View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5070-Insertion-9 (Length: 122)

Name: NF5070-Insertion-9
Description: NF5070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5070-Insertion-9
NF5070-Insertion-9
[»] chr6 (14 HSPs)
chr6 (45-118)||(659161-659234)
chr6 (49-89)||(2395609-2395649)
chr6 (45-89)||(32643776-32643820)
chr6 (45-89)||(2959029-2959073)
chr6 (57-89)||(4083623-4083655)
chr6 (45-89)||(8329606-8329650)
chr6 (45-89)||(8448190-8448234)
chr6 (45-89)||(8456994-8457038)
chr6 (45-89)||(8939662-8939706)
chr6 (52-80)||(11152562-11152590)
chr6 (49-89)||(29183694-29183734)
chr6 (45-89)||(34830814-34830858)
chr6 (45-80)||(5603495-5603530)
chr6 (45-80)||(34539337-34539372)
[»] scaffold0244 (1 HSPs)
scaffold0244 (45-89)||(7805-7849)
[»] chr8 (20 HSPs)
chr8 (45-89)||(37817412-37817456)
chr8 (45-89)||(403702-403746)
chr8 (45-89)||(6845031-6845075)
chr8 (45-89)||(10096648-10096692)
chr8 (45-89)||(27928194-27928238)
chr8 (45-89)||(34711603-34711647)
chr8 (45-89)||(36586518-36586562)
chr8 (46-89)||(21530816-21530859)
chr8 (45-94)||(20662553-20662602)
chr8 (45-89)||(9569760-9569804)
chr8 (45-89)||(19649546-19649590)
chr8 (45-89)||(24242633-24242677)
chr8 (45-89)||(25063376-25063420)
chr8 (45-89)||(25250821-25250865)
chr8 (45-89)||(27817497-27817541)
chr8 (45-89)||(37295162-37295206)
chr8 (45-89)||(40999789-40999833)
chr8 (45-89)||(44604869-44604913)
chr8 (45-80)||(23681055-23681090)
chr8 (45-80)||(36055514-36055549)
[»] chr7 (25 HSPs)
chr7 (45-89)||(5523829-5523873)
chr7 (45-89)||(46274984-46275028)
chr7 (45-89)||(10061064-10061108)
chr7 (45-89)||(10422514-10422558)
chr7 (57-89)||(26794948-26794980)
chr7 (45-94)||(17895665-17895714)
chr7 (45-89)||(1573889-1573933)
chr7 (45-89)||(2228128-2228172)
chr7 (45-89)||(4069164-4069208)
chr7 (45-89)||(4106590-4106634)
chr7 (45-89)||(4227370-4227414)
chr7 (45-89)||(5508721-5508765)
chr7 (45-89)||(8946464-8946508)
chr7 (52-80)||(10084354-10084382)
chr7 (45-89)||(19258460-19258504)
chr7 (45-89)||(21226101-21226145)
chr7 (45-81)||(32251383-32251419)
chr7 (45-89)||(35849331-35849375)
chr7 (54-94)||(37117902-37117942)
chr7 (45-89)||(40656156-40656200)
chr7 (45-89)||(40857388-40857432)
chr7 (45-89)||(45041781-45041825)
chr7 (45-89)||(45236966-45237010)
chr7 (45-89)||(47584719-47584763)
chr7 (46-89)||(48612553-48612596)
[»] chr4 (22 HSPs)
chr4 (45-89)||(3084290-3084334)
chr4 (45-89)||(5880334-5880378)
chr4 (45-80)||(12694568-12694603)
chr4 (41-89)||(4379343-4379391)
chr4 (45-89)||(7413128-7413172)
chr4 (45-89)||(7459208-7459252)
chr4 (45-89)||(38814619-38814663)
chr4 (46-89)||(52772152-52772195)
chr4 (45-94)||(13389051-13389100)
chr4 (45-86)||(31263549-31263590)
chr4 (45-89)||(2942483-2942527)
chr4 (45-89)||(7512803-7512847)
chr4 (45-89)||(12821201-12821245)
chr4 (45-89)||(24712124-24712168)
chr4 (57-89)||(28983768-28983800)
chr4 (53-89)||(32104066-32104102)
chr4 (45-89)||(34660839-34660883)
chr4 (45-89)||(35828310-35828354)
chr4 (49-89)||(37050737-37050777)
chr4 (45-89)||(47462084-47462128)
chr4 (45-89)||(51281502-51281546)
chr4 (46-89)||(24407533-24407576)
[»] chr2 (12 HSPs)
chr2 (52-89)||(40592349-40592386)
chr2 (45-89)||(42133490-42133534)
chr2 (45-89)||(12236157-12236201)
chr2 (45-89)||(13268023-13268067)
chr2 (45-89)||(35476538-35476582)
chr2 (45-89)||(37644281-37644325)
chr2 (45-89)||(39070055-39070099)
chr2 (48-80)||(41197008-41197040)
chr2 (45-89)||(42007263-42007307)
chr2 (45-89)||(43461382-43461426)
chr2 (45-89)||(45049421-45049465)
chr2 (46-89)||(40812053-40812096)
[»] chr5 (27 HSPs)
chr5 (45-89)||(5203587-5203631)
chr5 (45-89)||(9054019-9054063)
chr5 (45-89)||(671107-671151)
chr5 (45-89)||(1287351-1287395)
chr5 (45-89)||(1833367-1833411)
chr5 (45-89)||(4617814-4617858)
chr5 (45-89)||(6053099-6053143)
chr5 (45-89)||(6672277-6672321)
chr5 (45-89)||(9068839-9068883)
chr5 (45-89)||(10165568-10165612)
chr5 (45-89)||(16496636-16496680)
chr5 (45-89)||(17869172-17869216)
chr5 (45-89)||(18473950-18473994)
chr5 (45-89)||(23074692-23074736)
chr5 (45-89)||(23311221-23311265)
chr5 (45-89)||(34856617-34856661)
chr5 (45-89)||(34930261-34930305)
chr5 (45-89)||(36246042-36246086)
chr5 (45-89)||(36259833-36259877)
chr5 (45-89)||(36569315-36569359)
chr5 (45-89)||(36854206-36854250)
chr5 (45-89)||(37940954-37940998)
chr5 (45-89)||(39150974-39151018)
chr5 (45-89)||(40318833-40318877)
chr5 (45-89)||(42448247-42448291)
chr5 (45-80)||(14107297-14107332)
chr5 (54-89)||(40044973-40045008)
[»] chr3 (20 HSPs)
chr3 (45-89)||(30553016-30553060)
chr3 (46-89)||(28731883-28731926)
chr3 (45-94)||(10473962-10474011)
chr3 (45-94)||(43605624-43605673)
chr3 (45-89)||(3440762-3440806)
chr3 (45-89)||(4232225-4232269)
chr3 (45-89)||(4976756-4976800)
chr3 (45-89)||(8381115-8381159)
chr3 (45-89)||(13525205-13525249)
chr3 (45-89)||(15003664-15003708)
chr3 (45-89)||(24650595-24650639)
chr3 (45-89)||(29212113-29212157)
chr3 (45-89)||(32591008-32591052)
chr3 (45-89)||(33886418-33886462)
chr3 (45-89)||(35069349-35069393)
chr3 (45-89)||(40840205-40840249)
chr3 (57-89)||(41464700-41464732)
chr3 (45-89)||(47069043-47069087)
chr3 (46-89)||(4833158-4833201)
chr3 (46-89)||(46894849-46894892)
[»] chr1 (20 HSPs)
chr1 (45-89)||(5790094-5790138)
chr1 (45-89)||(13018109-13018153)
chr1 (45-89)||(21522353-21522397)
chr1 (45-89)||(39606441-39606485)
chr1 (45-89)||(40958622-40958666)
chr1 (45-89)||(270369-270413)
chr1 (57-89)||(1576410-1576442)
chr1 (45-89)||(2208943-2208987)
chr1 (45-89)||(10635525-10635569)
chr1 (45-89)||(15331110-15331154)
chr1 (41-73)||(17540120-17540152)
chr1 (45-89)||(19338226-19338270)
chr1 (45-89)||(20164121-20164165)
chr1 (45-89)||(23225338-23225382)
chr1 (45-89)||(29005126-29005170)
chr1 (57-89)||(29510711-29510743)
chr1 (45-89)||(40685565-40685609)
chr1 (45-89)||(42631033-42631077)
chr1 (45-89)||(47429640-47429684)
chr1 (46-89)||(43676073-43676116)
[»] scaffold0595 (1 HSPs)
