View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5067-Insertion-11 (Length: 356)

Name: NF5067-Insertion-11
Description: NF5067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5067-Insertion-11
NF5067-Insertion-11
[»] chr6 (23 HSPs)
chr6 (7-245)||(3857064-3857301)
chr6 (254-356)||(17598562-17598664)
chr6 (245-356)||(31976247-31976358)
chr6 (266-356)||(11427638-11427728)
chr6 (254-356)||(32869686-32869788)
chr6 (241-355)||(31110752-31110864)
chr6 (254-356)||(22880648-22880750)
chr6 (238-356)||(23128117-23128235)
chr6 (243-350)||(30341356-30341463)
chr6 (244-350)||(15990038-15990144)
chr6 (246-350)||(15508020-15508124)
chr6 (243-356)||(6209455-6209568)
chr6 (254-355)||(29857835-29857936)
chr6 (246-350)||(4231548-4231652)
chr6 (242-356)||(15832573-15832687)
chr6 (254-351)||(28536483-28536578)
chr6 (242-350)||(12732478-12732586)
chr6 (254-356)||(946384-946486)
chr6 (258-356)||(31109390-31109488)
chr6 (254-350)||(9379708-9379804)
chr6 (258-350)||(31953026-31953118)
chr6 (245-311)||(22422053-22422119)
chr6 (290-356)||(30870058-30870124)
[»] chr1 (34 HSPs)
chr1 (243-356)||(32813244-32813357)
chr1 (254-356)||(27564725-27564827)
chr1 (254-356)||(47452310-47452412)
chr1 (242-356)||(8346378-8346492)
chr1 (245-355)||(37926429-37926539)
chr1 (243-356)||(2581912-2582025)
chr1 (242-350)||(5958996-5959104)
chr1 (245-356)||(51898673-51898784)
chr1 (254-356)||(43140-43242)
chr1 (254-356)||(9474866-9474968)
chr1 (254-356)||(44548366-44548468)
chr1 (240-356)||(26440728-26440844)
chr1 (244-356)||(38632311-38632423)
chr1 (244-356)||(49811517-49811629)
chr1 (241-356)||(37649193-37649308)
chr1 (245-356)||(50630457-50630568)
chr1 (254-356)||(3000327-3000429)
chr1 (242-356)||(38595150-38595264)
chr1 (246-350)||(50590996-50591100)
chr1 (254-353)||(48716275-48716374)
chr1 (254-356)||(26274440-26274542)
chr1 (246-350)||(41608489-41608593)
chr1 (277-356)||(41758836-41758915)
chr1 (247-356)||(44453980-44454089)
chr1 (244-355)||(45044551-45044662)
chr1 (243-356)||(23597081-23597194)
chr1 (267-356)||(11152368-11152457)
chr1 (241-350)||(47748438-47748546)
chr1 (289-354)||(48489343-48489408)
chr1 (277-353)||(13414792-13414868)
chr1 (254-316)||(34340069-34340130)
chr1 (289-346)||(3302533-3302590)
chr1 (277-350)||(44332367-44332440)
chr1 (246-346)||(6260870-6260970)
[»] chr3 (38 HSPs)
chr3 (240-356)||(11347912-11348028)
chr3 (246-356)||(26141522-26141632)
chr3 (244-356)||(41189754-41189866)
chr3 (242-356)||(49607410-49607524)
chr3 (244-355)||(27714882-27714993)
chr3 (246-356)||(20764905-20765015)
chr3 (246-356)||(47531865-47531975)
chr3 (246-356)||(51419350-51419460)
chr3 (254-356)||(53982019-53982121)
chr3 (244-356)||(54868885-54868997)
chr3 (254-356)||(31456697-31456799)
chr3 (254-356)||(33644208-33644310)
chr3 (254-356)||(52629308-52629410)
chr3 (245-356)||(17470404-17470515)
chr3 (245-356)||(24699944-24700055)
chr3 (254-356)||(48587081-48587183)
chr3 (245-350)||(8956761-8956866)
chr3 (245-350)||(35536625-35536730)
chr3 (244-356)||(11907369-11907481)
chr3 (244-356)||(33118841-33118953)
chr3 (257-356)||(26754706-26754805)
chr3 (244-356)||(35965772-35965876)
chr3 (254-356)||(8076401-8076503)
chr3 (254-356)||(30801723-30801825)
chr3 (244-355)||(11095346-11095455)
chr3 (254-350)||(14623835-14623931)
chr3 (287-350)||(36331325-36331388)
chr3 (13-70)||(46472560-46472618)
chr3 (262-350)||(13898051-13898139)
chr3 (277-356)||(9563030-9563109)
chr3 (287-350)||(25407143-25407207)
chr3 (243-356)||(36707418-36707527)
chr3 (246-350)||(45058549-45058652)
chr3 (272-350)||(42823137-42823215)
chr3 (185-241)||(46472372-46472428)
chr3 (298-356)||(48375696-48375754)
chr3 (244-349)||(35093583-35093688)
chr3 (286-350)||(41080748-41080811)
[»] chr2 (36 HSPs)
chr2 (241-356)||(42257188-42257303)
chr2 (246-356)||(40613892-40614002)
chr2 (244-356)||(9058478-9058590)
chr2 (240-356)||(38273132-38273248)
chr2 (245-355)||(5574479-5574589)
chr2 (244-356)||(10249372-10249484)
chr2 (254-356)||(13438351-13438453)
chr2 (254-356)||(17473028-17473130)
chr2 (254-356)||(28381645-28381747)
chr2 (242-350)||(45097731-45097839)
chr2 (245-356)||(32505638-32505749)
chr2 (241-356)||(33436090-33436205)
chr2 (254-356)||(19930810-19930912)
chr2 (254-356)||(28863463-28863565)
chr2 (254-356)||(40701486-40701588)
chr2 (245-356)||(36168835-36168946)
chr2 (245-350)||(33436210-33436315)
chr2 (244-356)||(30915461-30915573)
chr2 (246-350)||(38732354-38732458)
chr2 (245-356)||(2533123-2533233)
chr2 (245-356)||(7465725-7465836)
chr2 (241-356)||(20700810-20700925)
chr2 (254-356)||(4060693-4060795)
chr2 (267-350)||(2997483-2997566)
chr2 (254-350)||(41575145-41575242)
chr2 (246-350)||(43490121-43490225)
chr2 (243-355)||(26891495-26891607)
chr2 (254-350)||(27864712-27864808)
chr2 (289-356)||(3737986-3738053)
chr2 (287-350)||(13365394-13365457)
chr2 (243-355)||(38882802-38882916)
chr2 (296-350)||(3034979-3035033)
chr2 (296-350)||(3154193-3154247)
chr2 (248-314)||(41758587-41758653)
chr2 (246-350)||(17820000-17820104)
chr2 (244-314)||(17823782-17823852)
[»] chr7 (38 HSPs)
chr7 (254-356)||(3784003-3784105)
chr7 (247-356)||(35522877-35522986)
chr7 (245-356)||(3434561-3434672)
chr7 (244-355)||(19436178-19436289)
chr7 (254-356)||(19329850-19329952)
chr7 (245-355)||(36362025-36362135)
chr7 (245-355)||(36361904-36362014)
chr7 (267-356)||(3694388-3694477)
chr7 (243-356)||(40957704-40957817)
chr7 (244-356)||(7389387-7389499)
chr7 (244-356)||(36208171-36208283)
chr7 (244-356)||(8080373-8080485)
chr7 (245-356)||(46033791-46033902)
chr7 (254-356)||(38267048-38267150)
chr7 (242-356)||(38837213-38837327)
chr7 (242-346)||(7727902-7728006)
chr7 (246-350)||(32564422-32564526)
chr7 (238-350)||(41915733-41915845)
chr7 (254-356)||(4999504-4999606)
chr7 (238-350)||(8238203-8238317)
chr7 (254-356)||(32951483-32951585)
chr7 (258-356)||(35137545-35137643)
chr7 (246-340)||(46374808-46374902)
chr7 (245-350)||(22343360-22343465)
chr7 (242-350)||(35468851-35468959)
chr7 (245-356)||(26296643-26296754)
chr7 (244-350)||(38044195-38044301)
chr7 (242-350)||(18207176-18207283)
chr7 (246-356)||(31735884-31735987)
chr7 (246-349)||(21234401-21234504)
chr7 (241-350)||(40846109-40846218)
chr7 (246-350)||(41423682-41423786)
chr7 (243-312)||(10343597-10343666)
chr7 (277-350)||(16374820-16374893)
chr7 (245-350)||(12310905-12311008)
chr7 (246-316)||(39255953-39256023)
chr7 (269-350)||(2318239-2318320)
chr7 (243-295)||(11044185-11044237)
[»] chr5 (28 HSPs)
chr5 (246-356)||(28177775-28177885)
chr5 (245-356)||(2740273-2740384)
chr5 (245-356)||(6679697-6679808)
chr5 (254-356)||(33149628-33149730)
chr5 (246-355)||(26720516-26720625)
chr5 (246-355)||(26990265-26990374)
chr5 (244-356)||(15409600-15409712)
chr5 (254-356)||(13811660-13811762)
chr5 (254-356)||(35785207-35785309)
chr5 (246-356)||(35943882-35943992)
chr5 (254-356)||(14831822-14831924)
chr5 (254-356)||(18520874-18520976)
chr5 (245-350)||(2252164-2252269)
chr5 (244-356)||(36732932-36733044)
chr5 (243-350)||(3921261-3921368)
chr5 (254-356)||(40145415-40145517)
chr5 (242-355)||(31008984-31009097)
chr5 (269-353)||(42414295-42414379)
chr5 (257-351)||(33825319-33825413)
chr5 (244-350)||(39688893-39688999)
chr5 (269-356)||(39557507-39557594)
chr5 (244-350)||(9603811-9603917)
chr5 (243-347)||(38296200-38296304)
chr5 (267-350)||(16327922-16328005)
chr5 (254-309)||(10356642-10356698)
chr5 (254-305)||(36875644-36875695)
chr5 (290-356)||(21370048-21370114)
chr5 (294-356)||(31132392-31132454)
[»] chr8 (30 HSPs)
chr8 (248-356)||(10621077-10621185)
chr8 (254-356)||(1179930-1180032)
chr8 (246-356)||(43414571-43414681)
chr8 (254-356)||(5957838-5957940)
chr8 (254-356)||(15197341-15197443)
chr8 (254-356)||(34012286-34012388)
chr8 (254-356)||(504111-504213)
chr8 (254-356)||(14547930-14548032)
chr8 (245-356)||(37038478-37038589)
chr8 (254-356)||(12831055-12831157)
chr8 (254-356)||(23122587-23122689)
chr8 (254-356)||(40423933-40424035)
chr8 (246-351)||(15048177-15048281)
chr8 (245-350)||(32032724-32032828)
chr8 (244-356)||(4854853-4854965)
chr8 (242-350)||(16056397-16056505)
chr8 (242-350)||(16383373-16383481)
chr8 (244-350)||(24307789-24307895)
chr8 (245-356)||(44507077-44507188)
chr8 (244-350)||(34307214-34307320)
chr8 (244-356)||(15258919-15259031)
chr8 (243-350)||(10284627-10284734)
chr8 (290-356)||(9122229-9122295)
chr8 (267-356)||(8841422-8841511)
chr8 (242-325)||(24307625-24307708)
chr8 (244-350)||(42221513-42221619)
chr8 (246-355)||(38229429-38229537)
chr8 (246-350)||(30479470-30479574)
chr8 (254-355)||(20074933-20075026)
chr8 (245-350)||(17443824-17443929)
[»] chr4 (39 HSPs)
chr4 (246-356)||(40574779-40574889)
chr4 (242-356)||(50052418-50052532)
chr4 (254-356)||(6034052-6034154)
chr4 (254-356)||(41236355-41236457)
chr4 (242-356)||(42044357-42044471)
chr4 (244-350)||(55475189-55475295)
chr4 (245-350)||(50813888-50813993)
chr4 (244-356)||(48183039-48183151)
chr4 (242-356)||(480437-480551)
chr4 (244-350)||(29547955-29548061)
chr4 (246-356)||(31910192-31910302)
chr4 (244-350)||(32766956-32767062)
chr4 (254-355)||(11511453-11511554)
chr4 (254-356)||(50526161-50526263)
chr4 (278-356)||(56300155-56300233)
chr4 (245-350)||(47986207-47986312)
chr4 (242-350)||(19670712-19670820)
chr4 (290-356)||(41823926-41823992)
chr4 (254-356)||(54473523-54473625)
chr4 (243-356)||(29239883-29239996)
chr4 (246-350)||(8343159-8343263)
chr4 (267-350)||(17983739-17983822)
chr4 (245-356)||(29234235-29234346)
chr4 (269-350)||(29977908-29977989)
chr4 (267-356)||(24995097-24995186)
chr4 (246-350)||(55079709-55079814)
chr4 (254-350)||(3481662-3481758)
chr4 (254-356)||(53352556-53352657)
chr4 (245-350)||(44536742-44536846)
chr4 (244-356)||(23608233-23608345)
chr4 (244-356)||(48647716-48647828)
chr4 (287-350)||(29589736-29589799)
chr4 (245-347)||(28480267-28480369)
chr4 (245-347)||(28481142-28481244)
chr4 (245-347)||(28482017-28482119)
chr4 (244-350)||(47104542-47104648)
chr4 (246-350)||(29535377-29535480)
chr4 (290-320)||(18769153-18769183)
chr4 (290-350)||(18769043-18769103)
[»] scaffold0321 (1 HSPs)
scaffold0321 (242-356)||(10099-10213)
[»] scaffold0237 (1 HSPs)
scaffold0237 (254-355)||(4037-4138)
[»] scaffold0018 (1 HSPs)
scaffold0018 (287-350)||(152539-152602)
[»] scaffold1268 (1 HSPs)
scaffold1268 (254-356)||(919-1021)
[»] scaffold1267 (1 HSPs)
scaffold1267 (254-356)||(919-1021)
[»] scaffold0316 (1 HSPs)
scaffold0316 (289-355)||(17097-17163)


Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 3857301 - 3857064
Alignment:
Q  7 attgcacacatataagaatcataaaatcaacaaaattaattattcaatttcatctaccaaataaggctatgattttgttacaaaatatcatctaataaat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3857301 attgcacacatataagaatcataaaatcaacaaaattaattattcaatttcatctaccaaataaggctatgattttgttacaaaatat-atctaataaat 3857203  T
Q  107 tatcttgaatgttgaaatcataaaaccaatggaaatggatagaaacaaaaagttgctcagcattgtttagccactgacgcatcatgtatcttttgaacca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3857202 tatcttgaatgttgaaatcataaaaccaatggaaatggatagaaacaaaaagttgctcagcattgtttagccactgacgcatcatgtatcttttgaacca 3857103  T
Q  207 ttcaaccaacgtaggttcttaaacggaatgattttaaaa 245  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3857102 ttcaaccaacgtaggttctcaaacggaatgattttaaaa 3857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 17598562 - 17598664
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  17598562 atacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttttct 17598661  T
