View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5072_low_15 (Length: 242)

Name: NF5072_low_15
Description: NF5072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5072_low_15
NF5072_low_15
[»] chr4 (53 HSPs)
chr4 (16-227)||(20977462-20977673)
chr4 (16-227)||(27188533-27188744)
chr4 (3-158)||(17700680-17700835)
chr4 (1-214)||(3499530-3499745)
chr4 (1-227)||(17398551-17398780)
chr4 (16-227)||(3105304-3105525)
chr4 (1-227)||(6517490-6517729)
chr4 (71-227)||(22190851-22191008)
chr4 (132-211)||(15475154-15475233)
chr4 (143-222)||(16940026-16940105)
chr4 (31-227)||(40860672-40860870)
chr4 (1-227)||(10692856-10693095)
chr4 (1-227)||(10906622-10906861)
chr4 (132-227)||(9751551-9751646)
chr4 (131-227)||(38513883-38513979)
chr4 (150-227)||(25651133-25651210)
chr4 (147-227)||(16853508-16853588)
chr4 (150-225)||(37435564-37435639)
chr4 (147-226)||(55380296-55380375)
chr4 (150-227)||(8105642-8105720)
chr4 (132-214)||(39419746-39419827)
chr4 (1-227)||(413007-413246)
chr4 (150-223)||(19884711-19884784)
chr4 (154-227)||(29121375-29121448)
chr4 (150-227)||(54679935-54680012)
chr4 (150-226)||(9140918-9140994)
chr4 (150-226)||(12601107-12601183)
chr4 (150-226)||(37985641-37985717)
chr4 (3-59)||(56034760-56034816)
chr4 (147-226)||(3395596-3395675)
chr4 (150-227)||(45833399-45833476)
chr4 (147-227)||(14604933-14605013)
chr4 (147-223)||(19621087-19621163)
chr4 (1-94)||(14571172-14571268)
chr4 (173-227)||(56533114-56533168)
chr4 (146-227)||(1672394-1672475)
chr4 (146-227)||(1674869-1674950)
chr4 (173-226)||(40846105-40846158)
chr4 (150-214)||(3483739-3483803)
chr4 (1-57)||(17247446-17247502)
chr4 (147-226)||(19911906-19911986)
chr4 (150-226)||(22675549-22675625)
chr4 (192-227)||(8685514-8685549)
chr4 (150-225)||(10072942-10073017)
chr4 (147-226)||(29680570-29680649)
chr4 (173-227)||(6641689-6641743)
chr4 (192-226)||(12811246-12811280)
chr4 (1-83)||(17247402-17247487)
chr4 (192-226)||(19666378-19666412)
chr4 (31-84)||(54680086-54680140)
chr4 (150-214)||(13576143-13576207)
chr4 (192-228)||(17788118-17788154)
chr4 (1-41)||(37435373-37435413)
[»] chr1 (56 HSPs)
chr1 (1-227)||(19215622-19215848)
chr1 (16-227)||(23024798-23025009)
chr1 (1-227)||(34255359-34255586)
chr1 (31-227)||(46088999-46089197)
chr1 (31-227)||(10250996-10251193)
chr1 (31-227)||(21702824-21703030)
chr1 (31-227)||(48570095-48570301)
chr1 (1-223)||(42284642-42284867)
chr1 (106-227)||(21204871-21204993)
chr1 (137-227)||(21984606-21984696)
chr1 (31-227)||(30572207-30572413)
chr1 (132-227)||(21121039-21121134)
chr1 (132-227)||(21135135-21135230)
chr1 (48-227)||(25448446-25448636)
chr1 (132-227)||(37642258-37642353)
chr1 (147-227)||(35040176-35040256)
chr1 (157-227)||(44821545-44821615)
chr1 (150-227)||(22600175-22600252)
chr1 (148-227)||(36134200-36134279)
chr1 (150-227)||(2327432-2327510)
chr1 (150-227)||(14263444-14263521)
chr1 (1-57)||(12284648-12284704)
chr1 (1-57)||(17024796-17024852)
chr1 (151-227)||(39200986-39201062)
chr1 (150-225)||(32785930-32786005)
chr1 (150-227)||(7745083-7745160)
chr1 (147-223)||(12284437-12284513)
chr1 (147-226)||(20954463-20954542)
chr1 (150-225)||(35401821-35401896)
chr1 (150-228)||(22464802-22464880)
chr1 (150-227)||(1900355-1900432)
chr1 (150-227)||(2268541-2268618)
chr1 (150-227)||(2834700-2834777)
chr1 (173-226)||(22201752-22201805)
chr1 (150-227)||(38282577-38282653)
chr1 (1-94)||(44821376-44821472)
chr1 (1-41)||(2327240-2327280)
chr1 (147-227)||(22153867-22153947)
chr1 (174-226)||(28492421-28492473)
chr1 (150-226)||(33256344-33256420)
chr1 (150-226)||(33276516-33276592)
chr1 (147-226)||(1577878-1577957)
chr1 (150-225)||(2267101-2267176)
chr1 (1-84)||(2327270-2327356)
chr1 (147-226)||(10757432-10757511)
chr1 (12-59)||(12284614-12284661)
chr1 (150-225)||(22427350-22427425)
chr1 (174-225)||(30893104-30893155)
chr1 (1-83)||(39200823-39200908)
chr1 (16-57)||(21029003-21029044)
chr1 (150-227)||(21191858-21191935)
chr1 (150-227)||(29215807-29215884)
chr1 (31-94)||(7744953-7745017)
chr1 (147-227)||(12613804-12613884)
chr1 (1-57)||(17371234-17371290)
chr1 (1-33)||(46089212-46089244)
[»] chr3 (58 HSPs)
chr3 (16-227)||(9699974-9700185)
chr3 (31-227)||(1727967-1728164)
chr3 (1-227)||(37412615-37412840)
chr3 (31-227)||(21605605-21605803)
chr3 (1-225)||(46796287-46796514)
chr3 (65-227)||(21636656-21636819)
chr3 (31-214)||(40850991-40851176)
chr3 (31-228)||(21640876-21641083)
chr3 (66-227)||(30054204-30054366)
chr3 (31-227)||(49666357-49666554)
chr3 (1-227)||(5213587-5213822)
chr3 (31-227)||(2785074-2785282)
chr3 (150-227)||(14955437-14955514)
chr3 (150-227)||(11223573-11223650)
chr3 (141-227)||(22140774-22140859)
chr3 (150-227)||(29855419-29855496)
chr3 (150-227)||(53056799-53056876)
chr3 (150-225)||(20627503-20627578)
chr3 (150-228)||(33583238-33583317)
chr3 (150-223)||(14969341-14969414)
chr3 (150-227)||(24775606-24775683)
chr3 (150-227)||(47207716-47207793)
chr3 (147-226)||(12963154-12963233)
chr3 (147-226)||(20646165-20646244)
chr3 (1-59)||(12962995-12963053)
chr3 (147-225)||(14393073-14393151)
chr3 (147-225)||(16658687-16658765)
chr3 (150-228)||(38177715-38177793)
chr3 (1-57)||(18121515-18121571)
chr3 (150-226)||(28582117-28582193)
chr3 (150-226)||(41495010-41495086)
chr3 (168-227)||(11868279-11868338)
chr3 (150-225)||(11909096-11909171)
chr3 (152-227)||(40799884-40799959)
chr3 (150-224)||(37467346-37467420)
chr3 (150-228)||(49553561-49553639)
chr3 (150-227)||(18121694-18121771)
chr3 (150-227)||(18142824-18142901)
chr3 (173-214)||(50300246-50300287)
chr3 (150-214)||(13824092-13824156)
chr3 (150-226)||(13948347-13948423)
chr3 (1-57)||(21636574-21636630)
chr3 (152-227)||(2561198-2561273)
chr3 (174-225)||(17239018-17239069)
chr3 (1-43)||(14955649-14955691)
chr3 (150-204)||(45858821-45858875)
chr3 (173-226)||(13780679-13780732)
chr3 (150-227)||(16032535-16032612)
chr3 (1-42)||(19888854-19888895)
chr3 (173-226)||(22804118-22804171)
chr3 (173-226)||(31303397-31303450)
chr3 (173-226)||(49642857-49642910)
chr3 (147-227)||(12726299-12726379)
chr3 (195-227)||(12968316-12968348)
chr3 (1-41)||(14955666-14955706)
chr3 (192-224)||(23538280-23538312)
chr3 (1-57)||(28582316-28582372)
chr3 (1-57)||(46349739-46349795)
[»] chr6 (41 HSPs)
chr6 (7-225)||(17316443-17316661)
chr6 (1-227)||(19482763-19482989)
chr6 (1-227)||(19065926-19066156)
chr6 (35-227)||(12349004-12349206)
chr6 (1-227)||(22076306-22076545)
chr6 (1-227)||(21618255-21618494)
chr6 (31-227)||(16336138-16336345)
chr6 (150-227)||(12423272-12423349)
chr6 (143-227)||(33351981-33352064)
chr6 (152-227)||(16877224-16877299)
chr6 (108-226)||(19086170-19086288)
chr6 (31-227)||(19832963-19833171)
chr6 (150-227)||(20487979-20488056)
chr6 (147-226)||(24116840-24116919)
chr6 (150-227)||(15954714-15954791)
chr6 (150-227)||(32544276-32544353)
chr6 (150-228)||(22802151-22802229)
chr6 (150-227)||(9717854-9717931)
chr6 (150-227)||(15531685-15531762)
chr6 (147-226)||(20112758-20112837)
chr6 (150-225)||(21625114-21625189)
chr6 (156-227)||(29918028-29918099)
chr6 (1-59)||(29918208-29918266)
chr6 (150-227)||(14100501-14100578)
chr6 (150-227)||(16265211-16265288)
chr6 (150-227)||(21235136-21235213)
chr6 (150-226)||(15302212-15302288)
chr6 (150-226)||(15987245-15987321)
chr6 (147-226)||(12715478-12715557)
chr6 (168-223)||(17381536-17381591)
chr6 (132-227)||(26589610-26589708)
chr6 (174-228)||(13435542-13435596)
chr6 (33-94)||(15954857-15954919)
chr6 (1-31)||(17381649-17381679)
chr6 (192-226)||(18378326-18378360)
chr6 (192-226)||(19623991-19624025)
chr6 (150-227)||(20730765-20730842)
chr6 (150-214)||(18435580-18435644)
chr6 (150-214)||(19688790-19688854)
chr6 (150-226)||(23284576-23284652)
chr6 (1-41)||(26589833-26589873)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-227)||(735-963)
[»] chr5 (47 HSPs)
chr5 (1-227)||(23391505-23391733)
chr5 (31-227)||(28464272-28464469)
chr5 (31-227)||(10848780-10848978)
chr5 (31-227)||(9088976-9089173)
chr5 (31-227)||(25930088-25930286)
chr5 (31-227)||(3245365-3245571)
chr5 (106-227)||(35932014-35932136)
chr5 (150-227)||(29138459-29138536)
chr5 (1-227)||(35986132-35986362)
chr5 (150-227)||(30115890-30115967)
chr5 (31-227)||(15516976-15517183)
chr5 (31-228)||(26759155-26759363)
chr5 (151-227)||(28139614-28139690)
chr5 (138-227)||(21660219-21660308)
chr5 (150-227)||(30742987-30743064)
chr5 (1-227)||(14086428-14086669)
chr5 (150-227)||(33933274-33933352)
chr5 (150-227)||(4887029-4887106)
chr5 (150-227)||(26765505-26765582)
chr5 (31-227)||(42243687-42243895)
chr5 (147-227)||(11993895-11993975)
chr5 (150-226)||(7745746-7745822)
chr5 (147-226)||(21072290-21072369)
chr5 (147-226)||(23413024-23413103)
chr5 (147-225)||(19536351-19536429)
chr5 (1-59)||(23412865-23412923)
chr5 (150-227)||(32160773-32160850)
chr5 (150-226)||(21910564-21910640)
chr5 (173-225)||(23881076-23881128)
chr5 (154-226)||(26784362-26784434)
chr5 (150-226)||(41566487-41566563)
chr5 (147-226)||(89472-89551)
chr5 (150-225)||(33022673-33022748)
chr5 (173-227)||(642783-642837)
chr5 (1-59)||(6512322-6512380)
chr5 (150-228)||(13545565-13545643)
chr5 (173-226)||(6499247-6499300)
chr5 (173-226)||(6512504-6512557)
chr5 (173-226)||(12352871-12352924)
chr5 (147-226)||(17814976-17815055)
chr5 (1-56)||(32160973-32161028)
chr5 (1-43)||(29138284-29138326)
chr5 (31-88)||(30115799-30115857)
chr5 (1-78)||(31118044-31118122)
chr5 (173-226)||(9398810-9398863)
chr5 (1-59)||(26784542-26784602)
chr5 (16-57)||(41566323-41566364)
[»] chr2 (57 HSPs)
chr2 (23-227)||(22776178-22776383)
chr2 (23-227)||(22781556-22781761)
chr2 (31-227)||(31967941-31968138)
chr2 (1-227)||(44840439-44840665)
chr2 (1-227)||(1586898-1587128)
chr2 (31-227)||(28550816-28551013)
chr2 (31-227)||(40332092-40332290)
chr2 (31-227)||(22785553-22785750)
chr2 (65-225)||(3277037-3277198)
chr2 (76-227)||(14581520-14581671)
chr2 (1-228)||(34321792-34322032)
chr2 (1-214)||(23392534-23392750)
chr2 (1-227)||(22802465-22802702)
chr2 (151-228)||(30557339-30557417)
chr2 (150-227)||(28711716-28711793)
chr2 (1-227)||(33074231-33074470)
chr2 (147-227)||(31800902-31800982)
chr2 (150-226)||(35744018-35744094)
chr2 (152-226)||(19540422-19540496)
chr2 (149-226)||(24377107-24377184)
chr2 (147-227)||(31327981-31328061)
chr2 (147-227)||(31334702-31334782)
chr2 (1-44)||(22785506-22785549)
chr2 (150-227)||(6392638-6392716)
chr2 (150-226)||(13963996-13964072)
chr2 (150-226)||(18376924-18377000)
chr2 (150-214)||(20152053-20152117)
chr2 (150-226)||(23235013-23235089)
chr2 (150-226)||(25829140-25829216)
chr2 (150-214)||(45087202-45087266)
chr2 (147-226)||(10009765-10009844)
chr2 (16-59)||(23184184-23184227)
chr2 (16-59)||(23595441-23595484)
chr2 (150-225)||(28701247-28701322)
chr2 (147-217)||(40782492-40782562)
chr2 (173-226)||(21537289-21537342)
chr2 (150-223)||(22317602-22317675)
chr2 (173-226)||(30666995-30667048)
chr2 (147-226)||(9015385-9015462)
chr2 (150-226)||(20568768-20568844)
chr2 (1-41)||(30557145-30557185)
chr2 (192-227)||(19115088-19115123)
chr2 (192-227)||(26619161-26619196)
chr2 (192-227)||(44881172-44881207)
chr2 (150-227)||(6574141-6574219)
chr2 (192-226)||(22188162-22188196)
chr2 (150-228)||(38781403-38781481)
chr2 (31-94)||(1084155-1084220)
chr2 (173-226)||(30621222-30621275)
chr2 (173-226)||(30623843-30623896)
chr2 (173-226)||(39037683-39037736)
chr2 (1-57)||(22317799-22317855)
chr2 (174-226)||(25037301-25037353)
chr2 (174-226)||(25041408-25041460)
chr2 (142-226)||(28140630-28140713)
chr2 (1-77)||(30557175-30557254)
chr2 (1-57)||(35743843-35743899)
[»] scaffold0207 (2 HSPs)
scaffold0207 (31-214)||(10744-10928)
scaffold0207 (31-214)||(20645-20829)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-227)||(1626-1855)
scaffold1359 (16-227)||(533-755)
[»] chr7 (62 HSPs)
chr7 (1-227)||(14425454-14425683)
chr7 (4-227)||(19339174-19339401)
chr7 (1-227)||(27871725-27871956)
chr7 (31-227)||(48062773-48062971)
chr7 (76-227)||(1293037-1293188)
chr7 (66-227)||(24794703-24794866)
chr7 (31-211)||(32264670-32264853)
chr7 (31-227)||(4411915-4412113)
chr7 (31-227)||(21381381-21381580)
chr7 (16-227)||(14426554-14426776)
chr7 (1-227)||(4821481-4821719)
chr7 (156-227)||(8182937-8183008)
chr7 (132-227)||(48805935-48806030)
chr7 (157-227)||(2265600-2265670)
chr7 (147-225)||(29935429-29935507)
chr7 (150-227)||(16111958-16112035)
chr7 (150-227)||(19711087-19711164)
chr7 (150-227)||(23280032-23280109)
chr7 (150-225)||(30945430-30945505)
chr7 (150-225)||(33605694-33605769)
chr7 (150-214)||(12174414-12174479)
chr7 (150-227)||(30944397-30944474)
chr7 (150-227)||(35952762-35952839)
chr7 (33-197)||(15704445-15704620)
chr7 (150-226)||(16309981-16310057)
chr7 (173-226)||(13648737-13648790)
chr7 (150-227)||(21283447-21283524)
chr7 (150-227)||(28409046-28409123)
chr7 (1-59)||(39284475-39284535)
chr7 (156-225)||(48236982-48237051)
chr7 (150-226)||(2913682-2913758)
chr7 (150-226)||(9069570-9069646)
chr7 (150-226)||(13880112-13880188)
chr7 (147-226)||(5000893-5000972)
chr7 (151-226)||(15088528-15088603)
chr7 (151-226)||(16316632-16316707)
chr7 (1-83)||(28622268-28622353)
chr7 (1-83)||(48236814-48236899)
chr7 (173-226)||(13018602-13018655)
chr7 (147-224)||(13260686-13260763)
chr7 (150-227)||(15467923-15468000)
chr7 (150-227)||(19237117-19237194)
chr7 (150-227)||(44467071-44467148)
chr7 (1-57)||(4428984-4429040)
chr7 (150-226)||(13137969-13138045)
chr7 (150-226)||(13730749-13730825)
chr7 (156-227)||(33691792-33691863)
chr7 (175-226)||(41842372-41842423)
chr7 (150-224)||(331655-331728)
chr7 (147-217)||(11792924-11792994)
chr7 (1-84)||(12174252-12174337)
chr7 (173-227)||(22578118-22578172)
chr7 (31-94)||(19710955-19711020)
chr7 (150-227)||(24788148-24788225)
chr7 (16-76)||(30945285-30945346)
chr7 (173-226)||(39284661-39284714)
chr7 (1-42)||(48805785-48805826)
chr7 (151-227)||(602772-602847)
chr7 (1-57)||(8183134-8183190)
chr7 (1-57)||(9069769-9069825)
chr7 (150-214)||(9709876-9709940)
chr7 (150-226)||(21692295-21692371)
[»] chr8 (58 HSPs)
chr8 (31-227)||(6407729-6407926)
chr8 (1-227)||(14989369-14989599)
chr8 (31-227)||(43639786-43639984)
chr8 (1-227)||(13430545-13430776)
chr8 (1-227)||(21301025-21301255)
chr8 (108-227)||(18151674-18151794)
chr8 (108-214)||(21288419-21288526)
chr8 (1-225)||(22673783-22674020)
chr8 (1-227)||(15335997-15336236)
chr8 (1-227)||(15425062-15425301)
chr8 (1-227)||(15516366-15516605)
chr8 (1-228)||(22663118-22663358)
chr8 (1-227)||(40845297-40845535)
chr8 (1-227)||(36105198-36105437)
chr8 (132-214)||(33560277-33560359)
chr8 (150-225)||(24551279-24551354)
chr8 (150-227)||(16207309-16207386)
chr8 (150-226)||(16188988-16189064)
chr8 (150-228)||(24833127-24833206)
chr8 (150-227)||(17797425-17797502)
chr8 (150-227)||(23185297-23185374)
chr8 (151-227)||(45538511-45538587)
chr8 (147-226)||(602788-602867)
chr8 (147-226)||(18679819-18679898)
chr8 (147-226)||(18719005-18719084)
chr8 (147-226)||(39693539-39693618)
chr8 (150-227)||(9320571-9320649)
chr8 (148-226)||(17441876-17441954)
chr8 (132-227)||(1745162-1745258)
chr8 (150-226)||(12757834-12757910)
chr8 (1-57)||(22673979-22674035)
chr8 (150-226)||(24646342-24646418)
chr8 (147-226)||(17525797-17525876)
chr8 (173-223)||(20382488-20382538)
chr8 (150-224)||(23263683-23263757)
chr8 (150-227)||(1237640-1237717)
chr8 (150-227)||(45567972-45568049)
chr8 (173-217)||(16681397-16681441)
chr8 (1-57)||(17797623-17797679)
chr8 (150-226)||(19156200-19156276)
chr8 (1-84)||(9320726-9320812)
chr8 (147-226)||(17267478-17267557)
chr8 (192-227)||(18685510-18685545)
chr8 (192-227)||(18722759-18722794)
chr8 (192-227)||(18731104-18731139)
chr8 (1-76)||(23185135-23185213)
chr8 (1-83)||(17797579-17797664)
chr8 (1-59)||(18679999-18680057)
chr8 (192-226)||(25164074-25164108)
chr8 (180-214)||(45292842-45292876)
chr8 (173-226)||(17914463-17914516)
chr8 (31-83)||(30421369-30421422)
chr8 (150-226)||(18321230-18321306)
chr8 (150-226)||(21932887-21932963)
chr8 (1-57)||(21933086-21933142)
chr8 (150-214)||(33082873-33082937)
chr8 (1-41)||(36105427-36105467)
chr8 (1-57)||(39693738-39693793)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-227)||(17636-17865)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-227)||(25535-25765)
scaffold0056 (1-227)||(34674-34904)
scaffold0056 (192-224)||(36249-36281)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-227)||(87472-87700)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-227)||(2573-2791)
[»] scaffold0414 (1 HSPs)
scaffold0414 (3-227)||(7019-7256)
[»] scaffold0352 (1 HSPs)
scaffold0352 (30-227)||(722-921)
[»] scaffold0217 (4 HSPs)
scaffold0217 (1-227)||(9571-9809)
scaffold0217 (150-227)||(22154-22231)
scaffold0217 (1-57)||(21977-22033)
scaffold0217 (1-41)||(21962-22002)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-227)||(215358-215597)
[»] scaffold0015 (1 HSPs)
scaffold0015 (31-227)||(60814-61021)
[»] scaffold0527 (2 HSPs)
scaffold0527 (31-207)||(7963-8149)
scaffold0527 (31-94)||(22-86)
[»] scaffold0176 (2 HSPs)
scaffold0176 (150-225)||(9168-9243)
scaffold0176 (31-94)||(9308-9372)
[»] scaffold0004 (2 HSPs)
scaffold0004 (4-227)||(211409-211643)
scaffold0004 (150-226)||(377582-377658)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-227)||(3315-3554)
scaffold0471 (1-41)||(3544-3584)
[»] scaffold0280 (1 HSPs)
scaffold0280 (147-227)||(2750-2830)
[»] scaffold0387 (1 HSPs)
scaffold0387 (132-227)||(7392-7487)
[»] scaffold0035 (3 HSPs)
scaffold0035 (1-227)||(99069-99305)
scaffold0035 (146-226)||(19491-19571)
scaffold0035 (1-41)||(99039-99079)
[»] scaffold0439 (2 HSPs)
scaffold0439 (1-228)||(6601-6841)
scaffold0439 (1-41)||(6571-6611)
[»] scaffold0247 (2 HSPs)
scaffold0247 (150-227)||(25422-25499)
scaffold0247 (31-94)||(23456-23520)
[»] scaffold0043 (1 HSPs)
scaffold0043 (150-225)||(78389-78464)
[»] scaffold0411 (1 HSPs)
scaffold0411 (147-226)||(12221-12300)
[»] scaffold0069 (1 HSPs)
scaffold0069 (31-227)||(5226-5425)
[»] scaffold1331 (1 HSPs)
scaffold1331 (37-227)||(1598-1799)
[»] scaffold0116 (1 HSPs)
scaffold0116 (150-227)||(20994-21071)
[»] scaffold0084 (3 HSPs)
scaffold0084 (150-227)||(368-445)
scaffold0084 (173-226)||(32497-32550)
scaffold0084 (150-226)||(49344-49420)
[»] scaffold0011 (3 HSPs)
scaffold0011 (150-227)||(164969-165046)
scaffold0011 (1-94)||(65290-65386)
scaffold0011 (1-94)||(144335-144431)
[»] scaffold0211 (1 HSPs)
scaffold0211 (150-227)||(15645-15722)
[»] scaffold0171 (2 HSPs)
scaffold0171 (150-227)||(27452-27529)
scaffold0171 (1-59)||(27290-27348)
[»] scaffold0132 (1 HSPs)
scaffold0132 (150-227)||(38108-38185)
[»] scaffold0026 (2 HSPs)
scaffold0026 (151-224)||(7940-8013)
scaffold0026 (151-217)||(60037-60103)
[»] scaffold0251 (1 HSPs)
scaffold0251 (150-226)||(7715-7791)
[»] scaffold0005 (2 HSPs)
scaffold0005 (147-227)||(212365-212445)
scaffold0005 (1-94)||(246108-246204)
[»] scaffold0220 (1 HSPs)
scaffold0220 (150-225)||(1820-1895)
[»] scaffold0028 (1 HSPs)
scaffold0028 (150-225)||(5625-5700)
[»] scaffold0023 (1 HSPs)
scaffold0023 (150-225)||(103585-103660)
[»] scaffold0426 (2 HSPs)
scaffold0426 (1-59)||(13818-13876)
scaffold0426 (173-226)||(13583-13636)
[»] scaffold0227 (1 HSPs)
