View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5071_low_36 (Length: 238)
Name: NF5071_low_36
Description: NF5071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5071_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 32274025 - 32273807
Alignment:
| Q |
4 |
cgtagcctacaatacattacgatggtagaaaactagaattacgtaaaacaacaacactttaataacaacgatgattccatttgtttcaagaacattatca |
103 |
Q |
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| T |
32274025 |
cgtagcctacaatacattacgatggtagaaaactagaattacgtaaaacaacagcactttaataacaacgatgattccatttgtttcaagaacattatca |
32273926 |
T |
|
| Q |
104 |
tcatcgacaacaattaacaaatgcatacgcatgcactcaacaacaacaacgaaaaatacagaatggaccaaaaccgcgagccttagaagcatgttcggca |
203 |
Q |
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| T |
32273925 |
tcatctacaacaattaacaaatgcatacgcatgcactcaacaacaacaacgaaaactacagaatggaccaaaaccgcgaacctaagaagcatgttcggca |
32273826 |
T |
|
| Q |
204 |
aatatgtcgacaaaacaag |
222 |
Q |
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||||||||||||||||||| |
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| T |
32273825 |
aatatgtcgacaaaacaag |
32273807 |
T |
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