View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5067_low_12 (Length: 352)

Name: NF5067_low_12
Description: NF5067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5067_low_12
NF5067_low_12
[»] chr8 (50 HSPs)
chr8 (1-338)||(9700097-9700434)
chr8 (4-61)||(16162859-16162916)
chr8 (1-62)||(1117403-1117464)
chr8 (4-59)||(44236739-44236794)
chr8 (18-64)||(31891924-31891970)
chr8 (4-45)||(1664468-1664509)
chr8 (4-60)||(10075468-10075524)
chr8 (4-63)||(7918694-7918752)
chr8 (28-63)||(27493060-27493095)
chr8 (6-61)||(31884854-31884909)
chr8 (5-59)||(7008698-7008752)
chr8 (4-62)||(14926895-14926953)
chr8 (6-56)||(18331815-18331865)
chr8 (1-55)||(29592488-29592542)
chr8 (4-66)||(31862591-31862652)
chr8 (4-58)||(43368617-43368671)
chr8 (1-58)||(4763990-4764047)
chr8 (4-61)||(7714341-7714398)
chr8 (4-56)||(10488562-10488614)
chr8 (1-61)||(20186378-20186438)
chr8 (1-61)||(20205445-20205505)
chr8 (8-64)||(33553343-33553399)
chr8 (25-61)||(38602447-38602483)
chr8 (7-59)||(43043770-43043822)
chr8 (4-60)||(43393687-43393743)
chr8 (21-64)||(16825454-16825497)
chr8 (25-64)||(30251365-30251404)
chr8 (25-64)||(37461261-37461300)
chr8 (12-59)||(42215216-42215263)
chr8 (6-60)||(6526167-6526221)
chr8 (4-62)||(7648063-7648121)
chr8 (18-56)||(9130238-9130276)
chr8 (6-60)||(25872340-25872394)
chr8 (1-43)||(29592129-29592171)
chr8 (4-45)||(1889065-1889106)
chr8 (6-51)||(6950423-6950468)
chr8 (12-57)||(10062059-10062104)
chr8 (4-41)||(24326130-24326167)
chr8 (17-62)||(38874817-38874862)
chr8 (18-59)||(43045641-43045682)
chr8 (6-54)||(1561378-1561426)
chr8 (4-64)||(2487919-2487979)
chr8 (8-64)||(2606152-2606208)
chr8 (7-55)||(4560604-4560652)
chr8 (5-61)||(10437983-10438039)
chr8 (15-59)||(29699381-29699425)
chr8 (4-64)||(30191052-30191112)
chr8 (8-56)||(34770971-34771019)
chr8 (6-38)||(39049373-39049405)
chr8 (6-50)||(39881646-39881690)
[»] chr3 (43 HSPs)
chr3 (1-61)||(51929837-51929897)
chr3 (4-61)||(44014712-44014769)
chr3 (11-58)||(40240738-40240785)
chr3 (4-56)||(21872214-21872266)
chr3 (6-62)||(25459543-25459599)
chr3 (4-56)||(50211834-50211886)
chr3 (11-58)||(11041376-11041423)
chr3 (18-56)||(24684741-24684779)
chr3 (18-55)||(584159-584196)
chr3 (4-57)||(11253600-11253653)
chr3 (1-58)||(49845457-49845514)
chr3 (8-56)||(31512486-31512534)
chr3 (4-56)||(36189728-36189780)
chr3 (11-51)||(41644369-41644409)
chr3 (4-64)||(45541670-45541730)
chr3 (4-56)||(45590750-45590802)
chr3 (8-64)||(53891806-53891862)
chr3 (1-44)||(2304202-2304245)
chr3 (8-59)||(3622364-3622415)
chr3 (1-56)||(22055651-22055705)
chr3 (12-43)||(23326123-23326154)
chr3 (1-56)||(44295623-44295678)
chr3 (4-43)||(48807798-48807837)
chr3 (4-62)||(2100092-2100150)
chr3 (8-50)||(27795938-27795980)
chr3 (1-63)||(34958389-34958451)
chr3 (4-62)||(41057254-41057312)
chr3 (27-64)||(5407365-5407402)
chr3 (1-62)||(32663734-32663795)
chr3 (8-49)||(39769640-39769681)
chr3 (6-43)||(49465869-49465906)
chr3 (7-56)||(49916564-49916613)
chr3 (17-62)||(53762307-53762352)
chr3 (28-64)||(1820043-1820079)
chr3 (27-63)||(15304280-15304316)
chr3 (4-56)||(20210847-20210899)
chr3 (4-44)||(22667502-22667542)
chr3 (4-44)||(22724141-22724181)
chr3 (1-57)||(37138378-37138434)
chr3 (18-62)||(39980842-39980886)
chr3 (10-50)||(41848641-41848681)
chr3 (8-56)||(50760694-50760742)
chr3 (8-52)||(52440584-52440628)
[»] chr1 (51 HSPs)
chr1 (1-57)||(52013983-52014039)
chr1 (1-64)||(10199319-10199382)
chr1 (1-55)||(6659776-6659830)
chr1 (4-58)||(33723299-33723353)
chr1 (4-62)||(15558310-15558368)
chr1 (8-53)||(2832075-2832120)
chr1 (1-54)||(29793619-29793672)
chr1 (1-61)||(9602568-9602628)
chr1 (4-64)||(14128382-14128442)
chr1 (4-60)||(32515356-32515412)
chr1 (4-64)||(43420357-43420417)
chr1 (6-57)||(1565064-1565115)
chr1 (4-63)||(21002254-21002313)
chr1 (4-62)||(24460314-24460372)
chr1 (1-62)||(4276563-4276624)
chr1 (1-62)||(26866409-26866470)
chr1 (5-53)||(2522696-2522744)
chr1 (4-56)||(3319865-3319917)
chr1 (6-54)||(11893514-11893562)
chr1 (6-50)||(15515657-15515701)
chr1 (4-44)||(24279848-24279888)
chr1 (2-54)||(49282635-49282686)
chr1 (25-64)||(2295311-2295350)
chr1 (6-61)||(7217988-7218043)
chr1 (1-56)||(28467529-28467584)
chr1 (8-55)||(42550298-42550345)
chr1 (6-56)||(6292593-6292643)
chr1 (18-64)||(15477666-15477712)
chr1 (6-56)||(24313595-24313645)
chr1 (19-57)||(30013997-30014035)
chr1 (4-54)||(32859868-32859918)
chr1 (7-57)||(32958739-32958789)
chr1 (6-44)||(35017683-35017721)
chr1 (27-57)||(37431858-37431888)
chr1 (18-60)||(40303994-40304036)
chr1 (17-55)||(42575389-42575427)
chr1 (5-54)||(4757438-4757487)
chr1 (6-43)||(6231748-6231785)
chr1 (8-53)||(29723592-29723637)
chr1 (1-62)||(29793853-29793914)
chr1 (7-56)||(33975676-33975725)
chr1 (4-45)||(37593614-37593655)
chr1 (19-56)||(50644174-50644211)
chr1 (6-58)||(4033934-4033986)
chr1 (4-44)||(9507330-9507370)
chr1 (6-62)||(17269351-17269407)
chr1 (1-45)||(25944537-25944581)
chr1 (20-56)||(29045852-29045888)
chr1 (4-44)||(31517671-31517711)
chr1 (30-62)||(36523201-36523233)
chr1 (6-58)||(37241738-37241789)
[»] chr7 (39 HSPs)
chr7 (1-64)||(529458-529521)
chr7 (11-63)||(17988945-17988997)
chr7 (4-56)||(23214954-23215006)
chr7 (4-56)||(40598404-40598456)
chr7 (1-44)||(8094402-8094445)
chr7 (18-64)||(25596145-25596191)
chr7 (7-56)||(1418521-1418570)
chr7 (4-57)||(29363607-29363660)
chr7 (4-60)||(8427112-8427168)
chr7 (12-56)||(31341242-31341286)
chr7 (4-64)||(33894726-33894786)
chr7 (18-62)||(40252036-40252080)
chr7 (1-61)||(44289957-44290017)
chr7 (9-56)||(5276594-5276641)
chr7 (25-76)||(37064367-37064418)
chr7 (3-54)||(46091691-46091742)
chr7 (7-57)||(3019885-3019935)
chr7 (9-55)||(7513663-7513709)
chr7 (4-62)||(12234802-12234860)
chr7 (4-66)||(17942170-17942232)
chr7 (28-66)||(28727672-28727710)
chr7 (1-55)||(32791665-32791719)
chr7 (18-55)||(25659805-25659842)
chr7 (4-57)||(28691754-28691807)
chr7 (13-50)||(29269474-29269511)
chr7 (5-54)||(39542221-39542270)
chr7 (7-56)||(46281061-46281110)
chr7 (12-57)||(47046026-47046071)
chr7 (28-60)||(4970707-4970739)
chr7 (6-58)||(24363517-24363569)
chr7 (6-61)||(28128316-28128369)
chr7 (1-57)||(29287322-29287378)
chr7 (25-57)||(30134252-30134284)
chr7 (4-56)||(30751618-30751670)
chr7 (18-62)||(34083521-34083565)
chr7 (18-62)||(36517690-36517734)
chr7 (28-64)||(40371565-40371601)
chr7 (6-62)||(40734731-40734787)
chr7 (4-56)||(47041958-47042010)
[»] chr6 (37 HSPs)
chr6 (4-67)||(12111066-12111129)
chr6 (1-62)||(4325218-4325279)
chr6 (4-59)||(2460067-2460122)
chr6 (1-45)||(6742907-6742951)
chr6 (1-57)||(10016719-10016775)
chr6 (4-51)||(3738200-3738247)
chr6 (18-60)||(32205928-32205970)
chr6 (5-62)||(8010457-8010514)
chr6 (12-57)||(34531507-34531552)
chr6 (4-56)||(34403954-34404006)
chr6 (11-43)||(34429646-34429678)
chr6 (4-56)||(35070386-35070438)
chr6 (18-57)||(835179-835218)
chr6 (8-59)||(32861645-32861696)
chr6 (8-38)||(316750-316780)
chr6 (6-56)||(7148767-7148817)
chr6 (19-57)||(9202903-9202941)
chr6 (4-54)||(26559160-26559210)
chr6 (6-56)||(33737831-33737881)
chr6 (18-59)||(103543-103584)
chr6 (6-55)||(738461-738510)
chr6 (8-57)||(2727801-2727850)
chr6 (4-56)||(8420115-8420168)
chr6 (4-61)||(30863345-30863402)
chr6 (1-54)||(31327527-31327580)
chr6 (18-51)||(31338090-31338123)
chr6 (4-45)||(32917296-32917337)
chr6 (18-62)||(848102-848145)
chr6 (1-45)||(3217042-3217086)
chr6 (11-63)||(7485051-7485103)
chr6 (4-56)||(7901750-7901802)
chr6 (28-64)||(9109025-9109061)
chr6 (8-56)||(13908343-13908391)
chr6 (4-60)||(21959800-21959855)
chr6 (4-44)||(29052850-29052890)
chr6 (25-61)||(30536879-30536915)
chr6 (8-56)||(31776191-31776239)
[»] chr5 (47 HSPs)
chr5 (1-64)||(9174912-9174975)
chr5 (1-54)||(31723901-31723954)
chr5 (4-60)||(40335788-40335844)
chr5 (1-64)||(8651263-8651326)
chr5 (5-64)||(11153357-11153416)
chr5 (18-64)||(7705909-7705955)
chr5 (6-59)||(25705575-25705628)
chr5 (10-62)||(14599285-14599337)
chr5 (10-58)||(26004914-26004962)
chr5 (4-56)||(36796626-36796678)
chr5 (13-60)||(6938648-6938695)
chr5 (4-63)||(41277274-41277333)
chr5 (4-58)||(25720334-25720388)
chr5 (4-45)||(444021-444062)
chr5 (6-55)||(13508541-13508590)
chr5 (8-57)||(34198524-34198573)
chr5 (1-58)||(35135569-35135626)
chr5 (27-64)||(35299887-35299924)
chr5 (6-54)||(10771809-10771857)
chr5 (10-54)||(11615575-11615619)
chr5 (6-54)||(14706205-14706253)
chr5 (18-58)||(16937800-16937840)
chr5 (1-56)||(11105001-11105056)
chr5 (25-64)||(14331486-14331525)
chr5 (8-59)||(17368775-17368826)
chr5 (8-43)||(41112830-41112865)
chr5 (4-54)||(2092458-2092508)
chr5 (18-56)||(8820873-8820911)
chr5 (8-58)||(17369306-17369356)
chr5 (4-45)||(1899252-1899293)
chr5 (15-52)||(5946487-5946524)
chr5 (12-57)||(6717221-6717266)
chr5 (4-57)||(11297114-11297167)
chr5 (4-45)||(11457197-11457238)
chr5 (6-43)||(32172754-32172791)
chr5 (26-63)||(39594928-39594965)
chr5 (25-57)||(6715869-6715901)
chr5 (6-62)||(10391443-10391499)
chr5 (1-57)||(10638453-10638509)
chr5 (25-61)||(10640073-10640109)
chr5 (6-58)||(10798341-10798393)
chr5 (12-60)||(18897633-18897681)
chr5 (7-55)||(21782576-21782624)
chr5 (4-44)||(34117479-34117519)
chr5 (1-61)||(38028632-38028692)
chr5 (4-44)||(39257325-39257365)
chr5 (12-60)||(42034167-42034215)
[»] chr4 (44 HSPs)
chr4 (1-56)||(56186817-56186872)
chr4 (3-57)||(18512433-18512487)
chr4 (7-62)||(21953375-21953430)
chr4 (4-59)||(27123268-27123323)
chr4 (6-57)||(28615435-28615486)
chr4 (4-54)||(32420979-32421029)
chr4 (7-56)||(24193634-24193683)
chr4 (4-56)||(46187828-46187880)
chr4 (25-60)||(17822780-17822815)
chr4 (12-54)||(3637299-3637341)
chr4 (4-62)||(7367967-7368025)
chr4 (18-64)||(18815136-18815182)
chr4 (4-54)||(25896883-25896933)
chr4 (18-60)||(39691064-39691106)
chr4 (4-62)||(47399584-47399642)
chr4 (4-53)||(1017127-1017176)
chr4 (19-64)||(23319965-23320010)
chr4 (1-54)||(50746071-50746124)
chr4 (8-44)||(1075561-1075597)
chr4 (1-57)||(17975255-17975311)
chr4 (13-61)||(22662165-22662213)
chr4 (13-61)||(22666644-22666692)
chr4 (18-62)||(35571544-35571588)
chr4 (4-56)||(55870261-55870313)
chr4 (4-55)||(2977896-2977947)
chr4 (25-64)||(27043741-27043780)
chr4 (29-64)||(42403934-42403969)
chr4 (3-62)||(47146042-47146101)
chr4 (4-42)||(18628486-18628524)
chr4 (4-54)||(19429391-19429441)
chr4 (4-57)||(11264400-11264453)
chr4 (4-45)||(30338545-30338586)
chr4 (3-56)||(32421198-32421251)
chr4 (35-64)||(41512769-41512798)
chr4 (1-62)||(52333694-52333755)
chr4 (18-59)||(54426156-54426197)
chr4 (6-62)||(22772389-22772445)
chr4 (4-56)||(22796754-22796806)
chr4 (10-50)||(25487482-25487522)
chr4 (12-64)||(29126174-29126226)
chr4 (26-62)||(32769500-32769536)
chr4 (16-56)||(37575855-37575895)
chr4 (19-63)||(44638138-44638182)
chr4 (18-62)||(55414326-55414370)
[»] chr2 (49 HSPs)
chr2 (7-64)||(28810363-28810420)
chr2 (1-58)||(41170706-41170763)
chr2 (4-64)||(9996837-9996897)
chr2 (4-60)||(15370238-15370294)
chr2 (8-57)||(15120286-15120335)
chr2 (6-62)||(2964722-2964778)
chr2 (4-56)||(13866977-13867029)
chr2 (8-64)||(33931481-33931537)
chr2 (18-61)||(449960-450003)
chr2 (8-63)||(10563472-10563527)
chr2 (6-56)||(35329737-35329787)
chr2 (8-66)||(43259938-43259996)
chr2 (4-57)||(6547988-6548041)
chr2 (4-64)||(2790337-2790397)
chr2 (1-57)||(3078526-3078582)
chr2 (4-56)||(11513995-11514047)
chr2 (4-56)||(22878197-22878249)
chr2 (4-60)||(28803445-28803501)
chr2 (4-52)||(33981222-33981270)
chr2 (4-56)||(35713286-35713338)
chr2 (1-56)||(36677748-36677804)
chr2 (8-44)||(39567945-39567981)
chr2 (4-60)||(40759259-40759315)
chr2 (6-61)||(12313087-12313142)
chr2 (4-43)||(14302921-14302960)
chr2 (18-57)||(18179062-18179101)
chr2 (28-62)||(26202151-26202185)
chr2 (1-43)||(29430854-29430896)
chr2 (9-62)||(1830143-1830196)
chr2 (18-59)||(5043476-5043517)
chr2 (27-64)||(7928209-7928246)
chr2 (12-57)||(24097916-24097961)
chr2 (26-59)||(27317500-27317533)
chr2 (18-59)||(33503111-33503152)
chr2 (1-50)||(35809963-35810012)
chr2 (18-59)||(37448693-37448734)
chr2 (6-59)||(43569808-43569861)
chr2 (4-64)||(757548-757608)
chr2 (18-54)||(1633421-1633457)
chr2 (26-62)||(4607046-4607082)
chr2 (26-62)||(6772446-6772482)
chr2 (5-45)||(14666648-14666688)
chr2 (4-44)||(25609895-25609935)
chr2 (13-57)||(30990357-30990401)
