatactggtgtcctgttgcttagcaagtttgaatttgccccattcagtggtaag 2267936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 49218339 - 49218177
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49218339 tcggtaggactccaacattcgataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 49218240  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| |||||  || | ||| |||||||||||||| | ||||||| ||||||    
T  49218239 tgctgatcgaatactggagtcccgctgtttaacaagtttgaatttgtcccattcagtggtaag 49218177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 49610777 - 49610939
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  49610777 tcggcaggactccagcatccgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 49610876  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||| |||||| |||||| ||| || ||||||||||||||||||| ||||||| ||||||    
T  49610877 tgctgattgaataccagagtcctgctggatagcaagtttgaatttgccccattcagtggtaag 49610939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 50998003 - 50998164
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  50998003 tcggcaggactccagcattcgataagcgtcttgaacactggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccaacattcaaga 50998102  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaa 187  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| |||||    
T  50998103 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaa 50998164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 44928079 - 44928237
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  44928079 tcggaaggactccaacattcgataagcatcttgaacgctggtattcaagtgtcgaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 44928178  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    || |||||||||||| ||||| ||| ||||||||||||| || ||||| ||||||||||    
T  44928179 tgctgatcgaatactggagtcctgctggttagcaagtttaaagttgccccattcagagg 44928237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 24701875 - 24701728
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24701875 tcggcaggactccagcattcaataagcgtcttcaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 24701776  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    || |||||||| | | ||||| ||| | ||||||||||||||||||||    
T  24701775 tgctgatcgaaaaatggagtcctgctgcttagcaagtttgaatttgcc 24701728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 36135622 - 36135782
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||| |||||| |||| ||| ||| |||| |||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36135622 tcggcagaactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcagctcattcttttgacacttgaataccagcgttcaaga 36135721  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggta 186  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||||||||||| ||||    
T  36135722 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgcctcattcagtggta 36135782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 44835087 - 44834935
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  44835087 gcaggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagatgt 44834988  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    |||||| ||  | ||||||||  | |||||||||||||||||||| |||||||    
T  44834987 tgatcgtatgttggagtcttgttgcttagcaagtttgaatttgccccattcag 44834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 34050342 - 34050504
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34050342 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 34050441  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  34050442 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 34050504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 49139658 - 49139496
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49139658 tcggcaggactccagtattcgatgagcatcttagacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 49139559  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | ||||||||||||||||||||  |||||| ||||||    
T  49139558 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccctattcagtggtaag 49139496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 54391057 - 54391219
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54391057 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 54391156  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  54391157 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 54391219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 39416541 - 39416388
Alignment:
Q  35 ctccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcg 134  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39416541 ctccaacatttgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcg 39416442  T
Q  135 aatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
     ||  | ||||| | | | ||| |||||||||||||||| ||||||| ||||||    
T  39416441 tatgttggagtcctactgcttaacaagtttgaatttgccccattcagtggtaag 39416388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 42383669 - 42383814
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  42383669 ggcaggactccaacattcgataagcctcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatg 42383768  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
     |||||||||| | ||||| ||| | |||||| |||||||||||||    
T  42383769 ctgatcgaatattggagtcctgcggcttagcatgtttgaatttgcc 42383814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 47066302 - 47066449
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  47066302 tcggcaggactccaacattcgataagcatcttgaatgttggtattcaagtgtgaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 47066401  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||||||||| ||  | ||||||||| | || |||||||||||||||||    
T  47066402 tgttgatcgtatgttggagtcttgctgcttcgcaagtttgaatttgcc 47066449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 2646480 - 2646318
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2646480 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 2646381  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| || || ||| | |||||||||||||||||||| ||||||| ||||||    
T  2646380 tgcttatcgaatactggattcctgctgcttagcaagtttgaatttgccccattcagtggtaag 2646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 25576194 - 25576032
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||    
T  25576194 tcggcatgactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcaatcttttgacacttgaatatcatcattcaaga 25576095  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||| |||| || ||||||    
T  25576094 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgccccatttagtggtaag 25576032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 53826599 - 53826469
Alignment:
Q  50 agcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttg 149  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| | ||||||||    
T  53826599 agcgtcttgaacactggtattcaagtgtcaagtaatgcacctcattcttttgacacttgaataccagcgttcaaaatgctgatcgaatattggagtcttg 53826500  T
Q  150 ccggttagcaagtttgaatttgcctcattca 180  Q
    | | ||||||||||||| |||||| ||||||    
T  53826499 ctgcttagcaagtttgagtttgccccattca 53826469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 36720936 - 36720783
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||||||||||||| ||||||| |||| ||   | |||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||    
T  36720936 cggcaggactccaacattcgataagcatcttgaataattgtattcaagtgtcaaggaatgcacctcattcttttgacacttaaatatcatcattcaagat 36720837  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||||||| | ||||| | | | ||||||||||||||||| |||||||||    
T  36720836 gttgatcgaatattggagtcctacagtttagcaagtttgaatttacctcattca 36720783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 34471675 - 34471522
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||||||| |||| ||  || ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34471675 cggcaggaatccagcattcgataagcatcttgaatactagtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 34471576  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||| ||  | ||||| ||| | |||||||||||||||||||| ||||||    
T  34471575 gttgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccattca 34471522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 46346171 - 46346058
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||| || || ||||| ||| | |||||||||||||    
T  46346171 tattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcggatgctggagtcctgctgcttagcaagtttga 46346072  T
Q  167 atttgcctcattca 180  Q
    ||||||| ||||||    
T  46346071 atttgccccattca 46346058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 46413920 - 46413767
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||||||| |||| ||   |||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||    
T  46413920 cggcaggaatccaacattcgataagcatcttgaataatggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattgaagat 46413821  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
     || |||| || || ||||| ||| | |||||||||||||||||||| ||||||    
T  46413820 attcatcgcatgctggagtcctgcggtttagcaagtttgaatttgccccattca 46413767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 3494633 - 3494471
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| | | |||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||    
T  3494633 tcggcaggactccagtattcgatgatcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagtgtttaaga 3494534  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | ||  |||||||||||||||| ||||||| ||||||    
T  3494533 tgctgatcgaatactggtgtcctgctgcttgacaagtttgaatttgccccattcagtggtaag 3494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 52568985 - 52568851
Alignment:
Q  54 tcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccgg 153  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||  | ||||| ||  |     
T  52568985 tcttaaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgaatgttggagtcatgttgt 52568886  T
Q  154 ttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||||||||| | ||||||| ||||||    
T  52568885 ttagcaagtttgaatttgtcacattcagtggtaag 52568851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 34646814 - 34646653
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| || || | |||| || | ||||||||||||||||| |||||||||||||||||||||||||||||||||| | || || ||    
T  34646814 cggcaggaatccaacattcgaaaaacatcttgaatgatggtattcaagtgtcaacgaatgcacctcattcttttgacacttgaataccatcatttaaaat 34646715  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |   |||||||||| ||||| ||| | ||||||||||||||||| || |||| |||||||||    
T  34646714 gcgcatcgaatactggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaag 34646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 41578525 - 41578686
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| |||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  41578525 cggcaggaatccagcattcgatgagcctcttgaatgctgggattcaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcattcaagat 41578624  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||  ||  | ||||| ||| | ||||||||||||||||| |  ||||||| ||||||    
T  41578625 gttgatcagatgttggagtcatgctgcttagcaagtttgaattttcgccattcagtggtaag 41578686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 39649091 - 39649170
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39649091 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 39649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 2429107 - 2429268
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||  ||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||  |||||||| || | ||||||||    
T  2429107 cggcaggaatccagcatgcgatgagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgagccttgaatatcatcattcaagat 2429206  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| |  || ||||| ||| | |||||||||||||||||||||||||| | ||||||    
T  2429207 gctcatcggacgctggagtcctgctgtttagcaagtttgaatttgcctcattctgtggtaag 2429268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 51012849 - 51012725
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  51012849 tggtattcaagtgtcaaggaatgcacctcgttcttttgacacttgaatgccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 51012750  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||| ||||||    
T  51012749 tgaattttccccattcagtggtaag 51012725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 55268657 - 55268501
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||||||| ||||  ||| ||| |||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |    
T  55268657 caggactccgacatccgatgagcatctgcaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgct 55268558  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggta 186  Q
     |||| ||    ||||| ||| | |||||||||||||||||||| ||||||| ||||    
T  55268557 catcggatgtcggagtcctgctgtttagcaagtttgaatttgccccattcagtggta 55268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 15041348 - 15041427
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15041348 tatagtactggatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 15041427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 49274026 - 49274169
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||| ||||||||| ||||| | |||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |    
T  49274026 caggaatccaacattcgataaacatcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgct 49274125  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||| | ||  | ||||  ||| | ||||||||||||||||||||    
T  49274126 gataggatgttggagttctgctgtttagcaagtttgaatttgcc 49274169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 10052985 - 10052832
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| ||||  |||||| |||| ||  |||||||| ||||||||||||||||| ||| |||||||||||| |||||||||   ||||||||    
T  10052985 cggcaggaatccagcattcaataagcatcttgaatactggtattgaagtgtcaaggaatgcatctcgttcttttgacacctgaataccataattcaagat 10052886  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||| ||  | ||||| ||| | ||| |||||||||||||||||||||||    
T  10052885 gttgatcggatgttggagtcctgctgtttaacaagtttgaatttgcctcattca 10052832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 19452746 - 19452585
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| ||| ||||  || |||| |||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  19452746 cggcaggaatccagcatgtgatgtgcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacactttaataccatcattcaagat 19452647  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | || | ||  |  |||| ||| | ||||||||| |||||||||||||||||| ||||||    
T  19452646 gctcattggattatgcagtcctgctgtttagcaagtctgaatttgcctcattcagtggtaag 19452585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 42322953 - 42322836
Alignment:
Q  71 caagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||| |||||||||||||    
T  42322953 caagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcgtgctgtttaacaagtttgaattt 42322854  T
Q  171 gcctcattcagaggtaag 188  Q
     || |||| |||||||||    
T  42322853 accccatttagaggtaag 42322836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 46403618 - 46403719
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46403618 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 46403717  T
Q  126 tg 127  Q
    ||    
