View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5071-Insertion-7 (Length: 338)

Name: NF5071-Insertion-7
Description: NF5071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5071-Insertion-7
NF5071-Insertion-7
[»] chr2 (37 HSPs)
chr2 (8-338)||(10236768-10237104)
chr2 (237-338)||(3309157-3309262)
chr2 (256-325)||(3460511-3460584)
chr2 (237-325)||(3465560-3465652)
chr2 (237-338)||(14955741-14955847)
chr2 (249-338)||(12553975-12554069)
chr2 (237-276)||(26491710-26491749)
chr2 (283-338)||(34128517-34128572)
chr2 (296-338)||(18763680-18763722)
chr2 (296-338)||(27097253-27097295)
chr2 (299-338)||(4100547-4100586)
chr2 (299-338)||(4778965-4779004)
chr2 (239-274)||(12705118-12705153)
chr2 (237-324)||(14416381-14416473)
chr2 (299-338)||(31788668-31788707)
chr2 (237-274)||(3527418-3527455)
chr2 (237-274)||(4878400-4878437)
chr2 (293-338)||(10929877-10929922)
chr2 (237-274)||(11550332-11550369)
chr2 (237-274)||(13878661-13878698)
chr2 (237-274)||(14018786-14018823)
chr2 (237-274)||(15920285-15920322)
chr2 (237-274)||(16136510-16136547)
chr2 (237-274)||(18141147-18141184)
chr2 (237-274)||(20560785-20560822)
chr2 (237-274)||(25068273-25068310)
chr2 (237-274)||(29543225-29543262)
chr2 (237-274)||(33012480-33012517)
chr2 (250-336)||(33759991-33760079)
chr2 (237-274)||(35333937-35333974)
chr2 (237-274)||(36868440-36868477)
chr2 (237-274)||(40125796-40125833)
chr2 (237-274)||(43696300-43696337)
chr2 (240-276)||(5754712-5754748)
chr2 (249-338)||(6358676-6358769)
chr2 (237-276)||(32448410-32448450)
chr2 (237-276)||(37994550-37994590)
[»] chr3 (43 HSPs)
chr3 (237-338)||(21289596-21289701)
chr3 (237-338)||(16235627-16235732)
chr3 (237-338)||(51923928-51924033)
chr3 (237-336)||(27706008-27706111)
chr3 (240-338)||(8914913-8915015)
chr3 (237-338)||(7546816-7546922)
chr3 (237-338)||(42460950-42461059)
chr3 (249-334)||(53508427-53508516)
chr3 (257-338)||(27856366-27856451)
chr3 (239-334)||(51487287-51487391)
chr3 (296-338)||(31271677-31271719)
chr3 (249-338)||(41818416-41818509)
chr3 (299-338)||(6954544-6954583)
chr3 (237-274)||(33076696-33076733)
chr3 (282-338)||(24175962-24176018)
chr3 (256-338)||(38142726-38142814)
chr3 (282-338)||(48199982-48200038)
chr3 (290-338)||(51303482-51303530)
chr3 (299-338)||(44959821-44959860)
chr3 (299-338)||(52922965-52923004)
chr3 (240-274)||(7448710-7448744)
chr3 (240-274)||(7456852-7456886)
chr3 (296-338)||(48650579-48650621)
chr3 (250-313)||(52115812-52115879)
chr3 (293-338)||(628765-628810)
chr3 (237-274)||(4020009-4020046)
chr3 (237-274)||(11819516-11819553)
chr3 (237-274)||(13701662-13701699)
chr3 (237-274)||(14585894-14585931)
chr3 (237-274)||(19645622-19645659)
chr3 (237-274)||(24483356-24483393)
chr3 (237-274)||(36623923-36623960)
chr3 (237-274)||(45047929-45047966)
chr3 (237-274)||(49627764-49627801)
chr3 (293-338)||(50194177-50194222)
chr3 (293-338)||(53807700-53807745)
chr3 (237-274)||(55090359-55090396)
chr3 (237-274)||(55455294-55455331)
chr3 (237-276)||(628716-628756)
chr3 (240-272)||(20252069-20252101)
chr3 (240-276)||(32881155-32881191)
chr3 (240-272)||(35501438-35501470)
chr3 (302-338)||(46304371-46304407)
[»] chr8 (28 HSPs)
chr8 (237-338)||(42046425-42046530)
chr8 (245-338)||(14585881-14585978)
chr8 (237-338)||(18890479-18890584)
chr8 (237-338)||(41896721-41896825)
chr8 (249-338)||(43833788-43833881)
chr8 (252-338)||(8868012-8868102)
chr8 (237-276)||(39657637-39657676)
chr8 (293-338)||(24099096-24099141)
chr8 (299-338)||(7883087-7883126)
chr8 (237-276)||(8054474-8054513)
chr8 (299-338)||(8412368-8412407)
chr8 (299-338)||(16928603-16928642)
chr8 (299-338)||(30568167-30568206)
chr8 (275-338)||(41060085-41060148)
chr8 (237-274)||(2234130-2234167)
chr8 (301-338)||(3673645-3673682)
chr8 (237-274)||(5457482-5457519)
chr8 (237-274)||(6314925-6314962)
chr8 (293-338)||(7198035-7198080)
chr8 (293-338)||(21237992-21238037)
chr8 (237-274)||(24790830-24790867)
chr8 (237-274)||(31202880-31202917)
chr8 (237-274)||(31712740-31712777)
chr8 (237-274)||(37613068-37613105)
chr8 (242-274)||(14530587-14530619)
chr8 (302-338)||(31013457-31013493)
chr8 (237-276)||(40618863-40618903)
chr8 (299-335)||(41684580-41684616)
[»] chr7 (33 HSPs)
chr7 (237-338)||(35133151-35133256)
chr7 (237-338)||(48930911-48931016)
chr7 (237-338)||(28476430-28476539)
chr7 (249-332)||(25068267-25068354)
chr7 (245-338)||(25255431-25255526)
chr7 (237-336)||(11344015-11344119)
chr7 (290-337)||(22743149-22743196)
chr7 (299-338)||(39171438-39171477)
chr7 (299-338)||(8001394-8001433)
chr7 (275-338)||(26623613-26623676)
chr7 (239-274)||(31254785-31254820)
chr7 (299-338)||(34899455-34899494)
chr7 (299-338)||(40993361-40993400)
chr7 (237-335)||(24069182-24069284)
chr7 (240-274)||(25854881-25854915)
chr7 (296-338)||(45349644-45349686)
chr7 (237-274)||(2623024-2623061)
chr7 (237-274)||(4621032-4621069)
chr7 (237-274)||(6667827-6667864)
chr7 (237-274)||(8319726-8319763)
chr7 (237-274)||(21991094-21991131)
chr7 (293-338)||(24351195-24351240)
chr7 (237-274)||(26017324-26017361)
chr7 (301-338)||(29617550-29617587)
chr7 (237-274)||(34893518-34893555)
chr7 (237-274)||(37837251-37837288)
chr7 (237-274)||(38277229-38277266)
chr7 (237-274)||(39707700-39707737)
chr7 (237-274)||(43847405-43847442)
chr7 (237-274)||(44482530-44482567)
chr7 (237-274)||(48643478-48643515)
chr7 (237-273)||(9785750-9785786)
chr7 (238-274)||(37375709-37375745)
[»] chr6 (23 HSPs)
chr6 (237-338)||(8102929-8103034)
chr6 (237-338)||(30776866-30776971)
chr6 (245-338)||(14802030-14802128)
chr6 (237-338)||(546234-546335)
chr6 (237-323)||(1523621-1523711)
chr6 (251-338)||(679311-679402)
chr6 (282-338)||(6957344-6957400)
chr6 (282-338)||(26588303-26588359)
chr6 (282-338)||(29743203-29743259)
chr6 (237-338)||(1933468-1933579)
chr6 (237-274)||(4660860-4660897)
chr6 (237-274)||(5146358-5146395)
chr6 (237-274)||(5545091-5545128)
chr6 (239-276)||(7975983-7976020)
chr6 (237-274)||(12653970-12654007)
chr6 (237-274)||(15589777-15589814)
chr6 (237-274)||(19402504-19402541)
chr6 (237-274)||(23654681-23654718)
chr6 (237-274)||(30813489-30813526)
chr6 (302-338)||(67852-67888)
chr6 (302-338)||(9341502-9341538)
chr6 (237-273)||(20496605-20496641)
chr6 (237-276)||(31297077-31297117)
[»] chr1 (23 HSPs)
chr1 (237-338)||(36775492-36775597)
chr1 (237-338)||(48750390-48750495)
chr1 (237-338)||(34412882-34412979)
chr1 (237-338)||(16162033-16162139)
chr1 (237-274)||(10304995-10305032)
chr1 (237-276)||(11121385-11121424)
chr1 (237-276)||(13969306-13969345)
chr1 (237-274)||(4882029-4882066)
chr1 (301-338)||(7998003-7998040)
chr1 (237-274)||(12872038-12872075)
chr1 (237-274)||(12967399-12967436)
chr1 (282-327)||(13075487-13075532)
chr1 (237-274)||(13152859-13152896)
chr1 (296-337)||(19596305-19596346)
chr1 (237-274)||(29205700-29205737)
chr1 (237-274)||(34659307-34659344)
chr1 (237-274)||(44517580-44517617)
chr1 (293-338)||(44543477-44543522)
chr1 (297-338)||(45415763-45415804)
chr1 (237-274)||(46589559-46589596)
chr1 (293-338)||(49627118-49627163)
chr1 (249-338)||(41994669-41994762)
chr1 (237-276)||(47133162-47133202)
[»] scaffold0888 (1 HSPs)
scaffold0888 (237-338)||(1460-1565)
[»] chr4 (38 HSPs)
chr4 (237-338)||(1621293-1621398)
chr4 (237-338)||(18936004-18936109)
chr4 (237-338)||(27652165-27652270)
chr4 (249-338)||(33332384-33332477)
chr4 (237-338)||(36194930-36195035)
chr4 (237-338)||(6155001-6155107)
chr4 (237-338)||(31891065-31891174)
chr4 (260-334)||(7393424-7393502)
chr4 (249-338)||(43853665-43853758)
chr4 (299-338)||(35348529-35348568)
chr4 (296-338)||(43510418-43510460)
chr4 (249-338)||(2069380-2069468)
chr4 (237-338)||(9048886-9048991)
chr4 (299-338)||(2521001-2521040)
chr4 (240-274)||(3673899-3673933)
chr4 (237-267)||(30992555-30992585)
chr4 (301-338)||(3335994-3336031)
chr4 (237-274)||(7084374-7084411)
chr4 (237-274)||(8517111-8517148)
chr4 (237-274)||(11209965-11210002)
chr4 (237-274)||(13965975-13966012)
chr4 (237-274)||(14346842-14346879)
chr4 (301-338)||(21090364-21090401)
chr4 (301-338)||(22611405-22611442)
chr4 (237-274)||(24100565-24100602)
chr4 (237-274)||(24826071-24826108)
chr4 (293-338)||(28857623-28857668)
chr4 (237-274)||(38435009-38435046)
chr4 (237-274)||(42197985-42198022)
chr4 (237-274)||(43244033-43244070)
chr4 (237-274)||(44374941-44374978)
chr4 (237-274)||(45350722-45350759)
chr4 (237-274)||(45360201-45360238)
chr4 (237-274)||(55600198-55600235)
chr4 (237-274)||(56236483-56236520)
chr4 (240-276)||(14542181-14542217)
chr4 (249-310)||(37465723-37465788)
chr4 (249-338)||(52060719-52060810)
[»] chr5 (27 HSPs)
chr5 (237-338)||(14211428-14211533)
chr5 (237-338)||(28540688-28540793)
chr5 (237-338)||(2979088-2979193)
chr5 (250-338)||(19103262-19103354)
chr5 (237-338)||(39567471-39567576)
chr5 (249-334)||(35920790-35920879)
chr5 (299-338)||(13007430-13007469)
chr5 (250-338)||(19121113-19121205)
chr5 (299-338)||(25980358-25980397)
chr5 (294-338)||(11768211-11768255)
chr5 (299-338)||(9113573-9113612)
chr5 (299-338)||(34945594-34945633)
chr5 (238-276)||(15710953-15710991)
chr5 (240-274)||(17325333-17325367)
chr5 (237-274)||(4726669-4726706)
chr5 (237-274)||(5378713-5378750)
chr5 (237-274)||(9196683-9196720)
chr5 (237-274)||(17331760-17331797)
chr5 (237-274)||(23881768-23881805)
chr5 (285-326)||(24874742-24874783)
chr5 (237-274)||(34431496-34431533)
chr5 (237-274)||(39531060-39531097)
chr5 (237-274)||(40775172-40775209)
chr5 (239-276)||(42396164-42396201)
chr5 (237-274)||(42505065-42505102)
chr5 (237-276)||(8088005-8088045)
chr5 (237-276)||(8984781-8984821)
[»] scaffold0445 (1 HSPs)
scaffold0445 (299-338)||(1546-1585)
[»] scaffold0021 (1 HSPs)