scaffold0595 (45-89)||(381-425)
[»] scaffold0402 (1 HSPs)
scaffold0402 (45-89)||(1289-1333)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-89)||(39361-39405)


Alignment Details
Target: chr6 (Bit Score: 54; Significance: 2e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 659234 - 659161
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttcactaaatacagagcaatactaatac 118  Q
    |||||| |||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  659234 gaggtaccggggtttgaaccccggtcatgacatccgatctaacaagttcactaaatacggagcaatactaatac 659161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 2395609 - 2395649
Alignment:
Q  49 tatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  2395609 tatcaggattcgaaccccggtcatggcatccgacctaacaa 2395649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 32643776 - 32643820
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  32643776 gaggtaccgggattcgaaccccggtcatggcatccggcctaacaa 32643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 2959073 - 2959029
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  2959073 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 2959029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 4083655 - 4083623
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||| |||||||    
T  4083655 ttcgaaccccggtcatggcatccgacctaacaa 4083623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 8329606 - 8329650
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  8329606 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 8329650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 8448190 - 8448234
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  8448190 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 8448234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 8456994 - 8457038
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  8456994 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 8457038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8939706 - 8939662
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  8939706 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 8939662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 80
Target Start/End: Complemental strand, 11152590 - 11152562
Alignment:
Q  52 cgggattcgaaccccggtcatggcatccg 80  Q
    |||||||||||||||||||||||||||||    
T  11152590 cgggattcgaaccccggtcatggcatccg 11152562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 29183734 - 29183694
Alignment:
Q  49 tatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||| ||||||||||||||||||||||||  |||||||    
T  29183734 tatcggggttcgaaccccggtcatggcatccggcctaacaa 29183694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 34830858 - 34830814
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||    
T  34830858 gaggtaccgggcttcgaactccggtcatggcatccgacctaacaa 34830814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 5603495 - 5603530
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||||| || ||||||||||||||||||||||||    
T  5603495 gaggtatcagggttcgaaccccggtcatggcatccg 5603530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 34539372 - 34539337
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||| |||| ||||||||||||||||||||||||    
T  34539372 gaggtaccgggtttcgaaccccggtcatggcatccg 34539337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7805 - 7849
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||    
T  7805 gaggtatcggggttcgaaccccggtcatgacatccgatctaacaa 7849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000003; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 37817456 - 37817412
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||    
T  37817456 gaggtatcggggttcgaaccccggtcatggcatccgacctaacaa 37817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 403746 - 403702
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||    
T  403746 gaggtaccggggttcgaaccccggtcatggcatccgacctaacaa 403702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 6845031 - 6845075
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  6845031 gaggtaccgggattcgaaccccggtcatggcatccggcctaacaa 6845075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 10096692 - 10096648
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||    
T  10096692 gaggtatcggggttcgaaccccggtcatggcatccggcctaacaa 10096648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 27928238 - 27928194
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||    
T  27928238 gaggtaccggggttcgaaccccggtcatggcatccggtctaacaa 27928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 34711603 - 34711647
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||    
T  34711603 gaggtaccggggttcgaaccccggtcatggcatccgacctaacaa 34711647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 36586562 - 36586518
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||    
T  36586562 gaggtaccggggttcgaaccccggtcatggcatccgacctaacaa 36586518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 21530859 - 21530816
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  21530859 aggtaccgggattcgaacctcggtcatggcatccgacctaacaa 21530816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 20662602 - 20662553
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||| ||| |||||||||||||||||||||||||  ||||||| ||||    
T  20662602 gaggtaccggcattcgaaccccggtcatggcatccggcctaacaatttca 20662553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 9569804 - 9569760
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  9569804 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 9569760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 19649546 - 19649590
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  19649546 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 19649590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 24242633 - 24242677