Q  354 ctc 356  Q
    |||    
T  17598662 ctc 17598664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 31976247 - 31976358
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||| ||||||||| |||| | | ||| |||||||||||||||||||||||||||||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  31976347 ctcttttctctc 31976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 11427638 - 11427728
Alignment:
Q  266 tcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  11427638 tcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctc 11427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 32869686 - 32869788
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  32869686 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 32869785  T
Q  354 ctc 356  Q
    |||    
T  32869786 ctc 32869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 31110864 - 31110752
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    |||||||||||| |||||||||||| ||||||||| |||||| | |||||||| ||||  ||||||||||||||   || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  341 ctttctcttttctct 355  Q
    |||||||||||||||    
T  31110766 ctttctcttttctct 31110752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 22880750 - 22880648
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | |||||||||||||||||| |||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  22880750 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 22880651  T
Q  354 ctc 356  Q
    |||    
T  22880650 ctc 22880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 356
Target Start/End: Complemental strand, 23128235 - 23128117
Alignment:
Q  238 ttttaaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagc 337  Q
    |||||||||| | || ||| |||||||   ||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||  |||||||  |||||||    
T  23128235 ttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagc 23128136  T
Q  338 acactttctcttttctctc 356  Q
    |||||||||||||||||||    
T  23128135 acactttctcttttctctc 23128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 30341463 - 30341356
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  343 ttctcttt 350  Q
    ||||||||    
T  30341363 ttctcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 15990144 - 15990038
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  344 tctcttt 350  Q
    |||||||    
T  15990044 tctcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 15508124 - 15508020
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  346 tcttt 350  Q
    |||||    
T  15508024 tcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 6209568 - 6209455
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || |||||||||||  ||||||||| ||||||   |||||||| |||||||||||||| ||||| ||||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  343 ttctcttttctctc 356  Q
    ||||||||||||||    
T  6209468 ttctcttttctctc 6209455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 29857835 - 29857936
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||   |||| ||| |||||| ||||| ||||||||||||||||||||||||| || |  ||||||| ||| ||||||||||||||||||||    
T  29857835 atacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttct 29857934  T
Q  354 ct 355  Q
    ||    
T  29857935 ct 29857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 4231548 - 4231652
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| || |||| ||||  |||||||| |||||| |  ||| |||||||||||||||||||||||||| |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  346 tcttt 350  Q
    |||||    
T  4231648 tcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 15832573 - 15832687
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||   |||||||  |||| ||| |||||||||||||||||||| |||||||| ||||  ||||||||||||||  |||     
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  342 tttctcttttctctc 356  Q
    |||||||||| ||||    
T  15832673 tttctcttttttctc 15832687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 351
Target Start/End: Complemental strand, 28536578 - 28536483
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctctttt 351  Q
    ||||||| |||| ||||||||| |||||| |  ||||||||||||||||||||||||||  |||||| |||| ||  |||||||||||||||||||||    
T  28536578 atacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctctttt 28536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 12732478 - 12732586
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || ||||||||||||||||| |||| |||| |    ||||||||||||||||||||||||||||||  || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  12732578 tttctcttt 12732586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 946384 - 946486
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||| |||||||| ||||||| | ||||||||| || |||||||||||||| | ||||  |  |||| || | |||||||||||||||||||    
T  946384 atacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttct 946483  T
Q  354 ctc 356  Q
    |||    
T  946484 ctc 946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 31109488 - 31109390
Alignment:
Q  258 atagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||  ||||||||| |||||| | ||||||| ||||||||||||||||||||| ||||  | || || ||| ||| |||||||||||||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttttctctc 31109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 350
Target Start/End: Complemental strand, 9379804 - 9379708
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||| ||||| ||  ||||||||  |||||||||| |||||||| |||||||||| ||| ||||||   ||||| |||| |||||||||    
T  9379804 atacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 31953118 - 31953026
Alignment:
Q  258 atagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||| ||||||||| |||||| |  |||||||||||| |||||||||||| ||| |||| |||| |   ||||| ||||||||||||||    
T  31953118 atagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgaca 311  Q
    ||||| || |||||||||||| ||||||||| |||| |||| ||||||| || |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 30870058 - 30870124
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||| | |||||||| ||| ||||||| ||||| || ||||||||||| ||||||||| |||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 30870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 32813244 - 32813357
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| |||||||||||| ||||||||| |||||| | ||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  343 ttctcttttctctc 356  Q
    ||||||||||||||    
T  32813344 ttctcttttctctc 32813357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 27564827 - 27564725
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||  |||  |||| || ||||||||||||||||||||||||    
T  27564827 atacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttct 27564728  T
Q  354 ctc 356  Q
    |||    
T  27564727 ctc 27564725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 47452412 - 47452310
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||||||||||||||| | |||||||||||||||||||||| |||||| ||||  ||||||| ||||||||||||||||||||||||    
T  47452412 atacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttttct 47452313  T
Q  354 ctc 356  Q
    |||    
T  47452312 ctc 47452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 8346492 - 8346378
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||| ||   |||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  8346392 tttctcttttctctc 8346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 37926539 - 37926429
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||||| ||  |||||||| |||||||||||| ||||||||| ||||||||||||||||| || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  345 ctcttttctct 355  Q
    |||||||||||    
T  37926439 ctcttttctct 37926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 2581912 - 2582025
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  343 ttctcttttctctc 356  Q
    |||| |||||||||    
T  2582012 ttcttttttctctc 2582025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 5959104 - 5958996
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||  |||| |||| |||||| || ||||||||||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  5959004 tttctcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 51898784 - 51898673
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || ||||||||||||  |||||||| |||||| | ||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  345 ctcttttctctc 356  Q
    || ||| |||||    
T  51898684 ctatttcctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 43140 - 43242
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||| ||||||| |  |||||||| ||||||||||||||||||||||||||||| ||||  ||||  | ||||||||||||||||||||||||    
T  43140 atacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttct 43239  T
Q  354 ctc 356  Q
    |||    
T  43240 ctc 43242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 9474968 - 9474866
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || |||||| |||||||||||||||||    
T  9474968 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttttct 9474869  T
Q  354 ctc 356  Q
    |||    
T  9474868 ctc 9474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 44548468 - 44548366
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||||  |||||||| |||||| | ||||| ||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  44548468 atacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 44548369  T
Q  354 ctc 356  Q
    |||    
T  44548368 ctc 44548366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 26440728 - 26440844
Alignment:
Q  240 ttaaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcac 339  Q
    ||||| ||||||  ||| |||||||| ||||| ||  |||||| | ||| ||||||||||||||||||||||||||| || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  340 actttctcttttctctc 356  Q
    |||||||||||||||||    
T  26440828 actttctcttttctctc 26440844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 38632423 - 38632311
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| ||||| ||| ||||||||||||||||||||| ||||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  344 tctcttttctctc 356  Q
    | |||||||||||    
T  38632323 tttcttttctctc 38632311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 49811629 - 49811517
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||| |||||||| ||||||||  |||||| | ||||||| ||||||||||||||||||||| | ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  49811529 tctcttttctctc 49811517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 37649193 - 37649308
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    |||| |||| || ||||||||||||  |||||||| ||||||   ||||||||||||||||||||||||||||||||||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  341 ctttctcttttctctc 356  Q
    ||||| ||||||||||    
T  37649293 ctttcccttttctctc 37649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 50630457 - 50630568
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || ||||||||| |  ||||||||| |||||||| ||||  ||||||||||||||||||||||| ||||  |||| || |||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  50630557 ctcttttctctc 50630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 3000327 - 3000429
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||| |||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || | ||||||||||||||||||||||    
T  3000327 atacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttct 3000426  T
Q  354 ctc 356  Q
    |||    