scaffold0021 (250-313)||(4373-4440)
[»] scaffold0884 (1 HSPs)
scaffold0884 (299-338)||(1821-1860)
[»] scaffold0136 (1 HSPs)
scaffold0136 (299-338)||(9890-9929)
[»] scaffold0015 (1 HSPs)
scaffold0015 (249-337)||(3839-3931)
[»] scaffold0536 (1 HSPs)
scaffold0536 (237-274)||(3327-3364)
[»] scaffold0155 (1 HSPs)
scaffold0155 (237-274)||(35507-35544)


Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 10236768 - 10237104
Alignment:
Q  8 aatgtgttgtagtatgcaaatgtcgagattcgaacaccatacttcttcacatttaagaagtgaatttttagccaccaaacagtttgatnnnnnnnnnnng 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |    
T  10236768 aatgtgttgtagtatgcaaatgtcgagattcgaacaccatacttcttcacatttaagaagtgaatttttagccaccaaacagtttgataaaaaaaaaa-g 10236866  T
Q  108 ttacataatgtgtcaattaagcaagcaggaagtgaacatgattatcgctaataaatttgaaatttgttacatagtttgtgtattaagaaagcaggaagtg 207  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||    
T  10236867 ttacataatgtgtcaattaagcaagcaggaagtgaaaatgattatcgctaataaatttgaaatttgttacatagtttgtggattaagaaagcaaaaagtg 10236966  T
Q  208 aacatgactacacatctaata---nnnnnnnnacaaaaacaaaggatattcattcattcaaattgataga----atcagagacaataatatgatcaatat 300  Q
    |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||    
T  10236967 aacatgactacacatctaatatattttttttgacaaaaacaaaggatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatat 10237066  T
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  10237067 cgctaaaaacgtatagggtgaatctgcgaacaaactca 10237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 3309262 - 3309157
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| |||| |||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||| || |    
T  3309262 acaaaaataaagaatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaata 3309163  T
Q  333 aactca 338  Q
    ||||||    
T  3309162 aactca 3309157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 3460584 - 3460511
Alignment:
Q  256 attcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatct 325  Q
    |||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3460584 attcattcaaattgatagaatatatcagagacaataacatgatcaatatcgctaaaaacgtataaggtgaatct 3460511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 325
Target Start/End: Complemental strand, 3465652 - 3465560
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatct 325  Q
    |||| |||||| |||||||||||||| |||||||||||||    |||||||||||| ||||||||||| ||||||||| ||||| ||||||||    
T  3465652 acaagaacaaaagatattcattcatttaaattgatagaatatatcagagacaataacatgatcaatattgctaaaaacatatagagtgaatct 3465560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 14955847 - 14955741
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaatc----agagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||  |||||||||||||| |||||||||||||     ||||||||||| ||||||||||||||||||||  || ||| ||||||||| |||    
T  14955847 acaaaaacaaaatgatattcattcatttaaattgatagaatacataagagacaataacatgatcaatatcgctaaaaatataaaggatgaatctgcgaac 14955748  T
Q  332 aaactca 338  Q
    |||||||    
T  14955747 aaactca 14955741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 12553975 - 12554069
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgct-aaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||||||    |||||| ||||||| ||  |||| || ||| ||||||||| ||||||||||||| ||||||||||    
T  12553975 gatattcattcattcaaattgatagagtatatcagatacaataacatattcaacattgctaaaaaacgtaaagggtgaatctgcgaacaaactca 12554069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 26491749 - 26491710
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  26491749 acaaaaacaaacgatattcattcattcaaattgatagaat 26491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 34128517 - 34128572
Alignment:
Q  283 caataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||| |||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  34128517 caataatatgttcaatatcgcaaaaaatgtaaagggtgaatctgcaaacaacctca 34128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 18763722 - 18763680
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  18763722 aatatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 18763680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 27097253 - 27097295
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  27097253 aatatctctaaaaacgtaaagggtgaatctgcaaacaaactca 27097295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 4100586 - 4100547
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  4100586 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 4100547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 4779004 - 4778965
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  4779004 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 4778965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 274
Target Start/End: Complemental strand, 12705153 - 12705118
Alignment:
Q  239 aaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12705153 aaaaataaaggatattcattcattcaaattgataga 12705118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 324
Target Start/End: Complemental strand, 14416473 - 14416381
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatc 324  Q
    |||||||||||  |||||| |||||||||||||||||||    |||||| ||||||| ||| |||| |||||||| |||||| | ||||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaataacatgttcaacatcgctaacaacgtaaatggtgaatc 14416381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 31788707 - 31788668
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  31788707 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 31788668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 3527455 - 3527418
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  3527455 acaaaaataaacgatattcattcattcaaattgataga 3527418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 4878400 - 4878437
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4878400 acaaaaataaatgatattcattcattcaaattgataga 4878437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 10929922 - 10929877
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| |||||||||||| || ||||||||| ||||||||||||||    
T  10929922 atcaagatcgctaaaaacataaagggtgaatatgcaaacaaactca 10929877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 11550332 - 11550369
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11550332 acaaaaataaatgatattcattcattcaaattgataga 11550369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 13878661 - 13878698
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  13878661 acaaaaataaacgatattcattcattcaaattgataga 13878698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 14018786 - 14018823
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  14018786 acaaaaataaacgatattcattcattcaaattgataga 14018823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 15920322 - 15920285
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  15920322 acaaaaataaatgatattcattcattcaaattgataga 15920285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 16136547 - 16136510
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  16136547 acaaaaataaacgatattcattcattcaaattgataga 16136510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 18141147 - 18141184
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  18141147 acaaaaataaatgatattcattcattcaaattgataga 18141184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 20560785 - 20560822
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  20560785 acaaaaataaacgatattcattcattcaaattgataga 20560822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 25068310 - 25068273
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  25068310 acaaaaataaacgatattcattcattcaaattgataga 25068273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 29543262 - 29543225
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  29543262 acaaaaataaacgatattcattcattcaaattgataga 29543225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 33012517 - 33012480
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  33012517 acaaaaataaacgatattcattcattcaaattgataga 33012480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 33759991 - 33760079
Alignment:
Q  250 atattcattcattcaaattgatagaa--tcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaact 336  Q
    |||||||||||||||||| || || |  | ||| ||||||| ||| |||| ||||||||||||||| ||| ||| |||| |||||||||    
T  33759991 atattcattcattcaaatcgagagtacattagatacaataacatgttcaacatcgctaaaaacgtaaaggatgagtctgtaaacaaact 33760079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 35333974 - 35333937
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  35333974 acaaaaataaacgatattcattcattcaaattgataga 35333937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 36868477 - 36868440
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  36868477 acaaaaataaacgatattcattcattcaaattgataga 36868440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 40125833 - 40125796
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  40125833 acaaaaataaatgatattcattcattcaaattgataga 40125796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 43696337 - 43696300
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  43696337 acaaaaataaacgatattcattcattcaaattgataga 43696300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 5754748 - 5754712
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgatagaat 276  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  5754748 aaaataaacgatattcattcattcaaattgatagaat 5754712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 6358676 - 6358769
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||| ||    |||||| |||||||  |||||||||||  |||||||||| |  |||||||| | || |||||||    