scaffold0227 (150-227)||(22687-22764)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-42)||(11585-11626)
[»] scaffold0771 (1 HSPs)
scaffold0771 (150-226)||(487-563)
[»] scaffold0359 (1 HSPs)
scaffold0359 (150-226)||(5713-5789)
[»] scaffold1747 (1 HSPs)
scaffold1747 (192-227)||(1328-1363)
[»] scaffold1745 (1 HSPs)
scaffold1745 (192-227)||(48-83)
[»] scaffold0146 (1 HSPs)
scaffold0146 (174-225)||(15130-15181)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-76)||(89916-89994)
scaffold0003 (150-227)||(90078-90155)
[»] scaffold0479 (2 HSPs)
scaffold0479 (1-59)||(10161-10219)
scaffold0479 (147-227)||(9980-10060)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-59)||(6198-6256)
[»] scaffold0210 (1 HSPs)
scaffold0210 (147-225)||(1673-1751)
[»] scaffold0530 (1 HSPs)
scaffold0530 (173-222)||(2041-2090)
[»] scaffold0290 (1 HSPs)
scaffold0290 (173-226)||(18667-18720)
[»] scaffold0161 (1 HSPs)
scaffold0161 (150-227)||(10131-10208)
[»] scaffold0064 (1 HSPs)
scaffold0064 (150-227)||(43942-44019)
[»] scaffold0040 (1 HSPs)
scaffold0040 (192-225)||(1586-1619)
[»] scaffold0083 (1 HSPs)
scaffold0083 (150-226)||(25998-26074)
[»] scaffold0065 (1 HSPs)
scaffold0065 (173-225)||(1703-1755)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-33)||(74814-74846)
[»] scaffold0022 (4 HSPs)
scaffold0022 (192-228)||(37412-37448)
scaffold0022 (2-59)||(39617-39676)
scaffold0022 (192-228)||(135472-135508)
scaffold0022 (2-59)||(137677-137736)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 20977673 - 20977462
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcaga 115  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  20977673 tcatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacataaagcttcaaaagttgtttcaaggattcaagctcgccagaaaattgcaga 20977574  T
Q  116 agacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20977573 agacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 20977474  T
Q  216 ctgcactactct 227  Q
    ||||||||||||    
T  20977473 ctgcactactct 20977462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 27188533 - 27188744
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcaga 115  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  27188533 tcatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcgccagaaaattgcaga 27188632  T
Q  116 agacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27188633 agacttggaaagttaacaacgactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactat 27188732  T
Q  216 ctgcactactct 227  Q
    ||||||||||||    
T  27188733 ctgcactactct 27188744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 17700680 - 17700835
Alignment:
Q  3 atcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgct 102  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  17700680 atcagaagcaagttcatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcgcc 17700779  T
Q  103 agaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggat 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17700780 agaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggat 17700835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3499530 - 3499745
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||     
T  3499530 tcatcagaagcaagtttatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacctagagcttcaaaagctgtttcaaggattcaagctca 3499629  T
Q  101 ctagaaa-attgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg 198  Q
    | | ||| ||| ||||||||| |   ||| | ||||||||||  ||||||  |||||||||||  ||| |||| ||||||||||||||| | ||||||||    
T  3499630 ccaaaaagattacagaagactggaggagtatgacaacggctagattgaaatacattggatgctatttcttcaatgagcgttgacatagtacatttgtacg 3499729  T
Q  199 aagtgtacaaccacta 214  Q
    ||||||||||||||||    
T  3499730 aagtgtacaaccacta 3499745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 17398551 - 17398780
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt--tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| |||| |    |||||||||||||  | ||||||| |||| |||| |||||||||||||| |||||||||||||||  |    
T  17398551 tcatcagaagcaagttcatcagaagctatgaatcaccagaagctgcggttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaac 17398650  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||||   |||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  17398651 tcgcct-aaaattgcagaagactggaaaagtatagcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 17398749  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||| || |||||||||    
T  17398750 cgaagtgtacaaccactaactccactactct 17398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 3105304 - 3105525
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcag 114  Q
    |||||||||||||||||| ||||||||| || ||||||| |||| |||| ||||||||||||||||||||||||||||||  |||| |  || |||||||    
T  3105304 tcatcaaaagcaagttcatcagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcg-tctaagattgcag 3105402  T
Q  115 aagacttggaaagt-taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgt 204  Q
    |||||| | ||||| |  |||||||||||||||||         || |||||||| |||||| |||| |||||||||||||||  |||||||||||||||    
T  3105403 aagactggaaaagtattccaacggctattttgaaaggattgaaaagtattggatggttattcttcaaagagcgttgacatagtatgtttgtacgaagtgt 3105502  T
Q  205 acaaccactatctgcactactct 227  Q
    ||||||||||||| |||||||||    
T  3105503 acaaccactatctccactactct 3105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6517729 - 6517490
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||  |   |||||||||| ||||| ||||||| |||| |||| |||||||||||||| | ||| |||||||||  |    
T  6517729 tcatcagaagcaagttcatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttatttaaaggattcaaac 6517630  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||| |||||||| ||         |||||  ||||||||||| |||| ||||||||||||||    
T  6517629 tcgtcta-aagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcatgagatgcttattcttcaaagagcgttgacatag 6517531  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||||||||||||||||||||||| |||||||||    
T  6517530 tacgtttgtacgaagtgtacaaccactatctccactactct 6517490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 22191008 - 22190851
Alignment:
Q  71 ttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctc 169  Q
    |||||||||||||||||||| ||   || |||   ||||||||||||||| | ||||| |  ||||  ||||||||||| |||||||||||| |||| ||    
T  22191008 ttcaaaagctgtttcaaggactctaacttgcttagaaattgcagaagactggaaaagtatggcaacaactattttgaaatgcattggatgctgattcttc 22190909  T
Q  170 aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    || ||||||||||||||| ||||||||||||||||||||||||||  | |||||||||    
T  22190908 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactct 22190851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 15475154 - 15475233
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaacca 211  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  15475154 caacggctattttgaaatgcattggatgcttactcctcaaagagcgttgacatagtacgtttatacgaagtgtacaacca 15475233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 16940105 - 16940026
Alignment:
Q  143 ttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcact 222  Q
    |||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  16940105 ttgaaaggcattgaatgcttattcttcaaggagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 16940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 40860870 - 40860672
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcgc-tagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||  || ||||||| ||||  ||| ||||| |||||||| ||||||||||| |    ||||| |||||| |||||||||||| | |||||    
T  40860870 tcaccagaagctacagttcatcaggagatggaacttaaagtttcaaaagttgtttcaaggactataactcgcctagaaa-ttgcagaagactggaaaagt 40860772  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     |  ||| ||||| ||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||| || ||||||||||||||  | |||||||||    
T  40860771 atggcaatggctaatttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgatgtgtacaaccactacttccactactct 40860672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 10693095 - 10692856
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||| ||||| | |||||||  |    
T  10693095 tcatcagaagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaac 10692996  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||  ||||||||||| |         |||||||||||| ||| |||| ||||||| ||| ||    
T  10692995 tcgtcta-aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaag 10692897  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||| ||||||||||||||||| || |||||||||    
T  10692896 tacgtttgtatgaagtgtacaaccactacctccactactct 10692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 10906861 - 10906622
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||| ||||| | |||||||  |    
T  10906861 tcatcagaagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaac 10906762  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||  ||||||||||| |         |||||||||||| ||| |||| ||||||| ||| ||    
T  10906761 tcgtcta-aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaag 10906663  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||| ||||||||||||||||| || |||||||||    
T  10906662 tacgtttgtatgaagtgtacaaccactacctccactactct 10906622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 9751551 - 9751646
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||||||| |||||||||||| |||| |||| |||||||||||||||  ||||| |||||||||||||||||||  | |||||||||    
T  9751551 caacggctagtttgaaatgcattggatgctaattcttcaaagagcgttgacatagtatgtttgcacgaagtgtacaaccactacttccactactct 9751646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 38513979 - 38513883
Alignment:
Q  131 acaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| ||| ||| |||||||||| | |||| |||| ||||||||||||||| || |||||||||||||||||||||||  | |||||||||    
T  38513979 acaacggctagtttaaaatgcattggatgttaattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactactttcactactct 38513883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 25651133 - 25651210
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||||||| |||| |||||||||| |||| ||||||||| |||||||||||||||| || |||||||||    
T  25651133 gcattgaatgcttattcttcaaagagcgttgacgtagtacgtttgtacaaagtgtacaaccactacctccactactct 25651210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 16853588 - 16853508
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| |||||||| ||||||||||| ||| | | |||| ||||||||||||||||| || |||||||||    
T  16853588 aaagcattggatgcttgttcctcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccactacctccactactct 16853508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 37435564 - 37435639
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| ||||||||||||||| |  ||||||||||||||||||||||| || |||||||    
T  37435564 gcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccactacctccactact 37435639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 55380375 - 55380296
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  55380375 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 55380296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 8105720 - 8105642
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||| ||||||||||||| || |||||||||    
T  8105720 gcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaaatgtacaaccactacctccactactct 8105642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 39419746 - 39419827
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||| |||| || ||||| |||||| |||| ||||  |||||||||||||| ||||||||||||||||||||||||||    
T  39419746 caacggctagtttggaatgcatttgatgctaattcttcaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccacta 39419827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 413246 - 413007
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaaga-tcaacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| ||| ||||| |||||||||||||| ||||  | |||||||  |    
T  413246 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagattcaacttaaagcttcaaaagttgttcaatggattcaatc 413147  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttga---------aaagcattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| |  ||||||||||||| | ||||| || ||||||||| |||||         || |||||| ||| || ||| |||| ||||||||||| ||    
T  413146 tcgtcta-agcattgcagaagactcgaaaagtgaagcaacggctaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagagcgttgacaaag 413048  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | || ||||||||||||||||||||||  || |||||||||    
T  413047 tacgattgtacgaagtgtacaaccactgcctccactactct 413007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 19884784 - 19884711
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||||| |||||    
T  19884784 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacta 19884711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 29121448 - 29121375
Alignment:
Q  154 tggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||| | || ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  29121448 tggatgcttgttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 29121375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 54680012 - 54679935
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| || ||| |||| |||| |||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  54680012 gcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 54679935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 9140994 - 9140918
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  9140994 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatcttcactactc 9140918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 12601183 - 12601107
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  12601183 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 12601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 37985641 - 37985717
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  37985641 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 37985717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 56034816 - 56034760
Alignment:
Q  3 atcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||    
T  56034816 atcagaagcaagttcatcagaagcaagatcaccagaagctgaagttcatcagaagat 56034760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 3395675 - 3395596
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||  ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  3395675 aaagcattggatgctagttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 3395596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 45833476 - 45833399
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  45833476 gcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 45833399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 14604933 - 14605013
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  14604933 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 14605013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 19621087 - 19621163
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    |||||||||||||||| |||    | ||||||||||||||| |  |||||||||||||||||||||||||| |||||    
T  19621087 aaagcattggatgcttgttctatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccacta 19621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14571268 - 14571172
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||||||||||| ||||  ||   |||||||||| || || ||||||| |||| |||| |||||||||||||| |||||||||||||||    
T  14571268 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattca 14571172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 56533114 - 56533168
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| ||| ||||||||||||||||||||||||||  | |||||||||    
T  56533114 gagcgttgacaaagtacgtttgtacgaagtgtacaaccactacttccactactct 56533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 1672475 - 1672394
Alignment:
Q  146 aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||| || |||| | |||| || |||||||| | | |||||||||||||||||||||||||| || |||||||||    
T  1672475 aaaagctttgggtgtttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactct 1672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 1674950 - 1674869
Alignment:
Q  146 aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||| || |||| | |||| || |||||||| | | |||||||||||||||||||||||||| || |||||||||    
T  1674950 aaaagctttgggtgtttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactct 1674869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 40846158 - 40846105
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  40846158 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 40846105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 3483803 - 3483739
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||||||||| |||| ||||||||||| ||| |  |||||||||| | ||||||||||    
T  3483803 gcattggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagcgcacaaccacta 3483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17247502 - 17247446
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| | |||| ||||||    
T  17247502 tcatcagaagcgagttcatcagaagcaagttcatcagaagctgaaaatcaccagaag 17247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 19911906 - 19911986
Alignment:
Q  147 aaagcattggatgcttattcctc-aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||| |  || |||||||||||||||    |||||| |||||||||||||||| || ||||||||    
T  19911906 aaagcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaagtgtacaaccactacctccactactc 19911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 22675549 - 22675625
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||| ||||||| ||| |||| ||||||||||| ||| |  |||||| |||||||||||||||| || ||||||||    
T  22675549 gcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactc 22675625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 8685514 - 8685549
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  8685514 ttgtacgaagtgtacaaccactatctccactactct 8685549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 10073017 - 10072942
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||| |||| ||  |||| ||||||||||| ||| |   ||||||||||||||||||||||||| |||||||    
T  10073017 gcattggaggcttgttattcaaagagcgttgacaaagtacaaatgtacgaagtgtacaaccactatctccactact 10072942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 29680570 - 29680649
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  ||||||||||||||||| || ||||| ||||||||    
T  29680570 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcattatctccactactc 29680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 6641743 - 6641689
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  6641743 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 6641689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 12811246 - 12811280
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  12811246 ttgtacgaagtgtacaaccactatctccactactc 12811280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17247487 - 17247402
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagatcaa-cctaaagcttcaaaagctgtt 83  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| || | |||||||||||||| ||||    