chr2 (6-38)||(31739919-31739951)
chr2 (10-62)||(35378445-35378497)
chr2 (6-54)||(35810726-35810774)
chr2 (4-60)||(37276843-37276899)
chr2 (4-64)||(38767493-38767553)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-61)||(159887-159947)
[»] scaffold0199 (1 HSPs)
scaffold0199 (4-45)||(6909-6950)
[»] scaffold0147 (1 HSPs)
scaffold0147 (5-50)||(12641-12686)
[»] scaffold0141 (1 HSPs)
scaffold0141 (4-60)||(9693-9749)


Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 9700097 - 9700434
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtgatgggaattatatcattttttcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700097 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtgatgggaattatatcattttttcac 9700196  T
Q  101 gccgcattgttatttttatatttttcaggcaactggaaacgtgcttatgcagctgttaagcattttgttgaatgcctgatttctaattatgatcctaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700197 gccgcattgttatttttatatttttcaggcaactggaaacgtgcttatgcagctgttaagcattttgttgaatgcctgatttctaattatgatcctaaaa 9700296  T
Q  201 agagacagatcaccaaaaggaatggtcttccaagtatcatattgtcagattatttagaaggccgtatgccaaaaagttcgcaagataagggatttaattg 300  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700297 agagacagatcaccagaaggaatggtcttccaagtatcatattgtcagattatttagaaggccgtatgccaaaaagttcgcaagataagggatttaattg 9700396  T
Q  301 gagtggggatgttgcgtcaatcacttcattttcacagg 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9700397 gagtggggatgttgcgtcaatcacttcattttcacagg 9700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16162859 - 16162916
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  16162859 agtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 16162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1117403 - 1117464
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||| |||||    
T  1117403 aatagtctcacaagtgtttatgctagtatataagttcaagtaagtcaatccaaacaagccct 1117464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 44236794 - 44236739
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||    
T  44236794 agtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 31891924 - 31891970
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31891924 ttatgctagtagataaactcaaataaattaatccaaacaggccctta 31891970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1664468 - 1664509
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  1664468 agtctcacaagtgtttatgctagtagataaactcaaataagt 1664509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 10075524 - 10075468
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||||||    
T  10075524 agtctcgcaagtatttatgccagtagataaactcaaataagttaatcgaaacaggcc 10075468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 7918752 - 7918694
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    ||||||||||||||||||||||||||||||| | |||||| | ||| |||||||||||||    
T  7918752 agtctcacaagtgtttatgctagtagataagtttaaataa-tcaattcaaacaggccctt 7918694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 27493060 - 27493095
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggccctt 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  27493060 agataagctcaaataagttaatccaaacaggccctt 27493095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 31884909 - 31884854
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| ||||||||||||||||||||||||||   ||||||| |||||||    
T  31884909 tctcacaagtgcttatgctagtagataagctcaaataacgcaatccaagcaggccc 31884854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 7008698 - 7008752
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  7008698 gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaacaggc 7008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 14926953 - 14926895
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||| |||||| |||| ||||| |||||||||| |||||||||| |||||    
T  14926953 agtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaacaagccct 14926895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 18331815 - 18331865
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaaca 18331865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29592542 - 29592488
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||||||||||||| ||| | |||| |||||||||||||| |||||||||    
T  29592542 aatagtctcacaagtgtttgtgcaaatagacaagctcaaataagtcaatccaaac 29592488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 31862591 - 31862652
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 66  Q
    ||||| ||||||| | ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  31862591 agtctaacaagtgataatgctagtaga-aagctcaaataagtcaattcaaacaggcccttact 31862652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 43368671 - 43368617
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||| || ||||| ||||||||||| |||||||||| ||||||||||||    
T  43368671 agtctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacagg 43368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4763990 - 4764047
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||| | ||| |||||||||| |||||| |||||||||| ||||||||||||    
T  4763990 aatagtctcataggtgcttatgctagtggataagttcaaataagtcaatccaaacagg 4764047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 7714341 - 7714398
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||||||||||  | || |||||||||||||||| |||||||||| ||||    
T  7714341 agtctcacaagtgtttatgacattatataagctcaaataagtcaatccaaacatgccc 7714398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 10488562 - 10488614
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||| ||||||||| |||| ||||||||||||||||  ||||||||||    
T  10488562 agtctcacatgtgtttatgttagttgataagctcaaataagccaatccaaaca 10488614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20186438 - 20186378
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  20186438 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 20186378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20205505 - 20205445
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  20205505 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 20205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 33553343 - 33553399
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||| ||||| |  |||||||||||||||||| ||||||||||| |||||||    
T  33553343 tcacaagtgcttatgttgatagataagctcaaataagctaatccaaacaagccctta 33553399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 38602447 - 38602483
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38602447 agtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 43043770 - 43043822
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||||| |||||| ||| |||||||||||| |||| |||||||||||||    
T  43043770 ctcacaagtgcttatgccagttgataagctcaaacaagtcaatccaaacaggc 43043822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 43393743 - 43393687
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||| |||||||| ||| |||||||||||| |||||||| |||||||| |||||    
T  43393743 agtctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaataggcc 43393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 16825497 - 16825454
Alignment:
Q  21 tgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||| ||||||||| || ||||||||||||||||    
T  16825497 tgctagtagataagttcaaataagctagtccaaacaggccctta 16825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 30251404 - 30251365
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  30251404 agtagataagctcaaataagccaatccaaacaggccctta 30251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 37461261 - 37461300
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  37461261 agtagataagttcaaataagttaatccaaacaggctctta 37461300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 42215263 - 42215216
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||| |||||| |||| ||||||||||||||||||||| ||||||||    
T  42215263 aagtgcttatgccagtaaataagctcaaataagttaatctaaacaggc 42215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 6526221 - 6526167
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||| | |||||| |||||||| |||| ||||||| ||||||||||||||    
T  6526221 tctcacaagggcttatgccagtagataggctcgaataagtcaatccaaacaggcc 6526167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7648121 - 7648063
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||| ||||||||| ||  ||||||||||||||||| || |||||| ||||||    
T  7648121 agtctcacaaatgtttatgccagcggataagctcaaataagtcaacccaaaccggccct 7648063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 9130276 - 9130238
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9130276 ttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 25872394 - 25872340
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||||| ||||||||| |||||| |||| | ||| ||||||||||||||    
T  25872394 tctcacaagtgtgtatgctagttgataagttcaagttagtcaatccaaacaggcc 25872340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29592171 - 29592129
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    ||||||||||| |||||||||||  ||||||||||||||||||    
T  29592171 aatagtctcacgagtgtttatgcctgtagataagctcaaataa 29592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1889106 - 1889065
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    ||||||| |||||||||||| ||||||||| |||||||||||    
T  1889106 agtctcaaaagtgtttatgccagtagataaactcaaataagt 1889065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 6950423 - 6950468
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatcc 51  Q
    |||||||| ||||||||| ||||||||| ||||||||||| |||||    
T  6950423 tctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 10062104 - 10062059
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||| ||| |||||||||||||||||||||  |||||||||||    
T  10062104 aagtgttgatgttagtagataagctcaaataagccaatccaaacag 10062059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24326130 - 24326167
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaat 41  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  24326130 agtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 38874817 - 38874862
Alignment:
Q  17 tttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||    
T  38874817 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 38874862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 43045682 - 43045641
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||||||||||| |||||||  |||||||||||||    
T  43045682 ttatgctagtagataagcttaaataagccaatccaaacaggc 43045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1561378 - 1561426
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||||||| | |||||||| |||||||| | ||||||||    
T  1561378 tctcacaagtgtttatgccattagataagatcaaataaatcaatccaaa 1561426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 2487979 - 2487919
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||| |||||  ||||||| | ||||||||||  |||||||||| |||||||    
T  2487979 agtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatgccctta 2487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 2606152 - 2606208
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||| |||| |||||  ||||||||||||| ||||||| |||||||||| |||||||    
T  2606152 tcactagtgattatgtcagtagataagctcgaataagtcaatccaaacaagccctta 2606208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 4560604 - 4560652
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||||| |||||  | ||||||||||||||||||| |||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10437983 - 10438039
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||| |||||| | | |||||| |||||||||| |||||||||| ||||    
T  10437983 gtctcacaagtgattatgccattggataagttcaaataagtcaatccaaacatgccc 10438039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 29699381 - 29699425
Alignment:
Q  15 tgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||| || ||| |||||||||||||| |||||||||||||    
T  29699381 tgtttatgccagcagagaagctcaaataagtcaatccaaacaggc 29699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 30191112 - 30191052
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| ||||||| |||||| | ||||||| |||||||||| | || ||||||||||||||    
T  30191112 agtctaacaagtgcttatgccaatagataaactcaaataagcttatgcaaacaggccctta 30191052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 34770971 - 34771019