T  6358676 gatattcattcattcaaattgatggaatacatcagatacaataacttgatcaatatcattaaaaacgtaaatagtgaatctacgaaaaaactca 6358769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 32448410 - 32448450
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  32448410 acaaaaacaaaatgatattcattcattcaaattgatagaat 32448450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 37994590 - 37994550
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  37994590 acaaaaacaaaacgatattcattcattcaaattgatagaat 37994550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 21289596 - 21289701
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| ||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  21289596 acaaaaataaaggatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaaca 21289695  T
Q  333 aactca 338  Q
    ||||||    
T  21289696 aactca 21289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 16235732 - 16235627
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||| |||||| |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  16235732 acaaaaacaaatgatatttattcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtatagggtaaatctgcgaaca 16235633  T
Q  333 aactca 338  Q
    ||||||    
T  16235632 aactca 16235627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 51924033 - 51923928
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||| || || ||| ||||    
T  51924033 acaaaaacaaaggatattcattcattcaaattgatagaatgcatcagagacaataacatgatcaatatcgctaaaaacgtataggatggatatgcgaaca 51923934  T
Q  333 aactca 338  Q
    ||||||    
T  51923933 aactca 51923928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 27706008 - 27706111
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||| |||||||||||||||||||||| |||||||  ||||    
T  27706008 acaaaaacaaaggatattcattcattcaaattgatagaatacatcagagacaataacatgatcgatatcgctaaaaacgtatagggcgaatctgggaaca 27706107  T
Q  333 aact 336  Q
    ||||    
T  27706108 aact 27706111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 8915015 - 8914913
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaac 335  Q
    |||||| ||||||||||||||||||||||||||||||    |||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||    
T  8915015 aaaacagaggatattcattcattcaaattgatagaatacatcagagacaataacatcatcaatatcgctaaaaacgtataaggtgaatctgcgaacaaac 8914916  T
Q  336 tca 338  Q
    |||    
T  8914915 tca 8914913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 7546922 - 7546816
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtat-agggtgaatctgcaaac 331  Q
    ||||||| |||||||||||||| ||||||||||||| |||    || ||||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  7546922 acaaaaataaaggatattcatttattcaaattgataaaatacatcaaagacaatgacatgatcaatatcgctaaaaacgtataagggtgaatctgcaaac 7546823  T
Q  332 aaactca 338  Q
    |||||||    
T  7546822 aaactca 7546816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 42461059 - 42460950
Alignment:
Q  237 acaaaaacaaaggatattcattcattca----aattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgca 328  Q
    ||||||||||||||||||||||||||||    |||||| |||||    |||||||||||| |||||||||||||||| ||| ||| |||||||||||||     
T  42461059 acaaaaacaaaggatattcattcattcattcaaattgacagaatacatcagagacaataacatgatcaatatcgctataaatgtaaagggtgaatctgcg 42460960  T
Q  329 aacaaactca 338  Q
    ||||||||||    
T  42460959 aacaaactca 42460950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 53508516 - 53508427
Alignment:
Q  249 gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaa 334  Q
    |||||||||||||| || ||||||||||    |||| ||||||| ||||||||||||||||||||| || ||||||||||||| ||||||    
T  53508516 gatattcattcatttaatttgatagaatacatcagatacaataacatgatcaatatcgctaaaaacataaagggtgaatctgcgaacaaa 53508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 27856451 - 27856366
Alignment:
Q  257 ttcattcaaattgatagaa----tcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||| ||    ||||| ||||||| |||||||||||||||||||||||| | | ||||||||| ||||||||||    
T  27856451 ttcattcaaattgataaaacacatcagacacaataacatgatcaatatcgctaaaaacgtaaaagatgaatctgcgaacaaactca 27856366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 51487391 - 51487287
Alignment:
Q  239 aaaaacaaaggatattcattcattcaaattgatagaatc---------agagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaa 329  Q
    ||||| ||||||||||||||||||||||||||||| ||          ||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |    
T  51487391 aaaaataaaggatattcattcattcaaattgataggatagaatacattagagataataacatgattaatatcgctaaaaacgtaaagggtgaatctgcga 51487292  T
Q  330 acaaa 334  Q
    |||||    
T  51487291 acaaa 51487287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 31271677 - 31271719
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31271677 aatatcgctaaaaacgtaaagggtgaatctgcaaacaaactca 31271719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 41818509 - 41818416
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||||||    |||||||| ||||| || || ||||||||||||||  || |||||||| || | ||||||||||    
T  41818509 gatattcattcattcaaattgatagaatacatcagagataataacatcattaatatcgctaaaaatataaagggtgaaactacgaacaaactca 41818416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 6954544 - 6954583
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  6954544 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 6954583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 33076733 - 33076696
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  33076733 acaaaaacaaatgatattcattcattcaaattgataga 33076696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 24175962 - 24176018
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||| ||| |||| ||||||||||| ||| ||||||||| ||||||||||||||    
T  24175962 acaataacatgttcaacatcgctaaaaatgtaaagggtgaatttgcaaacaaactca 24176018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 38142814 - 38142726
Alignment:
Q  256 attcattcaaattgatagaatc----agagacaataatatgatca--atatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||||||     ||| ||| ||| |||||||  ||||||||||||| ||| ||||||||| ||||||||||||||    
T  38142814 attcattcaaattgatagaatacattagatacagtaaaatgatcagcatatcgctaaaaatgtaaagggtgaatatgcaaacaaactca 38142726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 48200038 - 48199982
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||| ||| |||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  48200038 acaataacatgttcaacatcgctaaaaacgtaaagggtgaatttgcgaacaaactca 48199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 51303482 - 51303530
Alignment:
Q  290 atgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| |||||| ||||||||||||| ||||||||||| ||||||||||    
T  51303482 atgattaatatcactaaaaacgtatatggtgaatctgcgaacaaactca 51303530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 44959821 - 44959860
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  44959821 atcgctaaaaacgtaaagggtgaatctgcaaataaactca 44959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 52922965 - 52923004
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  52922965 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 52923004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 7448710 - 7448744
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgataga 274  Q
    |||||||| ||||||||||||||||||||||||||    
T  7448710 aaaacaaacgatattcattcattcaaattgataga 7448744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 7456852 - 7456886
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgataga 274  Q
    |||||||| ||||||||||||||||||||||||||    
T  7456852 aaaacaaacgatattcattcattcaaattgataga 7456886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 48650579 - 48650621
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||    
T  48650579 aatatcgctaaaaatgtaaagggtgaatctgcgaacaaactca 48650621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 52115812 - 52115879
Alignment:
Q  250 atattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgta 313  Q
    ||||||||| |||||||||||||||    ||| |||||||||| |||||  |||||||||||||||||    
T  52115812 atattcatttattcaaattgatagaatacatcggagacaataacatgattgatatcgctaaaaacgta 52115879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 628765 - 628810
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  628765 atcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 628810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 4020046 - 4020009
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4020046 acaaaaataaatgatattcattcattcaaattgataga 4020009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 11819553 - 11819516
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11819553 acaaaaataaacgatattcattcattcaaattgataga 11819516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 13701662 - 13701699
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  13701662 acaaaaataaacgatattcattcattcaaattgataga 13701699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 14585931 - 14585894
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  14585931 acaaaaataaacgatattcattcattcaaattgataga 14585894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 19645659 - 19645622
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19645659 acaaaaataaacgatattcattcattcaaattgataga 19645622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 24483356 - 24483393
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  24483356 acaaaaataaacgatattcattcattcaaattgataga 24483393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 36623923 - 36623960
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  36623923 acaaaaataaatgatattcattcattcaaattgataga 36623960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 45047966 - 45047929