T  3000427 ctc 3000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 38595150 - 38595264
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || ||||||| |||   |||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  38595250 tttctcttttctctc 38595264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 50591100 - 50590996
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  346 tcttt 350  Q
    |||||    
T  50591000 tcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 48716374 - 48716275
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||| ||||||||||||||||||||| ||||  |||| || ||||||||||||||| ||||||||    
T  48716374 atacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 26274440 - 26274542
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||| |||| |||||||| ||||||| ||||| ||||||||||||| | ||||  ||||||||||||||| ||||||| ||||||||    
T  26274440 atacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttttct 26274539  T
Q  354 ctc 356  Q
    |||    
T  26274540 ctc 26274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 41608593 - 41608489
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||| ||||||||| |||||| |  ||||||| ||||||||||||||||| |||| |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  346 tcttt 350  Q
    |||||    
T  41608493 tcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 41758836 - 41758915
Alignment:
Q  277 aatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||| | ||||||| ||||||||||||||||||||| |||| ||||| || |||||| ||||||||||||||||||||    
T  41758836 aatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctc 41758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 44453980 - 44454089
Alignment:
Q  247 agttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttct 346  Q
    |||||| |||||||||||   ||| |||| ||||||||| |||| |||||||||||||||||||| ||||| |  |||||||  |||||||||||||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  347 cttttctctc 356  Q
    |||| |||||    
T  44454080 ctttcctctc 44454089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 45044662 - 45044551
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |  | ||||||||| |||||| | ||||||||||| |||||||||||||| || | || ||||| || |||||| |||| ||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattt 45044563  T
Q  344 tctcttttctct 355  Q
    ||||||||||||    
T  45044562 tctcttttctct 45044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 23597194 - 23597081
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || ||||||||||||  |||||||| ||||||   ||||| ||||||| ||||||||||||||||| ||  | || | ||||||| ||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacact 23597095  T
Q  343 ttctcttttctctc 356  Q
    || |||||||||||    
T  23597094 ttatcttttctctc 23597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 11152457 - 11152368
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||| |||||| | || |||| ||||||||||||||||||||| ||||| | || || |||||||||| |||||| ||| |||||    
T  11152457 cttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctc 11152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 47748438 - 47748546
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    |||| ||||||| ||||||| | |  ||||||||| |||||| | || |||||||| | |||||||||||| |||| ||||||||||| ||||||| | |    
T  47748438 taaatgagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtata 47748536  T
Q  341 ctttctcttt 350  Q
    ||||||||||    
T  47748537 ctttctcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 48489343 - 48489408
Alignment:
Q  289 gacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctc 354  Q
    |||| |||||||||||||||||| |||||||  ||||||| ||||||||||| ||||| |||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttctc 48489408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 13414792 - 13414868
Alignment:
Q  277 aatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||| | |||||||||||||||||||||| |||||| ||||  |||| ||  |||||||||| ||||||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 34340130 - 34340069
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtgg 316  Q
    ||||||||||| ||||||||||||||||| || ||||   |||||||||||||||||||||||    
T  34340130 atacatagacactcttaggtggtaatacacctgttga-tgccacacaaaaatctgacacgtgg 34340069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 3302590 - 3302533
Alignment:
Q  289 gacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttct 346  Q
    ||||||||||||||||||||||||||  ||||||||| ||   |||||||||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 44332440 - 44332367
Alignment:
Q  277 aatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||| |||| |||||||||||| |||||||||||| |||| | |||||| || ||||||| | |||||||||||    
T  44332440 aatatatctcttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctcttt 44332367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 6260870 - 6260970
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||| ||||| || |||||||||||||||| |  |  ||||||||| |||||||| ||| |||||||  |||| || ||| ||||||| ||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  346 t 346  Q
    |    
T  6260970 t 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 11348028 - 11347912
Alignment:
Q  240 ttaaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcac 339  Q
    ||||||||||||| |||||||||||| ||||||||  |||||||| ||||||| ||||||||||||||||||||||| || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  340 actttctcttttctctc 356  Q
    |||||||||||||||||    
T  11347928 actttctcttttctctc 11347912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 26141632 - 26141522
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||| |||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  26141532 tcttttctctc 26141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 41189866 - 41189754
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||| ||||||||| |||||||| ||||||||||||| |||||| |||||||||| || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  41189766 tctcttttctctc 41189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 49607410 - 49607524
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  49607510 tttctcttttctctc 49607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 27714993 - 27714882
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||   ||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  344 tctcttttctct 355  Q
    |||||| |||||    
T  27714893 tctcttctctct 27714882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 20765015 - 20764905
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| | |||||||||| ||||||||||||||||   ||| ||||||||||||||||||||||||||| || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  20764915 tcttttctctc 20764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 47531865 - 47531975
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||| ||| |||||| ||||| ||| |||||||| |||||||||||||| |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  47531965 tcttttctctc 47531975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 51419460 - 51419350
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||| ||  |||||||| ||| ||||||||||||||||||||||||||| || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  51419360 tcttttctctc 51419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 53982019 - 53982121
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  53982019 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 53982118  T
Q  354 ctc 356  Q
    |||    
T  53982119 ctc 53982121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 54868997 - 54868885
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||| || |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  54868897 tctcttttctctc 54868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 31456697 - 31456799
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  | |||| || |||||| | ||||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  31456697 atacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttct 31456796  T
Q  354 ctc 356  Q
    |||    
T  31456797 ctc 31456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 33644208 - 33644310
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||| ||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  33644208 atacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 33644307  T
Q  354 ctc 356  Q
    |||    
T  33644308 ctc 33644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 52629308 - 52629410
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || | ||||||||||||||||||||||    
T  52629308 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttct 52629407  T
Q  354 ctc 356  Q
    |||    
T  52629408 ctc 52629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 17470404 - 17470515
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||   |||||||| |||||| ||||| ||||||||||||||||||||||||| ||||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  17470504 ctcttttctctc 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 24700055 - 24699944
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| ||||| ||| |||||| ||||||||||||||| ||||||||| ||||||| ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  345 ctcttttctctc 356  Q
    |||||| |||||    
T  24699955 ctctttcctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 48587183 - 48587081
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||| |  ||||||||| |||||| | ||||||||| ||| ||||||||||||||| ||||  ||||||| ||||||| ||||||||||||||||    
T  48587183 atacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttttct 48587084  T
Q  354 ctc 356  Q
    |||    
T  48587083 ctc 48587081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 8956761 - 8956866
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| |||| |||| |||||||| ||||||||||||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  345 ctcttt 350  Q
    ||||||    
T  8956861 ctcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 35536625 - 35536730
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| |||| |||| |||||| | ||||||||||||| |||||| |||||||||||||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  345 ctcttt 350  Q
    ||||||    
T  35536725 ctcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 11907369 - 11907481
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| |||||||||||  ||||||||  ||||||    |  |||| ||||||||||||||||| ||||||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  11907469 tctcttttctctc 11907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 33118953 - 33118841
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| |||||||||||  ||||||||  |||||| | |||||||||||||||||||| |||||||| ||||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  344 tctcttttctctc 356  Q
    ||||||| |||||    
T  33118853 tctctttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 26754706 - 26754805
Alignment:
Q  257 catagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||  ||||||||| |||||| | || |||| |||||||||||||||||| ||||||| ||||| || ||||||||||| ||||||||| |||||    
T  26754706 catagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 35965876 - 35965772
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || ||||||| |||| |||| ||| ||||||||| ||||||||||||| ||||||||||||||        ||||||||||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacg--------tggatcctgcacaagcacactt 35965785  T
Q  344 tctcttttctctc 356  Q
    ||||||| |||||    
