View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5070-Insertion-6 (Length: 317)
Name: NF5070-Insertion-6
Description: NF5070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5070-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 98 - 317
Target Start/End: Complemental strand, 34369655 - 34369436
Alignment:
| Q |
98 |
attacccatccctgattttgttgttcttgttcctattgccccttcgacctcccgtggagatacttattgatatcgtggagtccacaatccacaattttag |
197 |
Q |
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| T |
34369655 |
attacccatccctgattttgttgttcttgtacctattgccccttcgatctcccgtggagatacttactgaaatcgtggagtccacaatccacaattttag |
34369556 |
T |
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| Q |
198 |
gactaatagaatagaaagaggatagtgcgtgagctgtgactattctttgataccacaaatcaaagtttcgtctcaactctaaaaacataatctcctccca |
297 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
34369555 |
gactaatagaatagaaaaaggatagtgcgtgagctgtgactattctttgataccacaaatcaaagtttcgtctcaactctaaaaacatattctcctccca |
34369456 |
T |
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| Q |
298 |
aaatttctctgtggtctgaa |
317 |
Q |
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|||||||||||||||||||| |
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| T |
34369455 |
aaatttctctgtggtctgaa |
34369436 |
T |
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