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  45047966 acaaaaataaatgatattcattcattcaaattgataga 45047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 49627764 - 49627801
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  49627764 acaaaaataaacgatattcattcattcaaattgataga 49627801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 50194177 - 50194222
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  50194177 atcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 50194222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 53807700 - 53807745
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  53807700 atcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 53807745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 55090359 - 55090396
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  55090359 acaaaaataaacgatattcattcattcaaattgataga 55090396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 55455331 - 55455294
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  55455331 acaaaaataaacgatattcattcattcaaattgataga 55455294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 628716 - 628756
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  628716 acaaaaacaaaatgatattcattcattcaaattgatagaat 628756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 20252101 - 20252069
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgata 272  Q
    |||||||| ||||||||||||||||||||||||    
T  20252101 aaaacaaatgatattcattcattcaaattgata 20252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 32881155 - 32881191
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgatagaat 276  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  32881155 aaaaaaaatgatattcattcattcaaattgatagaat 32881191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 35501438 - 35501470
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgata 272  Q
    |||||||| ||||||||||||||||||||||||    
T  35501438 aaaacaaatgatattcattcattcaaattgata 35501470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 46304371 - 46304407
Alignment:
Q  302 gctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  46304371 gctaaaaacgtaaagggtgaatctgcgaacaaactca 46304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 42046530 - 42046425
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||||||||||||||||||||| ||||||||    ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  42046530 acaaaaacaaaggatattcattcattcaaatcgatagaatacatcagtgacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaaca 42046431  T
Q  333 aactca 338  Q
    ||||||    
T  42046430 aactca 42046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 14585978 - 14585881
Alignment:
Q  245 aaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14585978 aaaggatattcattcattcaaattgatagaatacatcagagataataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaactca 14585881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 18890479 - 18890584
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||| |||||||||||||||||||||||||||||||||||    |||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  18890479 acaacaacaaaggatattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacggatagggtgaatctgcgaaca 18890578  T
Q  333 aactca 338  Q
    ||||||    
T  18890579 aactca 18890584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 41896825 - 41896721
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||||||||||| |||||||||||||||||||||||||||    ||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  41896825 acaaaaacaaagaatattcattcattcaaattgatagaatacatcagag-caataacatgatcaatattgctaaaaacgtatagggtgaatctgcgaaca 41896727  T
Q  333 aactca 338  Q
    ||||||    
T  41896726 aactca 41896721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 43833788 - 43833881
Alignment:
Q  249 gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||| || |||||||||||||||    || ||||||||| |||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  43833788 gatattcatccaatcaaattgatagaatacatcaaagacaataacatgatcaatatcgctaaaaaagtaaatggtgaatctgcaaacaaactca 43833881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 8868102 - 8868012
Alignment:
Q  252 attcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||||||||||    |||| ||||||| |||||||| || |||||||||||| | ||||||| ||| ||||||||||    
T  8868102 attcattcattcaaattgatagaatacatcagatacaataacatgatcaacattgctaaaaacgtaaaaggtgaatttgcgaacaaactca 8868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 39657676 - 39657637
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  39657676 acaaaaacaaaggatattcgttcattcaaattgatagaat 39657637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 24099096 - 24099141
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  24099096 atcaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 24099141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 7883087 - 7883126
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  7883087 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 7883126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 8054474 - 8054513
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  8054474 acaaaaataaatgatattcattcattcaaattgatagaat 8054513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 8412368 - 8412407
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  8412368 atcgctaaaaacataaagggtgaatctgcaaacaaactca 8412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 16928603 - 16928642
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  16928603 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 16928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 30568167 - 30568206
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  30568167 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 30568206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 41060085 - 41060148
Alignment:
Q  275 atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||| ||||||| ||| |||| ||| ||||||||||| ||| ||||||||| ||||||||||    
T  41060085 atcagatacaataacatgttcaacatcactaaaaacgtaaaggatgaatctgcgaacaaactca 41060148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 2234130 - 2234167
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  2234130 acaaaaataaacgatattcattcattcaaattgataga 2234167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 3673682 - 3673645
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  3673682 cgctaaaaacgtaaagggtgaaactgcaaacaaactca 3673645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 5457519 - 5457482
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  5457519 acaaaaataaatgatattcattcattcaaattgataga 5457482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 6314962 - 6314925
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  6314962 acaaaaataaatgatattcattcattcaaattgataga 6314925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 7198035 - 7198080
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||||||||||||| || |||||||    
T  7198035 atcaagatcgctaaaaacgtaaagggtgaatctgcgaataaactca 7198080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 21238037 - 21237992
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||||||||||||  ||||||||||    
T  21238037 atcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactca 21237992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 24790830 - 24790867
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  24790830 acaaaaataaacgatattcattcattcaaattgataga 24790867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 31202917 - 31202880
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  31202917 acaaaaataaacgatattcattcattcaaattgataga 31202880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 31712740 - 31712777
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  31712740 acaaaaataaatgatattcattcattcaaattgataga 31712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 37613105 - 37613068
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  37613105 acaaaaataaacgatattcattcattcaaattgataga 37613068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 14530587 - 14530619
Alignment:
Q  242 aacaaaggatattcattcattcaaattgataga 274  Q
    ||||||||| |||||||||||||||||||||||    
T  14530587 aacaaaggacattcattcattcaaattgataga 14530619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 31013457 - 31013493
Alignment:
Q  302 gctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  31013457 gctaaaaacgtaaagggtgaatctgcgaacaaactca 31013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 40618863 - 40618903
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  40618863 acaaaaacaaaacgatattcattcattcaaattgatagaat 40618903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 41684616 - 41684580
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaac 335  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41684616 atcgctaaaaacgtaaagggtgaatatgcaaacaaac 41684580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 35133256 - 35133151
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| ||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  35133256 acaaaaataaaggatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgttaaaaacgtatagggtgaatctgcgaaca 35133157  T
Q  333 aactca 338  Q
    ||||||    
T  35133156 aactca 35133151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 48931016 - 48930911
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||||||||||||||||||||||||| |||||||||||||    |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  48931016 acaaaaacaaaggatattcattcatttaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtataggttgaatctgcgaaca 48930917  T