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||| ||||||||| |||||| ||||||||||| || |||||||    
T  34770971 tcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaaca 34771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 39049373 - 39049405
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctca 38  Q
    |||||||| ||||||||||||||||||||||||    
T  39049373 tctcacaaatgtttatgctagtagataagctca 39049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 39881690 - 39881646
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    |||||||||||||||||| | |||||||| |||||||||| ||||    
T  39881690 tctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51929837 - 51929897
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  51929837 aatagcctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaacaggccc 51929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 44014769 - 44014712
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  44014769 agtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 44014712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 40240785 - 40240738
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  40240785 caagtgtttatgctagtatataagctcaaataagttaatccaaacagg 40240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21872266 - 21872214
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  21872266 agtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 25459599 - 25459543
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||| |||||||||| ||||||||||||||| | ||||||||||| ||||    
T  25459599 tctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacagaccct 25459543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 50211834 - 50211886
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  50211834 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 11041423 - 11041376
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  11041423 caagtgtttatgctagcagataagctcaattaagtcaatccaaacagg 11041376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 24684779 - 24684741
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  24684779 ttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 584159 - 584196
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||||||||||||||||||||||| |||||||||    
T  584159 ttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11253600 - 11253653
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||| |||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  11253600 agtctctcaagtgcttatgctagtagataatctcaaataagtcaattcaaacag 11253653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49845514 - 49845457
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||| ||| |||| ||||| |||||| |||||||||||||||| ||||||||||||    
T  49845514 aatagtttcataagtttttatactagtatataagctcaaataagtcaatccaaacagg 49845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 31512486 - 31512534
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||| |||||||||| |||||||||| |||| ||||||||||    
T  31512486 tcacaagtgttcatgctagtaggtaagctcaaacaagtcaatccaaaca 31512534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 36189728 - 36189780
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| |||| |||||| |||||||||||||||| ||| ||||||    
T  36189728 agtctcacaagtgcttatactagtaaataagctcaaataagtcaattcaaaca 36189780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 41644409 - 41644369
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataagttaatcc 51  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  41644409 caagtgcttatgctagtagataagctcaaagaagttaatcc 41644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 45541670 - 45541730
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| |||||||||||| | | || |||||||||||||||| ||||||||||||| ||||    
T  45541670 agtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggctctta 45541730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 45590750 - 45590802
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| ||| ||||||    
T  45590750 agtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaaca 45590802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 53891862 - 53891806
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||||||||||| | |||||  ||||| || |||||||||    
T  53891862 tcacaagtgtttatgctagtagataagctgatataagccaatccgaataggccctta 53891806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2304245 - 2304202
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    |||||| |||||||||||||||||||||||| || |||||||||    
T  2304245 aatagtttcacaagtgtttatgctagtagatcagttcaaataag 2304202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 3622364 - 3622415
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||| |||| |||||||||||||| ||||||||  ||||||||||||    
T  3622364 tcacaagtgcttatactagtagataagcttaaataagtcgatccaaacaggc 3622415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22055651 - 22055705
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||| ||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  22055651 aatagtcccacaagtgtgtgtgccagtagataagctcaaataag-taatccaaaca 22055705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 23326154 - 23326123
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataa 43  Q
    ||||||||||||||||||||||||||||||||    
T  23326154 aagtgtttatgctagtagataagctcaaataa 23326123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44295623 - 44295678
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| ||||||||| ||||||| ||||||||||||||| |||| |||| |||||    
T  44295623 aatagtatcacaagtgcttatgcttgtagataagctcaaacaagtcaatctaaaca 44295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 48807798 - 48807837
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  48807798 agtctcacaagtgtttatgctagtaaataagcttaaataa 48807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 2100150 - 2100092
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||||||  |||   |||||||||||||||||| ||||||||||| ||||    
T  2100150 agtctcacaagtgttttagctgaaagataagctcaaataagtcaatccaaacagaccct 2100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 27795980 - 27795938
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  27795980 tcacaagtgcttatgccagtagataagctcaaataagctaatc 27795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34958389 - 34958451
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||| ||||||||||||| |  | ||||| | |||||| ||||||||||||||||||||||    
T  34958389 aatagtgtcacaagtgtttaggtcaatagatcatctcaaacaagttaatccaaacaggccctt 34958451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 41057254 - 41057312
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||| ||||||  |||||||||||||||||||  ||| |||| |||||||    
T  41057254 agtctcacaagtgcttatgcatgtagataagctcaaataagccaattcaaataggccct 41057312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 5407402 - 5407365
Alignment:
Q  27 tagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  5407402 tagataagctcaaataagctaatgcaaacaggccctta 5407365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32663734 - 32663795
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||||||| | ||   |||||||||||||||||||  ||||||||||| ||||    
T  32663734 aatagtctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaacagaccct 32663795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 39769640 - 39769681
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaat 49  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  39769640 tcacgagtgtttatgcgagtagataagttcaaataagttaat 39769681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 49465906 - 49465869
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    |||||||||||||||||||| | |||||||||||||||    
T  49465906 tctcacaagtgtttatgctaatggataagctcaaataa 49465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 49916564 - 49916613
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||  |||||||||||||| |||||||| | ||||||||||    
T  49916564 ctcacaagtgttcgtgctagtagataagttcaaataaatcaatccaaaca 49916613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 53762352 - 53762307
Alignment:
Q  17 tttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||||||||||   ||||||| ||||||||    
T  53762352 tttatgctagtagataagctcaaataaaccaatccaagcaggccct 53762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 1820079 - 1820043
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||||||  ||||||||||||||||||    
T  1820079 agataagctcaaataagccaatccaaacaggccctta 1820043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 15304316 - 15304280
Alignment:
Q  27 tagataagctcaaataagttaatccaaacaggccctt 63  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  15304316 tagataagctcaaataagtcaattcaaacaggccctt 15304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 20210899 - 20210847
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| |||||  ||||||||| ||||||||| | ||||||||||    
T  20210899 agtctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaaca 20210847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22667502 - 22667542
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  22667502 agtctcacaagtgcttatgtcagtagataagctcaaataag 22667542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22724141 - 22724181
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  22724141 agtctcacaagtgcttatgtcagtagataagctcaaataag 22724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37138378 - 37138434
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||||||||||  |||||||||  || ||||||  |||||||||||    
T  37138378 aatagtctcacaagtgtttatgtcagtagataaattctaataagccaatccaaacag 37138434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39980842 - 39980886
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||||||||||||| |||  ||||||||||| ||||    
T  39980842 ttatgctagtagataagctcaaacaagccaatccaaacagaccct 39980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 41848681 - 41848641
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  41848681 acaagtgtttatgttagtagataaactcaaataagtcaatc 41848641  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 50760694 - 50760742
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||| |||||    
T  50760694 tcacaagtgcttatgcttgtagatgagctcaaataagtcaatctaaaca 50760742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 52440628 - 52440584
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatcca 52  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||    
T  52440628 tcacaagtgcttatgctagtagataggttcaaataagtttatcca 52440584  T

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Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52013983 - 52014039
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  52013983 aatagtctcacacgtgtttatgccaatagataagctcaaataagttaatccaaacag 52014039  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10199382 - 10199319
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  10199382 aatagtgtcacaagtgcttatgttagtagataagctcaaataagtcaatccaaccaggccctta 10199319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6659776 - 6659830
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  6659776 aatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaac 6659830  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 33723353 - 33723299
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  33723353 agtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacagg 33723299  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15558310 - 15558368
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||||||| || ||| ||||||||||||||| | ||||||||||||||||    
T  15558310 agtctcacaagtgtttaagccagtcgataagctcaaataactcaatccaaacaggccct 15558368  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 2832075 - 2832120
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaa 53  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2832075 tcacaagtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29793672 - 29793619
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  29793672 aatagtctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9602628 - 9602568
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||||||| ||| | ||||||||||||||| |||||| |||||||| ||||||    