T  46403718 tg 46403719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 41804559 - 41804683
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  | ||||||||| | |||| || || ||||  ||| | ||| ||||||    
T  41804559 tggtattcaagtgtcaaggaatgctcctcattcttttgacacttgaataccgtcattcaagatgctcatcggatgctggagttatgctgtttaacaagtt 41804658  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||| ||||||||| ||||||    
T  41804659 tgaatttgtctcattcagtggtaag 41804683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 34085953 - 34086032
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  34085953 tatagtactagatttatctatagaaatagtaaatcccaccctacccgcttgtcgacgaacccaaccaagtaattcatctc 34086032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 45100074 - 45099913
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| | || || | |||||||||||||||||||||||||||||||||||||||||||||||||| | | || || ||    
T  45100074 cggcaggaatccagcattcgatgagcatttttaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacaatcatttaaaat 45099975  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| || || ||||| ||| | |||||||||||||||||  | ||||||| ||||||    
T  45099974 gctcatcgcatgctggagtcctgctgtttagcaagtttgaatttatcccattcaggggtaag 45099913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 7246753 - 7246821
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcg 134  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7246753 gtattcaactgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcg 7246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 55206443 - 55206322
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||  ||||| | |||| || |  ||||| ||| | |||||||||||||    
T  55206443 tattcaagtgacaaggaatgcatctcattcttttgacacttgaataccatcgttgcagatgctcatcggatgcaggagtcctgctgtttagcaagtttga 55206344  T
Q  167 atttgcctcattcagaggtaag 188  Q
    |||| || ||||||| ||||||    
T  55206343 attttccccattcagtggtaag 55206322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 35063887 - 35063812
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||| |||||||||    
T  35063887 gtactagatttatctgtagaaatagtaaatccagccctagccgcttgtcgatgaatccaaccaagtaattcttctc 35063812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 14632101 - 14632218
Alignment:
Q  63 ctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagt 162  Q
    |||||||| ||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| | |||| |   | ||||| |||   |||||||||    
T  14632101 ctggtattgaagtgtcaaggaatgcaccccattcttttgacaattgaataccatcattcaagatgctcatcgcaagttggagtcctgctatttagcaagt 14632200  T
Q  163 ttgaatttgcctcattca 180  Q
    ||||||||||| ||||||    
T  14632201 ttgaatttgccccattca 14632218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 4003691 - 4003616
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttg 101  Q
    |||||||||||||| |||| ||| ||| |||| |||  ||||||||||||||||||||||||||||||||||||||    
T  4003691 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttg 4003616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 7954575 - 7954626
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7954575 tggtaatcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 7954626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 19867696 - 19867625
Alignment:
Q  289 actagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||| ||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  19867696 actagatttatctatagaaattgtaaatc--gccctacccgcttgtcgacgaacccaaccaagtaattcttctc 19867625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 27187685 - 27187735
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27187685 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 27187735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 20375732 - 20375685
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  20375732 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 20375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 35996420 - 35996349
Alignment:
Q  291 tagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||| ||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||| ||| |||||    
T  35996420 tagatttatctatagaaatagtaaatcctgccctagccgcttttcgacgaacccaaccaagtaatttttctc 35996349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 3494579 - 3494649
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||||| ||||||||||||||||    
T  3494579 ttgacacttgaataccattgttcaagatgatcatcgaatactggagtcctgccgattagcaagtttgaatt 3494649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 15637361 - 15637410
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  15637361 gtattgaagtgtcaaggaatgcacctcattcttttgacacttcaatacca 15637410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 7955024 - 7955072
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7955024 ggtattgaagtgtcaaggaatgtacctcattcttttgacacttgaatac 7955072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 51015955 - 51016042
Alignment:
Q  93 attcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||||||||| || ||||||    
T  51015955 attcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaagtttgaatttaccccattca 51016042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 2428859 - 2428909
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  2428859 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 2428909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 8633212 - 8633162
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  8633212 ggtattgaagtgtcaatgattgcacctcattcttttgacacttgaatacca 8633162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 18441114 - 18441164
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  18441114 ggtattgaagtgtcaagggatgcacctcattattttgacacttgaatacca 18441164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 19486188 - 19486238
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  19486188 ggtattgaagtgtcaagggatgcacctcattattttgacacttgaatacca 19486238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 2646356 - 2646496
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||| ||||  ||| ||||||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  2646356 gcaggaatccagtattcgataagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 2646454  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  2646455 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 2646496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 6754575 - 6754624
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  6754575 gtattgaagtgttaaggaatgaacctcattcttttgacacttgaatacca 6754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 25887457 - 25887408
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  25887457 gtattgaagtgtcaagaaatgcacctcattcttttgacacttcaatacca 25887408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 34050466 - 34050326
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  34050466 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 34050368  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  34050367 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 34050326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 34647114 - 34647065
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34647114 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 34647065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 42323237 - 42323188
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  42323237 ggtattgaagtgtcaatgaatgtacctcattcttttgacacttgaatacc 42323188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 43570283 - 43570332
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  43570283 gtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 43570332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 49273771 - 49273820
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  49273771 ggtattaaagtgtcaatgaatggacctcattcttttgacacttgaatacc 49273820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 54391181 - 54391041
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  54391181 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 54391083  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  54391082 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 54391041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 34471922 - 34471874
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34471922 gtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 34471874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 42949754 - 42949802
Alignment:
Q  62 gctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaa 110  Q
    |||||||||||||||||||||||||||||||||| | || |||||||||    
T  42949754 gctggtattcaagtgtcaaggaatgcacctcattttgttaacacttgaa 42949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 8632886 - 8632839
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  8632886 tattgaagtgtcaaggaatgtacctcattcttttgacacttcaatacc 8632839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 36135746 - 36135593
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||| |||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||  |  ||||| || |||||||||||||||  ||||||||||    
T  36135746 gcaggacaccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgagctgcattcctt-gacacttgaataccattgttcaagatg 36135648  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
     | ||||||| || ||||  ||||| ||| |||||||||| ||||||||| |||||    
T  36135647 ctcatcgaatgctggagttctgccgattaacaagtttgaa-ttgcctcatccagag 36135593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 45100312 - 45100265
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  45100312 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaata 45100265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 4003637 - 4003707
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  4003637 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaatt 4003707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 6464194 - 6464144
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||| |||||||| |||||||||||||| |||||||||||||    
T  6464194 ggtattaaagtgttaaggaatgaacctcattcttttgtcacttgaatacca 6464144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 10053226 - 10053184
Alignment:
Q  72 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  10053226 aagtgtcaatgaatggacctcattcttttgacacttgaatacc 10053184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 11378526 - 11378596
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  11378526 ttgacacttgaataccagcgttcaagacgcttatcgaattctggagtcctgccgattaacaagtttgaatt 11378596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 41578277 - 41578327
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||||    
T  41578277 ggtattgaagtgtcaaagaatggacctcattcttttgacatttgaatacca 41578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 46346459 - 46346409
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  46346459 ggtattgaagtgtcaaggaatggacctcattcgtttgacatttgaatacca 46346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 46403672 - 46403602
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| ||||||||||||    
T  46403672 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaatt 46403602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 41804274 - 41804323
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  41804274 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 41804323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 46405725 - 46405782
Alignment:
Q  131 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  46405725 atcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 46405782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 49139534 - 49139674
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  ||  ||||||    
T  49139534 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtctaagatg 49139632  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  49139633 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 49139674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 51015649 - 51015698
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| ||||||    
T  51015649 ggtattgaagtgtcaaggaatgaacctcattcttttcacacttaaatacc 51015698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 55206731 - 55206682
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  55206731 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 55206682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 51013125 - 51013077
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  51013125 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatac 51013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 51015956 - 51015880
Alignment:
Q  93 attcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||| ||||| ||| ||||||||||||    
T  51015956 attcttttgacacttgaataccatcattcaagatgctcatcgcatgttggagtcctgccgtttaacaagtttgaatt 51015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 7246466 - 7246513
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  7246466 ggtattgaagtgttaaggaatggacctcattcttttgacatttgaata 7246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 47066353 - 47066286
Alignment:
Q  102 acacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||| ||||||||| | |||||||  | ||||| ||||| ||| ||||||||||||    
T  47066353 acacttgaataccaacattcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 47066286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 27187817 - 27187851
Alignment:
Q  154 ttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||||| |||||||||||||||||    
T  27187817 ttagcaagtttgaatttacctcattcagaggtaag 27187851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 43477708 - 43477638
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||| |||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  43477708 ttgagacttgaataccagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 43477638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 49610831 - 49610761
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | |||| || || ||||| ||||| ||| ||||||||||||    
T  49610831 ttgacacttgaataccagcgttcaagacgcttatcggatgctggagtcctgccgattaacaagtttgaatt 49610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 50998057 - 50997987
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  50998057 ttgacacttgaataccagtgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 50997987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 33449001 - 33448952
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| |||||||||  |||| |||| |||||||||||||||||||||||    
T  33449001 gtattgaagtgtcaataaatggaccttattcttttgacacttgaatacca 33448952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 46414181 - 46414132
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||| | ||||| ||||||||||||||||| |||||||||    
T  46414181 ggtattgaagtgtcgatgaatggacctcattcttttgacatttgaatacc 46414132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 43570558 - 43570626
Alignment:
Q  105 cttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||||||||||||    
T  43570558 cttgaataccatcattcaagatgctcatcgcatgctggagtcatgctgtttagcaagtttgaatttgcc 43570626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 52569256 - 52569208
