View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5072-Insertion-4 (Length: 113)
Name: NF5072-Insertion-4
Description: NF5072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5072-Insertion-4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 106; Significance: 2e-53; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 43780954 - 43780849
Alignment:
| Q |
8 |
gctagtaagtcactactttgtttccaccgccaaaggtttgacccattgaacaatgagaagatgtttgatatttcatattgagaagcagattagaagttca |
107 |
Q |
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| T |
43780954 |
gctagtaagtcactactttgtttccaccgccaaaggtttgacccattgaacaatgagaagatgtttgatatttcatattgagaagcagattagaagttca |
43780855 |
T |
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| Q |
108 |
ccacta |
113 |
Q |
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|||||| |
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| T |
43780854 |
ccacta |
43780849 |
T |
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