T  9602628 aatagtctcacaagtgcttaagttagtagataagctcagataagtcaatccaaataggccc 9602568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 14128442 - 14128382
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||| |||||||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  14128442 agtctcacaaatgtttatgctagtagataagttcacataatctaatccaaacaagccctta 14128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 32515412 - 32515356
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||| ||||| |||||||||| |||||||| | |||||||||||||||    
T  32515412 agtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 43420357 - 43420417
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||| ||||| ||||||    
T  43420357 agtctcacaagtgtttatgtctgtagataagctcaaataagctaatcctaacagaccctta 43420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 1565115 - 1565064
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||| || ||||||||||||| |||||| ||||||||||||||||    
T  1565115 tctcacaagtgcttgtgctagtagataatctcaaaaaagttaatccaaacag 1565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 21002254 - 21002313
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    ||||||||||||  |||||| ||||||||||||||||||||  |||||||||| ||||||    
T  21002254 agtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaacaagccctt 21002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 24460372 - 24460314
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||| | |||  |||||||||| |||||||||| ||||||||||||||||    
T  24460372 agtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaacaggccct 24460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4276624 - 4276563
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||| |||| || |||||| || |||||||||||||||||| |||||||||| |||||    
T  4276624 aatagtctaacaaatgcttatgccagaagataagctcaaataagtaaatccaaacatgccct 4276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26866409 - 26866470
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||| |||| ||| || ||||||||||||| |||||||| ||||||||||| ||||    
T  26866409 aatagtctcagaagtatttgtgttagtagataagctgaaataagtcaatccaaacagaccct 26866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2522696 - 2522744
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 53  Q
    |||| |||||||||||||| ||||||||| ||||||||||| |||||||    
T  2522696 gtcttacaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 3319917 - 3319865
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||| || || || ||||||||||||||||||||||||| ||||||||||    
T  3319917 agtctcataattgcttttgctagtagataagctcaaataagtcaatccaaaca 3319865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 11893562 - 11893514
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||| ||| |||||||||||||| |||||||||| ||||||||    
T  11893562 tctcacaagtatttgtgctagtagataagttcaaataagtcaatccaaa 11893514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 15515657 - 15515701
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  15515657 tctcacacgtgtttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 24279848 - 24279888
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  24279848 agtctcacaagtgtttatgctagtaaataagttcaaataag 24279888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 49282686 - 49282635
Alignment:
Q  2 atagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||||||||||| ||||||| || |||||||||| |||||||||    
T  49282686 atagtctcacaagtgtttatgttagtagacaa-ctcaaataagctaatccaaa 49282635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 2295311 - 2295350
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  2295311 agtagataagctcaaataagccaatccaaacaggccctta 2295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 7218043 - 7217988
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||| ||||||||||||  ||||||||||| |||||||| |||||||||| ||||    
T  7218043 tctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaacatgccc 7217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28467529 - 28467584
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||| ||||| | ||||||||| |||| ||||||||||| ||||||||||    
T  28467529 aatagtctcataagtgctaatgctagtaaataaactcaaataagtcaatccaaaca 28467584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 42550298 - 42550345
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||||||||||| |||||||| ||||| ||||| |||||||||    
T  42550298 tcacaagtgtttatgctggtagataacctcaactaagtcaatccaaac 42550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6292593 - 6292643
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||| ||||| |||||  ||||||||||||||||||||| ||||||||||    
T  6292593 tctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 15477666 - 15477712
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||||    
T  15477666 ttatgcaagtagataagctctaataagccaatccaaacaggccctta 15477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 24313645 - 24313595
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||| ||||||||||||| ||||||||  | ||||||||||    
T  24313645 tctcacaagtgtttgtgctagtagataaactcaaatagataaatccaaaca 24313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 30014035 - 30013997
Alignment:
Q  19 tatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  30014035 tatgctagtagataaactcaaataagtcaatccaaacag 30013997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 32859918 - 32859868
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||  |||||||||||||||||||||| ||||| ||| ||||    
T  32859918 agtctcacaagtacttatgctagtagataagctcaagtaagtcaattcaaa 32859868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 32958739 - 32958789
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||| |||||  ||||||||||||||||||||| |||| ||||||    
T  32958739 ctcacaagtgcttatgacagtagataagctcaaataagtcaatctaaacag 32958789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 35017683 - 35017721
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataag 35017721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 37431858 - 37431888
Alignment:
Q  27 tagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||||||||||||||||||||||    
T  37431858 tagataagctcaaataagttaatccaaacag 37431888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 40304036 - 40303994
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||| ||||||||| || |||||||||||||||||||||||    
T  40304036 ttatgccagtagataatctgaaataagttaatccaaacaggcc 40303994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 42575427 - 42575389
Alignment:
Q  17 tttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  42575427 tttatgctagtagataagctcaaataaggcaatccaaac 42575389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 4757438 - 4757487
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||||||||  | ||||||||||||||||||| || |||||    
T  4757438 gtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 6231785 - 6231748
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  6231785 tctcacaaatgtttatgctagtagataacctcaaataa 6231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 29723592 - 29723637
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaa 53  Q
    ||||||||| ||||||||||| |||||||||||| ||| |||||||    
T  29723592 tcacaagtgcttatgctagtaaataagctcaaattagtcaatccaa 29723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29793853 - 29793914
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||| ||||||| ||| ||||  |||||||||| ||| ||||||| ||||    
T  29793853 aatagtctcacaagtgcttatgctggtaaataaattcaaataagtcaattcaaacagaccct 29793914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 33975676 - 33975725
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||| || || |||||||||||||||||||||| || |||||||    
T  33975676 ctcacaagtgcttgtgttagtagataagctcaaataagtgaacccaaaca 33975725  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 37593655 - 37593614
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    ||||| |||||||||||||| |||| ||||||||||||||||    
T  37593655 agtctaacaagtgtttatgccagtatataagctcaaataagt 37593614  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 50644211 - 50644174
Alignment:
Q  19 tatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  50644211 tatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 4033986 - 4033934
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||||||||| |||||| ||| |||||| ||| ||| ||||||||    
T  4033986 tctcacaagtgtttatgccagtagacaagttcaaatgagtcaatgcaaacagg 4033934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9507330 - 9507370
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  9507330 agtctcacaaatgcctatgctagtagataagctcaaataag 9507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 17269351 - 17269407
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||    || ||||||| |||||||||| ||||||||||||||||    
T  17269351 tctcacaagtgtttaaataagaagataagttcaaataagtcaatccaaacaggccct 17269407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25944537 - 25944581
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    ||||||||||||||||||||||  |||| |||||| |||||||||    
T  25944537 aatagtctcacaagtgtttatgtcagtaaataagcgcaaataagt 25944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 29045888 - 29045852
Alignment:
Q  20 atgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  29045888 atgctagtagataaactcaaataagtcaatccaaaca 29045852  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 31517711 - 31517671
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||| |||||| |||| |||||||||||||||    
T  31517711 agtctcacaagtgcttatgccagtaaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 36523233 - 36523201
Alignment:
Q  30 ataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||| |||||||||||||||||||||||||    
T  36523233 ataagcttaaataagttaatccaaacaggccct 36523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 37241789 - 37241738
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||| |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  37241789 tctcgcaagtgcttatgc-agtagataagcttaaataagtcaatccaaacagg 37241738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 529458 - 529521
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||    
T  529458 aatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaatcagaccctta 529521  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17988997 - 17988945
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||| |||||| |||||||||||||||||||||||||||||||| ||||||    
T  17988997 caagtgattatgcgagtagataagctcaaataagttaatccaaacaagccctt 17988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23214954 - 23215006
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  23214954 agtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaaca 23215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 40598456 - 40598404
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  40598456 agtctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8094402 - 8094445
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  8094402 aatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 25596145 - 25596191
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||    
T  25596145 ttatgctggtagataagctcaaataagtcagtccaaacaggccctta 25596191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 1418521 - 1418570
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| ||||| |||||| ||||||||||||||||||||| ||||||||||    
T  1418521 ctcataagtgcttatgccagtagataagctcaaataagtcaatccaaaca 1418570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29363607 - 29363660
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||| ||||| ||||||||||| |||||||||  |||||||||||    
T  29363607 agtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaacag 29363660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 8427112 - 8427168
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||  ||||| |||||||||||||||||||| | |||||||| |||||    
T  8427112 agtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaataggcc 8427168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 31341242 - 31341286
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||    