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||| ||||| ||||| ||||||||||| ||||||||    
T  52569256 ggtattgaagtgtcaacgaatggacctcgttcttttgacatttgaatac 52569208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 44051054 - 44051213
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  44051054 gcagaactccagcattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgc 44051153  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  44051154 tgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 44051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 42168561 - 42168408
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  42168561 tcggcagaactccagcatttgataagcgtcttgaacgctgatattcaattgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaaa 42168462  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattc 179  Q
    || |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  42168461 tgctgatcgaatactagagtcttgctgcttagcaagtttgaatttgcctcattc 42168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 41275681 - 41275840
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||||||| |  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41275681 gcaggactctagtattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgt 41275780  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||| ||||| ||  |||||||||||||||||||||| ||||||| ||||||    
T  41275781 tgatcgaatactggagtcctgttggttagcaagtttgaatttgccccattcagtggtaag 41275840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 28705743 - 28705589
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28705743 tcggcaggactccaacattcgacaagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 28705644  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || |||||||||| | ||||||||| | |||||||||||||||||||| ||||||    
T  28705643 tgctgatcgaatattggagtcttgctgcttagcaagtttgaatttgccccattca 28705589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 24861954 - 24862116
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24861954 tcggcaggactccaacattcgataatcgtcttgaacgctagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 24862053  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||  ||||  ||  ||||||||||||||||||||||||||| || ||||||    
T  24862054 tgctgatcgaatacaggagtactgttggttagcaagtttgaatttgcctcatttagtggtaag 24862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 22549690 - 22549852
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  22549690 tcggcaggactccagcattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttgaaga 22549789  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
     | |||||||||||| ||||| ||  |||||||||||||||| || || ||||||| ||||||    
T  22549790 cgctgatcgaatactggagtcatgttggttagcaagtttgaactttccccattcagtggtaag 22549852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 15031927 - 15031765
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| ||||  || ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15031927 tcggcaggactccagcattcaatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 15031828  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  15031827 tgctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccacattcagtggtaag 15031765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 484861 - 484699
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  484861 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 484762  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||  ||| | |||||||||||||||||||| ||||||| ||||||    
T  484761 tgcttatcgaatactggagttctgctgcttagcaagtttgaatttgccccattcaggggtaag 484699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 26452923 - 26453037
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26452923 tcggcaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 26453022  T
Q  126 tgttgatcgaatact 140  Q
    || |||| |||||||    
T  26453023 tgctgatagaatact 26453037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 40415869 - 40416013
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||| ||||||||| ||||||| |||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  40415869 tcggcaggagtccaacattcgataagcatcttgaattctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 40415968  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||    
T  40415969 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaattt 40416013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 38033522 - 38033373
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 130  Q
    |||||||||||||| ||||||| |||| ||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  38033522 aggactccaacattcgataagcatcttgaaaaatggtattaaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgatg 38033423  T
Q  131 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||| ||  | ||||||||  | |||||||||||||||||||||| ||||    
T  38033422 atcggatgttggagtcttgttgtttagcaagtttgaatttgcctccttca 38033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 33799353 - 33799241
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |||||||    
T  33799353 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgttaaggaatgcacctcattcttttgacacttgaataccgtcattcaaga 33799254  T
Q  126 tgttgatcgaata 138  Q
    || ||||||||||    
T  33799253 tgctgatcgaata 33799241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 18439891 - 18439732
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||| ||||||||| ||| ||| |||| || | |||||||||||||||||  |||| |||||||||||||||||||||||||||| | ||||||||||    
T  18439891 gcaggaatccaacattcgatgagcctcttgaatgttggtattcaagtgtcaaataatgtacctcattcttttgacacttgaataccatcattcaagatgt 18439792  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||| ||  |  |||||||| | |||||||||||||||||||| ||||||| ||||||    
T  18439791 tgatcggatgttgcagtcttgctgcttagcaagtttgaatttgccccattcagtggtaag 18439732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 43637358 - 43637220
Alignment:
Q  34 actccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatc 133  Q
    ||||||||||| ||||||| |||| || |||| ||||||||||||||| |||||||||||||| ||||||||| |||||||  | ||||||||| | |||    
T  43637358 actccaacattcgataagcctcttgaatgctgatattcaagtgtcaagaaatgcacctcattc-tttgacactagaataccgtcattcaagatgctcatc 43637260  T
Q  134 gaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||||| | ||||| ||| | ||||||||||||||||||||    
T  43637259 gaatattggagtcctgcagtttagcaagtttgaatttgcc 43637220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 42604104 - 42604228
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| | |||| ||    ||||| || || ||||||||||    
T  42604104 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgctcatcggatgtcggagtcctgtcgtttagcaagtt 42604203  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| |||| || ||||||    
T  42604204 tgaatttgccccatttagtggtaag 42604228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 34277138 - 34277059
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  34277138 tatagtactagatttatatatagaaatagtaaatcccgctctacccgcttgtcgacgaacccaaccaagtaattcttctc 34277059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 40703004 - 40703138
Alignment:
Q  54 tcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccgg 153  Q
    ||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||  | ||| | || | || || ||||| ||| |     
T  40703004 tcttaaacaatggtatttaagtgtcaatgaatgcacctcattcttttgacacttgaataccatcgttgcatatgctcattggatgctggagtcctgctgt 40703103  T
Q  154 ttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||||||||||| ||||||| ||||||    
T  40703104 ttagcaagtttgaatttgccccattcagtggtaag 40703138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 41017351 - 41017288
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcac 89  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  41017351 tcggcaggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcac 41017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 41856530 - 41856410
Alignment:
Q  68 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||  | |||  || || ||||| ||  | ||||||||||||||    
T  41856530 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaatatactcatcagatgctggagtcctgttgtttagcaagtttgaa 41856431  T
Q  168 tttgcctcattcagaggtaag 188  Q
    ||| || ||||||| ||||||    
T  41856430 ttttccccattcagtggtaag 41856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 28167439 - 28167559
Alignment:
Q  68 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||| |||  || || ||||| | |   ||| ||||||||||    
T  28167439 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgttcatcacatgctggagtcctactatttaacaagtttgaa 28167538  T
Q  168 tttgcctcattcagaggtaag 188  Q
    ||| || ||||||| ||||||    
T  28167539 tttaccccattcaggggtaag 28167559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 16576024 - 16576074
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16576024 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 16576074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 2417622 - 2417665
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacactt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2417622 tggtattcaagtgtcaaggaatgcacctcattcttttgacactt 2417665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 16576349 - 16576399
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16576349 ggtattcaagtgtcaaggaattcacctcgttcttttgacacttgaatacca 16576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 41275732 - 41275649
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    ||||||||||||||||| ||||||||| | | |||||||||||||||| ||| | ||| |||||||||| ||||||||| |||||    
T  41275732 ttgacacttgaataccagcgttcaagacgcttatcgaatactagagtcctgctgattaacaagtttgaa-ttgcctcatccagag 41275649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 18440141 - 18440091
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  18440141 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 18440091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 44942927 - 44942877
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  44942927 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 44942877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 484807 - 484877
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| ||||||||||||    
T  484807 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaatt 484877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 37780512 - 37780562
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||||||    
T  37780512 ggtattaaagtgtcaacgaatggacctcattcttttgacatttgaatacca 37780562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 22549810 - 22549674
Alignment:
Q  33 gactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttga 131  Q
    |||||||  ||| ||| |||||||| ||||||||||||||||||||||  |||||     ||||| || ||||||||||||||| |||||||||   | |    
T  22549810 gactccagtattcgatcagcgtcttcaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagcgttcaagacactta 22549712  T
Q  132 tcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||| || ||||| ||||| ||| ||||||||||||    
T  22549711 tcgaatgctggagtcctgccgattaacaagtttgaatt 22549674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 40702729 - 40702778
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  40702729 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 40702778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 41363975 - 41363911
Alignment:
Q  119 ttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    |||||||||||||||| ||  | ||||| ||| | |||||||||||||||||||||||| |||||    
T  41363975 ttcaagatgttgatcggatgttggagtcctgctgtttagcaagtttgaatttgcctcatccagag 41363911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 15031873 - 15031943
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | || |||| || ||||| ||||| ||| ||||||||||||    
T  15031873 ttgacacttgaataccattgttcaagatgctcattgaatgctggagtcctgccgattaacaagtttgaatt 15031943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 26452977 - 26452907
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| || ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  26452977 ttgacacttgaatatcagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 26452907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 41017297 - 41017367
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | |||||||  | ||||| ||||| ||| ||||||||||||    
T  41017297 ttgacacttgaataccagcgttcaagacgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 41017367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 41856811 - 41856769
Alignment:
Q  72 aagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||    
T  41856811 aagtgtcaacgaatggacctcattcttttgacatttgaatacc 41856769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 19242007 - 19241959
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    ||||| |||||||||  |||| ||||||||||||||| |||||||||||    
T  19242007 gtattgaagtgtcaataaatgaacctcattcttttgaaacttgaatacc 19241959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 19315191 - 19315143
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    ||||| |||||||||  |||| ||||||||||||||| |||||||||||    
T  19315191 gtattgaagtgtcaataaatgaacctcattcttttgaaacttgaatacc 19315143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 31171662 - 31171614
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||| |||||||| |||||||||||||||||||||| | || |||||||    
T  31171662 tattgaagtgtcacggaatgcacctcattcttttgatagttcaatacca 31171614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 2394 - 2556
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| ||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  2394 tcggtaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 2493  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  2494 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 2556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 2448 - 2378
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| | ||| ||| ||||||||||||    
T  2448 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctaccgattaacaagtttgaatt 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 34141469 - 34141631
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| ||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  34141469 tcggtaggactccagcattcgataaacgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagcgttcaaga 34141568  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  34141569 tgttgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 34141631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 45362856 - 45362694
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||| ||||| |||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45362856 tcggcaggtctccagcattcgataagcgtatggaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgctcaaga 45362757  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |  |||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  45362756 tactgatcgaatattggagtcttgctggttagcaagtttgaatttgcctcattcagtggtaag 45362694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 28978806 - 28978651