T  17247487 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgaatcttaaagcttcaaaagttgtt 17247402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 19666412 - 19666378
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  19666412 ttgtacgaagtgtacaaccactatctccactactc 19666378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 54680140 - 54680086
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgttt 84  Q
    ||||||||||||| || ||||||| |||| |||| ||||||||||||||||||||    
T  54680140 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgttt 54680086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 13576143 - 13576207
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||| ||||||| ||| |||| ||||||||||||||| |   ||||||||||||| ||||||||    
T  13576143 gcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccacta 13576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 17788118 - 17788154
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  17788118 ttgtacgatgtgtacaaccactatctccactactcta 17788154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37435373 - 37435413
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||| ||||||||||| |||||||    
T  37435373 tcatcagaagcaaggtcatcagaagcaagttcatcagaagc 37435413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19215848 - 19215622
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    ||||||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  19215848 tcatcagaagcaaattcatcagaagcaaattcaccagaagctgcagatcatcagaagatcaatctaaagcttcaaaagctgtttcaaggattcaagctcg 19215749  T
Q  101 ctagaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaa 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  19215748 ccagaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcatttgatgcttattcctcaaggagcgttgacatagtgtgattgtacgaa 19215649  T
Q  201 gtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||||    
T  19215648 gtgtacaaccactatctgcactactct 19215622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 23025009 - 23024798
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcag 114  Q
    |||||| ||||||||||| || |||||| || ||||| ||| || ||||||||||||||||||||||||||||||||| |  ||||| ||||| ||||||    
T  23025009 tcatcagaagcaagttcatcaaaagctgcaggtcatcggaaaatgcaacctaaagcttcaaaagctgtttcaaggatttaatctcgccagaaa-ttgcag 23024911  T
Q  115 aagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23024910 aagacttggaaagttagcaacgactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 23024811  T
Q  215 tctgcactactct 227  Q
    |||||||||||||    
T  23024810 tctgcactactct 23024798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34255359 - 34255586
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||     
T  34255359 tcatcagaagcaagtttatcagaagcaagttcaccagaagctgcagattatcataagatcaacctaaagcttcaaaagctgtttcaaggattcaagctca 34255458  T
Q  101 ctagaaa-attgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacga 199  Q
    | ||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||  ||||||| |||||||||||| ||| || |||||||    
T  34255459 ccagaaagattgcagaagacttggaaagttgacaacgactagtttgaaaagcattggatgctttatcctcaaagagcgttgacattgtgagtatgtacga 34255558  T
Q  200 agtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||  | |||||||||    
T  34255559 actgtacaaccactacttccactactct 34255586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 46089197 - 46088999
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||  |||| |||| ||||||||||||||||||||||||||||||  |||||   |||||||||||||||| | |||||     
T  46089197 tcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgcctaaaaattgcagaagactggaaaagta 46089098  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |  ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  46089097 tggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 46088999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 10251193 - 10250996
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| |||||||||||||| ||||| |||||||||  |||| |  || ||||||||||||| | |||||     
T  10251193 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcg-tctaagattgcagaagactggaaaagta 10251095  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||| |||| || ||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  10251094 taacaacggctaatttggaaggcattggatgcttattcttcaaagagttttgacatagtacgtttgtacgaagtgtacaaccattatctccactactct 10250996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 21703030 - 21702824
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| |||||||||||||  |||||||||||||||  |||| |  || ||||||||||||||| |||||     
T  21703030 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaatttgtttcaaggattcaaactcg-tctaagattgcagaagacttgaaaagta 21702932  T
Q  129 taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    || ||||||||||||||||| |         ||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  21702931 tagcaacggctattttgaaaggattgaagggcattgaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 21702832  T
Q  220 actactct 227  Q
    ||||||||    
T  21702831 actactct 21702824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 48570095 - 48570301
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    |||||||||||||||  ||||||| |||| |||| ||||| |||||||||||||| | |||||||  |||| |  || ||||||||||||| | |||||     
T  48570095 tcaccagaagctgtaattcatcaggagatgcaacttaaagtttcaaaagctgtttaacggattcaaactcg-tctaagattgcagaagactagaaaagta 48570193  T
Q  129 taacaacggctattttg---------aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    |||||||| ||||||||         ||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  48570194 taacaacgactattttggaaggattaaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 48570293  T
Q  220 actactct 227  Q
    ||||||||    
T  48570294 actactct 48570301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 42284867 - 42284642
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||   || ||||||||||||| || ||||||||||||  ||| ||||  |||||||||||||||||||| ||   |    
T  42284867 tcatcagaagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcagaagattgaacttaaattttcaaaagctgtttcaaggactctaac 42284768  T
Q  98 tcgctagaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtac 197  Q
    ||||   || ||||||||||||| | ||| |     ||| ||||||||||| ||||||||||||| ||| |||| ||||||||||||||| |||||||||    
T  42284767 tcgcctaaagattgcagaagactggaaaattgtggcacgactattttgaaatgcattggatgctttttcttcaaagagcgttgacatagtacgtttgtac 42284668  T
Q  198 gaagtgtacaaccactatctgcacta 223  Q
    ||||||||||||||||| || |||||    
T  42284667 gaagtgtacaaccactacctccacta 42284642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 21204871 - 21204993
Alignment:
Q  106 aaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgt 204  Q
    ||||||||||||||| | ||||| |  ||||||||||||||||| |||||||||| | |||| |||| ||||||||||||||| ||||||||||||||||    
T  21204871 aaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgttaattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 21204970  T
Q  205 acaaccactatctgcactactct 227  Q
    ||||||||||  | |||||||||    
T  21204971 acaaccactacttccactactct 21204993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 21984696 - 21984606
Alignment:
Q  137 gctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  | |||||||||    
T  21984696 gctattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactct 21984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 30572413 - 30572207
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    |||||||||| || || ||||||| |||| |||| ||||||||||| ||||||||||||||||||  ||||   || | |||||||||||| | |||||     
T  30572413 tcaccagaagttgcagttcatcaggagatacaacttaaagcttcaatagctgtttcaaggattcaaactcgtctgaga-ttgcagaagactggaaaagta 30572315  T
Q  129 taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    || |||||||||||||||||         ||||||||||| |||||| |  | ||||||||||||||| || |||||||||||||||||||||||||| |    
T  30572314 tagcaacggctattttgaaaggattgaaaagcattggatgtttattcttagaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctcc 30572215  T
Q  220 actactct 227  Q
    ||||||||    
T  30572214 actactct 30572207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 21121039 - 21121134
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||| ||||| ||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||    
T  21121039 caacgactattctgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgacgtgtacaaccactacttccactactct 21121134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 21135135 - 21135230
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||| |||||| ||||| ||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||  | |||||||||    
T  21135135 caacagctattctgaaatgcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactaaatccactactct 21135230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 25448446 - 25448636
Alignment:
Q  48 tcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagttaa-caacggctatttt 144  Q
    |||||||||||| |||| |||||||||||||||||||| | |||||||  |||| ||| || ||||||||||||| | ||||| || || || |||||||    
T  25448446 tcatcagaagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aagattgcagaagactggaaaagtgaagcagcgactatttt 25448544  T
Q  145 gaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||| |         |||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  25448545 gaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 25448636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 37642353 - 37642258
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||| |||| ||||||| |||||||||||| |||| |||| ||||||||||||||| ||||| ||||||||||||||||||||  | |||||||||    
T  37642353 caacagctagtttgaaatgcattggatgctaattcttcaaagagcgttgacatagtacgtttatacgaagtgtacaaccactacttccactactct 37642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 35040256 - 35040176
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||  || |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  35040256 aaagcattggatgcttgatcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 35040176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 44821545 - 44821615
Alignment:
Q  157 atgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| |||| ||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  44821545 atgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaactactatctccactactct 44821615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 22600175 - 22600252
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  22600175 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 22600252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 36134279 - 36134200
Alignment:
Q  148 aagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  36134279 aagcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 36134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 2327432 - 2327510
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||||||||  |||| |||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  2327432 gcattggatgcttgttcctcaaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 2327510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 14263444 - 14263521
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||| |||||||| |||||||| || ||  |||||||||||||||||||||||||| || |||||||||    
T  14263444 gcattggatacttgttcctcaaagagcgttggcaaagcacgtttgtacgaagtgtacaaccactacctccactactct 14263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12284704 - 12284648
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  12284704 tcatcagaagcaagttcatcagaagcaagatcaccagaagctgaagttcatcagaag 12284648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17024796 - 17024852
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  17024796 tcatcagaagcaagttcatcagaagcaacatcaccagaagctgaagatcatcagaag 17024852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 39200986 - 39201062
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  39200986 cattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 39201062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 32785930 - 32786005
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| | || ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  32785930 gcattggatgcttgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 32786005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 7745083 - 7745160
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||| ||||||||| | |||| ||||||||||| ||| ||||| ||| |||||||||||||||| || |||||||||    
T  7745083 gcatttgatgcttatccttcaaagagcgttgacaaagtacgtttatacaaagtgtacaaccactacctccactactct 7745160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 12284513 - 12284437
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  ||||||||||||||||| |||||||| |||||    
T  12284513 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactatctccacta 12284437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 20954463 - 20954542
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| |||||||| |  | ||||||||||| ||| |  |||||| ||||||||||||||||||| ||||||||    
T  20954463 aaagcattggaggcttattctttgaagagcgttgacaaagtacaattgtaccaagtgtacaaccactatctccactactc 20954542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 35401896 - 35401821
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||| |||||||||||||||| || |||||||    
T  35401896 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactact 35401821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 22464802 - 22464880
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |   ||||||||||||||| |||||| || ||||||||||    
T  22464802 gcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacatccactacctccactactcta 22464880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 1900432 - 1900355
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||| |||| ||||||||||| ||| |  ||||| ||||||||||||||||| || |||||||||    
T  1900432 gcattgaatgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccactacctccactactct 1900355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 2268618 - 2268541
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| ||  ||||||||    
T  2268618 gcattgaatgcttgttcgtcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcgactactct 2268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 2834777 - 2834700
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| || |||||||| ||| || ||||||||| ||||||||||||  || |||||||||    
T  2834777 gcattggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccactgcctccactactct 2834700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 22201752 - 22201805
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  22201752 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 22201805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 38282653 - 38282577
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||| |||| ||||||||||| ||| |  ||||||||||| |||||||||||||| |||||||||    
T  38282653 gcattgaatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatctccactactct 38282577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44821376 - 44821472
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    |||||||||||||||| |||| ||||  |   |||||| ||||||||| ||||||| |||| |||| |||||||||||||| ||||| |||||||||    
T  44821376 tcatcagaagcaagtttatcagaagctgagaatcaccataagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattca 44821472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2327240 - 2327280
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  2327240 tcatcagaagcaagttcatcaaaagcgagttcatcagaagc 2327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 22153947 - 22153867
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| || ||| |  | ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  22153947 aaagcattggatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 22153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 28492421 - 28492473
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  28492421 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 28492473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 33256344 - 33256420
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | | ||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  33256344 gcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 33256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 33276516 - 33276592
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | | ||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  33276516 gcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 33276592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 1577957 - 1577878
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| |||    |||||| ||||||||||||||||||| ||||||||    
T  1577957 aaagcattggatgcttgttcttttaagagcgttgacaaagtataattgtactaagtgtacaaccactatctccactactc 1577878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 2267176 - 2267101
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||| || ||| |||| |||||||| || |||||  ||||| ||||||||||||||||| || |||||||    
T  2267176 gcattggatgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccactacctccactact 2267101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2327270 - 2327356
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgttt 84  Q
    |||||||||||||||| |||| ||||  ||  ||||||||||||| || ||||||| |||| |||| |||||||||||||| |||||    
T  2327270 tcatcagaagcaagtttatcagaagccaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttt 2327356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 10757511 - 10757432
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| || ||| |  | |||| |||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  10757511 aaagcattggatgattgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactatcttcactactc 10757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 12284661 - 12284614
Alignment:
Q  12 aagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    |||||||||| ||||||| ||||||||||||| || ||||||||||||    
T  12284661 aagttcatcagaagcaagatcaccagaagctgaagttcatcagaagat 12284614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 22427350 - 22427425
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| | ||  |||||||||| ||| |  ||||||||||||||||||||||| || |||||||    
T  22427350 gcattggatgcttgttcttaaaaaagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 22427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 30893155 - 30893104
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||| ||||||||| |  |||||||||||||||||||||||||| |||||||    
T  30893155 agcgctgacatagtacaattgtacgaagtgtacaaccactatctccactact 30893104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39200823 - 39200908
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtt 83  Q
    |||||| |||||||||||||||||||  ||  |||||| |||||| || |||| || |||| |||| |||||||||||||||||||    
T  39200823 tcatcaaaagcaagttcatcaaaagctgaaaatcaccaaaagctgcagttcattaggagatgcaacataaagcttcaaaagctgtt 39200908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 21029044 - 21029003
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||||||||||||||| ||||||||| |||||| ||||||    