T  31341242 aagtgtttatgcaagtagaaaagctcaaataagtcaatccaaaca 31341286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 33894726 - 33894786
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||| |||||  | | |||||||||||||||| ||||||||||| |||||||    
T  33894726 agtctcacaagtgcttatgtcatttgataagctcaaataagctaatccaaacatgccctta 33894786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 40252080 - 40252036
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||    
T  40252080 ttatgctagtagataagctcaaataagccaattcaaacaggccct 40252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44290017 - 44289957
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  44290017 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 44289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 5276594 - 5276641
Alignment:
Q  9 cacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  5276594 cacaagtgtttatgttagtagataagctcatctaagtcaatccaaaca 5276641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 37064418 - 37064367
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtg 76  Q
    |||||||||| |||||||||| ||||||||||| |||||| | |||||||||    
T  37064418 agtagataagatcaaataagtcaatccaaacagacccttaattaagcatgtg 37064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 46091691 - 46091742
Alignment:
Q  3 tagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||| || |||| ||| ||||| ||||||||||||||||||||||    
T  46091691 tagtctcacaaatgcttatactattagatgagctcaaataagttaatccaaa 46091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 3019885 - 3019935
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||  |||| ||||||||||||||||||||||| |||| ||||||    
T  3019885 ctcacaagtacttatactagtagataagctcaaataagtcaatcaaaacag 3019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 7513663 - 7513709
Alignment:
Q  9 cacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||| |||||| ||||||||||||||||||||| ||| |||||    
T  7513663 cacaagtgcttatgccagtagataagctcaaataagtcaattcaaac 7513709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12234860 - 12234802
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||| ||| | |||| ||||||||||||||| ||||| |||||||| |||||||    
T  12234860 agtctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaataggccct 12234802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17942170 - 17942232
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 66  Q
    ||||||||| ||||||||   |||||||||||||||| |||| | |||||||||||| |||||    
T  17942170 agtctcacaggtgtttattgcagtagataagctcaaacaagtcattccaaacaggccattact 17942232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 28727710 - 28727672
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggcccttact 66  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  28727710 agataagctcaaataagttaatccaaataggctcttact 28727672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32791719 - 32791665
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||||| |||| ||||||||||||||||||||  |||||  |||||||||    
T  32791719 aatagtctcactagtgcttatgctagtagataagctctgataagccaatccaaac 32791665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25659842 - 25659805
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  25659842 ttatgttagtagataatctcaaataagttaatccaaac 25659805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 28691807 - 28691754
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||| || ||||| ||| |||||| ||||||||||| |||||||||||    
T  28691807 agtctcacaaatgcttatgttagcagataaactcaaataagtcaatccaaacag 28691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 29269474 - 29269511
Alignment:
Q  13 agtgtttatgctagtagataagctcaaataagttaatc 50  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  29269474 agtgtttatgttagtacataagctcaaataagttaatc 29269511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 39542270 - 39542221
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||| |||||| |||||||||||||||| ||||||||||| || |||||    
T  39542270 gtctcgcaagtgcttatgctagtagataaactcaaataagtcaacccaaa 39542221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 46281110 - 46281061
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| ||||||||||| ||||||||||| |||||||||  ||||||||||    
T  46281110 ctcaaaagtgtttatgttagtagataagttcaaataagccaatccaaaca 46281061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 47046071 - 47046026
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaacag 47046026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 4970739 - 4970707
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||||||||||| ||||||||||||||    
T  4970739 agataagctcaaataagtcaatccaaacaggcc 4970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 24363569 - 24363517
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    ||||| ||||| |||||||||||||||| |||||||||   ||||||||||||    
T  24363569 tctcataagtgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 28128369 - 28128316
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| ||||||| ||||| |  |||||||||| ||||||||||||||||    
T  28128369 tctcacaagtgcttatgctcgtagaca--ctcaaataagctaatccaaacaggccc 28128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29287322 - 29287378
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||| |||||||||  || ||||||| ||||||| ||| |||||||||||    
T  29287322 aatagtctcacgagtgtttatattactagataaactcaaattagtcaatccaaacag 29287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 30134252 - 30134284
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||||||||||||| |||||||    
T  30134252 agtagataagctcaaataagttaattcaaacag 30134284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30751618 - 30751670
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| |||||||| |||||  |||||||||| | |||||||||||||||||||    
T  30751618 agtcgcacaagtgcttatgtcagtagataagtttaaataagttaatccaaaca 30751670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 34083565 - 34083521
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||| ||||||| ||||||||||||| |||||||||| |||||    
T  34083565 ttatgcaagtagatgagctcaaataagtcaatccaaacatgccct 34083521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36517690 - 36517734
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||||    
T  36517690 ttatgccagtagctaagctcaaataaatgaatccaaacaggccct 36517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 40371601 - 40371565
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||||||||| |||||||||| |||||||    
T  40371601 agataagctcaaataagtcaatccaaacatgccctta 40371565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 40734787 - 40734731
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||| |||||  |||||||||||||||| |||||  || ||||||||||||    
T  40734787 tctcacaagtatttatattagtagataagctcaagtaagtcgatgcaaacaggccct 40734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 47042010 - 47041958
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||||| |||  | |||||| |||||||||||| ||||||||||    
T  47042010 agtctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaaca 47041958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 12111066 - 12111129
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactc 67  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  12111066 agtctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaataggcccatactc 12111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4325279 - 4325218
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||||| |||||||||| || |||| ||| ||||||||||||||||    
T  4325279 aatagtctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaacaggccct 4325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 2460122 - 2460067
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  2460122 agtctcacaagtacttatgctagtttataagctcaaataagttaatccaaacaggc 2460067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6742907 - 6742951
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  6742907 aatagtctcacaagtgattatgctagtaggtaagctcaaataagt 6742951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10016719 - 10016775
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||||||||||||||  ||||||||||||||||||   |||||||||||    
T  10016719 aatagtctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaacag 10016775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3738200 - 3738247
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatcc 51  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  3738200 agtctcacaagtgcttatgctagtagataaactcaaataagtcaatcc 3738247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 32205970 - 32205928
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  32205970 ttatgctagtagataaggtcaaataagtcaatccaaacaggcc 32205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 8010457 - 8010514
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||| ||||||||| | |||||||||||| |||||| ||||||||||| ||||    
T  8010457 gtctcacaaatgtttatgccaatagataagctcacataagtcaatccaaacagaccct 8010514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 34531507 - 34531552
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  34531507 aagtgtttatgctaggagataagctcaaatcagtcaatccaaacag 34531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 34403954 - 34404006
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  34403954 agtctaacaagtgtttatgctagtttattagctgaaataagttaatccaaaca 34404006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 34429678 - 34429646
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataa 43  Q
    |||||||||||||||||||||||||||||||||    
T  34429678 caagtgtttatgctagtagataagctcaaataa 34429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35070438 - 35070386
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| |||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  35070438 agtcccacaagtgcttatgttagtagataagctcaaataagaaaatccaaaca 35070386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 835218 - 835179
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  835218 ttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 32861645 - 32861696
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||| ||||    
T  32861645 tcacaagtgcttattctagtagataagctcaaataagcaaatccaaaaaggc 32861696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 316780 - 316750
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctca 38  Q
    |||||||||||||||||||||||||||||||    
T  316780 tcacaagtgtttatgctagtagataagctca 316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 7148767 - 7148817
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||| |||||| | ||||||||||||||||||| || |||||||    
T  7148767 tctcacaagtgcttatgcgactagataagctcaaataagtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 9202941 - 9202903
Alignment:
Q  19 tatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  9202941 tatgccagtagataagctcaaataagtcaatccaaacag 9202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 26559210 - 26559160
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||| || |||||| ||||| ||| ||||||||||||||||||||    
T  26559210 agtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 33737831 - 33737881
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||| |||||||||||| |||||||||| ||||||||||| ||||| ||||    
T  33737831 tctctcaagtgtttatggtagtagataaactcaaataagtcaatcctaaca 33737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 103543 - 103584
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||| || |||||||||||||||| |||||||||||||    
T  103543 ttatgctaatatataagctcaaataagtcaatccaaacaggc 103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 738510 - 738461
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||| |||||||   | |||||||||||||||||||||||||||||    
T  738510 tctcacaaatgtttatctcaatagataagctcaaataagttaatccaaac 738461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 2727850 - 2727801
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||||||| | |||||||||||||| |||  |||||||||||    
T  2727850 tcacaagtgtttatgcgattagataagctcaaacaagccaatccaaacag 2727801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 8420168 - 8420115
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaat-aagttaatccaaaca 56  Q
    |||||||||||||||||||  | ||||||||||||||| |||| ||||||||||    