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  28978806 tcggcaggactccaacattcgataagcgtcttgcacgctggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaataccaccgttcaaga 28978707  T
Q  126 tgttgatcgaa-tactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || |||||||| |||||||||| ||  ||||||||| |||||||||||| ||||||    
T  28978706 tgctgatcgaattactagagtcctgttggttagcaaatttgaatttgccccattca 28978651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 17183820 - 17183974
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |    
T  17183820 tcggcaggactccagcattcgataatcttcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttcacacttgaataccagcgttcaaaa 17183919  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||    
T  17183920 tgatgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattca 17183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 13920909 - 13921071
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13920909 tcggcaggactccagtattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 13921008  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |  |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  13921009 ttctgatcgaatactggggtcctgctgcttagcaagtttgaatttgccacattcagtggtaag 13921071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 30361120 - 30361275
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||| |||| |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30361120 tcggtaggactccaatatttaataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 30361219  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    ||||||||| ||  | ||||||||| | |||||||||||||||||||| |||||||    
T  30361220 tgttgatcgtatgttggagtcttgctgtttagcaagtttgaatttgccccattcag 30361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 10523672 - 10523834
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| ||||||||| |||| |||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  10523672 tcggtaggactccagcattcgataagcgtcttgaacacttgtattcaagtgtcaagtaatgcacctcattcttttgacacttgaataccagcgttcaaga 10523771  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | || |||| |||||||||||| ||||||| ||||||    
T  10523772 tgctgatcgaatactggtgtcctgctgcttggcaattttgaatttgccacattcagtggtaag 10523834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 17839913 - 17840075
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| ||| | | |||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  17839913 tcggcaggactccagcattcgatgaacatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgaaacttgaataccagcgttcaaga 17840012  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  17840013 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 17840075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 9366685 - 9366561
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  9366685 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgctcatcgaatactggagtcctgctgcttagcaagtt 9366586  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  9366585 tgaatttgccccattcagtggtaag 9366561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 20378634 - 20378487
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  20378634 tcggcaggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatccttcaaga 20378535  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    || |||||| ||  | ||||  ||| | ||||||||||||||||||||    
T  20378534 tgctgatcgtatgttggagttctgctgcttagcaagtttgaatttgcc 20378487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 41218217 - 41218379
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| ||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  41218217 tcggcatgactccaacattcgataagcatcttgaatgctggtattcaagtgtcaagaaatgcacctcattcttttgacacttgaataccatcattcaaga 41218316  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||| ||  | ||||| ||| | ||||||||||||||||| || ||||||| ||||||    
T  41218317 tgatgatcgtatgttggagtcctgctgcttagcaagtttgaattttccccattcagtggtaag 41218379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 34157410 - 34157554
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||||||||||||| ||| ||| |||| |||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||     
T  34157410 gcaggactccaacattcgatgagcatcttgaacaatggtattcaagtgttaaggaatgcaccttattcttttgacacttgaataccagcgttcaagatgc 34157509  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    |||||||||||| | ||| ||| | ||||||||||||||||||||    
T  34157510 tgatcgaatactggtgtcctgctgcttagcaagtttgaatttgcc 34157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 39476844 - 39476689
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||| ||||||| |||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||    
T  39476844 tcggtaggactccaacattcgataagcatcttgaatgttggtattcaagtgtcaaggaatgtacctcattcttttgacacttgaataccatcatttaaga 39476745  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    ||||||||| ||  | ||||| ||| | |||||||||||||||||||| |||||||    
T  39476744 tgttgatcgtatgttggagtcctgctgcttagcaagtttgaatttgccccattcag 39476689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 42683058 - 42683179
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||  | |||||||||||||    
T  42683058 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgctgatagaatactggagtcctgttgtttagcaagtttga 42683157  T
Q  167 atttgcctcattcagaggtaag 188  Q
    ||||||| |||| || ||||||    
T  42683158 atttgccccatttagtggtaag 42683179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 48220347 - 48220258
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48220347 tcggcaagactccaacatttgataagtgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 48220258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 20565400 - 20565524
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||| | || |||||||    
T  20565400 tggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaagatgctgatcgaatgctggtgtcctgctgcttggcaagtt 20565499  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  20565500 tgaatttgccccattcagtggtaag 20565524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 48271258 - 48271417
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||| |||| |||| ||| ||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  48271258 gcaggaatccagcattcgatgagcctcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgc 48271357  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||| ||  | ||  | ||| | |||||||||||||||||||||||||||| ||||||    
T  48271358 tgatcggatgttggacccctgctgtttagcaagtttgaatttgcctcattcagtggtaag 48271417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 21186898 - 21186745
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  21186898 cggcaggaatccagcattcgatgagcctcttgaatgctggtattcaagtgtcaaggaatgaacctcattcttttgacacttgaataccatcattcaagat 21186799  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | |||||| ||  | ||||| ||| | |||||||||||||||||| | ||||||    
T  21186798 gctgatcggatgttggagtcctgctgcttagcaagtttgaatttgtcccattca 21186745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 18238172 - 18238323
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||||||||||||||  |||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||     
T  18238172 gcaggactccaacattcaataagcctcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcattattcaagatgc 18238271  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||| || ||  | ||||| ||| | |||||||||||||||||||| ||||||    
T  18238272 tgaacgtatgttggagtcctgctgcttagcaagtttgaatttgccccattca 18238323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 20877613 - 20877490
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||  | ||||| ||| | |||||||||||    
T  20877613 ggtattcaaatgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctgatcgtatgttggagtcctgctgtttagcaagttt 20877514  T
Q  165 gaatttgcctcattcagaggtaag 188  Q
    |||||| ||||||| |||||||||    
T  20877513 gaatttacctcatttagaggtaag 20877490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 26601376 - 26601273
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 130  Q
    |||||||||||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  26601376 aggactccaacattcgataagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgatg 26601277  T
Q  131 atcg 134  Q
    ||||    
T  26601276 atcg 26601273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 30354412 - 30354253
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||| |||||||| ||||  || |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||     
T  30354412 gcaggaatccaacatgtgatgtgcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcagatgc 30354313  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | |||||||    ||||| | | | |||||||||||||||||||||||||||| ||||||    
T  30354312 tcatcgaatgtcggagtcctcctgtttagcaagtttgaatttgcctcattcagtggtaag 30354253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 28113991 - 28113832
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||| | ||||||||||||||| |||| ||   |||||||||||||||||  |||||||||||||||||||||||||||||||| |  |||||||||    
T  28113991 ggcaggaattcaacatttgataagcatcttgaataatggtattcaagtgtcaaataatgcacctcattcttttgacacttgaatacc-attttcaagatg 28113893  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||| ||  | ||||| ||| | ||||||||||||||||| || |||| |||||||||    
T  28113892 ttgatcggatgttggagtcctgctgtttagcaagtttgaatttaccccatttagaggtaag 28113832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 40589154 - 40589302
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||           | ||||| || ||||||||||||||| |||||||||||    
T  40589154 ggcaggactccagcattcgataagcgtcttgaacgctggtattcaagtgtc-----------cgcattcctt-gacacttgaataccaccgttcaagatg 40589241  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
     |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  40589242 ctgatcgaatactggagtcctgctggttagcaagtttgaatttgccccattcagtggtaag 40589302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 36393424 - 36393280
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||| | ||||||||| ||||||| |||| ||  |||| ||| ||||||| |||||||||||| ||||||||||||||||||||||| | | ||||||    
T  36393424 cggcagaaatccaacattcgataagcatcttgaatactggcattgaagtgtccaggaatgcaccttattcttttgacacttgaataccatcatgcaagat 36393325  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttg 171  Q
    |||||||| ||  | ||||| ||| | ||||||||||||||||||    
T  36393324 gttgatcggatggtggagtcctgctgtttagcaagtttgaatttg 36393280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 41622741 - 41622829
Alignment:
Q  82 gaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||| || || ||||||||| | |||||||||||||||||    
T  41622741 gaatgcacctcattcttttgacacttgaataccatcattcaagatgttgatcggatgctggagtcttgctgtttagcaagtttgaattt 41622829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 10224712 - 10224835
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||  || || ||||||||| | ||||||||||    
T  10224712 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaa-atgatcatcacatgctggagtcttgctgtttagcaagtt 10224810  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || |||| || ||||||    
T  10224811 tgaatttaccccattaaggggtaag 10224835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 180
Target Start/End: Original strand, 42735622 - 42735737
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 164  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | || ||||||||    
T  42735622 ggtattgaagtgtcaaagaatggacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctggagtcatgctgttttgcaagttt 42735721  T
Q  165 gaatttgcctcattca 180  Q
    |||||| || ||||||    
T  42735722 gaatttaccccattca 42735737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 46861755 - 46861637
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 165  Q
    |||||||||||||||||||    |||||||||||||||| ||||||| || | |||||||||||||| | ||  | ||||||||| | ||||||||||||    
T  46861755 gtattcaagtgtcaaggaa----cctcattcttttgacatttgaatatcaccattcaagatgttgattggatgttggagtcttgctgcttagcaagtttg 46861660  T
Q  166 aatttgcctcattcagaggtaag 188  Q
    ||||||||  |||||| ||||||    
T  46861659 aatttgcccaattcagtggtaag 46861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 34353271 - 34353387
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| | || || |||||||||| ||  | ||||| ||| | ||||||||||    
T  34353271 tggtattcaagtgtcaagaaatgcatcttattcttttgacatttgaataccatcatttaaaatgttgatcgtatgttggagtcctgctgtttagcaagtt 34353370  T
Q  164 tgaatttgcctcattca 180  Q
    ||||||| || ||||||    
T  34353371 tgaatttaccccattca 34353387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 21614632 - 21614582
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21614632 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 21614582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 1642438 - 1642389
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  1642438 gtattgaagtgtcaaggaatgcacctcattcttttgacactcgaatacca 1642389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 15337745 - 15337702
Alignment:
Q  72 aagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15337745 aagtgtcaaggaatgtacctcattcttttgacacttgaatacca 15337702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 21614307 - 21614260
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  21614307 ggtattgaagtgtcaaggaatggacctcattcttttgacacttgaata 21614260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 9366669 - 9366739
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||||||||| ||| ||||||||||||    
T  9366669 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcttgccgattaacaagtttgaatt 9366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 17839967 - 17839897
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||||| ||||||| || ||||| ||||| ||| ||||||||||||    
T  17839967 ttgacacttgaataccattgttcaagatgttcatcgaatgctggagtcctgccgattaacaagtttgaatt 17839897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 20877899 - 20877849
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  20877899 ggtattgaagtgtcaaggaatgcacctcatttttttgacacttcaatacca 20877849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 36393672 - 36393622
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  36393672 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 36393622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 21187145 - 21187096
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  21187145 gtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 21187096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 43350947 - 43350832
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 164  Q
    |||||| ||||||||| ||||| ||||||||||||||||| ||||||| || | ||||||||| | |||| || || ||||| |||   ||| ||| |||    
T  43350947 ggtattgaagtgtcaaagaatggacctcattcttttgacatttgaatatcatcattcaagatgcttatcgtattctggagtcctgctttttatcaatttt 43350848  T
Q  165 gaatttgcctcattca 180  Q
    |||||| || ||||||    
T  43350847 gaattttccccattca 43350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 13920963 - 13920893
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||| | | |||||||||| ||||| ||||| ||| ||||||||||||    
T  13920963 ttgacacttgaataccagtgttcaagaggcttatcgaatactggagtcctgccgattaacaagtttgaatt 13920893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 17183874 - 17183804