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  24242633 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 24242677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 25063420 - 25063376
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  25063420 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 25063376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 25250865 - 25250821
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  25250865 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 25250821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 27817497 - 27817541
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| |||||| ||||||||    
T  27817497 gaggtaccggggttcgaaccccggtcatgacatccggtctaacaa 27817541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 37295206 - 37295162
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  37295206 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 37295162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 40999833 - 40999789
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| |||||| |||||||||||||||||  |||||||    
T  40999833 gaggtatcggggttcgaatcccggtcatggcatccggcctaacaa 40999789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 44604869 - 44604913
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||    
T  44604869 gaggtaccggggttcgaaccccgatcatggcatccgacctaacaa 44604913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 23681090 - 23681055
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||| |||| ||||||||||||||||||||||||    
T  23681090 gaggtaccggggttcgaaccccggtcatggcatccg 23681055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 36055549 - 36055514
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||| |||| ||||||||||||||||||||||||    
T  36055549 gaggtaccggggttcgaaccccggtcatggcatccg 36055514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 5523873 - 5523829
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  5523873 gaggtatcaggattcgaaccccggtcatggcatccgacctaacaa 5523829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 46275028 - 46274984
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  46275028 gaggtaccgggattcgaaccccggtcatggcatccgacctaacaa 46274984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 10061064 - 10061108
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  10061064 gaggtaccgggattcgaaccccggtcatggcatccggcctaacaa 10061108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 10422558 - 10422514
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||    
T  10422558 gaggtaccgggattcgaaccccgatcatggcatccgacctaacaa 10422514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 26794980 - 26794948
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||||||||||||||||||||||||    
T  26794980 ttcgaaccccggtcatggcatccgatctaacaa 26794948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 17895714 - 17895665
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||| ||||    
T  17895714 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttca 17895665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 1573889 - 1573933
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  1573889 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 1573933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 2228128 - 2228172
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||| ||||||  |||||||    
T  2228128 gaggtaccgggattcgaaccccggtcatgacatccggcctaacaa 2228172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 4069164 - 4069208
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  4069164 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4069208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 4106634 - 4106590
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  4106634 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4106590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 4227414 - 4227370
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||    
T  4227414 gaggtaccggggttcgaaccccgatcatggcatccgacctaacaa 4227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 5508765 - 5508721
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  5508765 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 5508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8946508 - 8946464
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  8946508 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 8946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 80
Target Start/End: Original strand, 10084354 - 10084382
Alignment:
Q  52 cgggattcgaaccccggtcatggcatccg 80  Q
    |||||||||||||||||||||||||||||    
T  10084354 cgggattcgaaccccggtcatggcatccg 10084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 19258504 - 19258460
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  19258504 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 19258460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 21226145 - 21226101
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  21226145 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 21226101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 32251383 - 32251419
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccga 81  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  32251383 gaggtatcggggttcgaaccccggtcatgacatccga 32251419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 35849375 - 35849331
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  35849375 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 35849331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 37117902 - 37117942
Alignment:
Q  54 ggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||||||||||| ||||||||||||| ||||||| ||||    
T  37117902 ggattcgaaccccgatcatggcatccgacctaacaatttca 37117942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 40656156 - 40656200