T  8420168 agtctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 30863345 - 30863402
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||| |||||||||||||| | || ||| |||||||||||| | |||||||||||||    
T  30863345 agtctaacaagtgtttatgccaataaataggctcaaataagtcactccaaacaggccc 30863402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31327580 - 31327527
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||| ||||||||||||| ||||||| ||||||| |||||||| ||| ||||    
T  31327580 aatagtttcacaagtgtttaggctagtaaataagcttaaataagtcaattcaaa 31327527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 31338090 - 31338123
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatcc 51  Q
    |||||||||||||||||||||||||||| |||||    
T  31338090 ttatgctagtagataagctcaaataagtcaatcc 31338123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 32917296 - 32917337
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||||| ||||||| ||||||| |||||||    
T  32917296 agtctcacaagtgtttattctagtaggtaagctctaataagt 32917337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 848102 - 848145
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  848102 ttatgcta-tagataagctcaaataaggcaatccaaacaggccct 848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3217086 - 3217042
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||| || ||| ||||||||| |||||||||||||||||||||    
T  3217086 aatagtttcgcaaatgtttatgcaagtagataagctcaaataagt 3217042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 7485103 - 7485051
Alignment:
Q  11 caagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    ||||||||||| | ||||||||||| |||| ||||  ||||||||||||||||    
T  7485103 caagtgtttataccagtagataagcacaaacaagtatatccaaacaggccctt 7485051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7901802 - 7901750
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||| | ||||| || || |||| ||||||||||||||||||||||    
T  7901802 agtctcacaagggcttatgatactatataaactcaaataagttaatccaaaca 7901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 9109061 - 9109025
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  9109061 agataaactcaagtaagttaatccaaacaggccctta 9109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 13908343 - 13908391
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||  |||||||||| |||||||||| ||| ||||||    
T  13908343 tcacaagtgtttatgtcagtagataagttcaaataagtcaattcaaaca 13908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 21959800 - 21959855
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||| ||||| ||| || |||| ||||| |||||||||||||||||||||||||    
T  21959800 agtctcagaagtgctta-gcaagtatataagttcaaataagttaatccaaacaggcc 21959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 29052890 - 29052850
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||| |||||||||||||| || |||||||||    
T  29052890 agtctcacaagtgcttatgctagtagattagttcaaataag 29052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 30536915 - 30536879
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  30536915 agtagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 31776239 - 31776191
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||||||    
T  31776239 tcacaagtgtatatatcagtagataagctcaaataagtcaatccaaaca 31776191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9174912 - 9174975
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||| || |||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  9174912 aatagtctcacgagcgtttatgctaatagataagctcaaataagtcaatccaaacatgccctta 9174975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31723901 - 31723954
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  31723901 aatagtctcataagtgtttatgctagtacataagctcaaataagtcaatccaaa 31723954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 40335844 - 40335788
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||    
T  40335844 agtctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggcc 40335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8651326 - 8651263
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||| |||||| |||||||||||||| |||||||||||||||||  |||||||||| |||||||    
T  8651326 aatactctcacgagtgtttatgctagaagataagctcaaataaggcaatccaaacatgccctta 8651263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 11153416 - 11153357
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  11153416 gtctcgcaagtgtttatgctagtagataagctcaaacaagccaatccaaacagcccctta 11153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 7705955 - 7705909
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7705955 ttatgctagtagatatgctcaaataagtcaatccaaacaggccctta 7705909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 25705628 - 25705575
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||    
T  25705628 tctcacaagtgcttatgttagtagataagttcaaataatttaatccaaacaggc 25705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 14599337 - 14599285
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||||||||||| ||||| |||||||| | ||||||||||||||||    
T  14599337 acaagtgtttatgctagtaaataagttcaaataactgaatccaaacaggccct 14599285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 26004962 - 26004914
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  26004962 acaagtgcttatgctagtagataagctaaaataagtcaatccaaacagg 26004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 36796678 - 36796626
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||    
T  36796678 agtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaaca 36796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 6938695 - 6938648
Alignment:
Q  13 agtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  6938695 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 6938648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 41277333 - 41277274
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||||||||| |||||| ||||| ||||| |||||||| | |||||||||||||||||    
T  41277333 agtctcacaagtatttatggtagtacataagttcaaataaataaatccaaacaggccctt 41277274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 25720388 - 25720334
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    ||||||||||||| |||||| ||||||||| |||||||||| |||| ||||||||    
T  25720388 agtctcacaagtgcttatgccagtagataacctcaaataagctaattcaaacagg 25720334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 444021 - 444062
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  444021 agtctcacaagtgtttatgcaattagataagctcaaataagt 444062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 13508541 - 13508590
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    |||||||||||||||||| |||||||||| |||||||||| || ||||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaac 13508590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 34198524 - 34198573
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  34198524 tcacaagtgtttatgttagtaaataaactcaaataagtcaatccaaacag 34198573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35135626 - 35135569
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||| ||||||||| |||||  |||||| ||||| |||||||||||||||||||||    
T  35135626 aatagtatcacaagtggttatgtcagtagagaagctgaaataagttaatccaaacagg 35135569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 35299887 - 35299924
Alignment:
Q  27 tagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  35299887 tagataagctcaaataagtcaatccaaacaggccctta 35299924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 10771857 - 10771809
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||| |||||| ||||||||||||||||||||  ||||||||    
T  10771857 tctcacaagtgcttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11615619 - 11615575
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaa 11615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14706253 - 14706205
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  14706253 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16937840 - 16937800
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  16937840 ttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11105001 - 11105056
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| ||||||||| ||||||| || ||||||||||||||| | ||||||||||    
T  11105001 aatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaaaca 11105056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 14331486 - 14331525
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  14331486 agtagataagctcaaataagtcaatccaaacagaccctta 14331525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 17368775 - 17368826
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||| |||||| |||||||||| | |||||||| |||||||||||||    
T  17368775 tcacaagtgcttatgccagtagataagtttaaataagtcaatccaaacaggc 17368826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 41112865 - 41112830
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataa 43  Q
    |||||||||||||||| |||||||||||||||||||    
T  41112865 tcacaagtgtttatgcaagtagataagctcaaataa 41112830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 2092458 - 2092508
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  |||||||    
T  2092458 agtcccacaagtatttatgctagtagataaactcaaataagtcgatccaaa 2092508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 8820873 - 8820911
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  8820873 ttatgctagtagataagatcaaataagtaaatccaaaca 8820911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 17369306 - 17369356
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    ||||||||| |||||  |||||||||| |||||||||| ||||||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaacagg 17369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 1899252 - 1899293
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||  |||||||||||||| ||||||||||||||||    
T  1899252 agtctcacatatgtttatgctagtaaataagctcaaataagt 1899293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 5946524 - 5946487
Alignment:
Q  15 tgtttatgctagtagataagctcaaataagttaatcca 52  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  5946524 tgtttatgctagtagataagttcaaataagtcaatcca 5946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 6717221 - 6717266
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  6717221 aagtgtttatgctagcagataagcttaaataagtcaattcaaacag 6717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 11297167 - 11297114
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||| |||||||||||||| | |||||||||| |||||||| ||| |||||||    
T  11297167 agtcttacaagtgtttatgccactagataagcttaaataagtcaattcaaacag 11297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11457197 - 11457238
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||| ||| | |||||||||||||||||||    
T  11457197 agtctcacaagtgtttctgccaatagataagctcaaataagt 11457238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 32172754 - 32172791
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  32172754 tctcacaagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 39594928 - 39594965
Alignment:
Q  26 gtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  39594928 gtagataagctcaaataagtcaatccaaacaagccctt 39594965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 6715901 - 6715869
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||| |||||||||||||||||||    
T  6715901 agtagataagctcgaataagttaatccaaacag 6715869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 10391443 - 10391499
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||| |||||| || ||||||||| |||||||  |||| |||||||||||    
T  10391443 tctcacaagtgattatgccagcagataagcttaaataagccaatcgaaacaggccct 10391499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10638509 - 10638453
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||| ||||||| ||||| | |||||||| || |||||||| |||||||||||    
T  10638509 aatagtcttacaagtgcttatgttggtagataatcttaaataagtcaatccaaacag 10638453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 10640073 - 10640109
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  10640073 agtagataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 10798393 - 10798341
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||  ||| |||||||||||||| |||||| | ||||||||||||    