Q  333 aactca 338  Q
    ||||||    
T  48930916 aactca 48930911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 28476539 - 28476430
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaa----attgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgca 328  Q
    ||||||||||||||||||||||||||||     |||||||||||    |||||| ||||| ||||||||||| |||||||||||| | ||||||||||||    
T  28476539 acaaaaacaaaggatattcattcattcattcatattgatagaatacatcagagataataacatgatcaatattgctaaaaacgtaaatggtgaatctgca 28476440  T
Q  329 aacaaactca 338  Q
    ||||||||||    
T  28476439 aacaaactca 28476430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 25068354 - 25068267
Alignment:
Q  249 gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||| ||||||||||||||||    |||| ||||||| || ||||||||||||||||||||| | ||||||||||||||||    
T  25068354 gatattcattctttcaaattgatagaatacatcagaaacaataacatcatcaatatcgctaaaaacgtaaatggtgaatctgcaaaca 25068267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 25255526 - 25255431
Alignment:
Q  245 aaaggatattcattcattcaaattgatagaa--tcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||| ||||||||||||||||||||| || |  ||| | | ||||| ||| |||||||||||||||||||| |||||| |||||| ||||||||||    
T  25255526 aaagaatattcattcattcaaattgagagtacatcaaatataataacatgttcaatatcgctaaaaacgtaaagggtgtatctgcgaacaaactca 25255431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 336
Target Start/End: Complemental strand, 11344119 - 11344015
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||  |||||||||| ||||||||||||| |||    |||| ||||||| |||||||| ||||||||||||||| | | |||||||||| ||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaataacatgatcaacatcgctaaaaacgtaaatgatgaatctgcatac 11344020  T
Q  332 aaact 336  Q
    |||||    
T  11344019 aaact 11344015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 22743196 - 22743149
Alignment:
Q  290 atgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactc 337  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  22743196 atgatcaatatcgctaaaaacgtatagggtgaatctgcgaaaaaactc 22743149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 39171438 - 39171477
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  39171438 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 39171477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 8001394 - 8001433
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  8001394 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 8001433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 26623613 - 26623676
Alignment:
Q  275 atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||| ||||||| ||| | || |||||| |||||||| ||||||||||||| ||||||||||    
T  26623613 atcagatacaataacatgtttaacatcgcttaaaacgtaaagggtgaatctgcgaacaaactca 26623676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 31254785 - 31254820
Alignment:
Q  239 aaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31254785 aaaaataaaggatattcattcattcaaattgataga 31254820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 34899455 - 34899494
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  34899455 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 34899494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 40993400 - 40993361
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  40993400 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 40993361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 335
Target Start/End: Original strand, 24069182 - 24069284
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||  |||||||||| |||||||| ||||||||    |||| | ||||| || ||||| ||||||||||||||| ||||||||||| | |||    
T  24069182 acaaaaacaaaacgatattcattgattcaaatcgatagaatacctcagataaaataacataatcaacatcgctaaaaacgta-agggtgaatctccgaac 24069280  T
Q  332 aaac 335  Q
    ||||    
T  24069281 aaac 24069284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 25854881 - 25854915
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgataga 274  Q
    |||||||| ||||||||||||||||||||||||||    
T  25854881 aaaacaaacgatattcattcattcaaattgataga 25854915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 45349644 - 45349686
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||| |||||||| |||| ||||||||||    
T  45349644 aatatcgctaaaaacgtaaagggtgaacctgcgaacaaactca 45349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 2623061 - 2623024
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  2623061 acaaaaataaacgatattcattcattcaaattgataga 2623024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 4621032 - 4621069
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4621032 acaaaaataaacgatattcattcattcaaattgataga 4621069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 6667864 - 6667827
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  6667864 acaaaaataaacgatattcattcattcaaattgataga 6667827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 8319763 - 8319726
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8319763 acaaaaacaaatgatattcattcatttaaattgataga 8319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 21991131 - 21991094
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  21991131 acaaaaataaacgatattcattcattcaaattgataga 21991094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 24351240 - 24351195
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  24351240 atcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 24351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 26017324 - 26017361
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  26017324 acaaaaataaatgatattcattcattcaaattgataga 26017361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 29617550 - 29617587
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  29617550 cgctaaaaacgtaaatggtgaatctgcaaacaaactca 29617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 34893555 - 34893518
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  34893555 acaaaaataaatgatattcattcattcaaattgataga 34893518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 37837251 - 37837288
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  37837251 acaaaaacaaacgatattcattcattcaaatcgataga 37837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 38277266 - 38277229
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  38277266 acaaaaataaacgatattcattcattcaaattgataga 38277229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 39707737 - 39707700
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  39707737 acaaaaataaacgatattcattcattcaaattgataga 39707700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 43847442 - 43847405
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  43847442 acaaaaataaatgatattcattcattcaaattgataga 43847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 44482530 - 44482567
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  44482530 acaaaaataaacgatattcattcattcaaattgataga 44482567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 48643478 - 48643515
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  48643478 acaaaaataaacgatattcattcattcaaattgataga 48643515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 9785786 - 9785750
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatag 273  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  9785786 acaaaaataaacgatattcattcattcaaattgatag 9785750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 37375709 - 37375745
Alignment:
Q  238 caaaaacaaaggatattcattcattcaaattgataga 274  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  37375709 caaaaataaacgatattcattcattcaaattgataga 37375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 8103034 - 8102929
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||||||||||||||||||||||||||| |||||||||||    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  8103034 acaaaaacaaaggatattcattcattcatattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtaaaaggtgaatctgcaaaca 8102935  T
Q  333 aactca 338  Q
    ||||||    
T  8102934 aactca 8102929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 30776971 - 30776866
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||| |||||||||||||||| |||||||||||    |||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  30776971 acaaaaacaaatgatattcattcattcatattgatagaatacgtcagagacaataacatgatcaatatcgctaaaaacgtaaagggtgaatctgcgaaca 30776872  T
Q  333 aactca 338  Q
    ||||||    
T  30776871 aactca 30776866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 14802128 - 14802030
Alignment:
Q  245 aaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgt-atagggtgaatctgcaaacaaactca 338  Q
    |||| |||||||||||||||||||||||||||    |||||||||||| ||||| ||||||||||||||||| |||| |||||||||| ||||||||||    
T  14802128 aaagaatattcattcattcaaattgatagaatacatcagagacaataacatgattaatatcgctaaaaacgtaatagagtgaatctgcgaacaaactca 14802030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 546335 - 546234
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||||||||||||||    ||||||||||||    |||| ||||| | |||||||||||||||||||||||||||| ||||||||| ||||    
T  546335 acaaaaacaaaggatattcattca----aattgatagaatatatcagacacaatgacatgatcaatatcgctaaaaacgtataggatgaatctgcgaaca 546240  T
Q  333 aactca 338  Q
    ||||||    
T  546239 aactca 546234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 1523711 - 1523621
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaat 323  Q
    ||||||| |||||||||||||||||||| |||| ||||||    |||||| ||||||||||||||||| ||| |||||||| ||| |||||    