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  40656156 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 40656200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 40857388 - 40857432
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||    
T  40857388 gaggtaccggggttcgaaccccgatcatggcatccgacctaacaa 40857432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 45041781 - 45041825
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||| ||||||||| |||||||    
T  45041781 gaggtaccggggttcgaaccccggtcaaggcatccgacctaacaa 45041825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 45237010 - 45236966
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||| ||||||  |||||||    
T  45237010 gaggtatcggggttcgaaccccggtcatgacatccggcctaacaa 45236966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 47584719 - 47584763
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  47584719 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 47584763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 48612596 - 48612553
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||| ||||||||||||||||||||||||  |||||||    
T  48612596 aggtaccggggttcgaaccccggtcatggcatccggcctaacaa 48612553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 3084290 - 3084334
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  3084290 gaggtatcgggattcgaaccccgatcatggcatccgacctaacaa 3084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 5880334 - 5880378
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||    
T  5880334 gaggtatcggggttcgaaccccggtcatggcatccggtctaacaa 5880378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 12694603 - 12694568
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    ||||||||||||||||||||||||||||||||||||    
T  12694603 gaggtatcgggattcgaaccccggtcatggcatccg 12694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 4379391 - 4379343
Alignment:
Q  41 agttgaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||| ||||||||||||||||  |||||||    
T  4379391 agttgatgtatcgggattcgaactccggtcatggcatccggcctaacaa 4379343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 7413172 - 7413128
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||    
T  7413172 gaggtaccgggattcgaaccccggttatggcatccggtctaacaa 7413128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 7459252 - 7459208
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||    
T  7459252 gaggtaccgggattcgaaccccggttatggcatccggtctaacaa 7459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 38814663 - 38814619
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||    
T  38814663 gaggtatcggggttcgaaccccggtcatggcatccaacctaacaa 38814619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 52772195 - 52772152
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||    
T  52772195 aggtatcgggattcgaaccccgatcaaggcatccgacctaacaa 52772152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 13389100 - 13389051
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||| |||| ||||||||||||||||| ||||||| ||||||| ||||    
T  13389100 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaatttca 13389051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 31263549 - 31263590
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaa 86  Q
    |||||| |||| |||||||||||||||||||||||| |||||    
T  31263549 gaggtaccggggttcgaaccccggtcatggcatccggtctaa 31263590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 2942483 - 2942527
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| |||||| |||| ||||||||||||| |||||||    
T  2942483 gaggtatcggggttcgaatcccgatcatggcatccgacctaacaa 2942527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 7512847 - 7512803
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  7512847 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 7512803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 12821245 - 12821201
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  12821245 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 12821201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 24712168 - 24712124
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  24712168 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 24712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 28983800 - 28983768
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||| |||||||    
T  28983800 ttcgaaccccggtcatggcatccgacctaacaa 28983768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 32104066 - 32104102
Alignment:
Q  53 gggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||||||  |||||||    
T  32104066 gggattcgaaccccggtcatggcatccggcctaacaa 32104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 34660839 - 34660883
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  34660839 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 34660883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 35828354 - 35828310
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  35828354 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 35828310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 37050777 - 37050737
Alignment:
Q  49 tatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||| ||||||||||||||||||||||||  |||||||    
T  37050777 tatcggggttcgaaccccggtcatggcatccggcctaacaa 37050737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 47462084 - 47462128
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  47462084 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 47462128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 51281546 - 51281502
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||    
T  51281546 gaggtatcggggttcgaactccggtcatggcatccggcctaacaa 51281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 24407576 - 24407533
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||| |||||| |||||||||||||||||| |||||||    