T  21029044 tcatcaaaagcaagttcatcagaagctgaagatcaccagaag 21029003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 21191858 - 21191935
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |  | |||||||| || ||| |  ||||||||||||||||||||||| || |||||||||    
T  21191858 gcattggatgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactacctccactactct 21191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 29215884 - 29215807
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||| | ||| ||| |  ||||||||||||||||| ||||| || |||||||||    
T  29215884 gcattggatgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcactagctccactactct 29215807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 7744953 - 7745017
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||| || |||||||||||| ||||||| || |||||||| ||||| | |||||||    
T  7744953 tcaccagaagctgcagttcatcagaagatgcaacctacagtttcaaaagttgtttaatggattca 7745017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 12613804 - 12613884
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| ||||| ||| |  | |||||||| || ||| |  ||||||||||||||||||||||| || |||||||||    
T  12613804 aaagcattggttgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactaccttcactactct 12613884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17371290 - 17371234
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||||  | ||||||||| | |||| ||||||    
T  17371290 tcatcagaagcaagttcatcagaagcaagtctatcagaagctgcatatcaccagaag 17371234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46089244 - 46089212
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttca 33  Q
    ||||||||||||||||||||| |||||||||||    
T  46089244 tcatcagaagcaagttcatcagaagcaagttca 46089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 9699974 - 9700185
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcaga 115  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  9699974 tcatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcgccagaaaattgcaga 9700073  T
Q  116 agacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9700074 agacttggaaagttaacaacgactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactat 9700173  T
Q  216 ctgcactactct 227  Q
    ||||||||||||    
T  9700174 ctgcactactct 9700185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 1727967 - 1728164
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagtt 129  Q
    ||||||||||||| || ||||||| ||||  ||| || || |||||||| |||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  1727967 tcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgtttcaaggattcaatctcgccagaaaattgcaaaagacttggaaagtt 1728066  T
Q  130 aacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1728067 aacaacggctattttgaaaagcattggatgcttattcctcaaggaacattgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 1728164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37412840 - 37412615
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    |||||||||||||||| |||| |||| ||||||||| |||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  37412840 tcatcagaagcaagtttatcagaagctagttcaccaaaagctgcagattatcagaagatcaatctaaagtttcaaaagctgtttcaaggattcaagctcg 37412741  T
Q  101 ctagaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaa 200  Q
    |  |||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||| ||||  ||||| |||||||| |||||||||||||||    
T  37412740 cctgaag-ttgcagaaatcttggaaagtttgcaacggctattttgaaaagcattggatgcttaatcctataggagagttgacattgtgcgtttgtacgaa 37412642  T
Q  201 gtgtacaaccactatctgcactactct 227  Q
     |||||||||||||||| |||||||||    
T  37412641 atgtacaaccactatctccactactct 37412615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 21605605 - 21605803
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| || || ||||||| ||||  ||| |||||||||||||| ||||||||||| ||   |||| |||| ||||||||||||||| | |||||    
T  21605605 tcaccagaagttgcagttcatcaggagatggaacttaaagcttcaaaagttgtttcaaggactctaactcgcctag-aaattgcagaagactggaaaagt 21605703  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     | |||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  21605704 atgacaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactct 21605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 46796287 - 46796514
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   |||| |||||||| || ||||||| |||| |||| |||||||||||||| ||||| |||||||||      
T  46796287 tcatcagaagcaagttcatcagaagct-gtgaatcacaagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaa 46796385  T
Q  97 ctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    |||| |  || ||||||||||||| | ||||| | |||||||||| ||||||| ||||| ||| ||||||| |||| ||||||||||||||| |||||||    
T  46796386 ctcg-tctaagattgcagaagactggaaaagtattacaacggctaatttgaaaggcattagatacttattcttcaaagagcgttgacatagtacgtttgt 46796484  T
Q  196 acgaagtgtacaaccactatctgcactact 225  Q
    |||||||||||||||||||||| |||||||    
T  46796485 acgaagtgtacaaccactatctccactact 46796514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 21636656 - 21636819
Alignment:
Q  65 taaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgctt 162  Q
    |||||||||||||||||||||||||| ||   |||| |||| ||||||||||||||| | ||||| |  ||||| ||||||||||| |||||||||||||    
T  21636656 taaagcttcaaaagctgtttcaaggactctaactcgcctag-aaattgcagaagactggaaaagtatggcaacgactattttgaaatgcattggatgctt 21636754  T
Q  163 attcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||||||  | |||||||||    
T  21636755 attcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactct 21636819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 40851176 - 40850991
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||  || ||||||| ||||  ||| ||||||||||||||||| |||||||| ||   |||| |||| ||||||||||||||| | |||||    
T  40851176 tcaccagaagctacagttcatcaggagatggaacttaaagcttcaaaagctggttcaaggactctaactcgcctag-aaattgcagaagactggaaaagt 40851078  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
     |  ||||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||    
T  40851077 atggcaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccacta 40850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 21641083 - 21640876
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    |||||||||| || || ||||||| |||| |||| |||||| |||||||||||||||||||||||  |||||   || |||| |||||||| | |||||     
T  21641083 tcaccagaagttgcagttcatcaggagatgcaacttaaagcctcaaaagctgtttcaaggattcaaactcgcct-aagattgtagaagactggaaaagta 21640985  T
Q  129 taacaacggctattttg---------aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    || ||||||||||||||         ||||||||||||||||||||  |||| ||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  21640984 tagcaacggctattttggaaggattgaaaagcattggatgcttatttttcaaagagcgttgacatagtacgtttttacgaagtgtacaaccactatctcc 21640885  T
Q  220 actactcta 228  Q
    |||||||||    
T  21640884 actactcta 21640876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 30054204 - 30054366
Alignment:
Q  66 aaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttat 164  Q
    ||||||||||||||||||||||| |||||  |||||   |||||||||||||||||| ||||| || ||||| ||| ||||||| ||||||| |||||||    
T  30054204 aaagcttcaaaagctgtttcaagaattcaaactcgcct-aaaattgcagaagacttgaaaagtatagcaacgactactttgaaaggcattgggtgcttat 30054302  T
Q  165 tcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||  |||  ||||||||||||||| |||||||||||| ||||||||||||| || |||||||||    
T  30054303 tcaacaaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactaactccactactct 30054366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 49666357 - 49666554
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| |||||||||||||| |||||||||||||||  |||| |  || ||||||||||||| | |||||     
T  49666357 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcg-tctaagattgcagaagactggaaaagta 49666455  T
Q  129 taacaacggctattttgaaaagcattggatg-cttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||| ||||||||||| | |||| | | | ||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  49666456 taacaacgactattttgaaagg-attgaaagacatattcttcaaagagcattgacatattacgtttgtacgaagtgtacaaccactatctccactactct 49666554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5213822 - 5213587
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctc 99  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||| ||||||| |||| |||| |||||||||||||||||||| | |||||||  |||    
T  5213822 tcatcagaagca-gttcatcataagcaagtttatcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactc 5213724  T
Q  100 gctagaaa-attgcagaagacttggaaagt-taacaacggctattttg---------aaaagcattggatgcttattcctcaaggagcgttgacatagtg 188  Q
    | || ||| ||||||||||||| | ||||| || ||||  ||||||||          || ||||| ||||||||||  ||||  ||||||||| ||||     
T  5213723 g-tataaagattgcagaagactggaaaagtatagcaacaactattttggaaggatttgaaggcattagatgcttattattcaa-aagcgttgacgtagta 5213626  T
Q  189 cgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| || |||||||||    
T  5213625 cgtttgtacgaagtgtacaaccactacctccactactct 5213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 2785282 - 2785074
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| ||||| ||||||| |||| |||| |||||||||||||| ||||| | |||||||  |||| ||| || ||||||||||||| | |||||    
T  2785282 tcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtcta-aagattgcagaagactggaaaagt 2785184  T
Q  129 taa-caacggctattttgaaaag---------cattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
     || ||||  ||||||||||| |         |||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||    
T  2785183 gaagcaacaactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacct 2785084  T
Q  218 gcactactct 227  Q
     |||||||||    
T  2785083 ccactactct 2785074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 14955514 - 14955437
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  14955514 gcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 14955437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 11223650 - 11223573
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| |||  |||||||||||||||||||||||||||| |||||||||    
T  11223650 gcattggatgcttgttcttcaaagagcgttgacaaagtatgtttgtacgaagtgtacaaccactatctccactactct 11223573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 22140859 - 22140774
Alignment:
Q  141 ttttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| |||||||||||| ||| |||| ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||    
T  22140859 ttttgaaaa-cattggatgcttgttcttcaaagagcgttgacatagtacgtatgtacgaagtgtataaccactacctccactactct 22140774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 29855496 - 29855419
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| ||||  |||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  29855496 gcattggatgcttgttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccactacctccactactct 29855419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 53056799 - 53056876
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||| ||| ||| |||||||||||||||||||||||||| || |||||||||    
T  53056799 gcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 53056876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 20627503 - 20627578
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||  |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||    
T  20627503 gcattggatgcttgtttatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactact 20627578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 33583317 - 33583238
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||||||||||||| || || |||||||    
T  33583317 gcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccaatactcta 33583238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 14969414 - 14969341
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    ||||||||||||||||| ||||  |||||||||| ||| | ||| ||||||||||||||||||||||| |||||    
T  14969414 gcattggatgcttattcttcaaatagcgttgacaaagtacatttttacgaagtgtacaaccactatctccacta 14969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 24775606 - 24775683
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||||||| |||| |||| |||||| ||| ||||||||||||||||||||||||||  | |||||||||    
T  24775606 gcattgaatgcttattcttcaaagagctttgacaaagtacgtttgtacgaagtgtacaaccactacatccactactct 24775683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 47207793 - 47207716
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  47207793 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 47207716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 12963154 - 12963233
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||| ||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  12963154 aaagcattggatgcttgttctttgaagagtgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 12963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 20646244 - 20646165
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  ||||||||||||||||||||||| || ||||||||    
T  20646244 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactc 20646165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12962995 - 12963053
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||| ||||    
T  12962995 tcatcagaagcaagttcatcagaagcaagatcaccagaagttgtagttcatcaggagat 12963053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 14393073 - 14393151
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  14393073 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 14393151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 16658687 - 16658765
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||||||||||||| |  | ||||||||||||| | |  ||||||||||||||||||||||| || |||||||    
T  16658687 aaagcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactacctccactact 16658765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 38177715 - 38177793
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||| | || ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||||    
T  38177715 gcattggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcta 38177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18121515 - 18121571
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||||||||||||||| || |||||  |||||| ||||||    
T  18121515 tcatcagaagcaagttcatcaaaagcaagttcatcataagctaaagatcaccagaag 18121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 28582193 - 28582117
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |||| ||||||||||| | | |  ||||||||||||||||||||||| || ||||||||    
T  28582193 gcattggatgcttgttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactc 28582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 41495086 - 41495010
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  41495086 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 41495010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 11868338 - 11868279
Alignment:
Q  168 tcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||| ||||||||||| ||| || ||||||||||||||||||||||| || |||||||||    
T  11868338 tcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactacctccactactct 11868279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 11909096 - 11909171
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||||| | |||| ||||||||||| ||| ||| | |||||||||||| ||||||| || |||||||    
T  11909096 gcattggatgcttatccttcaaagagcgttgacaaagtacgtctttacgaagtgtacgaccactacctccactact 11909171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 40799959 - 40799884
Alignment:
Q  152 attggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  40799959 attggatacttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 40799884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 37467420 - 37467346
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactac 224  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||    
T  37467420 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactac 37467346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 49553561 - 49553639
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    |||||||||| || ||| |||  ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||||    
T  49553561 gcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcta 49553639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 18121694 - 18121771
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||| |||| ||||||| ||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  18121694 gcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactct 18121771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 18142824 - 18142901
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||| |||| ||||||| ||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  18142824 gcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactct 18142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 50300287 - 50300246
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  50300287 gagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 50300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13824156 - 13824092
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||    
T  13824156 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 13948423 - 13948347
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||| ||||| || |||||    
T  13948423 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatctccattactc 13948347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21636574 - 21636630
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||  |||| ||||||    
T  21636574 tcatcagaagcaaggtcatcagaagcaagttcatcagaagctgtgtatcaccagaag 21636630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 2561273 - 2561198
Alignment:
Q  152 attggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| ||| |||| || |||||||| ||| |   |||||||||||||||||||||| || |||||||||    
T  2561273 attggatgcttgttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccactacctccactactct 2561198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 17239018 - 17239069
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  17239018 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 17239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14955691 - 14955649
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctg 43  Q
    ||||||||||||||||||||| ||||||||| | |||||||||    
T  14955691 tcatcagaagcaagttcatcagaagcaagtttatcagaagctg 14955649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 45858821 - 45858875
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgt 204  Q
    ||||||||||||||| | |||| ||||||||||| ||| ||| ||||||||||||    
T  45858821 gcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgt 45858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 13780679 - 13780732
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||| ||||    
T  13780679 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacgactc 13780732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 16032612 - 16032535
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |  | |||| |||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  16032612 gcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 16032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19888854 - 19888895