T  1523711 acaaaaataaaggatattcattcattcatattggtagaatacatcagagaaaataatatgatcaatattgctgaaaacgtaaaggatgaat 1523621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 679402 - 679311
Alignment:
Q  251 tattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||| |||||||||||||||||||||    |||| ||||||| || ||||| || |||||||||||| ||||||||||| | ||||||||||    
T  679402 tatttattcattcaaattgatagaatacatcagatacaataacataatcaacattgctaaaaacgtaaagggtgaatctacgaacaaactca 679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 6957400 - 6957344
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||  ||||||||||    
T  6957400 acaataatatgttcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactca 6957344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 26588303 - 26588359
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||| |||||||| |||||||||||| || |||||||| |||||||||||||||    
T  26588303 acaataacatgatcaacatcgctaaaaacttaaagggtgaagctgcaaacaaactca 26588359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 29743259 - 29743203
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||| || ||||||||||||||||||||| ||||||||| ||  ||||||||||    
T  29743259 acaataacatcatcaatatcgctaaaaacgtaaagggtgaatttgagaacaaactca 29743203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 1933468 - 1933579
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgataga---------atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctg 326  Q
    |||||||||||| || |||||||||||||||||||||||         |||| | ||||||| || ||||| |||| |||||||||| ||| ||||||||    
T  1933468 acaaaaacaaagtgacattcattcattcaaattgatagaatatatcatatcatatacaataacatcatcaaaatcgttaaaaacgtaaaggatgaatctg 1933567  T
Q  327 caaacaaactca 338  Q
    | ||||||||||    
T  1933568 cgaacaaactca 1933579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 4660897 - 4660860
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4660897 acaaaaataaacgatattcattcattcaaattgataga 4660860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 5146395 - 5146358
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  5146395 acaaaaataaacgatattcattcattcaaattgataga 5146358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 5545128 - 5545091
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  5545128 acaaaaataaatgatattcattcattcaaattgataga 5545091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 7975983 - 7976020
Alignment:
Q  239 aaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  7975983 aaaaacaaacgatattcattcatttaaattgatagaat 7976020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 12653970 - 12654007
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  12653970 acaaaaataaacgatattcattcattcaaattgataga 12654007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 15589777 - 15589814
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  15589777 acaaaaataaacgatattcattcattcaaattgataga 15589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 19402504 - 19402541
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19402504 acaaaaataaacgatattcattcattcaaattgataga 19402541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 23654718 - 23654681
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  23654718 acaaaaataaacgatattcattcattcaaattgataga 23654681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 30813526 - 30813489
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  30813526 acaaaaataaacgatattcattcattcaaattgataga 30813489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 67852 - 67888
Alignment:
Q  302 gctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  67852 gctaaaaacgtaaagggtgaatctgcgaacaaactca 67888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 9341502 - 9341538
Alignment:
Q  302 gctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  9341502 gctaaaaacgtaaagggtgaatctgcgaacaaactca 9341538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 20496641 - 20496605
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatag 273  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  20496641 acaaaaataaatgatattcattcattcaaattgatag 20496605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 31297117 - 31297077
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaat 31297077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 36775492 - 36775597
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| ||||||||||||||||||||||||||| ||||    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36775492 acaaaaataaaggatattcattcattcaaattgattgaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaaca 36775591  T
Q  333 aactca 338  Q
    ||||||    
T  36775592 aactca 36775597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 48750495 - 48750390
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||| ||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  48750495 acaaacacaaaggatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtatagggtgaatatgcgaaca 48750396  T
Q  333 aactca 338  Q
    ||||||    
T  48750395 aactca 48750390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 34412882 - 34412979
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaatcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaact 336  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  34412882 acaaaaacaaaggatgttcattcattcaaattgatagaat----aacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaacaaact 34412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 16162139 - 16162033
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgct-aaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||| | | | ||||||||| ||||||||||||| |||    
T  16162139 acaaaaacaaaggatattcattcattcatattgatagaatacatcagagacaataatatgatcaatgttggtaaaaaacgtaaagggtgaatctgcgaac 16162040  T
Q  332 aaactca 338  Q
    |||||||    
T  16162039 aaactca 16162033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 10305032 - 10304995
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10305032 acaaaaataaaggatattcattcattcaaattgataga 10304995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 11121424 - 11121385
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  11121424 acaaaaataaatgatattcattcattcaaattgatagaat 11121385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 13969306 - 13969345
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  13969306 acaaaaataaatgatattcattcattcaaattgatagaat 13969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 4882029 - 4882066
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4882029 acaaaaataaacgatattcattcattcaaattgataga 4882066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 7998040 - 7998003
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  7998040 cgctaaaaacgtaaaggatgaatctgcaaacaaactca 7998003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 12872075 - 12872038
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  12872075 acaaaaataaacgatattcattcattcaaattgataga 12872038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 12967399 - 12967436
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  12967399 acaaaaataaatgatattcattcattcaaattgataga 12967436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 13075487 - 13075532
Alignment:
Q  282 acaataatatgatcaatatcgctaaaaacgtatagggtgaatctgc 327  Q
    ||||||| || ||||||||||||||||| ||| |||||||||||||    
T  13075487 acaataacataatcaatatcgctaaaaaagtaaagggtgaatctgc 13075532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 13152896 - 13152859
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  13152896 acaaaaataaacgatattcattcattcaaattgataga 13152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 19596305 - 19596346
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactc 337  Q
    |||||||||||||||||| | ||||||||||| |||||||||    
T  19596305 aatatcgctaaaaacgtaaaaggtgaatctgcgaacaaactc 19596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 29205737 - 29205700
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  29205737 acaaaaataaacgatattcattcattcaaattgataga 29205700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 34659307 - 34659344
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  34659307 acaaaaataaatgatattcattcattcaaattgataga 34659344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 44517617 - 44517580
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  44517617 acaaaaataaacgatattcattcattcaaattgataga 44517580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 44543522 - 44543477
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  44543522 atcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 44543477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 45415804 - 45415763
Alignment:
Q  297 atatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||    
T  45415804 atatcgctaaaaacgtaaagggtgaatatgcgaacaaactca 45415763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 46589596 - 46589559
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  46589596 acaaaaataaatgatattcattcattcaaattgataga 46589559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 49627163 - 49627118
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  49627163 atcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 49627118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 41994762 - 41994669
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||| ||| |||||||||||||||    |||||| ||||||| |||||||| ||| |||||||  || ||| ||||| ||| ||||||||||    
T  41994762 gatatttatttattcaaattgatagaaaatatcagatacaataacatgatcaaaatcactaaaaatttaaaggatgaatatgcgaacaaactca 41994669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 47133202 - 47133162