T  24407576 aggtaccggggttcgaatcccggtcatggcatccgacctaacaa 24407533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 40592386 - 40592349
Alignment:
Q  52 cgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40592386 cgggattcgaaccccggtcatggcatccgacctaacaa 40592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 42133490 - 42133534
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||||||||||||  |||||||||||||| |||||||    
T  42133490 gaggtatcgggattcgaaccctagtcatggcatccgacctaacaa 42133534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 12236201 - 12236157
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  12236201 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 12236157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 13268023 - 13268067
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  13268023 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 13268067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 35476538 - 35476582
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  35476538 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 35476582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 37644281 - 37644325
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||| ||||||||||||  |||||||    
T  37644281 gaggtatcggggttcgaaccccgatcatggcatccggcctaacaa 37644325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 39070099 - 39070055
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  39070099 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 39070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 41197040 - 41197008
Alignment:
Q  48 gtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||||| ||||||||||||||||||||||||    
T  41197040 gtatcggggttcgaaccccggtcatggcatccg 41197008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 42007263 - 42007307
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  42007263 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 42007307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 43461382 - 43461426
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  43461382 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 43461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 45049465 - 45049421
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||| ||||||  |||||||    
T  45049465 gaggtaccgggattcgaaccccggtcatgacatccggcctaacaa 45049421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 40812096 - 40812053
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||| ||||||||||||||||| ||||||| |||||||    
T  40812096 aggtaccggggttcgaaccccggtcatgacatccgacctaacaa 40812053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.0000000006; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 5203631 - 5203587
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||    
T  5203631 gaggtatcggggttcgaaccccggtcatggcatccggcctaacaa 5203587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 9054019 - 9054063
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||    
T  9054019 gaggtatcggggttcgaaccccggtcatggcatccggcctaacaa 9054063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 671107 - 671151
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||| ||||| ||||||| |||||||    
T  671107 gaggtatcggggttcgaaccccgatcatgacatccgacctaacaa 671151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 1287395 - 1287351
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  1287395 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 1287351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 1833367 - 1833411
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| |||||||||||||||||| |||||  |||||||    
T  1833367 gaggtatcggggttcgaaccccggtcatggtatccggcctaacaa 1833411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 4617814 - 4617858
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  4617814 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4617858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 6053099 - 6053143
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  6053099 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 6053143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 6672321 - 6672277
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  6672321 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 6672277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 9068883 - 9068839
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||    
T  9068883 gaggtaccggggttcgaaccccgatcatggcatccgacctaacaa 9068839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 10165612 - 10165568
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||| |||||||||||| ||||||||    
T  10165612 gaggtaccggggttcgaaccccgatcatggcatccggtctaacaa 10165568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 16496680 - 16496636
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  16496680 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 16496636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 17869172 - 17869216
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  17869172 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 17869216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 18473994 - 18473950
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  18473994 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 18473950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 23074692 - 23074736
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  23074692 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 23074736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 23311221 - 23311265
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  23311221 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 23311265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 34856661 - 34856617