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  17183874 ttgacacttgaataccagcgttcaagaagattatcgaatgctggagtcctgccgattaacaagtttgaatt 17183804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 20378580 - 20378650
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||||| | |||||||  | ||||| ||||| ||| ||||||||||||    
T  20378580 ttgacacttgaataccatcgttcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 20378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 21650883 - 21650933
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| || |||||| ||||| ||||||||||||||||||||||||||||    
T  21650883 ggtattgaactgtcaaagaatgtacctcattcttttgacacttgaatacca 21650933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 23561756 - 23561814
Alignment:
Q  292 agatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaa 350  Q
    |||| ||||| |||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  23561756 agatatatctatagatatagtaaatccagcccttgccgcttgtcgacgaacccaaccaa 23561814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 34141523 - 34141453
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||| | ||| ||| ||||||||||||    
T  34141523 ttgacacttgaataccagcgttcaagacgtttatcgaatgctggagtcctaccgattaacaagtttgaatt 34141453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 46862041 - 46861991
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  46862041 ggtattgaagtgtcaagaaatggacctcattcttttgacatttgaatacca 46861991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 48271008 - 48271058
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| || |||||||||||||| ||||||||||    
T  48271008 ggtattgaagtgtcaaggaatggacatcattcttttgacatttgaatacca 48271058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 20565486 - 20565346
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||| ||| |||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||   |||||||||    
T  20565486 gcaggacaccagcattcgatcagcatcttgaacgctggtattcaagtgtcaacagaatgaggtgcattcctt-gacacttgaataccattattcaagatg 20565388  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||| | || |||||||||||||    
T  20565387 ctcatcgaatactggagtcctgcagattggcaagtttgaatt 20565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 30354662 - 30354613
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  30354662 ggtattgaagtgtcaacgaatggacctcattcttttgacatttgaatacc 30354613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 12169990 - 12170049
Alignment:
Q  291 tagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaa 350  Q
    ||||| ||||| ||||||||||||||||  ||||  |||||||||||||| |||||||||    
T  12169990 tagatttatctatagaaatagtaaatccgacccttgccgcttgtcgacgaccccaaccaa 12170049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 28114239 - 28114192
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  28114239 gtattgaagtgtcaatgaattgacctcattcttttgacacttgaatac 28114192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 48315027 - 48314988
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgaca 104  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  48315027 ggtattgaagtgtcaaggaatgaacctcattcttttgaca 48314988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 39476790 - 39476860
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||| ||||||||| | |||||||  | ||||| | ||| ||| ||||||||||||    
T  39476790 ttgacacttgaataccaacattcaagatgcttatcgaatgttggagtcctaccgattaacaagtttgaatt 39476860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 40589204 - 40589123
Alignment:
Q  101 gacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    ||||||||||||||| ||||||||| | | ||||||| || ||||| ||||  ||| |||||||||| ||||||||| |||||    
T  40589204 gacacttgaataccagcgttcaagacgcttatcgaatgctggagtcctgccaattaacaagtttgaa-ttgcctcatccagag 40589123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 40589264 - 40589206
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgc 87  Q
    |||||||||||  ||| ||| ||| |||| |||| ||||||||||||||||||||||||    
T  40589264 gcaggactccagtattcgatcagcatcttgaacggtggtattcaagtgtcaaggaatgc 40589206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 3942019 - 3942169
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  3942019 caggactccaacattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgagacttgaataccagcgttcaagatgct 3942118  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||| ||||||    
T  3942119 gatcgaatactggagtcctgctggttagcaagtttgaatttgccccattca 3942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 22493878 - 22494033
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22493878 tcggcaggactccaacatttgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataacaacgttcaaga 22493977  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    || ||||| |||| | ||||| ||  | |||||||||||||||||||| |||||||    
T  22493978 tgctgatcaaatattggagtcctgttgcttagcaagtttgaatttgccccattcag 22494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 5420749 - 5420905
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  5420749 ggcaggactccaacattcgataaacgtcttgaacgttgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcagtgttcaagatg 5420848  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
     |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  5420849 ctgatcgaatactggagtcctgctggttagcaagtttgaatttgcctcattcagagg 5420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 29073649 - 29073811
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| ||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  29073649 tcggcaagactccagcatttgataagcctcttgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaaga 29073748  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||||| ||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  29073749 tgctgatcgaatactagggtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 29073811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 42120621 - 42120774
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42120621 ggcaggactccaacattcgataaacgtcttgaacgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 42120720  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
     |||||||||| | || || ||| | |||||||||||||||||| | |||||||    
T  42120721 ctgatcgaatattggattcctgctgcttagcaagtttgaatttgtcccattcag 42120774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 16582433 - 16582592
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||||| || |||| |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16582433 gcaggacttcagcattcgataagtgtcttgaacgctagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgt 16582532  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||| ||||||| ||||| ||| ||||||||||| |||||||||| | ||||| ||||||    
T  16582533 tgattgaatactggagtcatgctggttagcaagtatgaatttgccccgttcagtggtaag 16582592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 39799471 - 39799309
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39799471 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 39799372  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||    
T  39799371 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgcctcattcagtggtaag 39799309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 17425394 - 17425556
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  17425394 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaaga 17425493  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  17425494 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 17425556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 22002442 - 22002601
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||||||||  ||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||     
T  22002442 gcaggactccagtattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatattttcgttcaagatgc 22002541  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  22002542 tgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 22002601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 41498653 - 41498529
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  41498653 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcggatgctggagtcctgctgtttagcaagtt 41498554  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  41498553 tgaatttgccccattcagtggtaag 41498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 8557326 - 8557171
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||| ||||||||| ||||||| |||| || | |||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||||    
T  8557326 tcggcaggagtccaacattcgataagcatcttgaatgttggtattcaagtgtcaaggaatgcgcctcattcttttgacaattgaataccatcattcaaga 8557227  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    ||||||||| ||  | || || ||| | ||||||||||||||||| || |||||||    
T  8557226 tgttgatcgtatggtggactcctgctgcttagcaagtttgaatttaccccattcag 8557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 10359799 - 10359652
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| |||||||||||| ||||||| |||| ||  |||| ||| |||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  10359799 tcggcatgactccaacattcgataagcctcttgaatactggcattgaagtgtcaaggaatgcaccttattcttttgacacttgaataccatcattcaaga 10359700  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||||||||| ||  | ||||| | | | ||||||||||||||||||||    
T  10359699 tgttgatcggatgttggagtcctactgtttagcaagtttgaatttgcc 10359652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 32736731 - 32736848
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  | |||||||||||||||| ||  ||||||||||| | ||||| ||||    
T  32736731 tggtattcaagtgtcaaggaatacacctcattcttttgacacttgaatatcttcattcaagatgttgatcgtatgttagagtcttgctgcttagccagtt 32736830  T
Q  164 tgaatttgcctcattcag 181  Q
    |||||||||| |||||||    
T  32736831 tgaatttgccccattcag 32736848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 28476148 - 28476272
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    |||||||||||| ||  ||| | ||||||||||    
T  28476148 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcattcaagatacacatcgaatactagggttctgctgcttagcaagtt 28476247  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||  ||||||| ||||||    
T  28476248 tgaatttgctccattcagtggtaag 28476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 34521305 - 34521189
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||| ||| | ||||||||||    
T  34521305 tggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgctcgagtcctgctgtttagcaagtt 34521206  T
Q  164 tgaatttgcctcattca 180  Q
    ||||||| |||||||||    
T  34521205 tgaatttacctcattca 34521189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 18393956 - 18394062
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||  | |||||||    
T  18393956 tcggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcaccttattcttttgatacttgaataccgtcattcaaga 18394055  T
Q  126 tgttgat 132  Q
    || ||||    
T  18394056 tgctgat 18394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 35492239 - 35492357
Alignment:
Q  70 tcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | |||| || || ||||||||  | ||||||||||||||||    
T  35492239 tcaagtgtcaaggattgcacctcattcttttgacacttgaataccatcattcaagatgcttatcggatgctggagtcttgttgtttagcaagtttgaatt 35492338  T
Q  170 tgcctcattcagaggtaag 188  Q
    |||| ||||||| ||||||    
T  35492339 tgccccattcagtggtaag 35492357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 11574557 - 11574478
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11574557 tatagtactagatttatctatagaaatagtgaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 11574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 19471225 - 19471064
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||| ||| | || || | ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  19471225 cggcaggattccagcattcgatgagcattttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatatcatcattcaagat 19471126  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| || || ||||| ||  | ||||||||||||||||| |  ||||||| ||||||    
T  19471125 gatcatcgcatgctggagtcctgttgtttagcaagtttgaatttactccattcaggggtaag 19471064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 23408321 - 23408474
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| ||| |||| ||| |||| ||   |||||||||||||||||||||||||||||||| ||||||||||||||||||| | || |||||    
T  23408321 cggcaggaatccagcatgtgatgagcatcttgaataatggtattcaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattgaagat 23408420  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | | |||| || |||||||| ||| | ||| ||||||||||||| || ||||||    
T  23408421 gctcatcgcatgctagagtcctgctgtttaacaagtttgaattttccccattca 23408474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 43492060 - 43492203
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||| | |||| |||| ||||||| |||| ||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  43492060 cggcagaaatccagcattcgataagcatcttgaatactggtattgaagtgtcaaggaatgcacctcattattttgacacttgaataccatcattcaagat 43492159  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaattt 170  Q
    | | |||| || || ||||| ||| | ||||||||||| |||||    
T  43492160 gctcatcggatgctggagtcctgctgtttagcaagtttaaattt 43492203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 24108348 - 24108245
Alignment:
Q  77 tcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctca 176  Q
    ||||||||||  ||||||||||||||||||||||||||| | ||||||||| ||||||| |||| ||||| ||| | ||||||||||||||||| || ||    
T  24108348 tcaaggaatgtccctcattcttttgacacttgaataccatcattcaagatgctgatcgagtactggagtcctgctgtttagcaagtttgaatttacccca 24108249  T
Q  177 ttca 180  Q
    ||||    
T  24108248 ttca 24108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 2918929 - 2918815
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| ||  | || || ||  | |||||||||||||    
T  2918929 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatggtggaatcatgttgtttagcaagtttga 2918830  T
Q  167 atttgcctcattcag 181  Q
    |||| || |||||||    
T  2918829 atttaccccattcag 2918815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 40676941 - 40676829
Alignment:
Q  68 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| | |||| || || ||||  ||| | ||||||||||| ||    
T  40676941 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctggagttctgctgtttagcaagtttaaa 40676842  T
Q  168 tttgcctcattca 180  Q
    |||||| ||||||    
T  40676841 tttgccccattca 40676829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 17538533 - 17538434
Alignment:
Q  38 caacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaat 137  Q
    ||||||| ||||||| |||| ||   ||| ||| ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||    
T  17538533 caacattcgataagcatcttgaataatggcattgaagtgtcaaggaatgcatctcattcttttgacacttgaataccatcattcaagatgctgatcgaat 17538434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 6977486 - 6977607
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | || || ||| | |||| ||  | ||||| ||  | ||||||||||| |    
T  6977486 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactatcatttaaaatgctcatcgcatgttggagtcctgttgtttagcaagtttaa 6977585  T
Q  167 atttgcctcattcagaggtaag 188  Q