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  47133202 acaaaaacaaaacgatattcattcattcaaattgatagaat 47133162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 1460 - 1565
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||||| |||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||| || |||||||||||||||||||||| ||||    
T  1460 acaaaagcaaaggatattcattcattcaaattgatagaatacatcagagacaataacatgatcaatatcccttaaaacgtatagggtgaatctgcgaaca 1559  T
Q  333 aactca 338  Q
    ||||||    
T  1560 aactca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 1621293 - 1621398
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| |||||||||||||||||||||||| |||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  1621293 acaaaaataaaggatattcattcattcaaatttatagaatacatcagagacaataacatgatcaatattgctaaaaacgtatagggtgaatctgcgaaca 1621392  T
Q  333 aactca 338  Q
    ||||||    
T  1621393 aactca 1621398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 18936109 - 18936004
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| ||| ||||||||||||||||||||||||||||    |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  18936109 acaaaaataaaagatattcattcattcaaattgatagaatacatcagagacaatagcatgatcaatatcgctaaaaacatatagggtgaatctgcaaaca 18936010  T
Q  333 aactca 338  Q
    ||||||    
T  18936009 aactca 18936004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 27652270 - 27652165
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    |||||| |||||||||||||||||||||||||||||||||    || ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  27652270 acaaaatcaaaggatattcattcattcaaattgatagaatacatcaaagacaataacatgatcgatatcgctaaaaacgtataggatgaatctgcgaaca 27652171  T
Q  333 aactca 338  Q
    ||||||    
T  27652170 aactca 27652165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 33332384 - 33332477
Alignment:
Q  249 gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  33332384 gatatccattcattcaaattgatagaatacatcagagacaataatatgatcaatatcgctaaaaacgtaaagggtgaatttgcgaacaaactca 33332477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 36195035 - 36194930
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||||||||||||||||||||||||||||    |||||| | ||||| | |||||||||| |||||||| |||| ||||||||||| ||||    
T  36195035 acaaaaacaaaggatattcattcattcaaattgatagaatacatcagacataataacacgatcaatatcactaaaaacatataaggtgaatctgcgaaca 36194936  T
Q  333 aactca 338  Q
    ||||||    
T  36194935 aactca 36194930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 6155001 - 6155107
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaatc----agagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||  ||||||||||||||||||||||||||||     ||| ||||||| |||||||| |||||||||||| || ||||||||||||| |||    
T  6155001 acaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaataaaatgatcaacatcgctaaaaacataaagggtgaatctgcgaac 6155100  T
Q  332 aaactca 338  Q
    |||||||    
T  6155101 aaactca 6155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 31891065 - 31891174
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga----atcagagacaataatat----gatcaatatcgctaaaaacgtatagggtgaatctgca 328  Q
    ||||||| ||| |||||| |||||||||||||||||||    ||||||||||| || ||    |||||||||||||||||||||||||||||||| |||     
T  31891065 acaaaaataaatgatatttattcattcaaattgatagaatacatcagagacaaaaacatgatcgatcaatatcgctaaaaacgtatagggtgaatttgcg 31891164  T
Q  329 aacaaactca 338  Q
    ||||||||||    
T  31891165 aacaaactca 31891174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 7393502 - 7393424
Alignment:
Q  260 attcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaa 334  Q
    |||||||||||||||||    |||| |||||| ||||||||||||||||||||| ||| ||||||||| ||| ||||||    
T  7393502 attcaaattgatagaatatatcagatacaatattatgatcaatatcgctaaaaatgtaaagggtgaatatgcgaacaaa 7393424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 43853758 - 43853665
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||||||    |||||| ||||||| ||  |||| ||||||||||| ||| | ||| ||||||| ||||||||||    
T  43853758 gatattcattcattcaaattgatagaatacatcagatacaataacatactcaacatcgctaaaaatgtaaatggttaatctgcgaacaaactca 43853665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 35348568 - 35348529
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35348568 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 35348529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 43510460 - 43510418
Alignment:
Q  296 aatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  43510460 aatatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 43510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 2069380 - 2069468
Alignment:
Q  249 gatattcattcattcaaattgatagaatcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||| |||||| ||||||||||||| | |  |||||| |||||||||||||||||||||||| || || ||| ||| ||||| ||||    
T  2069380 gatattcgttcatttaaattgatagaat-acatgcaataacatgatcaatatcgctaaaaacgtagagagtaaatttgcgaacaatctca 2069468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 9048991 - 9048886
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaa----tcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaac 331  Q
    |||||||||||  |||||||||||||||||||||||||||    | ||| ||||||| ||||  || |||| | |||||||| |||||||||||| ||||    
T  9048991 acaaaaacaaaacgatattcattcattcaaattgatagaataattgagatacaataacatgactaacatcg-ttaaaacgtaaagggtgaatctgtaaac 9048893  T
Q  332 aaactca 338  Q
    |||||||    
T  9048892 aaactca 9048886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 2521040 - 2521001
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  2521040 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 2521001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 3673933 - 3673899
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||||||| |||||||||||||||||||||||    
T  3673933 aaaacaaaggacattcattcattcaaattgataga 3673899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 30992585 - 30992555
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaat 267  Q
    |||||||||||||||||||||||||||||||    
T  30992585 acaaaaacaaaggatattcattcattcaaat 30992555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 3335994 - 3336031
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  3335994 cgctaaaaacgtaaaggatgaatctgcaaacaaactca 3336031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 7084411 - 7084374
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  7084411 acaaaaataaacgatattcattcattcaaattgataga 7084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 8517111 - 8517148
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  8517111 acaaaaataaacgatattcattcattcaaattgataga 8517148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 11209965 - 11210002
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11209965 acaaaaataaaagatattcattcattcaaattgataga 11210002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 13966012 - 13965975
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  13966012 acaaaaataaacgatattcattcattcaaattgataga 13965975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 14346879 - 14346842
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  14346879 acaaaaataaacgatattcattcattcaaattgataga 14346842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 21090401 - 21090364
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  21090401 cgctaaaaacgtaaaggatgaatctgcaaacaaactca 21090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 22611442 - 22611405
Alignment:
Q  301 cgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  22611442 cgctaaaaacgtaaagggtgaatctgcgaacaaactca 22611405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 24100602 - 24100565
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  24100602 acaaaaataaatgatattcattcattcaaattgataga 24100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 24826108 - 24826071
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  24826108 acaaaaataaacgatattcattcattcaaattgataga 24826071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 28857668 - 28857623
Alignment:
Q  293 atcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  28857668 atcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 28857623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 38435046 - 38435009
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  38435046 acaaaaataaacgatattcattcattcaaattgataga 38435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 42198022 - 42197985
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  42198022 acaaaaataaacgatattcattcattcaaattgataga 42197985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 43244033 - 43244070
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  43244033 acaaaaataaacgatattcattcattcaaattgataga 43244070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 44374941 - 44374978
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  44374941 acaaaaataaatgatattcattcattcaaattgataga 44374978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 45350722 - 45350759
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  45350722 acaaaaataaacgatattcattcattcaaattgataga 45350759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 45360201 - 45360238
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  45360201 acaaaaataaacgatattcattcattcaaattgataga 45360238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 55600198 - 55600235
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  55600198 acaaaaataaacgatattcattcattcaaattgataga 55600235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 56236483 - 56236520