T  35965784 tctctttcctctc 35965772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 8076401 - 8076503
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||| |||  ||||||||| | |||| | |||||||||||||||||||||| |||||| ||||  |||| || ||||||||||||||||||||| ||    
T  8076401 atacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcct 8076500  T
Q  354 ctc 356  Q
    |||    
T  8076501 ctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 30801825 - 30801723
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||||||| ||||||| | ||||| |||||||||||||| ||||| || |||||||||| ||  |||||||||| ||||||||| ||    
T  30801825 atacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcct 30801726  T
Q  354 ctc 356  Q
    |||    
T  30801725 ctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 11095455 - 11095346
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| |||  | | | || ||| || |||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtc--acgtaccccgcataaacacactt 11095358  T
Q  344 tctcttttctct 355  Q
    ||||||||||||    
T  11095357 tctcttttctct 11095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 350
Target Start/End: Complemental strand, 14623931 - 14623835
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||| ||||||||| |||||| |  |||||||||||| |||||||||||| ||| |||| |||| |   ||||||||||||||||||||    
T  14623931 atacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 36331388 - 36331325
Alignment:
Q  287 ttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||||||||    
T  36331388 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 46472618 - 46472560
Alignment:
Q  13 cacatataagaa-tcataaaatcaacaaaattaattattcaatttcatctaccaaataa 70  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  46472618 cacatataagaaataattaaatcaacaaaattaattattcaatttcatctaccaaataa 46472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 13898139 - 13898051
Alignment:
Q  262 acattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||| ||||||||| |||||| |  |||||||||||| |||||||||||||||| |||| |||| |   ||||||||||||||||||||    
T  13898139 acatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 9563030 - 9563109
Alignment:
Q  277 aatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||| | ||||||| ||| | ||||||||||||||| ||||  |||||||||||||| |||||||||||| |||||||    
T  9563030 aatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctcttctctc 9563109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 25407207 - 25407143
Alignment:
Q  287 ttgacacccacacaaaaa-tctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||  ||||| ||||||||||||||    
T  25407207 ttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctcttt 25407143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 36707527 - 36707418
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || ||||||||| |  ||||||||  |||||| | ||||||| ||||||||||||||||||||| || |  ||||||| ||    |||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacact 36707432  T
Q  343 ttctcttttctctc 356  Q
    ||||||||||||||    
T  36707431 ttctcttttctctc 36707418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 45058652 - 45058549
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  ||||||||| |||||| | || |||||||||| |||||||||||| |||  |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  346 tcttt 350  Q
    |||||    
T  45058553 tcttt 45058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 42823137 - 42823215
Alignment:
Q  272 gtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||||| |  |||||||||||| |||||| ||||| ||||||||||||| || ||| ||| | |||||||||||    
T  42823137 gtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctcttt 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 46472428 - 46472372
Alignment:
Q  185 gcatcatgtatcttttgaaccattcaaccaacgtaggttcttaaacggaatgatttt 241  Q
    ||||||| |||||||||||||||||||||||  | | |||| |||||||||||||||    
T  46472428 gcatcatctatcttttgaaccattcaaccaatattgcttctcaaacggaatgatttt 46472372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 48375754 - 48375696
Alignment:
Q  298 acaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||||||||  ||||||| ||||| || ||||||||||| ||||||||| |||||    
T  48375754 acaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctttcctctc 48375696  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 35093583 - 35093688
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||  |||||||||||   |||||||  |||||| | ||||||| |||| ||||||||||||| |||||||| || |  |   ||||||||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  344 tctctt 349  Q
    ||||||    
T  35093683 tctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 41080748 - 41080811
Alignment:
Q  286 tttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||| ||||||||||| | |||||||| |||| ||  |||||||||| |||||||||    
T  41080748 tttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctcttt 41080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 42257188 - 42257303
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    |||||||||||| ||||||||||||  |||||||| |||||||| ||||||||||||| ||||||||||||||||| || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  341 ctttctcttttctctc 356  Q
    ||||||||||||||||    
T  42257288 ctttctcttttctctc 42257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 40614002 - 40613892
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  40613902 tcttttctctc 40613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 9058478 - 9058590
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  9058578 tctcttttctctc 9058590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 38273248 - 38273132
Alignment:
Q  240 ttaaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcac 339  Q
    ||||||||||||| |||||||||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||| | || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  340 actttctcttttctctc 356  Q
    |||||||||||||||||    
T  38273148 actttctcttttctctc 38273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 5574589 - 5574479
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || ||||||||||| |||||||||| |||||| | ||||||||||||| ||||||||||||||| ||||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  345 ctcttttctct 355  Q
    |||||||||||    
T  5574489 ctcttttctct 5574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 10249484 - 10249372
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||  |||||| ||||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  10249384 tctcttttctctc 10249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 13438351 - 13438453
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||  |||||||| ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  13438351 atacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 13438450  T
Q  354 ctc 356  Q
    |||    
T  13438451 ctc 13438453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 17473028 - 17473130
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||| ||| |||||| | ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  17473028 atacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 17473127  T
Q  354 ctc 356  Q
    |||    
T  17473128 ctc 17473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 28381747 - 28381645
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| |||| |||||||||||||||||||||||||| |||| |||||  | ||||||||||||||||||||||||    
T  28381747 atacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttttct 28381648  T
Q  354 ctc 356  Q
    |||    
T  28381647 ctc 28381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 45097839 - 45097731
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||| ||||||||| ||||||||  |||||||||| |||||||||||||| |||| |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  45097739 tttctcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 32505749 - 32505638
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  ||||||||  |||||| ||||||||||||||||||||||||||||||| ||||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  345 ctcttttctctc 356  Q
    || |||||||||    
T  32505649 ctattttctctc 32505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 33436205 - 33436090
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    ||||||||| || |||||||||||  ||||||||| |||||| | |||||||||||||||||||||| |||||| ||||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  341 ctttctcttttctctc 356  Q
    |||||||||| |||||    
T  33436105 ctttctctttcctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 19930912 - 19930810
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||| ||||||||||||||||||||| ||||| |||| || |||||| |||||||||||||||||    
T  19930912 atacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttttct 19930813  T
Q  354 ctc 356  Q
    |||    
T  19930812 ctc 19930810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 28863463 - 28863565
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || |||||||||||||||||||||| |    
T  28863463 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttat 28863562  T
Q  354 ctc 356  Q
    |||    
T  28863563 ctc 28863565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 40701486 - 40701588
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||| || |  |||| || |||||| |||||||||||||||||    
T  40701486 atacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttct 40701585  T
Q  354 ctc 356  Q
    |||    
T  40701586 ctc 40701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 36168835 - 36168946
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||| ||||| ||  |||||||| ||| || ||||||||||||| |||||||||| || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  36168935 ctcttttctctc 36168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 33436210 - 33436315
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| ||||| ||| |||||| ||||||||||||||| ||||||||||||||||  ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  345 ctcttt 350  Q
    ||||||    
T  33436310 ctcttt 33436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 30915461 - 30915573
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| | |||||| |||||| ||||||||||||||| ||||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  30915561 tctcttttctctc 30915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 38732354 - 38732458
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  |||| |||  ||||||||  ||||||||||||||||||||||||| ||||||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  346 tcttt 350  Q
    |||||    
T  38732454 tcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 2533123 - 2533233
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||| |||| |||| |||||||| ||||||||| ||||||||||||||||||| | || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T
Q  345 ctcttttctctc 356  Q
     |||||| ||||    
T  2533222 ttcttttatctc 2533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 7465836 - 7465725
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  ||||| ||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  345 ctcttttctctc 356  Q
    ||||||| ||||    
T  7465736 ctcttttatctc 7465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 20700810 - 20700925
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    ||||||||| || |||||||||||| |||| |||| |||||| | |||||| || ||||||||||||||||||| ||||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  341 ctttctcttttctctc 356  Q
    |||||||||| |||||    