    |||||||||||| ||| |||||    
T  6977586 atttgcctcatttagatgtaag 6977607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 20148492 - 20148541
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20148492 gtattgaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 20148541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 43983412 - 43983492
Alignment:
Q  108 gaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||| ||||||||||| | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  43983412 gaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 43983492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 33404373 - 33404420
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33404373 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaata 33404420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 35001169 - 35001094
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    |||||| || ||||| ||||||||||||||||  ||||  |||||||||||||||||||||||||| |||||||||    
T  35001169 gtactatatttatctatagaaatagtaaatccgtccctttccgcttgtcgacgaacccaaccaagtaattcttctc 35001094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 16253814 - 16253864
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16253814 ggtattgaagtgtcaaggaatgcacctcattcttttgacatttgaatacca 16253864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 29111496 - 29111546
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  29111496 ggtatttaagtgtcaaggaatacacctcattcttttgacacttgaatacca 29111546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 6902340 - 6902389
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  6902340 ggtattgaagtgtcaaggaatgcacctcattcttttgacacttcaatacc 6902389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 8276568 - 8276642
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||| | |||||||||||||||||||||| |||||| ||||||||| ||||| |||||| ||| |||||||||    
T  8276568 gtactaggtttatctgtagaaatagtaaatccagccctagccgcttgtcaacgaatccaacc-agtaattcttctc 8276642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 10325281 - 10325344
Alignment:
Q  288 tactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaag 351  Q
    |||||||| ||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  10325281 tactagatttatctatagatatagtaaatcccgcccttgccgcttgtcgacgaactcaaccaag 10325344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 10364481 - 10364431
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  10364481 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 10364431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 35491997 - 35492047
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  35491997 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 35492047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 40677219 - 40677169
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  40677219 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 40677169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 6977198 - 6977247
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  6977198 ggtattgaagtgtcaatgaatgaacctcattcttttgacacttgaatacc 6977247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 39799347 - 39799487
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  39799347 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 39799445  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  39799446 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 39799487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 24936434 - 24936526
Alignment:
Q  88 acctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||||||||||||||||||||||||||||   ||||||||| ||| || ||  | | ||| ||| | |||||||||||||||||||| ||||||    
T  24936434 acctcattcttttgacacttgaataccattattcaagatgctgaacgtatgttggcgtcctgctgcttagcaagtttgaatttgccccattca 24936526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 10364196 - 10364162
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattctt 98  Q
    |||||||||||||||||||||||||||||||||||    
T  10364196 tggtattcaagtgtcaaggaatgcacctcattctt 10364162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 10364180 - 10364250
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||| ||||| ||||| ||||||| || || || ||||| ||| ||||||||||||    
T  10364180 ttgacacttgaataccaacattcaaaatgttcatcgaatgctggattcctgccgtttaacaagtttgaatt 10364250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 17425448 - 17425378
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  || ||||||| | |||||||||| ||||| ||||| ||| ||||||||||||    
T  17425448 ttgacacttgaataccattgtccaagatgctcatcgaatactggagtcctgccgattaacaagtttgaatt 17425378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 19471478 - 19471428
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| |||||||||||||| || ||||||||||    
T  19471478 ggtattgaagtgtcaaggaatggacctcattcttttgccatttgaatacca 19471428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 22002493 - 22002423
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||| | ||| ||||||||||||    
T  22002493 ttgacacttgaataccattgttcaagatgctcatcgaatactggagtcctgcagattaacaagtttgaatt 22002423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 43491812 - 43491862
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  43491812 ggtattgaagtgtcaaggaatggacctcattcttttcacatttgaatacca 43491862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 2919209 - 2919160
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||||||    
T  2919209 ggtattgaagtgtcaatgaatggacctcattcttttgacgcttgaatacc 2919160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 5420801 - 5420731
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| |||||||||||| ||| |||||||  | ||||| ||||  ||| ||||||||||||    
T  5420801 ttgacacttgaatatcaacgttcaagacgtttatcgaatgttggagtcctgcctattaacaagtttgaatt 5420731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 29073703 - 29073633
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||| | | ||| ||| || ||||||||||| ||| ||||||||||||    
T  29073703 ttgacacttgaataccagtgttcaagaggcttatcaaatgctggagtcttgccgattaacaagtttgaatt 29073633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 42120673 - 42120603
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||||||||||| ||| |||||||  | ||||| ||||  |||  |||||||||||    
T  42120673 ttgacacttgaataccaacgttcaagacgtttatcgaatgttggagtcctgccaattaataagtttgaatt 42120603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 25685097 - 25685182
Alignment:
Q  95 tcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    |||||||||||||||||||||   ||||||||| ||| || ||  | | ||| ||| | |||||||||||||||||||| ||||||    
T  25685097 tcttttgacacttgaataccattattcaagatgctgaacgtatgttggcgtcctgctgcttagcaagtttgaatttgccccattca 25685182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 27130353 - 27130304
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||  ||||||||||||| |||||||||||||    
T  27130353 ggtattgaagtgtcaatgaatagacctcattcttttaacacttgaatacc 27130304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 37312339 - 37312290
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||   |||| |||||||||||||||||||||||||||    
T  37312339 ggtattgaagtgtcagtaaatggacctcattcttttgacacttgaatacc 37312290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 3936628 - 3936680
Alignment:
Q  117 cgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||| | |||||||||| ||||| ||||| ||| ||||||||||||    
T  3936628 cgttcaagatgctcatcgaatactggagtcctgccgattaacaagtttgaatt 3936680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 8557272 - 8557355
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    ||||||||||||||||||| ||||||||| | |||||||  | || || ||||| ||| |||||||| ||||||| ||| |||||    
T  8557272 ttgacacttgaataccaacattcaagatgcttatcgaatgttggactcctgccgattaacaagtttg-atttgccccatccagag 8557355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 11366 - 11211
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  11366 tcggcaggactccagcattcgataagcgtcttgaacgctgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaatactagcgttcaaga 11267  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    || |||||||||||| | ||| ||| | |||||||||||||||||||| |||||||    
T  11266 tgctgatcgaatactggtgtcctgctgcttagcaagtttgaatttgccccattcag 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 11312 - 11382
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| || ||||||||| | | ||||||| || ||||| ||||| ||| ||||||||||||    
T  11312 ttgacacttgaatatcagcgttcaagacgcttatcgaatgctggagtcctgccgattaacaagtttgaatt 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 4889 - 5051
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||  | |||||||||    
T  4889 tcggcaggactccaacattcgataagtgtcttgaacgctggtattcaagtgtcaaggaatacgcctcattcttttgacactcgaatatgagcgttcaaga 4988  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||||||| | |||||||||||||||||||| ||||||| ||||||    
T  4989 tgctgatcgaatactggagtcttgctgcttagcaagtttgaatttgccccattcagtggtaag 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 8575748 - 8575586
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8575748 tcggcaggactccagtattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 8575649  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||    
T  8575648 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgcctcattcagtggtaag 8575586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 38854757 - 38854919
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38854757 tcggcaggactccagtattcgataagcctctcgaacactggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 38854856  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  38854857 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 38854919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 27660984 - 27660822
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| | | |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27660984 tcggcaggactccagtattcgatgaacatcttcaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaga 27660885  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  27660884 tgctgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 27660822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 40012220 - 40012365
Alignment:
Q  28 ggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    ||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  40012220 ggcaggactccaacattcgataagcctcttgaatgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccgtcattcaagatg 40012319  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    ||||||||||| | ||||| | | | ||||||||||||||||||||    
T  40012320 ttgatcgaatattggagtcctactgcttagcaagtttgaatttgcc 40012365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 22284173 - 22284332
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||||| |||| ||| ||| ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  22284173 gcaggaccccaatattcgatcagcatcttgaacgccagtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaccgttcaagatcc 22284272  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  22284273 tgatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 22284332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Complemental strand, 6836 - 6674
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||||| |||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  6836 tcggcaggactccagcattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaaaa 6737  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| | ||| ||| | ||| ||||||||||||||||  |||||| ||||||    
T  6736 tgttgatcgaatactggggtcctgctgcttaacaagtttgaatttgccctattcagtggtaag 6674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 3459396 - 3459554
Alignment:
Q  30 caggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgtt 129  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  3459396 caggactccaacattcgataagcctcttgaacactggtattcaagtgtcaaggaatgcacttcattcttttgacacttgaataccatcattcaagatgtt 3459495  T
Q  130 gatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||| ||| | ||||| ||| | |||||||  ||||||||||| ||||||| ||||||    
T  3459496 gatcgtatattggagtcctgctgcttagcaaaattgaatttgccccattcagtggtaag 3459554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 19400970 - 19401123
Alignment:
Q  31 aggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttg 130  Q
    |||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  19400970 aggactccaacattcgataagcatcttgaacgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaatatgttg 19401069  T
Q  131 atcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagagg 184  Q
    |||| ||  | ||| | ||| | |||||||||| ||||||||| ||||||||||    
T  19401070 atcgtatgttggagccatgctgcttagcaagttagaatttgccccattcagagg 19401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 11028088 - 11028212
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  11028088 tggtattcaagtgtcaaagaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 11028187  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  11028188 tgaatttgccccattcagtggtaag 11028212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 30710197 - 30710359
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| |||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30710197 tcggcaggactccagtattcgatgagcatcttgaacaatggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaaga 30710296  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| | ||| ||| | || ||||||||||||||||| ||||||| ||||||    
T  30710297 tgctaatcgaatactggtgtcatgctgcttggcaagtttgaatttgccccattcagtggtaag 30710359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 19036243 - 19036119
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || | ||| ||| | || |||||||    
T  19036243 tggtattcaagtgtcaaggaatgcacctcattctgttgacacttgaataccagcgttcaagatgctgatcgaatgctggtgtcctgctgcttggcaagtt 19036144  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  19036143 tgaatttgccccattcagtggtaag 19036119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 28881590 - 28881752
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| |||| |||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  28881590 tcggcaggactccagtattcgatgagcatcttgaacaatggtattgaagtgtcaaggaatgcacctcattctgttgacacttgaataccaaggtttaaga 28881689  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| | ||| ||| | || ||||||||||||||||| ||||||| ||||||    
T  28881690 tgctaatcgaatactggtgtcctgctgcttggcaagtttgaatttgccccattcagtggtaag 28881752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 1399907 - 1399746
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    ||||||||  |||||||| ||| ||| | || || | ||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||    
T  1399907 cggcaggaagccaacattcgatgagcattttgaatgatggtattcaagtgtcaaggaatgcaccacattcttttgacacttgaatatcatcattcaagat 1399808  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| || |||||||| ||| | ||||||||||||||||| || ||||||| ||||||    
T  1399807 gctcatcgcatgctagagtcctgctgtttagcaagtttgaatttaccccattcaggggtaag 1399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 1971967 - 1972124