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  34856661 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 34856617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 34930305 - 34930261
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  34930305 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 34930261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 36246042 - 36246086
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  36246042 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 36246086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 36259877 - 36259833
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||| ||||||  |||||||    
T  36259877 gaggtaccgggattcgaaccccggtcatgacatccggcctaacaa 36259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 36569359 - 36569315
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  36569359 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 36569315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 36854206 - 36854250
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  36854206 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 36854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 37940998 - 37940954
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||| ||||||||||||  |||||||    
T  37940998 gaggtatcggggttcgaaccccgatcatggcatccggcctaacaa 37940954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 39150974 - 39151018
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  39150974 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 39151018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 40318833 - 40318877
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| |||||||||||||||||| |||||  |||||||    
T  40318833 gaggtatcggggttcgaaccccggtcatggtatccggcctaacaa 40318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 42448291 - 42448247
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  42448291 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 42448247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 14107332 - 14107297
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccg 80  Q
    |||||| |||| ||||||||||||||||||||||||    
T  14107332 gaggtaccggggttcgaaccccggtcatggcatccg 14107297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 40044973 - 40045008
Alignment:
Q  54 ggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||| ||||||||||||||| |||||||    
T  40044973 ggattcgaaccctggtcatggcatccgacctaacaa 40045008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.0000000006; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 30553016 - 30553060
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  30553016 gaggtatcggggttcgaactccggtcatggcatccggtctaacaa 30553060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 28731926 - 28731883
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||    
T  28731926 aggtaccgggattcgaaccccgatcatggcatccgacctaacaa 28731883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 10473962 - 10474011
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||| ||||    
T  10473962 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaatttca 10474011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 43605624 - 43605673
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaagttca 94  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||| ||||    
T  43605624 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaaattca 43605673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 3440806 - 3440762
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  3440806 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 3440762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 4232225 - 4232269
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  4232225 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4232269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 4976756 - 4976800
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  4976756 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4976800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8381159 - 8381115
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  8381159 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 8381115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 13525249 - 13525205
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  13525249 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 13525205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 15003708 - 15003664
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  15003708 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 15003664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 24650595 - 24650639
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  24650595 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 24650639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 29212113 - 29212157
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  29212113 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 29212157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 32591052 - 32591008
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||    
T  32591052 gaggtaccgggattcgaaccccgatcatggcatccggcctaacaa 32591008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 33886418 - 33886462
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||| ||||||| |||||||    
T  33886418 gaggtaccggggttcgaaccccggtcatgacatccgacctaacaa 33886462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 35069393 - 35069349
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  35069393 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 35069349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 40840249 - 40840205
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  40840249 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 40840205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 41464732 - 41464700