T  20700910 ctttctctttcctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 4060693 - 4060795
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||  |||||| ||||||||| ||||||||||||||||||||| || |  ||||||| ||| ||||||||||||| ||||||    
T  4060693 atacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttttct 4060792  T
Q  354 ctc 356  Q
    |||    
T  4060793 ctc 4060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 2997566 - 2997483
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||||||||    
T  2997566 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 41575145 - 41575242
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatgga-tcctgcacaagcacactttctcttt 350  Q
    |||||||||||| ||||| |||||||||| | |||||||  ||||||||||| ||||| |||||||| ||||  ||| ||||||||||||||||||||    
T  41575145 atacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctcttt 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 43490121 - 43490225
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  ||||||||  |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||     
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttta 43490220  T
Q  346 tcttt 350  Q
    |||||    
T  43490221 tcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 26891607 - 26891495
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| |||||||| ||  ||||||||| |||||| |  | ||||||||||||||||||||||| |||||||  |||| |  | ||||||||| |    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  343 ttctcttttctct 355  Q
    |||||||| ||||    
T  26891507 ttctctttcctct 26891495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 27864712 - 27864808
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||  |||| |||| |||||| | ||||||| |||||||||||||||||||||  |||  |||| || ||| |||||||||||||||||    
T  27864712 atacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 3737986 - 3738053
Alignment:
Q  289 gacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||||||||||||||||| |||||||| |||| || ||||||||||| ||||| ||| |||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctc 3738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 13365394 - 13365457
Alignment:
Q  287 ttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||||||||||||||||||| |||  |||||||| || ||||||| |||||||||||||    
T  13365394 ttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 38882916 - 38882802
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatgga---tcctgcacaagcac 339  Q
    ||||||| || |||||||||||  ||||||||| |||| | | ||||||| ||||||||||||||||||||| ||||  ||||    || |||||||| |    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgc 38882818  T
Q  340 actttctcttttctct 355  Q
    ||||||||||||||||    
T  38882817 actttctcttttctct 38882802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 3035033 - 3034979
Alignment:
Q  296 acacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||||||| ||||||||||||| || ||||||| | |||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctcttt 3034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 3154193 - 3154247
Alignment:
Q  296 acacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||||||||||||||| |||||||| || ||| |||| |||||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctcttt 3154247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 41758587 - 41758653
Alignment:
Q  248 gttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgt 314  Q
    ||||| |||||| |||||| ||||||||||||| | ||||||||||| | | |||||||||||||||    
T  41758587 gttataatacatggacatttttaggtggtaatataccttttgacacctatataaaaatctgacacgt 41758653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 17820104 - 17820000
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||    ||||||| |||||| |  ||||||||||||||||||||||||| ||||| |  |||| ||  ||||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  346 tcttt 350  Q
    |||||    
T  17820004 tcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 17823782 - 17823852
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgt 314  Q
    |||||| || ||||||| |||| ||||||||| |||||||   |  |||||||||||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 3784003 - 3784105
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  3784003 atacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 3784102  T
Q  354 ctc 356  Q
    |||    
T  3784103 ctc 3784105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 35522877 - 35522986
Alignment:
Q  247 agttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttct 346  Q
    |||||| |||||||||||| |||| |||| |||||| | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  347 cttttctctc 356  Q
    ||||||||||    
T  35522977 cttttctctc 35522986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 3434561 - 3434672
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| ||||||||| |||||| | ||||||||||||||||||| ||||||||| ||||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  3434661 ctcttttctctc 3434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 19436289 - 19436178
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||| ||||||||  |||||| ||||||||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  344 tctcttttctct 355  Q
    ||||||||||||    
T  19436189 tctcttttctct 19436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 19329850 - 19329952
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||  |||  |||| || ||||||||||||||||||||||||    
T  19329850 atacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttct 19329949  T
Q  354 ctc 356  Q
    |||    
T  19329950 ctc 19329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 36362025 - 36362135
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  345 ctcttttctct 355  Q
    |||||||||||    
T  36362125 ctcttttctct 36362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 36362014 - 36361904
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  345 ctcttttctct 355  Q
    |||||||||||    
T  36361914 ctcttttctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 3694388 - 3694477
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  3694388 cttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctc 3694477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 40957704 - 40957817
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || ||||||||||| |||||||||| ||||||   ||||| ||||||||||||||||||||||| ||||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  343 ttctcttttctctc 356  Q
    ||||||||||||||    
T  40957804 ttctcttttctctc 40957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 7389387 - 7389499
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| ||||||   ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  7389487 tctcttttctctc 7389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 36208171 - 36208283
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| |||||||||||  |||||||||||||||||   |||||||||||||||||| |||||| |||||||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  344 tctcttttctctc 356  Q
    ||||||| |||||    
T  36208271 tctctttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 8080485 - 8080373
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||||| |||||| | ||||||||| ||| ||||||||||||||| ||||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  8080385 tctcttttctctc 8080373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 46033902 - 46033791
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||||| |||||||||||| |||||| | ||| ||||||||| |||||||||||||||||||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  46033802 ctcttttctctc 46033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 38267048 - 38267150
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||| |||  |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  38267048 atacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 38267147  T
Q  354 ctc 356  Q
    |||    
T  38267148 ctc 38267150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 38837213 - 38837327
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||  ||||||||| |||||| | ||  ||||| ||||||||||||||||||| ||||  |||| || ||||||||||||    
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  38837313 tttctcttttctctc 38837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 346
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||  |||||||||||||||| || ||||||  |||| |||||||||||| ||||||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  342 tttct 346  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 32564526 - 32564422
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||||||||||||| |||||| |  ||||||||||||||||||||||||| ||||  ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  346 tcttt 350  Q
    |||||    
T  32564426 tcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 41915733 - 41915845
Alignment:
Q  238 ttttaaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagc 337  Q
    |||||| |||||||| ||||||| |||  ||||||||| |||||| |  |||||||| |||||||||||||||| |||| |||||||| || |||||||     
T  41915733 ttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagt 41915832  T
Q  338 acactttctcttt 350  Q
    |||||||||||||    
T  41915833 acactttctcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 4999606 - 4999504
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||| ||| |||||| |||||||||||||||||||||||||| |||| ||||  |||| || |||||| ||||||||||||||| |    
T  4999606 atacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttttat 4999507  T
Q  354 ctc 356  Q
    |||    
T  4999506 ctc 4999504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 8238203 - 8238317
Alignment:
Q  238 ttttaaaa-gagttattatacatagacattct-taggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaa 335  Q
    |||||||| ||||||| ||||||| |||  || ||||||| |||||| | |||||||||||||||||||||||||| || |||||||||| || ||||||    
T  8238203 ttttaaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaa 8238302  T
Q  336 gcacactttctcttt 350  Q
    | |||||||||||||    
T  8238303 gtacactttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 32951585 - 32951483
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||| |||||| ||  |||||||| ||| ||| |||||||||||||| |||||| ||||  |||| || ||||||||||||||||||||||||    
T  32951585 atacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttttct 32951486  T
Q  354 ctc 356  Q
    |||    
T  32951485 ctc 32951483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 35137545 - 35137643
Alignment:
Q  258 atagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||  ||||||||| |||||| | |||||||||||||||||||||| |||||| ||||  |||| || |||||| ||||||||||||||||||||    
T  35137545 atagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctc 35137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 340
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    ||||||| |||||||||||| ||||||||| || ||| | ||| ||||||||||||||||||||||||||| || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 22343360 - 22343465
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  345 ctcttt 350  Q
    ||||||    
T  22343460 ctcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 35468959 - 35468851
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||| | | |||  ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  35468859 tttctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 26296643 - 26296754