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  56236483 acaaaaataaatgatattcattcattcaaattgataga 56236520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 14542181 - 14542217
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgatagaat 276  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  14542181 aaaataaaagatattcattcattcaaattgatagaat 14542217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 37465788 - 37465723
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaac 310  Q
    |||||||||||||| |||||||||||    |||||| ||||||| |||||||| |||| |||||||    
T  37465788 gatattcattcatttaaattgatagaatacatcagatacaataacatgatcaacatcgttaaaaac 37465723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 52060719 - 52060810
Alignment:
Q  249 gatattcattcattcaaattgatagaat--cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||||||||| ||||||||||| || ||  |||| ||||||| ||| |||| | | ||||||| ||| |  |||||||||||||||||||||    
T  52060719 gatattcatttattcaaattgagagtataacagatacaataacatgttcaacaacactaaaaatgtaaaatgtgaatctgcaaacaaactca 52060810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 14211533 - 14211428
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| |||||||||||||||||||||||||||| |||    || ||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  14211533 acaaaaataaaggatattcattcattcaaattgatataatacatcatagacaatagcatgatcaatatcgctaaaaacgtatagggtgaatctgcgaaca 14211434  T
Q  333 aactca 338  Q
    ||||||    
T  14211433 aactca 14211428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 28540688 - 28540793
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| |||||||||||||||||| ||||||||| |||    || ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28540688 acaaaaagaaaggatattcattcatttaaattgataaaatacatcaaagacaataacatgatcaatatcgctaaaaacgtatagggtgaatctgcgaaca 28540787  T
Q  333 aactca 338  Q
    ||||||    
T  28540788 aactca 28540793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 2979088 - 2979193
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||| ||| |||||||||| |||||||||||||||||    |||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  2979088 acaaaaataaaagatattcatttattcaaattgatagaatacatcagaaacaataacatgatcaatatcgctaaaaatgtatagggtgaatctgcgaaca 2979187  T
Q  333 aactca 338  Q
    ||||||    
T  2979188 aactca 2979193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 19103262 - 19103354
Alignment:
Q  250 atattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||| |||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19103262 atatttattcattcaaattgatagaatacatcagagacaataacatgatcaatatcgctaaaaacgtataggatgaatctgcgaacaaactca 19103354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 39567576 - 39567471
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaaca 332  Q
    ||||||||||||| |||||||||||||||||||||| |||    || ||||||||| |||||||||||| ||||||||||||| ||||||||| | ||||    
T  39567576 acaaaaacaaagggtattcattcattcaaattgatataatacatcaaagacaataacatgatcaatatcactaaaaacgtatatggtgaatctacgaaca 39567477  T
Q  333 aactca 338  Q
    ||||||    
T  39567476 aactca 39567471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 35920790 - 35920879
Alignment:
Q  249 gatattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaa 334  Q
    |||||||||||| ||||||||||| |||    |||| ||||| | ||||||||| ||||||||||| || || |||||||||||||||||    
T  35920790 gatattcattcaatcaaattgatataatacatcagatacaatcacatgatcaatgtcgctaaaaacataaagtgtgaatctgcaaacaaa 35920879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 13007469 - 13007430
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13007469 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 13007430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 338
Target Start/End: Complemental strand, 19121205 - 19121113
Alignment:
Q  250 atattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||||||||||| |    |||||| ||||||| |||  ||| ||| || |||||||| ||||||||||||| ||||||||||    
T  19121205 atattcattcattcaaattgataaactacatcagatacaataacatgtccaacatctctgaaaacgtaaagggtgaatctgcgaacaaactca 19121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 25980397 - 25980358
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  25980397 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 25980358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 11768255 - 11768211
Alignment:
Q  294 tcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  11768255 tcaacatcgctaaaaacgtataggatgaatctgcgaacaaactca 11768211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 9113573 - 9113612
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  9113573 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 9113612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 34945633 - 34945594
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  34945633 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 34945594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 15710991 - 15710953
Alignment:
Q  238 caaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  15710991 caaaaataaatgatattcattcattcaaattgatagaat 15710953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 17325333 - 17325367
Alignment:
Q  240 aaaacaaaggatattcattcattcaaattgataga 274  Q
    |||||||| ||||||||||||||||||||||||||    
T  17325333 aaaacaaacgatattcattcattcaaattgataga 17325367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 4726669 - 4726706
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4726669 acaaaaataaatgatattcattcattcaaattgataga 4726706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 5378750 - 5378713
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  5378750 acaaaaataaatgatattcattcattcaaattgataga 5378713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 9196683 - 9196720
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  9196683 acaaaaataaacgatattcattcattcaaattgataga 9196720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 17331797 - 17331760
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  17331797 acaaaaataaacgatattcattcattcaaattgataga 17331760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 23881768 - 23881805
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  23881768 acaaaaataaacgatattcattcattcaaattgataga 23881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 24874783 - 24874742
Alignment:
Q  285 ataatatgatcaatatcgctaaaaacgtatagggtgaatctg 326  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||    
T  24874783 ataatatgatcaatatccctaaaaacgtaaaggatgaatctg 24874742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 34431533 - 34431496
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  34431533 acaaaaataaacgatattcattcattcaaattgataga 34431496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 39531060 - 39531097
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  39531060 acaaaaataaacgatattcattcattcaaattgataga 39531097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 40775209 - 40775172
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  40775209 acaaaaataaatgatattcattcattcaaattgataga 40775172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Original strand, 42396164 - 42396201
Alignment:
Q  239 aaaaacaaaggatattcattcattcaaattgatagaat 276  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  42396164 aaaaataaacgatattcattcattcaaattgatagaat 42396201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 42505065 - 42505102
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  42505065 acaaaaataaacgatattcattcattcaaattgataga 42505102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 8088005 - 8088045
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  8088005 acaaaaacaaaatgatattcattcattcaaattgatagaat 8088045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 8984781 - 8984821
Alignment:
Q  237 acaaaaacaaag-gatattcattcattcaaattgatagaat 276  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  8984781 acaaaaacaaaacgatattcattcattcaaattgatagaat 8984821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 1585 - 1546
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1585 atcgctaaaaacgtaaagggtgaatctgcaaacaaactca 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 4440 - 4373
Alignment:
Q  250 atattcattcattcaaattgatagaat----cagagacaataatatgatcaatatcgctaaaaacgta 313  Q
    ||||||||||||||||||||||| |||    |||| ||||||| || |||||||||||||||||||||    
T  4440 atattcattcattcaaattgataaaatacatcagatacaataacatcatcaatatcgctaaaaacgta 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 1821 - 1860
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  1821 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 9890 - 9929
Alignment:
Q  299 atcgctaaaaacgtatagggtgaatctgcaaacaaactca 338  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  9890 atcgctaaaaacgtaaagggtgaatctgcgaacaaactca 9929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 3839 - 3931
Alignment:
Q  249 gatattcattcattcaaattgataga----atcagagacaataatatgatcaatatcgctaaaaacgtatagggtgaatctgcaaacaaactc 337  Q
    ||||||||||||||||||||||||||    ||| || |||||||  ||||| | ||||||||||| ||| ||||| ||||||| | |||||||    
T  3839 gatattcattcattcaaattgatagagttcatctgatacaataaagtgatcgacatcgctaaaaatgtaaagggtaaatctgcgatcaaactc 3931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 3364 - 3327
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  3364 acaaaaataaacgatattcattcattcaaattgataga 3327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 35544 - 35507
Alignment:
Q  237 acaaaaacaaaggatattcattcattcaaattgataga 274  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  35544 acaaaaataaacgatattcattcattcaaattgataga 35507  T

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