View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5069-Insertion-2 (Length: 502)
Name: NF5069-Insertion-2
Description: NF5069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5069-Insertion-2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 7 - 502
Target Start/End: Complemental strand, 35252415 - 35251929
Alignment:
| Q |
7 |
atattcaacttattaaacacataaattgagttacttcatgaattggcgagaactccaccatggcagaccccaacgttcgaacctccaaaattaccgcatg |
106 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35252415 |
atattcaatttattaaacacataaattgagttacttcatgaattggcgagaactccaccatggcagaccccaacgttcgaacctccaaaattaccgcatg |
35252316 |
T |
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| Q |
107 |
ttaaaactctaagctggcggacaacatcaaaataatgccgctccatatgctcttatgaaatggacaatgctccaatgcattattcttagatgctttttgt |
206 |
Q |
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| T |
35252315 |
ttaaaactctaagctggcggacaacatcaaaataatgccgctccatatgctcttatgaaatggacaatgctccaatgcattattcttagatgctttttgt |
35252216 |
T |
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| Q |
207 |
gttttcttagac-----nnnnnnnnnnnngttttttgtgttcttcttaacttaaaatacacttgagtgtataaactcttgtataattgtgaatttggaga |
301 |
Q |
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| T |
35252215 |
gctttcttagacaaaaaaaaaaaaaaaatgttttttgtgttcttcttaacttaaaatacgcttgagtgtataaactcttgtataattgtgaatttggaga |
35252116 |
T |
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| Q |
302 |
aaaatacttnnnnnnnnncacttcagtttgtcgtgtaaaactaaaaaatggtctagaaatgatttaaacttccctacatttgcacagtacaaattgatca |
401 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35252115 |
aaaa--------------cacttcagtttgtcgtgtaaaactaaaaaatggtctagaaatgatttaaacttccctacatttgcacagtacaaattgatca |
35252030 |
T |
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| Q |
402 |
tttcactgtgccactaaacaattcatgcaaactttagtgataaaaaagatcagccagtctctgccactacctgagattcttttcattttcatacgatggt |
501 |
Q |
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| T |
35252029 |
tttcactgtgccactaaacaattcatgcaaactttagtgataaaaaagatcagccagtctctgccactacctgagattattttcattttcatacgatggt |
35251930 |
T |
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