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||| ||||||||  |||| | | ||| ||| ||||| |||||||||| |||||| |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  26296743 ctcttttctctc 26296754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 38044195 - 38044301
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||  ||||||||| |||||| |  |||||| |||||||||||||||||| || | |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  344 tctcttt 350  Q
    |||||||    
T  38044295 tctcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 18207176 - 18207283
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| |||||||||||  ||||||||| |||||| || |||||||||| |||||||||| |||||||| ||  || | ||  |||||||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacac 18207274  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  18207275 tttctcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 31735884 - 31735987
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| ||||||   ||| |||||||||||||       ||||||| || |||||||| ||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa-------cacgtggccacatggatcccgcacaagcacactttc 31735976  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  31735977 tcttttctctc 31735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 349
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||  |||||| | |||||||| ||||||||||| |||||||| | || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  346 tctt 349  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 40846218 - 40846109
Alignment:
Q  241 taaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcaca 340  Q
    |||| ||||||| ||||||| |||| ||||||||| |||||| |  |||||| |||||||||||||| ||| || || ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  341 ctttctcttt 350  Q
    ||||||||||    
T  40846118 ctttctcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 41423682 - 41423786
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||||||||  |||| |||||||||| || |||||||  |||||||||||||||| |||||||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  346 tcttt 350  Q
    |||||    
T  41423782 tcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacac 312  Q
    ||||||| || |||||||||||  ||||||||| ||||||  | ||||||||||||||||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 16374893 - 16374820
Alignment:
Q  277 aatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||  |||||| ||||||||||||||||||||||||||  ||||||   ||||||||||| ||||||||    
T  16374893 aatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctcttt 16374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 12310905 - 12311008
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||  ||||||||| |||| ||||   || | ||| |||||||||||||| |||||||  ||||||||| ||||||||| |||    
T  12310905 agagttatgatacatagacacccttaggtggaaatatatctg--gatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcacatttt 12311002  T
Q  345 ctcttt 350  Q
     |||||    
T  12311003 atcttt 12311008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 39256023 - 39255953
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtgg 316  Q
    ||||||| |||||||||||  ||||||||| |||||| |  |||| ||||| |||||||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg 39255953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 2318320 - 2318239
Alignment:
Q  269 taggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||| || ||| || ||||||||||||||||||||||||  |||||||  |||| ||  || ||||| |||||||||||    
T  2318320 taggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 11044185 - 11044237
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacaccc 295  Q
    ||||||| || |||||||||||  ||||||||| |||||||| ||||||||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 28177775 - 28177885
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  28177875 tcttttctctc 28177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 2740273 - 2740384
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  2740373 ctcttttctctc 2740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 6679697 - 6679808
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  6679797 ctcttttctctc 6679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 33149730 - 33149628
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||||||||||||||| | |||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  33149730 atacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 33149631  T
Q  354 ctc 356  Q
    |||    
T  33149630 ctc 33149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 26720516 - 26720625
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||| ||||| ||| ||||||||||||||||| || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  346 tcttttctct 355  Q
    ||||||||||    
T  26720616 tcttttctct 26720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 26990265 - 26990374
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||| ||||| ||| ||||||||||||||||| || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  346 tcttttctct 355  Q
    ||||||||||    
T  26990365 tcttttctct 26990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 15409712 - 15409600
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| |||||||||||| ||||||||  |||||||  ||||||||||||||||||||||||||||| | || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  15409612 tctcttttctctc 15409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 13811660 - 13811762
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||  |||| || |||||||||||||||||||| |||    
T  13811660 atacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctct 13811759  T
Q  354 ctc 356  Q
    |||    
T  13811760 ctc 13811762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 35785207 - 35785309
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||| || |  ||||||| |||||| |||||||||||||||||    
T  35785207 atacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttttct 35785306  T
Q  354 ctc 356  Q
    |||    
T  35785307 ctc 35785309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 35943992 - 35943882
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||| || |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  346 tcttttctctc 356  Q
    ||||| |||||    
T  35943892 tctttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 14831822 - 14831924
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||| ||||||||||||||| ||||  ||||||| ||||||||||||||||| |||| |    
T  14831822 atacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctttttttt 14831921  T
Q  354 ctc 356  Q
    |||    
T  14831922 ctc 14831924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 18520976 - 18520874
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || |||||||||||||||||||||| |    
T  18520976 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttat 18520877  T
Q  354 ctc 356  Q
    |||    
T  18520876 ctc 18520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 2252269 - 2252164
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| |||| ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  345 ctcttt 350  Q
    ||||||    
T  2252169 ctcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 36733044 - 36732932
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  ||||||| | |||||| | ||||||||||||||||||||||||||| | ||||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  36732944 tctcttttctctc 36732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 3921368 - 3921261
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  343 ttctcttt 350  Q
    ||||||||    
T  3921268 ttctcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 40145415 - 40145517
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||| ||| ||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  40145415 atacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 40145514  T
Q  354 ctc 356  Q
    |||    
T  40145515 ctc 40145517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 31008984 - 31009097
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||| ||||||||  |||||||  ||  ||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  342 tttctcttttctct 355  Q
    ||||| ||| ||||    
T  31009084 tttctatttcctct 31009097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 42414379 - 42414295
Alignment:
Q  269 taggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 33825413 - 33825319
Alignment:
Q  257 catagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctctttt 351  Q
    ||||||||||||||||||| ||||||    |||||||||||| |||||||||||||||| |||| || | | | |||||||||||||||||||||    
T  33825413 catagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctctttt 33825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 39688999 - 39688893
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||  |||| |||| ||||||||  ||||||||||||||||||||||| | ||||||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  344 tctcttt 350  Q
    |||||||    
T  39688899 tctcttt 39688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 39557594 - 39557507
Alignment:
Q  269 taggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||||||||| || || ||| |||||||||||||||||||||| ||| ||||| ||   |||| ||||||||||||||| ||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctc 39557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 9603811 - 9603917
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || ||||||| |||| |||||||| |||||||    || ||||| ||||||||||||||||| |||||||||||| ||   |||| |||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  344 tctcttt 350  Q
    |||||||    
T  9603911 tctcttt 9603917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 38296200 - 38296304
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| ||||||||||  |||||||||  |||||| || || | ||||||||||||||| ||||||| |  |  |||||||  ||||||||||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  343 ttctc 347  Q
    |||||    
T  38296300 ttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 16327922 - 16328005
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||| ||||||||  |||||||||||| |||||||||||||||| |||| || | |   |||||||||||||| |||||    
T  16327922 cttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttcttt 16328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 10356642 - 10356698
Alignment:
Q  254 atacatagacattcttaggtggtaatacat-cttttgacacccacacaaaaatctga 309  Q
    |||||||||||| ||||||||| ||||||| |  |||||||||||||||||||||||    
T  10356642 atacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 36875695 - 36875644
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaat 305  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||    
T  36875695 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 21370048 - 21370114
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||| ||||||||||||| |||||||  |||| || |||||| |||| ||||||||| |||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctc 21370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 31132392 - 31132454
Alignment:
Q  294 ccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||||||||||||| || ||||  |||| || ||||||||| ||||| |||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttctctc 31132454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 248 - 356
Target Start/End: Complemental strand, 10621185 - 10621077
Alignment:
Q  248 gttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctc 347  Q
    ||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  348 ttttctctc 356  Q