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||| |||||||||||||| ||||||| |||| ||   ||||||| ||||||||||||||||||||||||||||||||| || ||||||| | |||||||    
T  1971967 tcgggaggactccaacattcgataagcctcttgaatattggtattgaagtgtcaaggaatgcacctcattcttttgacagttaaataccatcattcaaga 1972066  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    || |||||| ||  | ||||| ||| | |||||||||||||||||||| ||| |||||    
T  1972067 tgctgatcggatgttggagtcctgctgtttagcaagtttgaatttgccccatccagag 1972124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 6793078 - 6792925
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| |||| |||| ||||||| |||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  6793078 cggcaggaatccagcattcgataagcatcttgaatactggtattgaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagat 6792979  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | |||||| ||  | ||||| ||  | ||||||| |||||||||||| ||||||    
T  6792978 gctgatcggatgttggagtcatgttgtttagcaaatttgaatttgccccattca 6792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 7082877 - 7083030
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    ||||||||||||| |||| ||| ||| |||| || | |||||||||||||||||||||||||||||||||||| ||||||||||||||  | || || ||    
T  7082877 cggcaggactccagcattcgatgagcatcttgaatgatggtattcaagtgtcaaggaatgcacctcattctttagacacttgaataccgtcatttaaaat 7082976  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | | |||||||| | ||||| ||| | |||||||||||||||||||| ||||||    
T  7082977 gctcatcgaatattggagtcctgcagtttagcaagtttgaatttgccccattca 7083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 35565876 - 35566037
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||||||| | || || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||    
T  35565876 cggcaggaatccaacattcgataagcattttgaatgatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaat 35565975  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||  ||  | ||||| ||| | ||||||||||||||||| || ||||||||||||||    
T  35565976 gctcatcacatgttggagtcgtgctgtttagcaagtttgaatttaccccattcagaggtaag 35566037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 5505671 - 5505592
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5505671 tatagtactagatttatctatagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtaattcttctc 5505592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 25498687 - 25498848
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||||| ||||||||| ||| ||| |||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| | || || ||    
T  25498687 cggcaggaatccaacattcgatgagcatcttgaatgatggtattgaagtgtcaaggaatgcacctcattcttttgacatttgaataccatcatttaaaat 25498786  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | |||| || || ||||| ||| | ||||||||||||||||| || ||||||| ||||||    
T  25498787 gctcatcggatgctggagtcctgctgtttagcaagtttgaatttaccccattcaggggtaag 25498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 1695432 - 1695556
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| ||  | ||||| ||| | ||||||||||    
T  1695432 tggtatccaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctcatcgcatgatggagtcctgctgtttagcaagtt 1695531  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || |||| |||||||||    
T  1695532 tgaatttaccccatttagaggtaag 1695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 18308901 - 18309025
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||| |||||| ||  | ||||| | |   ||||||||||    
T  18308901 tggtattcaagtgtcaaggaatgcatctcattcttttgacacttgaataccataattcaagatgctgatcggatgttggagtcctactacttagcaagtt 18309000  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||||||||||| ||||||    
T  18309001 tgaatttgcctcattcagtggtaag 18309025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 11347351 - 11347473
Alignment:
Q  66 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||| | |||| ||  | ||||  ||| | ||||||||||||    
T  11347351 gtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttgcatatgctcatcggatgttggagttctgctgtttagcaagtttg 11347450  T
Q  166 aatttgcctcattcagaggtaag 188  Q
    |||||||||||||||| ||||||    
T  11347451 aatttgcctcattcagtggtaag 11347473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 1171792 - 1171945
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    |||||| |||||| |||| ||| ||| |||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||  | || || ||    
T  1171792 cggcagaactccagcattcgatgagcatcttgaatgatggtattcaagtgtcaaggaatgtacctcattcttttgacacttgaataccgtcatttaaaat 1171891  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    | | ||||||| || ||||| ||| | ||| |||||||||||||||| ||||||    
T  1171892 gctcatcgaatcctggagtcatgcagtttaacaagtttgaatttgccccattca 1171945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 20196683 - 20196843
Alignment:
Q  27 cggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagat 126  Q
    ||||| || |||| |||||||| ||| |||| |  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  20196683 cggcatgaatccagcatttgatgagcctcttgattgctggtatttaagtgtcaaggaatgtacctcattcttttgacacttgaataccatcattcaagat 20196782  T
Q  127 gttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||| ||| ||  | ||||  ||| | ||||||||||||||||| || ||||||| ||||||    
T  20196783 gttggtcggatgttggagtactgctgcttagcaagtttgaattt-ccccattcagtggtaag 20196843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 34683490 - 34683374
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||| || || ||||  ||| | ||||||||||    
T  34683490 tggtatccaagtgtcaaggaatgcacttcattcttttgacacttgaataccatcattcaagatgttcatcgcatgctggagtgctgctgtttagcaagtt 34683391  T
Q  164 tgaatttgcctcattca 180  Q
    ||||||| || ||||||    
T  34683390 tgaatttaccccattca 34683374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 36349891 - 36349764
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac---caacgttcaagatgttgatcgaatactagagtcttgccggttagcaa 160  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||   || | ||||||||| | |||| || || ||||| ||| | |||||||    
T  36349891 tggtatccaagtgtcaaggaatgcacctcattcttttgatacttgaataccatcatcattcaagatgctcatcgcatgctggagtcctgctgtttagcaa 36349792  T
Q  161 gtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||| || |||| |||||||||    
T  36349791 gtttgaatttaccccatttagaggtaag 36349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 762472 - 762551
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    |||||||||| || ||||| |||||||||||||||||| |||||||||||| |||| ||||||||||||| |||||||||    
T  762472 tatagtactatatttatctatagaaatagtaaatcccgtcctacccgcttgccgacaaacccaaccaagtaattcttctc 762551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 30490915 - 30490994
Alignment:
Q  283 tatagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||  ||||||||||||| |||||||||    
T  30490915 tatagtactagatttatctatagaaatagtaaatccctccctacccacttgtcgataaacccaaccaagtaattcttctc 30490994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 34016791 - 34016866
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| |||||||||    
T  34016791 gtactagatttatctgtagaaatagtaaatccagccctagccgcttgttgacgaatccaaccaagtaattcttctc 34016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 3601967 - 3602101
Alignment:
Q  46 gataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagt 145  Q
    ||||||| |||| |||  || |||||||||| ||| |||||||||| |||||||||||| ||||||| || | ||||||||| |||||||||||| ||||    
T  3601967 gataagcctcttgaacaatgatattcaagtgccaatgaatgcaccttattcttttgacatttgaatatcatcattcaagatgctgatcgaatactggagt 3602066  T
Q  146 cttgccggttagcaagtttgaatttgcctcattca 180  Q
    | |||   ||| ||| |||||||||||| ||||||    
T  3602067 cctgctatttaacaattttgaatttgccccattca 3602101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 8538553 - 8538607
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaa 80  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  8538553 tcggcaggactccaacattcgataagcatcttgaacgctggtattcaagtgtcaa 8538607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 12743043 - 12743093
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  12743043 ggtattgaagtgtcaaggaatgcacgtcattcttttgacacttgaatacca 12743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 12805861 - 12805911
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  12805861 ggtattgaagtgtcaaggaatgcacgtcattcttttgacacttgaatacca 12805911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 30710251 - 30710181
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | |||||||||| ||||| ||||| ||||||||||||||||    
T  30710251 ttgacacttgaataccattgttcaagatgctcatcgaatactggagtcctgccgattagcaagtttgaatt 30710181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 8575624 - 8575764
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  ||||||||||    
T  8575624 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgttcaagatg 8575722  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  8575723 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 8575764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 27660860 - 27661000
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  ||| ||||||    
T  27660860 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgttgaagatg 27660958  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    || |||||||||| ||||| ||||| ||| ||||||||||||    
T  27660959 ttcatcgaatactggagtcctgccgattaacaagtttgaatt 27661000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 33370986 - 33371033
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaata 112  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  33370986 ggtattaaagtgtcaaagaatgcacctcattcttttgacacttgaata 33371033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 1400152 - 1400102
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  1400152 ggtattgaagtgtcaaggaatgaacctcattcttttgacatttgaatacca 1400102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 4723636 - 4723530
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||| | || || ||| | |||| || ||  |||| ||| | |||| ||||||||    
T  4723636 tatttaagtgtcaaggaatgcacctcattcttttgacgcttaaataccatcatttaaaatgctcatcgcatgctgcagtcatgctgtttagaaagtttga 4723537  T
Q  167 atttgcc 173  Q
    |||||||    
T  4723536 atttgcc 4723530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 4723924 - 4723874
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  4723924 ggtattgaagtgtcaaggaatggacctcattcttttgacatttgaatacca 4723874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 10398147 - 10398193
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaat 111  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  10398147 ggtattgaagtgtcaatgaatgcacctcattcttttgacacttgaat 10398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 17366581 - 17366531
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  17366581 ggtattgaattgtcaaggaatgcacctcattctttagacacttgaatacca 17366531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 36350175 - 36350125
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  36350175 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacca 36350125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 1695147 - 1695196
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  1695147 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatacc 1695196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 11028174 - 11028034
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     |||||||| |||||||||||||||  || |||||||    
T  11028174 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcttt-gacacttgaataccattgtccaagatg 11028076  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||  ||| ||||||||||||    
T  11028075 ctcatcgaatactggagtcctgccaattaacaagtttgaatt 11028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 8538609 - 8538537
Alignment:
Q  97 ttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||||| ||||||||||| | |||||||  | ||||| ||||| ||| ||||||||||||    
T  8538609 ttttgacacttgaataccagcgttcaagatgcttatcgaatgttggagtcctgccgattaacaagtttgaatt 8538537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 35565628 - 35565676
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  35565628 ggtattgaagtgtcaatgaatggacctcattcttttgacacttgaatac 35565676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 6782 - 6852
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||||||  |||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  6782 ttgacacttgaataccattgttcaagatgctcatcgaatgctggagtcctgccgattaacaagtttgaatt 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 7082930 - 7082860
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| | ||||||||| | ||||||| || ||||| ||||| ||| ||||||||||||    
T  7082930 ttgacacttgaataccatcattcaagatgctcatcgaatgctggagtcctgccgtttaacaagtttgaatt 7082860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 12743379 - 12743428
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  12743379 ggtattgaagtgtcaaggaatgcacctcattc-tgtgacacttgaatacca 12743428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 12806198 - 12806247
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  12806198 ggtattgaagtgtcaaggaatgcacctcattc-tgtgacacttgaatacca 12806247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 28881644 - 28881574
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||| |||||||  |||||||||| | |||||||||| ||||| ||||| || |||||||||||||    
T  28881644 ttgacacttcaataccattgttcaagatgctcatcgaatactggagtcctgccgattggcaagtttgaatt 28881574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 33371311 - 33371361
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||| ||||||| |||||| |||||||||||||||||||    
T  33371311 ggtattgaagtgtcaatgaatgcaactcattattttgacacttgaatacca 33371361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 38854881 - 38854741
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||| ||| |||| ||||||||||||||||||||||  |||||     ||||| || |||||||||||||||  |||| ||| |    
T  38854881 gcaggactccagtattcgatcagcatcttgaacgctggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccagtgttcgagagg 38854783  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  38854782 cttatcgaatactggagtcctgccgattaacaagtttgaatt 38854741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 18308617 - 18308665
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  18308617 ggtattgaagtttcaaggaatggacctcattcttttgacatttgaatac 18308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 34683769 - 34683726
Alignment:
Q  72 aagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||    
T  34683769 aagtgtcaaggaatgtaccttattcttttgacatttgaatacca 34683726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 1171845 - 1171775
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| | ||||||||| | ||||||| || ||||  ||||| ||| ||||||||||||    
T  1171845 ttgacacttgaataccatcattcaagatgctcatcgaatgctggagttctgccgtttaacaagtttgaatt 1171775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 17366449 - 17366415
Alignment:
Q  154 ttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||||| |||||||||||||||||    
T  17366449 ttagcaagtttgaatttacctcattcagaggtaag 17366415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 6793326 - 6793278
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatac 113  Q
    |||||| ||||||||| ||||| |||| |||||||||||| ||||||||    