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagct 42  Q
    ||||||||||||||||||||| ||||||| |||| |||||||    
T  19888854 tcatcagaagcaagttcatcagaagcaagatcactagaagct 19888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 22804118 - 22804171
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  22804118 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 22804171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 31303450 - 31303397
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||| ||||||| ||||||||    
T  31303450 gagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactc 31303397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 49642857 - 49642910
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||| ||||||||||||||||||| ||||||||    
T  49642857 gagcgttgacaaagtacaattgtacaaagtgtacaaccactatctccactactc 49642910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 12726299 - 12726379
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| || | || ||| ||| ||| ||| |  |||||| |||||||||||||||| || |||||||||    
T  12726299 aaagcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccactacctccactactct 12726379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 12968348 - 12968316
Alignment:
Q  195 tacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||||| |||||||||    
T  12968348 tacgaagtgtacaaccactatctccactactct 12968316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14955706 - 14955666
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||| ||||||||||| |||||||    
T  14955706 tcatcagaagcaaggtcatcagaagcaagttcatcagaagc 14955666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 23538280 - 23538312
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||||||||||||||||||| ||||||    
T  23538280 ttgtacgaagtgtacaaccactatctccactac 23538312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28582372 - 28582316
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| |||||||| ||  |||||||| | |||| ||||||    
T  28582372 tcatcagaagcaagttcatcagaagcaagtacattagaagctgaaaatcaccagaag 28582316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46349739 - 46349795
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||| ||||||||| |||||||||||  |||||||| | |||| ||||||    
T  46349739 tcatcagaagcgagttcatcagaagcaagttcattagaagctgaaaatcaccagaag 46349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 17316443 - 17316661
Alignment:
Q  7 gaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaa 106  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||    
T  17316443 gaagtaagttcatcagaagcaagttcaccagaagctgcagatcatcagaagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcgccaaaa 17316542  T
Q  107 aattgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtac 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17316543 aattgcagaagacttggaaagttaacagcggctattttgaaaagcatcggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtac 17316642  T
Q  207 aaccactatctgcactact 225  Q
    |||||||||||||||||||    
T  17316643 aaccactatctgcactact 17316661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19482989 - 19482763
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    |||||||| |||||||||||| |||||||||||  |||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||| ||| |    
T  19482989 tcatcagatgcaagttcatcagaagcaagttcattagaagctgcagatcaccagaagctcaacctaaagcttcaaaagttgtttcaaggattcaagcttg 19482890  T
Q  101 ctagaaaattgcagaagacttggaaagttaacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaa 200  Q
    | |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19482889 ccagaaaattgcagcagacttggaaatttaacaacatctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaa 19482790  T
Q  201 gtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||||    
T  19482789 gtgtacaaccactatctgcactactct 19482763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19065926 - 19066156
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagca--agttcaccagaagctgtagatcatcagaagatcaacct-aaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||   |  ||||||||||||| || ||||||| ||||  | || ||||||||||||||||||||||||| ||   |    
T  19065926 tcatcagaagcaagttcatcagaagctgtatatcaccagaagctgcagttcatcaggagatggatcttaaagcttcaaaagctgtttcaaggactctaac 19066025  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    ||| |||| ||||||||||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||  ||||||    
T  19066026 tcgcctag-aaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtatgtttgt 19066124  T
Q  196 acgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||  | |||||||||    
T  19066125 acgaagtgtacaaccactacttccactactct 19066156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 12349206 - 12349004
Alignment:
Q  35 cagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt-taac 132  Q
    ||||||||| || ||||||| |||| |||| || |||||||||||||||||||||||||||  |||| |  || ||||||||||||| | ||||| || |    
T  12349206 cagaagctgcagttcatcaggagatgcaacttagagcttcaaaagctgtttcaaggattcaaactcg-tctaagattgcagaagactggaaaagtatagc 12349108  T
Q  133 aacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    |||| ||||||||||| |         |||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  12349107 aacgactattttgaaaggattgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactatctccacta 12349008  T
Q  224 ctct 227  Q
    ||||    
T  12349007 ctct 12349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22076306 - 22076545
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   |||||||||| ||||| ||||||| |||| |||| |||||||| ||||||||||| ||||||| |      
T  22076306 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaaaggatttaaa 22076404  T
Q  97 ctcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacata 185  Q
    |||| ||| || ||||||||||||| | ||||| || ||||| |||||||| ||         |||||| ||||||||||| |||| |||||||||||||    
T  22076405 ctcgtcta-aagattgcagaagactcgaaaagtatagcaacgactattttggaaggattggaaagcatttgatgcttattcttcaaagagcgttgacata 22076503  T
Q  186 gtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    || | ||||||||||||||||||||||||||| |||||||||    
T  22076504 gtacatttgtacgaagtgtacaaccactatctccactactct 22076545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21618494 - 21618255
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||||||||||||||| |||||||||||| |||| |||||||||||||| ||||| | |||||||  |    
T  21618494 tcatcagaagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcagaagatgcaacttaaagcttcaaaagttgtttaacggattcaaac 21618395  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||  ||| || |||| |||||||| | ||||| || ||||| |||||||| || |         |||||||||||||||| |||| ||||||||||||||    
T  21618394 tcttcta-aagattgtagaagactggaaaagtaaagcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatag 21618296  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||||||||| || |||||||||    
T  21618295 tacgtttgtacgaagtgtacaaccactacctccactactct 21618255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 16336345 - 16336138
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| ||||||||||||| |||| |||| | |||||||||||| ||||| |||||||||  |||| ||| || ||||||||||||| | |||||    
T  16336345 tcaccagaagttgtagatcatcaggagatgcaacttgaagcttcaaaagttgtttaaaggattcaaactcgtcta-aacattgcagaagactggaaaagt 16336247  T
Q  129 -taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctg 218  Q
     || ||||| |||||||| || |         ||||| |||||||||| |||| ||||||||||||||| || ||||||||||||||||||||||||||     
T  16336246 atagcaacgactattttggaaggattagaaggcattgaatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatcta 16336147  T
Q  219 cactactct 227  Q
    |||||||||    
T  16336146 cactactct 16336138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 12423349 - 12423272
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  12423349 gcattgtatgcttattcttcaaagagcgttgacatagtacctttgtacgaagtgtacaaccactatctccactactct 12423272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 33351981 - 33352064
Alignment:
Q  143 ttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||||||||| |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  33351981 ttgaaaaacattggatgtttattcttcaag-agcgttgacatagtacgtttgtacgaagtgtacaatcactatctccactactct 33352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 16877299 - 16877224
Alignment:
Q  152 attggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  16877299 attggatgctaattcctcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 16877224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 19086288 - 19086170
Alignment:
Q  108 attgcagaagacttggaaagttaa-caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtac 206  Q
    ||||||||||||| ||| ||| || ||||| ||||||||||| ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||    
T  19086288 attgcagaagactgggagagtgaagcaacgactattttgaaa-gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtac 19086190  T
Q  207 aaccactatctgcactactc 226  Q
    ||||||||||| ||||||||    
T  19086189 aaccactatctccactactc 19086170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 19832963 - 19833171
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| ||||| ||||||| |||| |||| |||||||| ||||||||||| | |||||||  |||  ||| || ||||||||||||| | |||||    
T  19832963 tcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacggattcaaactcatcta-aagattgcagaagactggaaaagt 19833061  T
Q  129 taa-caacggctattttgaaaag---------cattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
     || ||||| ||||||||||| |         |||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||| ||||| ||    
T  19833062 gaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaagcactacct 19833161  T
Q  218 gcactactct 227  Q
     |||||||||    
T  19833162 ccactactct 19833171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 20487979 - 20488056
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |||||||||||||| ||||||||||| || |||||||||    
T  20487979 gcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtttacaaccactacctccactactct 20488056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 24116919 - 24116840
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  24116919 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 24116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 15954791 - 15954714
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| |||||| ||  |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  15954791 gcattgaatgcttgttattcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 15954714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 32544353 - 32544276
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| |||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  32544353 gcattggatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 32544276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 22802229 - 22802151
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||| |||| ||||||| ||| ||| |  ||||||||||||||||||||||| || ||||||||||    
T  22802229 gcattggatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactacctccactactcta 22802151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 9717931 - 9717854
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||| ||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  9717931 gcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 9717854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 15531685 - 15531762
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||| |||||||||||| || |||||||||    
T  15531685 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccactacctccactactct 15531762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 20112758 - 20112837
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  ||||||||| |||||||||||||||| ||||||||    
T  20112758 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactc 20112837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 21625189 - 21625114
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||| |||||| ||| |||| ||||||| ||| ||| |  |||||||||||||||||||||||||| |||||||    
T  21625189 gcattgcatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctccactact 21625114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 29918099 - 29918028
Alignment:
Q  156 gatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  29918099 gatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 29918028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29918266 - 29918208
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    |||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||| ||||    
T  29918266 tcattagaagcaagtccatcagaagcaagttcatcagaagctgtagttcatcaggagat 29918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 14100501 - 14100578
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| | || ||||||||||| ||| |  || |||||||||||||||||||| || |||||||||    
T  14100501 gcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacctccactactct 14100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 16265211 - 16265288
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||| | ||| |  ||||||||||||| ||||||||| || |||||||||    
T  16265211 gcattggatgcttgttcttcaaagagcgttgagaaagtacaattgtacgaagtgtgcaaccactacctccactactct 16265288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 21235213 - 21235136
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||| ||||||| ||| |||| ||||||||||| ||| |  ||||| ||||||||||||||||| || |||||||||    
T  21235213 gcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactct 21235136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 15302288 - 15302212
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | |||||||||||| || |  |||||| ||||||||||||||||||| ||||||||    
T  15302288 gcattggatgcttgttctttgaagagcgttgacattgtacaattgtacaaagtgtacaaccactatctccactactc 15302212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 15987321 - 15987245
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| || |||||    
T  15987321 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactc 15987245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 12715478 - 12715557
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||| |||| ||||| |  | ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  12715478 aaagcattgtatgcctattctttgaagagcgttgacaaagtacaattgtacgaagtgtagaaccactatctccactactc 12715557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 17381591 - 17381536
Alignment:
Q  168 tcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    |||| ||||||||||| ||| |||||||||||||||||||| ||||| || |||||    
T  17381591 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaatcactacctccacta 17381536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 26589708 - 26589610
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttat--tcctcaaggagcgttgacatagtgcgtttgtacg-aagtgtacaaccactatctgcactactct 227  Q
    |||| |||| ||||||| |||||||||||| ||  |  |||| ||||||||||||||| ||| |||||| ||||||||||||||||  | |||||||||    
T  26589708 caacagctagtttgaaatgcattggatgctaatgattttcaaagagcgttgacatagtacgtctgtacgaaagtgtacaaccactacttccactactct 26589610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 13435596 - 13435542
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    |||||||||| ||| |  ||||||||||||||||||||||| || ||||||||||    
T  13435596 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcta 13435542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 15954919 - 15954857
Alignment:
Q  33 accagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    |||||||||||||| ||||||  |||| |||| |||||||||||||||||||| | |||||||    
T  15954919 accagaagctgtagttcatcaagagatgcaacttaaagcttcaaaagctgtttaacggattca 15954857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17381679 - 17381649
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagtt 31  Q
    |||||||||||||||||||||||||||||||    
T  17381679 tcatcagaagcaagttcatcaaaagcaagtt 17381649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 18378360 - 18378326
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  18378360 ttgtacgaagtgtacaaccactatctccactactc 18378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 19624025 - 19623991
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  19624025 ttgtacgaagtgtacaaccactatctccactactc 19623991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 20730765 - 20730842
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  |||||| |||||||||||||||| || |||| ||||    
T  20730765 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactgctct 20730842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 18435644 - 18435580
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |   ||||| ||||||||||||||||    
T  18435644 gcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacaaagtgtacaaccacta 18435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 19688854 - 19688790
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  |||||||||||||| ||||||||    
T  19688854 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 19688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 23284652 - 23284576
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||| |||||| |||||  | ||||||||||| ||| |  |||||||||||||| ||||| ||||| ||||||||    
T  23284652 gcattgaatgcttgttccttgaagagcgttgacaaagtacaattgtacgaagtgtataaccattatctccactactc 23284576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26589873 - 26589833
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    ||||||||||||||||||||| ||||||| ||| |||||||    
T  26589873 tcatcagaagcaagttcatcagaagcaaggtcatcagaagc 26589833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 963 - 735
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  963 tcatcagaagcaagttcatcataagcaagttcaccagaagctgcagatcatcaaaagatcaacctaaagcttcaaaagctgtttcaaggattcaagctcg 864  T
Q  101 ctag-aaaattgcagaagacttggaaagttaacaacggctattttg-aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg 198  Q
    | || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  863 ccagaaaaattgcagaagactttgaaagttaacaacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacg 764  T
Q  199 aagtgtacaaccactatctgcactactct 227  Q
    |||||||||| ||||||||||||||||||    
T  763 aagtgtacaatcactatctgcactactct 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23391505 - 23391733
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23391505 tcatcagaagcaagttcatcataagcaagttcaccagaagctgcagatcatcaaaagatcaacctaaagcttcaaaagctgtttcaaggattcaagctcg 23391604  T
Q  101 ctag-aaaattgcagaagacttggaaagttaacaacggctattttg-aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg 198  Q
    | || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23391605 ccagaaaaattgcagaagactttgaaagttaacaacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacg 23391704  T
Q  199 aagtgtacaaccactatctgcactactct 227  Q
    |||||||||| ||||||||||||||||||    
T  23391705 aagtgtacaatcactatctgcactactct 23391733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 28464272 - 28464469
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| ||||||||||||||||||||||||||||||  |||| |  || |||||||||||||   |||||     
T  28464272 tcaccagaagctgcagttcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaactcg-tctaagattgcagaagactaaaaaagta 28464370  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  28464371 taacaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctctactactct 28464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 10848978 - 10848780
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||  |||| |||| |||||||||||||| |||||||||||||||  |||||   |||||||||||| ||| | |||||     
T  10848978 tcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcagaaaactggaaaagta 10848879  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |  || | |||||||||||| ||||| ||||||||||| |||| ||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||    
T  10848878 tggcatcagctattttgaaaggcattagatgcttattcttcaaagagcgttgacataatacgtttgtacaaagtgtacaaccactatctccactactct 10848780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 9089173 - 9088976
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| ||||| |||||||||||||| ||||| |||  |||| |  |  |||| |||||||| | |||||     
T  9089173 tcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagctgtttaaaggaatcaaactcg-tctatgattgaagaagactggaaaagta 9089075  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||| |||||||| || |||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  9089074 ttacaacgactattttggaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 9088976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 25930088 - 25930286
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||| |  ||||||| |||| |||| |||||||||||||| ||||| |||||||||  |||| ||| || |||||| |||||| | |||||    
T  25930088 tcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtcta-aagattgcataagactggaaaagt 25930186  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     |||||||||||| |||  || ||||||||||||||||  |||| ||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  25930187 ataacaacggctaatttagaaggcattggatgcttatttttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctctactactct 25930286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 3245365 - 3245571
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| ||||||||| ||| ||||||||||||||||  |||| |  || ||||||||||||| | |||||     
T  3245365 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttccaaaactgtttcaaggattcaaactcg-tctaagattgcagaagactggaaaagta 3245463  T
Q  129 taacaacggctattttgaaaa---------gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    || |||||||||||||||||          ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  3245464 tagcaacggctattttgaaagaattgaaaggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 3245563  T
Q  220 actactct 227  Q
    | ||||||    
T  3245564 agtactct 3245571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 35932014 - 35932136
Alignment:
Q  106 aaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgt 204  Q
    ||||||||||||||| | ||||| |  ||||| ||||||||||| ||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||    
T  35932014 aaattgcagaagactggaaaagtatggcaacgactattttgaaacgcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgt 35932113  T
Q  205 acaaccactatctgcactactct 227  Q
    ||||||||||  | |||||||||    
T  35932114 acaaccactacttccactactct 35932136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 29138459 - 29138536
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  29138459 gcattggatgcttattcttcaaagagcgttgtcatagtacgtttgtacgaagtgtacaaccactatctccactactct 29138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 35986132 - 35986362
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   |||||||||| || || ||||||| ||||  ||| ||||| |||||||| ||||||||||| ||       
T  35986132 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagttgcagttcatcaggagattgaacttaaagtttcaaaagatgtttcaaggactctaa 35986230  T
Q  97 ctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    |||||   |||||||||||||||| | ||||| |  ||||| ||||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||| |||    
T  35986231 ctcgcct-aaaattgcagaagactggaaaagtgtggcaacgactattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtctgt 35986329  T
Q  196 ac-gaagtgtacaaccactatctgcactactct 227  Q
    ||  ||||||||||||||||  | |||||||||    
T  35986330 acaaaagtgtacaaccactacttccactactct 35986362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 30115890 - 30115967
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||| ||||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  30115890 gcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactatctccactactct 30115967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 15517183 - 15516976
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| ||||| |||||||||||| |||| |||||||||||||| ||||  | |||||||  |||| ||| || ||||||||||||| | |||||    
T  15517183 tcaccagaagttgtagttcatcagaagatgcaacttaaagcttcaaaagttgttcaacggattcaaactcgtcta-aagattgcagaagactggaaaagt 15517085  T
Q  129 -taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctg 218  Q
     || |||||||||||||| || |         |||||||||||||||| |||| ||| |||| |||||| | |||||||||||||||||||||||| ||     
T  15517084 atagcaacggctattttggaaggatttgaaggcattggatgcttattcttcaaagagtgttggcatagtacttttgtacgaagtgtacaaccactacctc 15516985  T
Q  219 cactactct 227  Q
    |||||||||    
T  15516984 cactactct 15516976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 26759363 - 26759155
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    |||||||||| ||||| ||||||| |||| |||| |||||||||||||| ||||| | |||||||   ||||   || ||||||||||||| | |||||     
T  26759363 tcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaattcgcctaaagattgcagaagactggaaaagta 26759264  T
Q  129 taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgc 219  Q
    |||||||| |||||||| || |         |||||||||||||||| |||| ||||| ||| |||||  ||||||||||||||||||||||||| || |    
T  26759263 taacaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtaagtttgtacgaagtgtacaaccactacctcc 26759164  T
Q  220 actactcta 228  Q
    |||||||||    
T  26759163 actactcta 26759155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 28139690 - 28139614
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| |||  |||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  28139690 cattggatgcttattcttcatagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctccactactct 28139614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 21660308 - 21660219
Alignment:
Q  138 ctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||| |||||||||||||| ||||||| || ||||||||||||  |||||||||||||||||||||||||  | |||||||||    
T  21660308 ctattttcaaatgcattggatgcttagtcctcaaagatcgttgacatagtatgtttgtacgaagtgtacaaccactacttccactactct 21660219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 30743064 - 30742987
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| |||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| || |||||||||    
T  30743064 gcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct 30742987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 14086428 - 14086669
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaagg-attcatg 96  Q
    |||||||||||||||| |||||||||  ||  | ||||||||||| || |||||||| ||| |||| ||| |||||||||||||||| | || |||||      
T  14086428 tcatcagaagcaagtttatcaaaagctaaaaattaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaac 14086527  T
Q  97 ctcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaa---------aagcattggatgcttattcctcaag-gagcgttgacat 184  Q
    |||| ||| |  ||||||||||||| | ||||| || ||||||||||||||||         | ||||||||||||| ||||||||  |||||||||||     
T  14086528 ctcgtcta-aggattgcagaagactggaaaagtgaagcaacggctattttgaagtgatttgaatgcattggatgcttgttcctcaaaagagcgttgacaa 14086626  T
Q  185 agtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||| |||||||||||||||||||||| ||| || |||||||||    
T  14086627 agtacgtttgtacgaagtgtacaaccgctacctccactactct 14086669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 33933352 - 33933274
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||||||||  ||||||||| ||||| |||||||||||||||||||||||||| || |||||||||    
T  33933352 gcattggatgcttgttcctcaaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactacctccactactct 33933274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 4887106 - 4887029
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||    
T  4887106 gcattggatgcttgttcttcaaagagcgttgacaaagtacgtgtgtacgaagtgtacaaccactacctccactactct 4887029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 26765582 - 26765505
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||||  || |||||||||    
T  26765582 gcattggatgcttattcttcaaagagcgctgaaatagtacgtttgtacgaagtgtacaaccactgcctccactactct 26765505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 42243895 - 42243687
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||| | |||||||  |||| ||| |||||||||||||||| | |||||    
T  42243895 tcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aaaattgcagaagactggaaaagt 42243797  T
Q  129 taa-caacggctattttgaaaag---------cattggatgcttattcc-tcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
     || ||||  ||||||||||| |         |||| |||| || |||| | || ||||||||||| | | |||||||||||||||||||||||||| ||    
T  42243796 gaagcaacaactattttgaaaggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgtttgtacgaagtgtacaaccactacct 42243697  T
Q  218 gcactactct 227  Q
     |||||||||    
T  42243696 ccactactct 42243687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 11993975 - 11993895
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| ||| |||| ||||||||||| ||| ||| ||||||||||||||||||||||  | |||||||||    
T  11993975 aaagcattggatgcttgttcttcaaagagcgttgacaaagtacgtatgtacgaagtgtacaaccactacttccactactct 11993895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 7745746 - 7745822
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||    
T  7745746 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 7745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 21072290 - 21072369
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  ||||||||||||||||||||||||||  |||||||    
T  21072290 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactc 21072369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 23413024 - 23413103
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||  |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  23413024 aaagcattggatgcttgttttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 23413103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 19536351 - 19536429
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| || ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| |||||||    
T  19536351 aaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 19536429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23412865 - 23412923
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| || ||||||| ||||    
T  23412865 tcatcagaagcaagttcatcagaagcaagatcaccagaagctgaagttcatcaggagat 23412923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 32160850 - 32160773
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| | |||| ||||||||||| ||  ||| |||||||||||||| ||||||| || |||||||||    
T  32160850 gcattggatgcttatccttcaaagagcgttgacaaagaacgtatgtacgaagtgtacgaccactacctccactactct 32160773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 21910640 - 21910564
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  21910640 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 21910564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 23881128 - 23881076
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||| |||||  |||||||||||||||||||||||||| |||||||    
T  23881128 gagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctccactact 23881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 26784434 - 26784362
Alignment:
Q  154 tggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| |  | ||||||||||||||| |  ||||||||||||||||||||||| || ||||||||    
T  26784434 tggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactc 26784362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 41566487 - 41566563
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||| |||||| |  | ||||||||| ||||| |  |||||||||||||||||||||||||| ||||||||    
T  41566487 gcattggatgtttattctttgaagagcgttgatatagtacaattgtacgaagtgtacaaccactatctccactactc 41566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 89472 - 89551
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||| |||||| ||| |  | |||| |||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  89472 aaagcattgcatgcttgttctttgaagagcattgacatagtacaattgtacgaagtgtacaaccactatctccactactc 89551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 33022748 - 33022673
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||    
T  33022748 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 33022673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 642783 - 642837
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  642783 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 642837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6512322 - 6512380
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| |||| ||||| ||||| ||||||| ||||    
T  6512322 tcatcagaagcaagttcatcagaagcaagatcactagaagttgtagttcatcaggagat 6512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 13545565 - 13545643
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |   |||||||||||||||||||| | || ||||||||||    
T  13545565 gcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccaccacctccactactcta 13545643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 6499300 - 6499247
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  6499300 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 6499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 6512504 - 6512557
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  6512504 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatcttcactactc 6512557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 12352871 - 12352924
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  12352871 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12352924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 17815055 - 17814976
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||| ||||||| ||| |  | ||||||||||| ||| |  ||||||| |||||||||||||||||| ||||||||    
T  17815055 aaagcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactatctccactactc 17814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32161028 - 32160973
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaa 56  Q
    ||||||||||||||||||||| ||||||||  | ||||||||||| |||| |||||    
T  32161028 tcatcagaagcaagttcatcagaagcaagtctatcagaagctgtatatcaccagaa 32160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29138284 - 29138326
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctg 43  Q
    ||||||||||||||||||||| ||||||||| | |||||||||    
T  29138284 tcatcagaagcaagttcatcagaagcaagtttatcagaagctg 29138326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 30115799 - 30115857
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaag 88  Q
    ||||||||||||| || ||||||| |||| |||| |||||||||||||| |||||||||    
T  30115799 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaag 30115857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31118122 - 31118044
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaag 78  Q
    |||||| |||||||| ||  | ||||||||||| ||||||||| || ||||||| |||| |||| ||||||||||||||    
T  31118122 tcatcataagcaagtccactagaagcaagttcatcagaagctgcagttcatcaggagatgcaacataaagcttcaaaag 31118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 9398810 - 9398863
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  9398810 gagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactc 9398863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26784602 - 26784542
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||| ||||    
T  26784602 tcatcagaagcaagttcatcagaagctgaagatcaccagaagctgtagttcagcaggagat 26784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 41566323 - 41566364
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||| ||||||||||| ||||||||| |||||||||||||    
T  41566323 tcatcagaagcaagttcatcagaagctgaagatcatcagaag 41566364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 9e-54; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 22776178 - 22776383
Alignment:
Q  23 aagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagactt 121  Q
    ||||||||||| |||||||||||| ||||||| |||| |||| |||||||||||||| |||||||||| ||||  |||||   ||||||||| |||||||    
T  22776178 aagcaagttcatcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcct-aaaattgcaaaagactt 22776276  T
Q  122 ggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgca 220  Q
    | ||||| || ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  22776277 gaaaagtatagcaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 22776376  T
Q  221 ctactct 227  Q
     ||||||    
T  22776377 gtactct 22776383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 22781556 - 22781761
Alignment:
Q  23 aagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagactt 121  Q
    ||||||||||| |||||||||||| ||||||| |||| |||| |||||||||||||| |||||||||| ||||  |||||   ||||||||| |||||||    
T  22781556 aagcaagttcatcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcct-aaaattgcaaaagactt 22781654  T
Q  122 ggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgca 220  Q
    | ||||| || ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  22781655 gaaaagtatagcaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 22781754  T
Q  221 ctactct 227  Q
     ||||||    
T  22781755 gtactct 22781761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 31967941 - 31968138
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || |||||||||||| |||| |||||| ||||||| |||||||||||||||  ||||| | |||||||||||||||| | |||||     
T  31967941 tcaccagaagctgcagttcatcagaagatgcaacttaaagcctcaaaagttgtttcaaggattcaaactcgc-ataaaattgcagaagactggaaaagta 31968039  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    || ||||  ||||||||||| ||||||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  31968040 tagcaacaactattttgaaatgcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactct 31968138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44840665 - 44840439
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctc 99  Q
    |||||||||||||| |||||| |||||| |||| ||||||||| || ||||||  |||| |||| ||||||||||||||||||||||||||||||  |||    
T  44840665 tcatcagaagcaagatcatcagaagcaaattcatcagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactc 44840566  T
Q  100 gctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg 198  Q
    ||   || |||||||| ||||   ||||| |  ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  44840565 gcct-aacattgcaga-gactgaaaaagtatggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg 44840468  T
Q  199 aagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||| |||||||||    
T  44840467 aagtgtacaaccactatctccactactct 44840439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1586898 - 1587128