    |||||||||    
T  10621085 ttttctctc 10621077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 1180032 - 1179930
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  1180032 atacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttttct 1179933  T
Q  354 ctc 356  Q
    |||    
T  1179932 ctc 1179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 43414681 - 43414571
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||| ||| || ||| | |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  43414581 tcttttctctc 43414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 5957838 - 5957940
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  ||||||| |||||| |||||||||||||| ||    
T  5957838 atacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcct 5957937  T
Q  354 ctc 356  Q
    |||    
T  5957938 ctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 15197341 - 15197443
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  15197341 atacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 15197440  T
Q  354 ctc 356  Q
    |||    
T  15197441 ctc 15197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 34012388 - 34012286
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||||||||||||||| | |||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  34012388 atacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 34012289  T
Q  354 ctc 356  Q
    |||    
T  34012288 ctc 34012286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 504213 - 504111
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||  |||| || |||||||||||| |||||||||||    
T  504213 atacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttttct 504114  T
Q  354 ctc 356  Q
    |||    
T  504113 ctc 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 14547930 - 14548032
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  14547930 atacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 14548029  T
Q  354 ctc 356  Q
    |||    
T  14548030 ctc 14548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 37038478 - 37038589
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || ||||||||||||  |||||||| |||||| | ||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  345 ctcttttctctc 356  Q
    || ||| |||||    
T  37038578 ctatttcctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 12831055 - 12831157
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  12831055 atacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 12831154  T
Q  354 ctc 356  Q
    |||    
T  12831155 ctc 12831157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 23122689 - 23122587
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  |||| |||| |||||| ||||||||||||||||||||||||||||||| ||||  |||| || ||| ||||||||||||||||||||    
T  23122689 atacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttttct 23122590  T
Q  354 ctc 356  Q
    |||    
T  23122589 ctc 23122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 40424035 - 40423933
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||| |  ||||||||| |||||| | ||||||| ||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  40424035 atacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttct 40423936  T
Q  354 ctc 356  Q
    |||    
T  40423935 ctc 40423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 15048281 - 15048177
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||| ||||||||||||||||||| | || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  346 tctttt 351  Q
    ||||||    
T  15048182 tctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 32032724 - 32032828
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| |||  ||||||||| |||||||| || |||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  345 ctcttt 350  Q
    ||||||    
T  32032823 ctcttt 32032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 4854965 - 4854853
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||| ||||||||| |||||| | ||| ||||| ||| |||||||||| | |||| || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  4854865 tctcttttctctc 4854853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 16056505 - 16056397
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||| |||| |||  ||||||||  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  16056405 tttctcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 16383373 - 16383481
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  16383473 tttctcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 24307895 - 24307789
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||  ||||||||| ||||||||  ||||||||||||||||||||||| | |||| |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  344 tctcttt 350  Q
    |||||||    
T  24307795 tctcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 44507188 - 44507077
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  ||||||||||||||||   ||| ||||||||||||||||||||||||| ||||  |||| || | ||||||| |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  44507088 ctcttttctctc 44507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 34307214 - 34307320
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||  ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  344 tctcttt 350  Q
    |||||||    
T  34307314 tctcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 15259031 - 15258919
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||||| | |||||| ||| ||||||||  | |||| ||||| |||||||||||| |||||||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  344 tctcttttctctc 356  Q
    ||||||| |||||    
T  15258931 tctctttcctctc 15258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 10284734 - 10284627
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    |||||||||| |||||||||||  |||| |||  ||||||   |||||||||||||||||||| |||||||| ||||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  343 ttctcttt 350  Q
    ||||||||    
T  10284634 ttctcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 9122229 - 9122295
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    |||||||||||||||||||||| || ||||  ||||||| |||||||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctc 9122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 8841511 - 8841422
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||| | |||| | |||||||||||||||||||||| |||||| ||||  |||| || ||||||||||||||||||||| |||||    
T  8841511 cttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 24307625 - 24307708
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatgga 325  Q
    ||||||||||| ||||||| |||  ||||||||| ||||||||  ||||||||||||||||||||||| | |||| ||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatgga 24307708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 42221513 - 42221619
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || ||||||| |||| ||||||||  |||||||   | ||||||||||||||||||||||||||  ||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  344 tctcttt 350  Q
    |||||||    
T  42221613 tctcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 38229429 - 38229537
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||  ||| |||||||||| |||||  ||  |||||||||||||||||||||||| |||||||  ||||| ||| ||||||||| ||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacg-ctcctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttc 38229527  T
Q  346 tcttttctct 355  Q
    ||||| ||||    
T  38229528 tctttcctct 38229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 30479574 - 30479470
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||  ||||||||| |||||| | ||||||| ||||| |||||||||||| ||||  ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  346 tcttt 350  Q
    |||||    
T  30479474 tcttt 30479470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 20075026 - 20074933
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||| ||||||||| ||||||   ||||||||||||| |||||| |||||||        |||| |||||||||||||||||||||||| ||    
T  20075026 atacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacg--------tggaccctgcacaagcacactttctctttcct 20074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 17443824 - 17443929
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||  ||||||||  ||||||  | || |||| ||||||||||||||||| || ||||| |||| ||  |||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  345 ctcttt 350  Q
    ||||||    
T  17443924 ctcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 40574779 - 40574889
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||  |  | |||||||| | ||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  40574879 tcttttctctc 40574889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 50052532 - 50052418
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  342 tttctcttttctctc 356  Q
    ||||||||| |||||    
T  50052432 tttctctttcctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 6034052 - 6034154
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | |||||||||||||||||||||||||| || ||||  ||||||| ||||||||||||||||||||||||    
T  6034052 atacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttct 6034151  T
Q  354 ctc 356  Q
    |||    
T  6034152 ctc 6034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 41236355 - 41236457
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  41236355 atacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 41236454  T
Q  354 ctc 356  Q
    |||    
T  41236455 ctc 41236457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 42044471 - 42044357
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||  ||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  42044371 tttctcttttctctc 42044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 55475189 - 55475295
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||| ||||||||| |||||| | |||||||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  344 tctcttt 350  Q
    |||||||    
T  55475289 tctcttt 55475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 50813993 - 50813888
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  345 ctcttt 350  Q
    ||||||    
T  50813893 ctcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 48183151 - 48183039
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || |||||||||||  |||| |||| |||||| | ||||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  344 tctcttttctctc 356  Q
    |||||||||||||    
T  48183051 tctcttttctctc 48183039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 480551 - 480437
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    |||||||| || |||||||||||  ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  480451 tttctcttttctctc 480437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 29548061 - 29547955
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||  ||||||||||||||||||||||||| |||| ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  344 tctcttt 350  Q
    | |||||    
T  29547961 tttcttt 29547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 31910192 - 31910302
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| |||||||||||| ||||||||  ||||||   ||||||||||||||||||||||||||| | | || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  346 tcttttctctc 356  Q
    |||||||||||    
T  31910292 tcttttctctc 31910302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 32766956 - 32767062