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||| |||||||    
T  41464732 ttcgaaccccggtcatggcatccgacctaacaa 41464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 47069087 - 47069043
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  47069087 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 47069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 4833158 - 4833201
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||| ||||||||||||||||||||||||  |||||||    
T  4833158 aggtaccggggttcgaaccccggtcatggcatccggcctaacaa 4833201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 46894892 - 46894849
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||| |||||||| |||||||||||||||  |||||||    
T  46894892 aggtatcggggttcgaacctcggtcatggcatccggcctaacaa 46894849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.0000000006; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 5790138 - 5790094
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||    
T  5790138 gaggtatcgggattcgaaccccggtcatgacatccggcctaacaa 5790094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 13018153 - 13018109
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||    
T  13018153 gaggtaccggggttcgaaccccggtcatggcatccggtctaacaa 13018109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 21522397 - 21522353
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||    
T  21522397 gaggtaccggggttcgaaccccggtcatggcatccgacctaacaa 21522353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 39606485 - 39606441
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||    
T  39606485 gaggtatcggggttcgaaccccggtcatggcatccggcctaacaa 39606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 40958622 - 40958666
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  40958622 gaggtaccgggattcgaaccccggtcatggcatccggcctaacaa 40958666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 270369 - 270413
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  270369 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 270413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 1576442 - 1576410
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||||||||||||| |||||    
T  1576442 ttcgaaccccggtcatggcatccgatcaaacaa 1576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 2208943 - 2208987
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||||||||||||||| | | |||||| |||||||||||||||    
T  2208943 gaggtatcgggattcgaatctcagtcatgacatccgatctaacaa 2208987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 10635569 - 10635525
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  10635569 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 10635525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 15331110 - 15331154
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||    
T  15331110 gaggtaccggggttcgaacctcggtcatggcatccgacctaacaa 15331154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 17540120 - 17540152
Alignment:
Q  41 agttgaggtatcgggattcgaaccccggtcatg 73  Q
    ||||||||||||||| |||||||||||||||||    
T  17540120 agttgaggtatcggggttcgaaccccggtcatg 17540152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 19338226 - 19338270
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  19338226 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 19338270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 20164121 - 20164165
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  20164121 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 20164165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 23225338 - 23225382
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| |||||||||| |||||||||||||| |||||||    
T  23225338 gaggtaccggggttcgaacccctgtcatggcatccgacctaacaa 23225382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 29005170 - 29005126
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  29005170 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 29005126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 29510711 - 29510743
Alignment:
Q  57 ttcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||||||||| |||||||||||||||    
T  29510711 ttcgaaccccggtcatgacatccgatctaacaa 29510743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 40685609 - 40685565
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||||    
T  40685609 gaggtatcggagttcgaaccccggtcatgacatccgacctaacaa 40685565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 42631033 - 42631077
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||||||||| ||||||||||| ||||||||||||  |||||||    
T  42631033 gaggtatcggggttcgaaccccgatcatggcatccggcctaacaa 42631077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 47429640 - 47429684
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||    
T  47429640 gaggtaccgggattcgaaccccgatcatggcatccggcctaacaa 47429684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 43676073 - 43676116
Alignment:
Q  46 aggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    ||||| |||| ||||||||||||||||||||||||  |||||||    
T  43676073 aggtaccggggttcgaaccccggtcatggcatccggcctaacaa 43676116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 425 - 381
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  425 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 1289 - 1333
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  1289 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 1333  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 39361 - 39405
Alignment:
Q  45 gaggtatcgggattcgaaccccggtcatggcatccgatctaacaa 89  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||    
T  39361 gaggtaccggggttcgaaccccggtcatggcatccggcctaacaa 39405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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