View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5071-Insertion-17 (Length: 268)
Name: NF5071-Insertion-17
Description: NF5071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5071-Insertion-17 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 31556204 - 31556467
Alignment:
| Q |
8 |
gttttgcattctctttaatgacacattcgttagcacatgaattattctccaattgagtaaaactacgtctga---gtatatcgtcccatgttgataagca |
104 |
Q |
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| T |
31556204 |
gttttgcattctctttaatgacacattcgttagcacatgaattattctccaattgagtaaaactacgtctgatcagtatatcgtcccatgttgataagca |
31556303 |
T |
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| Q |
105 |
atcatcgtgaaacaagggtaccttctaaggcactaaattgatcacacggtatgcttctttgaccaaggaaccttcttcgcctgaattttgattctaaatc |
204 |
Q |
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| T |
31556304 |
atcatcgtgaaacaagggtaccttctaaggcactaaattgatcacacggtatgcttctttgaccgaggaaccttcttcgcctgaattttgattctaaatc |
31556403 |
T |
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| Q |
205 |
caaacatttttcacatgtaaccttcacttgaattttgattataaatacaaacatttttcacatt |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31556404 |
caaacatttttcacatgtaaccttcacttgaattttgattataaatacaaacatttttcacatt |
31556467 |
T |
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