T  6793326 ggtattgaagtgtcaatgaatggaccttattcttttgacagttgaatac 6793278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 8e-49; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 13617504 - 13617350
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13617504 tcggcaggactcaagcattcgataagcgtcttgaacgctggtattcaagtgtcaaggaatgcactccattcttttgacacttgaataccaacgttcaaga 13617405  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    || |||| ||||| | ||||| ||| | |||||||||||||||||||| ||||||    
T  13617404 tgctgatagaatattggagtcatgctgcttagcaagtttgaatttgccccattca 13617350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 6206089 - 6206251
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    ||||||||||||||  ||| ||| ||| ||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6206089 tcggcaggactccagtattcgatgagcatcttggacaatggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaaga 6206188  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    || | |||||||||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||    
T  6206189 tgcttatcgaatactggagtcctgctgcttagcaagtttgaatttgccccattcagtggtaag 6206251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 11693094 - 11693218
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| | ||||||||||    
T  11693094 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcgttcaagatgcttatcgaatactggagtcctgctgcttagcaagtt 11693193  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  11693194 tgaatttgccccattcagtggtaag 11693218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 2192999 - 2193158
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||||| |||| ||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||      
T  2192999 gcaggaccccaatattcgatcagcatcttgaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccactgttcaagatcc 2193098  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    |||||||||||| ||||| ||| | || ||||||||||||||||| |||| || ||||||    
T  2193099 tgatcgaatactggagtcctgctgcttggcaagtttgaatttgccccatttagtggtaag 2193158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 24020698 - 24020554
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    ||||||| |||| ||| ||| ||| |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  24020698 gcaggaccccaatattcgatcagcatcttgaacgttgatattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaccgttcaagatcc 24020599  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcc 173  Q
    |||||||||||| ||||| ||| | ||||||||||||||||||||    
T  24020598 tgatcgaatactggagtcctgctgcttagcaagtttgaatttgcc 24020554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 29067144 - 29067264
Alignment:
Q  68 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||||||||    
T  29067144 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgcagatcgaatactggagtcctgctggttagcaagtttgaa 29067243  T
Q  168 tttgcctcattcagaggtaag 188  Q
    |||| | |||| || ||||||    
T  29067244 tttgtcccatttagtggtaag 29067264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 29108731 - 29108851
Alignment:
Q  68 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||| ||| ||||||||||||||||    
T  29108731 attcaagtgtcaaggaatgcacctcattcttttgacacttgaataccagcgttcaagatgcagatcgaatactggagtcctgctggttagcaagtttgaa 29108830  T
Q  168 tttgcctcattcagaggtaag 188  Q
    |||| | |||| || ||||||    
T  29108831 tttgtcccatttagtggtaag 29108851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 35058338 - 35058183
Alignment:
Q  26 tcggcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaaga 125  Q
    |||||| ||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  35058338 tcggcaagactctaacattcgataagcatcttgaatgctggtattcaagtgtcaaggaatgcacatcattcttttgacacttgaataccatcattcaaga 35058239  T
Q  126 tgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcag 181  Q
    || |||||| ||  | ||||| ||| | |||||||||||||||||| | |||||||    
T  35058238 tgctgatcgtatgttggagtcgtgctgcttagcaagtttgaatttgtcccattcag 35058183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 27640819 - 27640943
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| | |||||| ||| ||||| ||| | ||||||||||    
T  27640819 tggtattcaagtgtcaagaaatgcacctcattcttttcacacttgaataccatcgttcaagatgctaatcgaacactggagtcctgctgcttagcaagtt 27640918  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    |||||||||| ||||||| ||||||    
T  27640919 tgaatttgccccattcagtggtaag 27640943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 13403448 - 13403586
Alignment:
Q  50 agcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttg 149  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||  | ||||| |     
T  13403448 agcgtcttgaatgttggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgctgatcggatgttggagtccta 13403547  T
Q  150 ccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    | | ||||||| |||||||||||| ||||||| ||||||    
T  13403548 ctgcttagcaaatttgaatttgccccattcagtggtaag 13403586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 12397426 - 12397547
Alignment:
Q  67 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || | ||  |  |||| ||| | |||||||||||||    
T  12397426 tattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcattcaagatgttcataggatgttgtagtcctgctgtttagcaagtttga 12397525  T
Q  167 atttgcctcattcagaggtaag 188  Q
    ||||||| ||||||| ||||||    
T  12397526 atttgccccattcagcggtaag 12397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 32027190 - 32027066
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||  | |||| ||||| ||||| ||  | ||||||||||    
T  32027190 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaattatcatcgcatactggagtcctgttgtttagcaagtt 32027091  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||| ||||||    
T  32027090 tgaatttaccacattcaggggtaag 32027066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 32037249 - 32037125
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||  | |||| ||||| ||||| ||  | ||||||||||    
T  32037249 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaattatcatcgcatactggagtcctgttgtttagcaagtt 32037150  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||| ||||||    
T  32037149 tgaatttaccacattcaggggtaag 32037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 31519737 - 31519814
Alignment:
Q  285 tagtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31519737 tagtactagatttatctatagaactagtaaatcccgccctacccgcttgtcgacgaacccaaccaagtatttcttctc 31519814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 35020799 - 35020675
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtt 163  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||  ||||| | |||| || |  ||||| ||| | ||||||||||    
T  35020799 tggtattcaagcgtcaaggaatgcacctcattcttttaacacttgaataccatcgttgcagatgctcatcggatgccggagtcctgctgtttagcaagtt 35020700  T
Q  164 tgaatttgcctcattcagaggtaag 188  Q
    ||||||| || ||||||| ||||||    
T  35020699 tgaattttccccattcagtggtaag 35020675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 7821232 - 7821305
Alignment:
Q  64 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||| ||||||||    
T  7821232 tggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccatcatttaaaatgtcgatcgaat 7821305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 34802743 - 34802620
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagttt 164  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||   || || ||| | |||| || || || || ||| | |||||||||||    
T  34802743 ggtattgaagtgtcaaagaatgcacctcattcatttgacacttgaataccattatttaaaatgatcatcgcatgctggaatcctgctgtttagcaagttt 34802644  T
Q  165 gaatttgcctcattcagaggtaag 188  Q
     ||||| |||||||||| ||||||    
T  34802643 aaatttacctcattcaggggtaag 34802620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 801526 - 801575
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  801526 ggtattgaagtgtcgaggaatgcacctcattcttttgacacttgaatacc 801575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 4495266 - 4495315
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  4495266 ggtattgaagtgtcaaggaatgaacctcattcttttgacacttgaatacc 4495315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 2193050 - 2192980
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    ||||||||||||||||| ||||||||||| |||||||||| | | ||| ||| | ||||||||||||||||    
T  2193050 ttgacacttgaataccagcgttcaagatgctgatcgaatattggggtcctgctgattagcaagtttgaatt 2192980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 14122963 - 14123013
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  14122963 ggtattgaagtgtcaaggaatggaccttattcttttgacacttgaatacca 14123013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 23911112 - 23911154
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacactt 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  23911112 ggtattgaagtgtcaaggaatgcacctcattcttttgacactt 23911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 24020647 - 24020717
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
    |||||||||||||| |||||||||||||| |||||||||| | | ||| ||| | ||||||||||||||||    
T  24020647 ttgacacttgaatatcaacgttcaagatgctgatcgaatattggggtcctgctgattagcaagtttgaatt 24020717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 6206213 - 6206073
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  6206213 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 6206115  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | |||||||||| ||||| ||||| ||| ||||||||||||    
T  6206114 ctcatcgaatactggagtcctgccgattaacaagtttgaatt 6206073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 35058284 - 35058367
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagag 183  Q
    ||||||||||||||||| | ||||||||| | |||||||  |||||||||||||  || |||||||||| ||||||||| |||||    
T  35058284 ttgacacttgaataccagcattcaagatgcttatcgaatgttagagtcttgccgagtaacaagtttgaa-ttgcctcatccagag 35058367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 13402895 - 13402945
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacca 115  Q
    |||||| ||||||||||||||| |||||||| |||||||| ||||||||||    
T  13402895 ggtattgaagtgtcaaggaatggacctcattattttgacatttgaatacca 13402945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 11693180 - 11693040
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaag-gaatgcacctcattcttttgacacttgaataccaacgttcaagatg 127  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||||||||  |||||     ||||| || |||||||||||||||  || |||||||    
T  11693180 gcaggactccagtattcgataagcatcttgaacgatggtattcaagtgtcaaaagaatgaggtgcattcctt-gacacttgaataccattgtccaagatg 11693082  T
Q  128 ttgatcgaatactagagtcttgccggttagcaagtttgaatt 169  Q
     | || ||||||| ||||| ||||| ||| ||||||||||||    
T  11693081 ctcattgaatactggagtcctgccgattaacaagtttgaatt 11693040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 30257426 - 30257377
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||||    
T  30257426 ggtattgaagtgtcaatgaatgaacctcatttttttgacacttgaatacc 30257377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 32027475 - 32027426
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  32027475 ggtattgaagtgccaatgaatgaacctcattcttttgacacttgaatacc 32027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 32037534 - 32037485
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  32037534 ggtattgaagtgccaatgaatgaacctcattcttttgacacttgaatacc 32037485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 13543073 - 13543132
Alignment:
Q  303 tagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    |||||||||||||||| |||||  | ||||||||||||||| |||||||| | |||||||    
T  13543073 tagaaatagtaaatccggcccttgctgcttgtcgacgaaccgaaccaagtaaatcttctc 13543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 13617450 - 13617517
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttga 166  Q
    ||||||||||||||||| ||||||||| | | ||||||| || ||||| ||||| ||| |||||||||    
T  13617450 ttgacacttgaataccagcgttcaagacgcttatcgaatgcttgagtcctgccgattaacaagtttga 13617517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 12397138 - 12397187
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| || |||||||||||||| |||||||||    
T  12397138 ggtattgaagtgtcaacgaatggacatcattcttttgacatttgaatacc 12397187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 35021084 - 35021035
Alignment:
Q  65 ggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaatacc 114  Q
    |||||| ||||||||| ||||| ||||| ||||||||||| |||||||||    
T  35021084 ggtattgaagtgtcaacgaatggacctctttcttttgacatttgaatacc 35021035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 27640835 - 27640783
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgcc 151  Q
    |||||||||||||||||   ||||||||| | |||||||||||||||| ||||    
T  27640835 ttgacacttgaataccattattcaagatgctcatcgaatactagagtcctgcc 27640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 15076 - 15235
Alignment:
Q  29 gcaggactccaacatttgataagcgtcttaaacgctggtattcaagtgtcaaggaatgcacctcattcttttgacacttgaataccaacgttcaagatgt 128  Q
    |||||||||||  ||| ||||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| |     
T  15076 gcaggactccagtattcgataagcctcttgaacgcttgtattcaagtgtcaaggaatgcacctcattctgttgacacttgaatacaagcgttcaagaggc 15175  T
Q  129 tgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||| || | ||| ||| | || ||||||||| ||||||| ||||||| ||||||    
T  15176 tgatcgaatgctggtgtcctgctgcttggcaagtttggatttgccccattcagtggtaag 15235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 15127 - 15038
Alignment:
Q  99 ttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattcagaggtaag 188  Q
    ||||||||||||||| | ||||||||| | | |||||||||| ||||| ||| | || ||||||||| ||||||| ||||||| ||||||    
T  15127 ttgacacttgaatacaagcgttcaagaggcttatcgaatactggagtcctgctgctttgcaagtttggatttgccccattcagtggtaag 15038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 9671 - 9744
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttc 360  Q
    ||||||||| |||||  ||||||||||||||  | |||  |||||||||||||||||||||||||| |||||||    
T  9671 gtactagatttatctaaagaaatagtaaatctggaccttgccgcttgtcgacgaacccaaccaagtaattcttc 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 437 - 364
Alignment:
Q  287 gtactagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttc 360  Q
    ||||||||| |||||  ||||||| ||||||  | |||  |||||||||||||||||||||||||| |||||||    
T  437 gtactagatttatctaaagaaatactaaatctggaccttgccgcttgtcgacgaacccaaccaagtaattcttc 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 17481 - 17392
Alignment:
Q  91 tcattcttttgacacttgaataccaacgttcaagatgttgatcgaatactagagtcttgccggttagcaagtttgaatttgcctcattca 180  Q
    ||||||||||||||||||||||||| | || || ||| | |||| || ||  |||| ||| | |||||||||||||||||||| ||||||    
T  17481 tcattcttttgacacttgaataccatcatttaaaatgctcatcgcatgctgcagtcctgctgtttagcaagtttgaatttgccccattca 17392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 2387 - 2316
Alignment:
Q  291 tagatctatctgtagaaatagtaaatcccgccctacccgcttgtcgacgaacccaaccaagttattcttctc 362  Q
    ||||| ||||| ||||||||  ||||||| |  || |||||| ||||||||||||||||||| |||||||||    
T  2387 tagatttatctatagaaataaaaaatccctcggtagccgcttttcgacgaacccaaccaagtaattcttctc 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University