T  10798393 tctcacaagtgcatatactagtagataagctaaaataaatcaatccaaacagg 10798341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 18897681 - 18897633
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||| ||||||||||||||||| |||||||  | ||||||||||||||    
T  18897681 aagtgcttatgctagtagataagttcaaatacttcaatccaaacaggcc 18897633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 21782624 - 21782576
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||||||||||| |||||||||  |||||||||| || ||||||    
T  21782624 ctcacaagtgtttatgccagtagataatttcaaataagtcaagccaaac 21782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 34117519 - 34117479
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||| |||||||||||||| ||||||||||||| ||||||    
T  34117519 agtctaacaagtgtttatgccagtagataagctccaataag 34117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38028632 - 38028692
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||| |||| || || | |||||||||||||||||||||   |||||||||||||    
T  38028632 aatagtctcataagttttcataccagtagataagctcaaataagtcggtccaaacaggccc 38028692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39257365 - 39257325
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  39257365 agtctcacaagtgcttatgttagtagataagcttaaataag 39257325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 42034167 - 42034215
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||| |||||  ||||| |||||||||||||| |||||||||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaacaggcc 42034215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 56186872 - 56186817
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  56186872 aatagtctcacaagtgtttatgttagtagataaactcgaataagttaatccaaaca 56186817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 18512487 - 18512433
Alignment:
Q  3 tagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  18512487 tagtctcacaagtgtttatgtcagtagataagctcaaataagttaatcgaaacag 18512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 21953375 - 21953430
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  21953375 ctcacaagtgattatgctactagataagctcaaataagtcaatccaaacagaccct 21953430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 27123323 - 27123268
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  27123323 agtctcacaagtacttatgctagtttataagctcaaataagttaatccaaacaggc 27123268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 28615435 - 28615486
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  28615435 tctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaacag 28615486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 32421029 - 32420979
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  32421029 agtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaa 32420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 24193634 - 24193683
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  24193634 ctcacaagtgtttatgccaggagataagctcaaataagtcaatccaaaca 24193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 46187880 - 46187828
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  46187880 agtctcataagtgtttatgccagtagataagctcaaataagatcatccaaaca 46187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 17822815 - 17822780
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||||||||||||||||||||||||||    
T  17822815 agtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 3637341 - 3637299
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  3637341 aagtgtttatgctaatagataagctcaaataagtcaatccaaa 3637299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7368025 - 7367967
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||| ||||||||  |||||||| ||||||||||| ||||||||||| ||||    
T  7368025 agtctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaacagaccct 7367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 18815136 - 18815182
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  18815136 ttatgctagtaggtaagctcaaataagccaatccaaacaggccctta 18815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 25896883 - 25896933
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||||| | |||||||||||||| ||||||||||| ||||||||    
T  25896883 agtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 25896933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 39691106 - 39691064
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  39691106 ttatgctagtagataagctcaaataagtcaattcaaacaggcc 39691064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 47399584 - 47399642
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||| ||||||| |||| ||||| |||||||||||||| ||||||| ||||    
T  47399584 agtctcacaagtttttatgccagtatataagttcaaataagttaattcaaacagaccct 47399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 1017127 - 1017176
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 53  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  1017127 agtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23319965 - 23320010
Alignment:
Q  19 tatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  23319965 tatgctagtagataatctcaaataagccaatccaaacaggccctta 23320010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50746071 - 50746124
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||| ||| ||||    
T  50746071 aatagtctcacaagtgcttatgcaagtagataaactcaaataagtcaatacaaa 50746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 1075561 - 1075597
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataag 44  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1075561 tcacaagtgtttatgccagtagataagctcaaataag 1075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17975311 - 17975255
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||| | |||||||||| || | |||||||||||||||||||| |||||||||||    
T  17975311 aatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaacag 17975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 22662213 - 22662165
Alignment:
Q  13 agtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||    
T  22662213 agtgcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 22666692 - 22666644
Alignment:
Q  13 agtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||    
T  22666692 agtgcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35571588 - 35571544
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||    
T  35571588 ttatgctagtagataagctcaaataagccaatccaaacagaccct 35571544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 55870313 - 55870261
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||| ||||||||  | ||||||| ||||||||||||||||||||||    
T  55870313 agtctcacaaatgtttatgtcattagataaactcaaataagttaatccaaaca 55870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 2977947 - 2977896
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 55  Q
    ||||||||| ||| |||||| | ||||| |||||||||||||||||||||||    
T  2977947 agtctcacacgtgcttatgccactagatcagctcaaataagttaatccaaac 2977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 27043780 - 27043741
Alignment:
Q  25 agtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  27043780 agtagataagctcaaataagtcaatccaaacagaccctta 27043741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 42403969 - 42403934
Alignment:
Q  29 gataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42403969 gataagctcaaataagtcaatccaaacaggccctta 42403934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 47146042 - 47146101
Alignment:
Q  3 tagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||| |||||| | || ||||| |||||||||| |||||||| |||||||    
T  47146042 tagtctcacaagtgcttatgccaatatataagttcaaataagtcaatccaaataggccct 47146101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 18628524 - 18628486
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaata 42  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  18628524 agtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19429441 - 19429391
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||||||| | |||| |||||||||||||||  ||||||||    
T  19429441 agtctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11264400 - 11264453
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||  ||||||||||||||||||  ||||||||||  |||||||||||    
T  11264400 agtctcacagatgtttatgctagtagatagactcaaataagccaatccaaacag 11264453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 30338586 - 30338545
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||||| | |||||||||||||||| ||||    
T  30338586 agtctcacaagtgtttatcccagtagataagctcaaaaaagt 30338545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 32421198 - 32421251
Alignment:
Q  3 tagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||  ||||||||||  ||| |||||||||||| ||||||||||    
T  32421198 tagtctcacaagtccttatgctagtgaatatgctcaaataagtcaatccaaaca 32421251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 41512769 - 41512798
Alignment:
Q  35 ctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||||||||||||||    
T  41512769 ctcaaataagttaatccaaacaggccctta 41512798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52333694 - 52333755
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||| ||| |  |||| |||||||||||||||  |||| |||||||||||    
T  52333694 aatagtctcacaagtgcttaggtcagtaaataagctcaaataagccaatcgaaacaggccct 52333755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 54426156 - 54426197
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||| ||||||||||||||||||||  |||||||||||||    
T  54426156 ttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 22772445 - 22772389
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||| ||||||||||||||||||||||    |||| ||| ||||||||||||||||    
T  22772445 tctcaaaagtgtttatgctagtagataaaactaaatgagtcaatccaaacaggccct 22772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22796754 - 22796806
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||| || || |||||||||||||||| ||||||||| | ||||||||||    
T  22796754 agtctcataaatgcttatgctagtagataaactcaaataaatcaatccaaaca 22796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 25487522 - 25487482
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    ||||||| |||||||| ||||||| ||||||||||||||||    
T  25487522 acaagtgcttatgctaatagataaactcaaataagttaatc 25487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 29126226 - 29126174
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| ||||||  |||||||||||||||||||  |||||||||| |||||||    
T  29126226 aagtgcttatgccggtagataagctcaaataagccaatccaaacaagccctta 29126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 32769500 - 32769536
Alignment:
Q  26 gtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  32769500 gtagataagctaaaataagtcaatccaaacaggccct 32769536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 37575895 - 37575855
Alignment:
Q  16 gtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  37575895 gtttatgctagcagataaactcaaataagtcaatccaaaca 37575855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 44638182 - 44638138
Alignment:
Q  19 tatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||||    
T  44638182 tatgctagtaaataaactcaaataagtcaatccaaacatgccctt 44638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 55414370 - 55414326
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||| ||||||||  ||||||||||| ||||||||||||||||    
T  55414370 ttatgccagtagatactctcaaataagtcaatccaaacaggccct 55414326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 28810420 - 28810363
Alignment:
Q  7 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||||||||||||||||    
T  28810420 ctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaacaggccctta 28810363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41170706 - 41170763
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 58  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||    
T  41170706 aatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaacagg 41170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 9996837 - 9996897
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||  |||||||||| ||||||||||||||||| || |||||||||||||||    
T  9996837 agtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaacaggccctta 9996897  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 15370294 - 15370238