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| ||||||| ||| |||||||||| |||||| |  |||||||||| |||||||||||||| |||| |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  344 tctcttt 350  Q
    |||||||    
T  32767056 tctcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 11511554 - 11511453
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||| |||||| | ||||||||||||| ||||||||||||||| ||||  |||| || ||||||||||||||||||||||||    
T  11511554 atacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttct 11511455  T
Q  354 ct 355  Q
    ||    
T  11511454 ct 11511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 50526263 - 50526161
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||||  |||||||| |||||| | ||||||||||||||||||||||||||||||||||  ||||| | |||||||||| |||||| ||| ||    
T  50526263 atacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcct 50526164  T
Q  354 ctc 356  Q
    |||    
T  50526163 ctc 50526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 356
Target Start/End: Complemental strand, 56300233 - 56300155
Alignment:
Q  278 atacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctc 56300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 47986207 - 47986312
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| |||  ||||||||| ||||||||  |||||| |||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  345 ctcttt 350  Q
    ||||||    
T  47986307 ctcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 19670820 - 19670712
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| ||||||| |||  ||||||||| |||||| |  ||||||| ||||||||||||||||| |||| |||||||| || ||||||| ||||    
T  19670820 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 19670721  T
Q  342 tttctcttt 350  Q
    |||||||||    
T  19670720 tttctcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 356
Target Start/End: Original strand, 41823926 - 41823992
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctc 41823992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 54473625 - 54473523
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||  |||||| | |||||||||||||||||||||| |||||| ||||  |||| || ||||||||||||||| ||||||||    
T  54473625 atacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttttct 54473526  T
Q  354 ctc 356  Q
    |||    
T  54473525 ctc 54473523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 29239883 - 29239996
Alignment:
Q  243 aaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacact 342  Q
    ||||||| || |||||||||||  ||||||||| |||||| | ||||||| |||||||||||||| |||||| ||||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  343 ttctcttttctctc 356  Q
    |||||||| |||||    
T  29239983 ttctctttcctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 8343263 - 8343159
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||| |||| ||||||||| |||||||| ||||||||| ||| |||||||||||| |||| |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  346 tcttt 350  Q
    |||||    
T  8343163 tcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 17983822 - 17983739
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||| |||||| |  ||||||||||||||||||||||||| |||| |||||||| || ||||||| |||||||||||||    
T  17983822 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 29234346 - 29234235
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    ||||| || |||||||||||  ||||| ||| |||||| | ||||| |||  |||||||||||||||||| ||||  |||| || |||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  345 ctcttttctctc 356  Q
    ||||||||||||    
T  29234246 ctcttttctctc 29234235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 29977908 - 29977989
Alignment:
Q  269 taggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||| |||||| |  || ||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 24995186 - 24995097
Alignment:
Q  267 cttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctctc 356  Q
    ||||| ||| |||||| | ||||||||||||| |||||| |||||||| ||||  |||| || ||||||||||| |||||||||||||||    
T  24995186 cttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttttctctc 24995097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 55079814 - 55079709
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatgga-tcctgcacaagcacacttt 344  Q
    ||||||| ||||||| |||  ||||||||| |||||| || |||||||||| |||||||||||||| |||| ||||||||  ||  |||||| |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  345 ctcttt 350  Q
    ||||||    
T  55079714 ctcttt 55079709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 350
Target Start/End: Original strand, 3481662 - 3481758
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||   |||||||| ||||||   ||||||||||||||||||||||||||| | ||||  |||| ||  ||||||||||||||||||||    
T  3481662 atacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 53352657 - 53352556
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||  ||||||||  |||||||  ||| ||||| ||||||||||||||||||| || |  |||| || ||||||||| ||||||||||||||    
T  53352657 atacatagacacccttaggtgc-aatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttttct 53352559  T
Q  354 ctc 356  Q
    |||    
T  53352558 ctc 53352556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 44536846 - 44536742
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| ||||||| ||| | |||||||| |||||| | || |||| |||||||||||||||||| |||||||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  345 ctcttt 350  Q
    ||||||    
T  44536747 ctcttt 44536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 23608233 - 23608345
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || ||| |||||||  ||||| ||  |||||| | ||||||||||||||||||||||||||||| ||||  || |  |  |||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  344 tctcttttctctc 356  Q
    |||||||| ||||    
T  23608333 tctcttttatctc 23608345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 48647828 - 48647716
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    ||||||||| | ||||| |||| |||||||   |||||| || || ||||||||| |||||||| |||||||||||  ||||  | ||||||||||| ||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatt 48647729  T
Q  344 tctcttttctctc 356  Q
    ||||||| |||||    
T  48647728 tctctttcctctc 48647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 29589799 - 29589736
Alignment:
Q  287 ttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||||||||||||||||| | |||| |||||||| ||  |||||| |||||||||||||    
T  29589799 ttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 28480369 - 28480267
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||  ||||||||  ||||||  | || |||| ||||||||||||||||| || ||||| |||| ||  ||||| ||||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  345 ctc 347  Q
    |||    
T  28480269 ctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 28481244 - 28481142
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||  ||||||||  ||||||  | || |||| ||||||||||||||||| || ||||| |||| ||  ||||| ||||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  345 ctc 347  Q
    |||    
T  28481144 ctc 28481142  T

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Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 28482119 - 28482017
Alignment:
Q  245 agagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacacttt 344  Q
    |||||||| |||||||||||  ||||||||  ||||||  | || |||| ||||||||||||||||| || ||||| |||| ||  ||||| ||||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  345 ctc 347  Q
    |||    
T  28482019 ctc 28482017  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 47104542 - 47104648
Alignment:
Q  244 aagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactt 343  Q
    |||||| || ||| |||||||||||||| ||  ||||||   | |||||||||||||||||| |||||||||||  ||| || ||  ||||| |||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactt 47104641  T
Q  344 tctcttt 350  Q
    |||||||    
T  47104642 tctcttt 47104648  T

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Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 29535377 - 29535480
Alignment:
Q  246 gagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttc 345  Q
    ||||||| ||||||||||| |||||||||  ||||||||| |||  | |||||||||||| || ||| ||| ||  |||||||  ||||| |||||||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttc 29535475  T
Q  346 tcttt 350  Q
    |||||    
T  29535476 tcttt 29535480  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Original strand, 18769153 - 18769183
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcat 320  Q
    |||||||||||||||||||||||||||||||    
T  18769153 acacccacacaaaaatctgacacgtggtcat 18769183  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 18769103 - 18769043
Alignment:
Q  290 acacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    |||||||||||||||||||||| |||||||| |  ||||  ||||| |||| |||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctcttt 18769043  T

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Target: scaffold0321 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 10213 - 10099
Alignment:
Q  242 aaaagagttattatacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacac 341  Q
    ||||||||||| |||||||||||   |||||||| |||||||| ||||||| ||||| ||||||||||||||| ||||  |||| |  | ||||||||||    
T  10213 aaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacac 10114  T
Q  342 tttctcttttctctc 356  Q
    |||||||||||||||    
T  10113 tttctcttttctctc 10099  T

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Target: scaffold0237 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 4037 - 4138
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    |||||||||||   |||| ||| |||||| ||||| ||||||||||||||||||||||||| || |  ||||||| ||| ||||||||||||||||||||    
T  4037 atacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttct 4136  T
Q  354 ct 355  Q
    ||    
T  4137 ct 4138  T

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Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 152539 - 152602
Alignment:
Q  287 ttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttt 350  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||    
T  152539 ttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

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Target: scaffold1268 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 1021 - 919
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||||  |||||||| |||||| | ||| ||| ||||||||||| ||||||||| ||||  || |||| ||||||||||||||||||||| ||    
T  1021 atacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcct 922  T
Q  354 ctc 356  Q
    |||    
T  921 ctc 919  T

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Target: scaffold1267 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 1021 - 919
Alignment:
Q  254 atacatagacattcttaggtggtaatacatcttttgacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttct 353  Q
    ||||||||||||  |||||||| |||||| | ||| ||| ||||||||||| ||||||||| ||||  || |||| ||||||||||||||||||||| ||    
T  1021 atacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcct 922  T
Q  354 ctc 356  Q
    |||    
T  921 ctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 17097 - 17163
Alignment:
Q  289 gacacccacacaaaaatctgacacgtggtcatatggatcctgcacaagcacactttctcttttctct 355  Q
    |||| |||||||||||||||||| ||||||| ||||| || ||||||||||| ||||||||| ||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctct 17163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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