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||| ||||||||||| ||||  |   ||||||||||||| || ||||||| ||||  ||| |||||||||||||| ||||| |||||||||  |    
T  1586898 tcatcagaaacaagttcatcagaagctgagaatcaccagaagctggagttcatcaggagatggaacttaaagcttcaaaagttgtttaaaggattcaaac 1586997  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||    ||| |||||||||||||   ||||| | |||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  1586998 tcatctgaagattgcagaagactgaaaaagtattacaacggctattttgaaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgta 1587097  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||| |||||||||    
T  1587098 cgaagtgtacaaccactatctccactactct 1587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 28550816 - 28551013
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||  |||| | |||||||||||||||||||||||  |||||   |||||||||||||||| | |||||     
T  28550816 tcaccagaagctgcagttcatcaggagatgcaatttaaaacctcaaaagctgtttcaaggattcaaactcgcct-aaaattgcagaagactggaaaagta 28550914  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||  |||  ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  28550915 tagaaacaactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 28551013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 40332290 - 40332092
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctg-tttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||| || ||||||| ||||  |||| |||||||  ||||||| |||| ||||||||  |||||   |||||||||||||||| | |||||    
T  40332290 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttcaaagctgctttctaggattcaaactcgcct-aaaattgcagaagactggaaaagt 40332192  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     || ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| || || ||||||    
T  40332191 atagcaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccattactct 40332092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 22785553 - 22785750
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||  || ||||||| |||| |||| |||||||||||||||| |||||||  ||||  |||||   |||||||||||| ||| | || ||     
T  22785553 tcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagctatttcaagatttcaaactcgcct-aaaattgcagaaaactggaaatgta 22785651  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    || ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||| ||||||| ||||||||||| |||||||||    
T  22785652 tagcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacttttgtacaaagtgtataaccactatctccactactct 22785750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 225
Target Start/End: Complemental strand, 3277198 - 3277037
Alignment:
Q  65 taaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgctta 163  Q
    |||||||||||||| ||||| ||| |||||  || |   ||| |||||||||||||   ||||| |||||||||||| |||| || ||||||||||||||    
T  3277198 taaagcttcaaaagttgtttaaagaattcaaacttgtctgaagattgcagaagactgaaaaagtataacaacggctaatttggaaggcattggatgctta 3277099  T
Q  164 ttcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  3277098 ttcttcaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactatctccactact 3277037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 14581671 - 14581520
Alignment:
Q  76 aagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaagga 174  Q
    ||||||||||||||||| |  |||||   |||||||||||||||| | ||| | |  ||||| ||||||||||| ||||||||||||||||| |||| ||    
T  14581671 aagctgtttcaaggattaaaactcgcct-aaaattgcagaagactggaaaaatatggcaacgactattttgaaaggcattggatgcttattcttcaaaga 14581573  T
Q  175 gcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  14581572 gcgttgacatagtacgtttgtacgaagtgtacaaccactatctccacttctct 14581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 34321792 - 34322032
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||| ||||||||||  ||||||| |||| |||| |||||| ||||||||||||| |||||||||  |    
T  34321792 tcatcagaagcaagtttatcagaagctgagaatcactagaagctgtaattcatcaggagatgcaacttaaagcctcaaaagctgtttaaaggattcaaac 34321891  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || |||||||||| || | ||||| || ||||| ||||||||||| |         |||||||| ||||||| |||| ||||||||||||||    
T  34321892 tcgtcta-aagattgcagaagcctggaaaagtatagcaacgactattttgaaaggattgaaaggcattggattcttattcttcaaagagcgttgacatag 34321990  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    | |||||||| |||||||||||||||||||| ||||||||||    
T  34321991 tacgtttgtatgaagtgtacaaccactatcttcactactcta 34322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 23392534 - 23392750
Alignment:
Q  1 tcatcagaagcaa-gttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatcaacct-aaagcttcaaaagctgtttcaaggattcatgct 98  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||  || ||||||| | ||  | || |||| |||||||| ||||||||||| ||   ||    
T  23392534 tcatcagaagcaaagttcatcagaagcaagttcatcagaagctacagttcatcagtaaattgaactcaaagtttcaaaagttgtttcaaggactctaact 23392633  T
Q  99 cgc-tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||| |||||| || ||||||||| | ||||| |  ||||||||||||||||| |||||||||||||  | ||||| |||||||||| |||| |   ||||    
T  23392634 cgcctagaaa-ttacagaagactggaaaagtatggcaacggctattttgaaatgcattggatgctttcttctcaaagagcgttgacctagtacaactgta 23392732  T
Q  197 cgaagtgtacaaccacta 214  Q
    ||||||||||||||||||    
T  23392733 cgaagtgtacaaccacta 23392750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22802702 - 22802465
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctc 99  Q
    |||||||||| || ||||||| ||||||||| | ||||| ||| || ||||||| |||| |||| ||||| |||||||||| ||| | |||||||  |||    
T  22802702 tcatcagaagaaaattcatcagaagcaagtttatcagaacctgcagttcatcaggagatgcaacttaaagattcaaaagctatttaatggattcaaactc 22802603  T
Q  100 g-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaagcattg---------gatgcttattcctcaaggagcgttgacatagtg 188  Q
    | ||| || ||||||||||||| | || || || ||| ||||||||||||| |  |||         ||||||||||| |||| ||| ||||||| |||     
T  22802602 gtcta-aagattgcagaagactagaaaggtaaagcaatggctattttgaaaggatttgaaggcatatgatgcttattcttcaaagagagttgacaaagta 22802504  T
Q  189 cgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| || |||||||||    
T  22802503 cgtttgtacgaagtgtacaaccactacctccactactct 22802465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 30557339 - 30557417
Alignment:
Q  151 cattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    |||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  30557339 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactcta 30557417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 28711716 - 28711793
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||| | ||| |||||||||||||||||||||||||| || |||||||||    
T  28711716 gcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctccactactct 28711793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33074470 - 33074231
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||| ||||| ||||| ||||||| |||| |||| |||| ||||||||||||||| |||||||||  |    
T  33074470 tcatcagaagcaagtttatcagaagctgagaatcactagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagctgtttaaaggattcaaac 33074371  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||| |||||||| | ||         |||| ||||||||||| ||||  | ||||||||||     
T  33074370 tcgtcta-aagattgcagaagactggaaaagtatagcaacgactattttggacagattggaaggcattagatgcttattcttcaaaaaacgttgacataa 33074272  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | || |||||||||||||||||||||||||| |||||||||    
T  33074271 tacgattgtacgaagtgtacaaccactatctccactactct 33074231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 31800902 - 31800982
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||  || |||| ||||||||||| ||| | ||||||||||||||||||||||||||| |||||||||    
T  31800902 aaagcattggatgtttgatcttcaaagagcgttgacaaagtacatttgtacgaagtgtacaaccactatctccactactct 31800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 35744018 - 35744094
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||| ||||| |||| |||| ||||||||||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  35744018 gcattgaatgctaattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaactactatctccactactc 35744094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 19540496 - 19540422
Alignment:
Q  152 attggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| | || ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  19540496 attggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 19540422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 24377184 - 24377107
Alignment:
Q  149 agcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  24377184 agcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 24377107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 31327981 - 31328061
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| ||| |||| ||||||||||| |||  ||| | ||||||||||||||||||| || |||||||||    
T  31327981 aaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactct 31328061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 31334702 - 31334782
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| ||| |||| ||||||||||| |||  ||| | ||||||||||||||||||| || |||||||||    
T  31334702 aaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactct 31334782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22785506 - 22785549
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgt 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  22785506 tcatcagaagcaagttcatcaaaagcaagttcatcagaagctgt 22785549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 6392716 - 6392638
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||  ||||||||| || |||||||||    
T  6392716 gcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgcgcaaccactacctccactactct 6392638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 13963996 - 13964072
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  13963996 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 18376924 - 18377000
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  18376924 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 18377000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 20152053 - 20152117
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||    
T  20152053 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 23235089 - 23235013
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||||| |  | ||| ||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  23235089 gcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 23235013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 25829216 - 25829140
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  25829216 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 25829140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 45087202 - 45087266
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||| |||||||||||   || ||||||||||| ||| ||||||||||||||||||||||||||    
T  45087202 gcattagatgcttattctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 45087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 10009765 - 10009844
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | || |||||||||||| |  ||||||||| |||||||||||||||| ||||||||    
T  10009765 aaagcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactatctccactactc 10009844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 23184184 - 23184227
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  23184184 tcatcagaagcaagttcaccagaagctgaagatcatcagaagat 23184227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 23595441 - 23595484
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  23595441 tcatcagaagcaagttcaccagaagctgaagatcatcagaagat 23595484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 28701247 - 28701322
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| | ||||||||| |||  |||||||||||||||||||||| || || |||||||    
T  28701247 gcattggatgcttgttcttcaaagggcgttgacaaagtaagtttgtacgaagtgtacaaccattacctccactact 28701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 40782562 - 40782492
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
    ||||||||||||| || ||| |  | ||||||||||||||| |  ||||||||||||||||||||||||||    
T  40782562 aaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 40782492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 21537289 - 21537342
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  21537289 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 21537342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 22317675 - 22317602
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||| || |||||    
T  22317675 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtatacaaccactacctccacta 22317602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 30667048 - 30666995
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  30667048 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 30666995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 9015385 - 9015462
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||| |  | ||||||||||| ||| |  |||||||  ||||||||||||||||| ||||||||    
T  9015385 aaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gtgtacaaccactatctccactactc 9015462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 20568768 - 20568844
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||  ||||||||    
T  20568768 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatccccactactc 20568844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30557145 - 30557185
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  30557145 tcatcagaagcaagttcatcaaaagcgagttcatcagaagc 30557185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 19115123 - 19115088
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  19115123 ttgtacgaagtgtacaaccactatctccactactct 19115088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 26619161 - 26619196
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  26619161 ttgtacgaagtgtacaaccactatctccactactct 26619196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 44881207 - 44881172
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  44881207 ttgtacgaagtgtacaaccactatctccactactct 44881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 6574141 - 6574219
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgt-ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| || ||| |||| ||||||||||| ||| |   ||||||||||||||||||||||| || |||||||||    
T  6574141 gcattggatgtttgttcttcaaagagcgttgacaaagtacaaattgtacgaagtgtacaaccactacctccactactct 6574219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 22188162 - 22188196
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  22188162 ttgtacgaagtgtacaaccactatctccactactc 22188196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 38781481 - 38781403
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    |||||| ||| || ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||  | ||||||||||    
T  38781481 gcattgaatgattgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacatccactactcta 38781403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 1084220 - 1084155
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaa-agctgtttcaaggattca 94  Q
    ||||||||| |||||| |||||||||||| |||||||||  |||||| |||||||| |||||||||    
T  1084220 tcaccagaaactgtagttcatcagaagatgcaacctaaactttcaaatagctgtttaaaggattca 1084155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 30621275 - 30621222
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  30621275 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 30621222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 30623896 - 30623843
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  30623896 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 30623843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 39037683 - 39037736
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||    
T  39037683 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 39037736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22317855 - 22317799
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||| |||||||||||||| |||||||| || ||||||||| | |||| ||||||    
T  22317855 tcatcataagcaagttcatcataagcaagtacatcagaagctgaaaatcaccagaag 22317799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 25037301 - 25037353
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||| ||| |  |||| ||||||||||||||||||||| ||||||||    
T  25037301 agcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactc 25037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 25041408 - 25041460
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||| ||| |  |||| ||||||||||||||||||||| ||||||||    
T  25041408 agcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactc 25041460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 28140630 - 28140713
Alignment:
Q  142 tttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||| |||||||||||| ||| |  | ||||||||||||||| |  |||||| |||||||| | |||||||| ||||||||    
T  28140630 tttgaaaa-cattggatgcttgttctttgaagagcgttgacatagtacaattgtacaaagtgtaccatcactatctccactactc 28140713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30557175 - 30557254
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaa 77  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || |||||||| ||| |||| ||| |||||||||    
T  30557175 tcatcagaagcaagttcatcagaagctaaatatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaa 30557254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35743843 - 35743899
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||||| | | ||||||| | |||| ||||||    
T  35743843 tcatcagaagcaagttcatcagaagcaagtttatcggaagctgaaaatcaccagaag 35743899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 10928 - 10744
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaa-attgcagaagacttggaaagtt 129  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||| |||| | ||||| ||||||||||||||||||||||    
T  10928 tcaccagaagctgcagattatcataagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcaccagaaagattgcagaagacttggaaagtt 10829  T
Q  130 aacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
     ||||||| || |||||||||||| ||||||||  ||||||| ||||||||||||  || || |||||||| |||||||||||||    
T  10828 gacaacggatagtttgaaaagcataggatgctttatcctcaaagagcgttgacattatgagtatgtacgaactgtacaaccacta 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 20829 - 20645
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaa-attgcagaagacttggaaagtt 129  Q
    ||||||||||||| |||| |||| |||||||| ||||||||||||||| ||||||||||||||| |||| | ||||| ||||||||||||| ||||||||    
T  20829 tcaccagaagctgcagattatcataagatcaatctaaagcttcaaaagttgtttcaaggattcaagctcaccagaaagattgcagaagactaggaaagtt 20730  T
Q  130 aacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
     |||||||||| |||||||||||||||||||||  ||||||| |||| ||||||| ||| || |||| ||| ||||| |||||||    
T  20729 gacaacggctagtttgaaaagcattggatgctttatcctcaaagagcattgacattgtgagtatgtaagaactgtactaccacta 20645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1626 - 1855
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaag--ttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||||| |||||||     |||||||||||||  || ||||||| |||| |||| |||||||||||||| |||||||||||||||  |    