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  15370294 agtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 15120286 - 15120335
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  15120286 tcacaactgtttatgctagtagataagttcaaataagtcaatccaaacag 15120335  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 2964778 - 2964722
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  2964778 tctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 2964722  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 13866977 - 13867029
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||||||  |||||||||||||||||| || ||||||||||    
T  13866977 agtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaaca 13867029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 33931537 - 33931481
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  33931537 tcacaagtgcttatgctattaggtaagctcaaataagttaatccagacagaccctta 33931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 449960 - 450003
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  449960 ttatgctagtagataagctcaaataagttaatgcaaacatgccc 450003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 10563527 - 10563472
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 63  Q
    |||||| || ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  10563527 tcacaattgcttatgctggtagataagttcaaataagtcaatccaaacaggccctt 10563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 35329787 - 35329737
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  35329787 tctcactagtgtttatggtagtagataagctcacataagtcaatccaaaca 35329737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 43259938 - 43259996
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 66  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||||||||  ||||||||    
T  43259938 tcacaagtgcttatgctagtagataagttcaaataagccaatccaaacaatcccttact 43259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 6547988 - 6548041
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||||||||||  |||||||||||||||||||  ||||||| |||||||||||    
T  6547988 agtctcacaagttcttatgctagtagataagcttgaataagtcaatccaaacag 6548041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 2790337 - 2790397
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||| ||||||  |||| |||||||||||| |||||||||  ||||||||||||||||||    
T  2790337 agtctgacaagtacttatactagtagataagttcaaataagccaatccaaacaggccctta 2790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3078582 - 3078526
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||| | |||||||||| || | |||||||||||||||||||| |||||||||||    
T  3078582 aatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaacag 3078526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 11513995 - 11514047
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| |||||||||||||||| |||||||||   ||||||||||    
T  11513995 agtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22878197 - 22878249
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    ||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||    
T  22878197 agtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 28803501 - 28803445
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||| ||| ||||||  |||||||||||||||||||| |||||||| |||||    
T  28803501 agtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 33981222 - 33981270
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatcca 52  Q
    ||||||||||||| ||| |||||||| |||||||||||||| |||||||    
T  33981222 agtctcacaagtgcttaagctagtaggtaagctcaaataagctaatcca 33981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 35713286 - 35713338
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||||||| ||||||| ||||||||||| | ||| ||||||    
T  35713286 agtctcacaagtgtttatgcaagtagattagctcaaataaatcaatacaaaca 35713338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36677748 - 36677804
Alignment:
Q  1 aatagtctcacaagtgtttatg-ctagtagataagctcaaataagttaatccaaaca 56  Q
    |||||||||||||||| ||||| | | ||||||| ||||||||||||||||||||||    
T  36677748 aatagtctcacaagtgcttatgtcaaatagataaactcaaataagttaatccaaaca 36677804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 39567945 - 39567981
Alignment:
Q  8 tcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39567945 tcacaagtgtttatgctggtagataagctcaaataag 39567981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 40759259 - 40759315
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||| |||||  | ||||||||||||||||||  ||||||||||||||    
T  40759259 agtctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 12313142 - 12313087
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    ||||||||||| |||||||||| | |||| ||||||||| |||| |||||||||||    
T  12313142 tctcacaagtgcttatgctagtgggtaagatcaaataagctaatacaaacaggccc 12313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 14302921 - 14302960
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  14302921 agtctcacaaatgtttatgctaatagataagctcaaataa 14302960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 18179062 - 18179101
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  18179062 ttatgttagtagataagctcaaataagtcaatccaaacag 18179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 26202151 - 26202185
Alignment:
Q  28 agataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||| |||||||||||||||||||||||||||    
T  26202151 agataagttcaaataagttaatccaaacaggccct 26202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29430854 - 29430896
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataa 43  Q
    ||||||| ||||||||||||||  |||||||||||||||||||    
T  29430854 aatagtcccacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 1830143 - 1830196
Alignment:
Q  9 cacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||| |||||  |||| |||| ||||||||||| ||||||||||||||||    
T  1830143 cacaagtgcttatgtcagtaaataaactcaaataagtcaatccaaacaggccct 1830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 5043517 - 5043476
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||||||||||||| |||||||||| |||||||| ||||    
T  5043517 ttatgctagtagataaggtcaaataagtcaatccaaaaaggc 5043476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 7928246 - 7928209
Alignment:
Q  27 tagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  7928246 tagataagctcaaataagccaatccaaacaggccctta 7928209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 24097916 - 24097961
Alignment:
Q  12 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||||||||| | |||||| |||||||||||| |||||||||||||    
T  24097916 aagtgtttatccaagtagacaagctcaaataaattaatccaaacag 24097961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 27317500 - 27317533
Alignment:
Q  26 gtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||||||||||||||| |||||||||||||    
T  27317500 gtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 33503111 - 33503152
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||||||||||||||||||||||  ||| |||||||||    
T  33503111 ttatgctagtagataagctcaaataagccaatacaaacaggc 33503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35809963 - 35810012
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    ||||||||||||| || ||||||  |||||||||||||||||||| ||||    
T  35809963 aatagtctcacaactgcttatgccggtagataagctcaaataagtcaatc 35810012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 37448734 - 37448693
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    ||||||| |||||||||||||||||||| |||| ||||||||    
T  37448734 ttatgctggtagataagctcaaataagtcaatctaaacaggc 37448693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 43569808 - 43569861
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 59  Q
    |||||||| ||||||||| ||| ||||| ||||||||||| ||| |||||||||    
T  43569808 tctcacaaatgtttatgccagtggataacctcaaataagtcaattcaaacaggc 43569861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 757548 - 757608
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||| |||| |||||||||||| ||||||||||||| |  || ||||||| |||||||    
T  757548 agtctcataagtatttatgctagtaaataagctcaaatatgccaacccaaacaagccctta 757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 1633457 - 1633421
Alignment:
Q  18 ttatgctagtagataagctcaaataagttaatccaaa 54  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  1633457 ttatgctagtagataaactcaaataagtaaatccaaa 1633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 4607046 - 4607082
Alignment:
Q  26 gtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||  ||||||||||||||||    
T  4607046 gtagataagctcaaataagccaatccaaacaggccct 4607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 6772482 - 6772446
Alignment:
Q  26 gtagataagctcaaataagttaatccaaacaggccct 62  Q
    |||||||||||||||||||| |||||||||| |||||    
T  6772482 gtagataagctcaaataagtcaatccaaacatgccct 6772446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 14666648 - 14666688
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  14666648 gtctcacaagtgtttatggaagtaaataagctcaaataagt 14666688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25609895 - 25609935
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataag 44  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  25609895 agtctcacaagttcttatgttagtagataagctcaaataag 25609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30990401 - 30990357
Alignment:
Q  13 agtgtttatgctagtagataagctcaaataagttaatccaaacag 57  Q
    |||| ||||| |||||||||||||||||||||  |||||||||||    
T  30990401 agtgcttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 31739951 - 31739919
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctca 38  Q
    ||||||||||||||||| |||||||||||||||    
T  31739951 tctcacaagtgtttatgttagtagataagctca 31739919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 35378497 - 35378445
Alignment:
Q  10 acaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 62  Q
    ||||||| |||||||| || |||||||||||||||  |||||||||| |||||    
T  35378497 acaagtgcttatgctattatataagctcaaataagccaatccaaacatgccct 35378445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 35810774 - 35810726
Alignment:
Q  6 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 54  Q
    ||||||||||| |||||||||||||||||||  |||||| | |||||||    
T  35810774 tctcacaagtgcttatgctagtagataagctggaataagctgatccaaa 35810726  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 37276843 - 37276899
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    ||||||||||||| ||||  |||||||||| || ||||||||  |||||||||||||    
T  37276843 agtctcacaagtgcttatattagtagataaacttaaataagtcgatccaaacaggcc 37276899  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 38767553 - 38767493
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 64  Q
    ||||||||||||| |||||| |||||||||||||  |||||  |||| ||||||| |||||    
T  38767553 agtctcacaagtgcttatgccagtagataagctcgtataagccaatctaaacagggcctta 38767493  T

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Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 159947 - 159887
Alignment:
Q  1 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 61  Q
    |||||| ||||||||||||||  |||||||||||||||||||||  |||||||||||||||    
T  159947 aatagtttcacaagtgtttatattagtagataagctcaaataagccaatccaaacaggccc 159887  T

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Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6909 - 6950
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagt 45  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  6909 agtctcacaagtgtttatgctagtagataaactcaaataagt 6950  T

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Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 12686 - 12641
Alignment:
Q  5 gtctcacaagtgtttatgctagtagataagctcaaataagttaatc 50  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||||    
T  12686 gtctcacaagtgcttatgctagtggataagttcaaataagtcaatc 12641  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 9749 - 9693
Alignment:
Q  4 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 60  Q
    |||||||||||| |||||| |||||||||| ||||||||| | |||| ||| |||||    
T  9749 agtctcacaagtatttatgttagtagataaactcaaataaatcaatctaaataggcc 9693  T

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