T  1626 tcatcagaagcaagttcaccaaaagctgtgtttcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaac 1725  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||||   || ||||||||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| | ||||||||    
T  1726 tcgcct-aacattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatattacgtttgta 1824  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||| |||||||||    
T  1825 cgaagtgtacaaccactatctccactactct 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 533 - 755
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgca 113  Q
    |||||| ||||||||||| |||||| || || ||||||| |||| |||| |||||||||| ||||||||| | |||||||  |||| ||| || ||||||    
T  533 tcatcagaagcaagttcatcagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttgatggattcaaactcgtcta-aagattgca 631  T
Q  114 gaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtg 203  Q
    ||||||| | ||||| || ||||| ||||||||||| |         |||||||||||| ||| |||| ||||||||||| ||| ||||||||| |||||    
T  632 gaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtg 731  T
Q  204 tacaaccactatctgcactactct 227  Q
    ||||||||||| || |||||||||    
T  732 tacaaccactacctccactactct 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14425683 - 14425454
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaag--ttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||||| ||||||      |||||||||||||  || ||||||| |||| |||| |||||||||||||| |||||||||||||||  |    
T  14425683 tcatcagaagcaagttcancaaaagntgtgtttcaccagaagctanagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaac 14425584  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||||   || ||||||||||||| |  |||| |  ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| | ||||||||    
T  14425583 tcgcct-aacattgcagaagactgganaagtatggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatattacgtttgta 14425485  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||| |||||||||    
T  14425484 cgaagtgtacaaccactatctccactactct 14425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 19339174 - 19339401
Alignment:
Q  4 tcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcg 100  Q
    |||||||||||||||||| ||||   || ||||||||||||| || ||||||| ||||  ||| ||||| ||||||| |||||||||||| ||   ||||    
T  19339174 tcagaagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggagattgaacttaaagtttcaaaacctgtttcaaggactctaactcg 19339273  T
Q  101 ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacga 199  Q
    |   || ||||||||||||| | ||||| |  ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  19339274 cctaaagattgcagaagactggaaaagtgtggcaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacga 19339373  T
Q  200 agtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| || |||||||||    
T  19339374 agtgtacaaccactacctccactactct 19339401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27871956 - 27871725
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||| || ||||||| | || |||| |||||||||||||| |||||||||||||||      
T  27871956 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagctgcagttcatcaggaaatgcaacttaaagcttcaaaagttgtttcaaggattcaaa 27871858  T
Q  97 ctcgc-tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaagga-gcgttgacatagtgcgttt 193  Q
     || | |||||| ||||||||| || | | ||| |  ||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||| |||||    
T  27871857 ttcacctagaaa-ttgcagaagtctggaatagtatggcaacggctattttgaaatgcattggatgcttattcttcaaagaagcgttgacatagtacgttt 27871759  T
Q  194 gtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||| || |||||||||    
T  27871758 gtacgaagtgtacaaccactacctccactactct 27871725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 48062773 - 48062971
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgc-tagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||| || ||||||  |||| |||| |||||||||||||| ||||||||| |||||  ||||| |||||| |||  ||||||| | |||||    
T  48062773 tcaccagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagttgtttcaagaattcaaactcgcctagaaa-ttgtcgaagactggaaaagt 48062871  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     |  ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||| || ||||||    
T  48062872 atggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagcgtacaaccactatctccattactct 48062971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 1293188 - 1293037
Alignment:
Q  76 aagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaagg 173  Q
    |||||||||||||||||||  |||| ||  ||||||||| |||||| | ||||| || ||||  ||||||||||| ||||||||||||||||| |||| |    
T  1293188 aagctgtttcaaggattcaaactcgact--aaaattgcaaaagactggaaaagtatagcaacaactattttgaaaggcattggatgcttattcttcaaag 1293091  T
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1293090 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 1293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 24794703 - 24794866
Alignment:
Q  66 aaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgctta 163  Q
    |||| |||||||| ||||||||||| ||   |||| |||| ||||||||||||||| | ||||| |  ||||||||||||||||| ||||||||||||||    
T  24794703 aaagtttcaaaagttgtttcaaggactctaactcgcctag-aaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgctta 24794801  T
Q  164 ttcctc-aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||  | |||||||||    
T  24794802 ttcctcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactct 24794866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 211
Target Start/End: Original strand, 32264670 - 32264853
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgc-tagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||| || ||||||| |||| | || |||||||||||||| | |||||||||||||  ||||| |||||| |||||||||||| | |||||    
T  32264670 tcaccagaagctgcagttcatcaggagatgcgacttaaagcttcaaaagttatttcaaggattcaaactcgcctagaaa-ttgcagaagactggaaaagt 32264768  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctc-aaggagcgttgacatagtgcgtttgtacgaagtgtacaacca 211  Q
     |  ||||||||||||||||| |||||||||| |||||| || ||| |||||||||||||| |||||||||  ||||||||||||    
T  32264769 atggcaacggctattttgaaatgcattggatgtttattcttcaaagaagcgttgacatagtacgtttgtacagagtgtacaacca 32264853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 4411915 - 4412113
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    ||||||||||||| || ||||| | ||||  ||| ||||| |||||||||||||||||||| ||   |||| |||| ||||||||||||||| |  ||||    
T  4411915 tcaccagaagctgcagttcatctggagattgaacttaaagtttcaaaagctgtttcaaggactctaactcgcctag-aaattgcagaagactggagaagt 4412013  T
Q  129 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     | ||||||||||  ||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||||||||||||  | |||||||||    
T  4412014 atgacaacggctaacttgaaaagcattggatgcttaattctcaaagagcgttgacattgtgcgtctgtacgaactgtacaaccactacttccactactct 4412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 21381381 - 21381580
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| ||||  ||| || || |||||||| ||||||||||| ||   |||||   || ||||||||||||| | |||||     
T  21381381 tcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgtttcaaggactctaactcgcctaaagattgcagaagactggaaaagtg 21381480  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg-aagtgtacaaccactatctgcactactct 227  Q
    |  ||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||| |||||| || |||||||||||||  | |||||||||    
T  21381481 tggcaacggctattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtctgtacgaaaatgtacaaccactacttccactactct 21381580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 14426776 - 14426554
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgca 113  Q
    |||||| ||||||||||| |||||| || || ||||||| |||| |||| |||||||||| ||||||||| | |||||||  |||  ||| || ||||||    
T  14426776 tcatcagaagcaagttcatcagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttaatggattcaaactcatcta-aagattgca 14426678  T
Q  114 gaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtg 203  Q
    ||||||| | ||||| || ||||| ||||||||||| |         |||||||||||| ||| |||| ||||||||||| ||| ||||||||| |||||    
T  14426677 gaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtg 14426578  T
Q  204 tacaaccactatctgcactactct 227  Q
    ||||||||||| || |||||||||    
T  14426577 tacaaccactacctccactactct 14426554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 4821719 - 4821481
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||| ||| ||||  ||  ||||||||||||| || ||||| | |||| |||| |||||||||||||||||||| |   |||||  |    
T  4821719 tcatcagaagcaagttcgtcagaagctgaaaatcaccagaagctgcagttcatccggagatacaacttaaagcttcaaaagctgtttaacaaattcaaac 4821620  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaa--------gcattggatgcttattcctcaaggagcgttgacatagt 187  Q
    ||| ||| || ||| ||||||||| | |||||  | |||||||||||||||||         ||||||||||||| ||| |||| ||||||||| | |||    
T  4821619 tcgtcta-aagattacagaagactagaaaagtggagcaacggctattttgaaagatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagt 4821521  T
Q  188 gcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     |||||||||||||||||||||||||| || |||||||||    
T  4821520 acgtttgtacgaagtgtacaaccactacctccactactct 4821481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 8183008 - 8182937
Alignment:
Q  156 gatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| |||| ||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||    
T  8183008 gatgcttattcttcaaagagcgttgacataatacgtctgtacgaagtgtacaaccactatctccactactct 8182937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 48805935 - 48806030
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||||||| ||||||||||||  ||| |||| ||||||||||||||| |||| |||| ||||||||||||||||  | |||||||||    
T  48805935 caacggctagtttgaaatgcattggatgctatttcttcaaagagcgttgacatagtacgttcgtacaaagtgtacaaccactacttccactactct 48806030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 2265600 - 2265670
Alignment:
Q  157 atgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| || |||| ||||    
T  2265600 atgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactgctct 2265670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 29935429 - 29935507
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||||||||| ||| | || ||||||||||||||| |  |||||||||||||||||||||||||| |||||||    
T  29935429 aaagcattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 29935507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 16111958 - 16112035
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  16111958 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 16112035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19711087 - 19711164
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| | |||| |||| |||||| ||| ||||||||||||||||||||||||||| | |||||||||    
T  19711087 gcattggatgcttatccttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactatttccactactct 19711164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 23280032 - 23280109
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  23280032 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 23280109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 30945430 - 30945505
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| |||||||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||    
T  30945430 gcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 30945505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 33605769 - 33605694
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| ||||||||||| ||| || ||||||||||||||||||||||| || |||||||    
T  33605769 gcattggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactaccttcactact 33605694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 12174414 - 12174479
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||||||||||||||||    
T  12174414 gcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 12174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 30944397 - 30944474
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||||||||||| | | |  ||||||||||||||||||||||| || |||||||||    
T  30944397 gcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactct 30944474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 35952762 - 35952839
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| || ||| |||| ||||||||||| ||| |||||||||||||||||||||||||| || || ||||||    
T  35952762 gcattggatgtttgttcatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccattactct 35952839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 15704445 - 15704620
Alignment:
Q  33 accagaagctgtagatcatcagaagatcaacct-aaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt-t 129  Q
    |||||||| ||||| |||||||||||| || || ||||||||||||||||||| | |||||||  |||| ||| || ||||||||||||| | ||||| |    
T  15704445 accagaagttgtagttcatcagaagatgaaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aagattgcagaagactggaaaagtat 15704543  T
Q  130 aacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtac 197  Q
    | ||||| |||||||| || |         |||||||||||||||| |||| ||||||||||||||| |||||||||    
T  15704544 agcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 15704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 16309981 - 16310057
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  16309981 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctacactactc 16310057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 13648790 - 13648737
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  13648790 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 13648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 21283447 - 21283524
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||  |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  21283447 gcattggatgcttgttattcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 21283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 28409123 - 28409046
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  28409123 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 28409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39284475 - 39284535
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||  ||| ||||||||||||| |||||||||||||||    
T  39284475 tcatcagaagcaagttcatcagaagctgaagatcaccagaagctgaagatcatcagaagat 39284535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 48236982 - 48237051
Alignment:
Q  156 gatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||    
T  48236982 gatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 48237051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 2913682 - 2913758
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  2913682 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 2913758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 9069646 - 9069570
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||| |||||| ||| ||||||||| |||||| ||| |  ||||||||||||||||||||||| || ||||||||    
T  9069646 gcattgtatgcttgttcttcaaggagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 9069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 13880188 - 13880112
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||| ||||||||||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  13880188 gcattagatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 5000893 - 5000972
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||| |||||| ||| |  | || |||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  5000893 aaagcattgaatgcttgttctttgaagaacgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 5000972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 15088603 - 15088528
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  15088603 cattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 15088528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16316632 - 16316707
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||| ||| |  | ||||||||| ||||| |  |||||||||||||||||||||||||| ||||||||    
T  16316632 cattggatgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactatctccactactc 16316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28622268 - 28622353
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtt 83  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| |||| |||||||||||||| ||||    
T  28622268 tcatcagaagcaagttcatcataagctaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtt 28622353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48236814 - 48236899
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtt 83  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| |||| |||||||||||||| ||||    
T  48236814 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtt 48236899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 13018602 - 13018655
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  13018602 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 13260686 - 13260763
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||||||||| ||| |  | |||| |||| ||||| |  |||||||||||||||||||||||||| ||||||    
T  13260686 aaagcattggatgcttgttcttggaagagcattgagatagtacaattgtacgaagtgtacaaccactatctccactac 13260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 15468000 - 15467923
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||| ||||||||||| || || |||||||||    
T  15468000 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctccactactct 15467923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19237117 - 19237194
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| | | |  || |||||||||||||||||||| || |||||||||    
T  19237117 gcattggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccactacctccactactct 19237194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 44467148 - 44467071
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| | || ||| ||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  44467148 gcattggatgcttgttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 44467071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4428984 - 4429040
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||  |||| ||||||    
T  4428984 tcatcagaagcaagttcatcagaagcaaattcatcagaagctgtttatcaccagaag 4429040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 13137969 - 13138045
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| || |||||    
T  13137969 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactc 13138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 13730749 - 13730825
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||| ||||| ||||||||    
T  13730749 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactc 13730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 33691792 - 33691863
Alignment:
Q  156 gatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||| |||| ||||||||||| ||| |  |||||||||||||| |||||||| || |||||||||    
T  33691792 gatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactct 33691863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 41842372 - 41842423
Alignment:
Q  175 gcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||| ||| |  ||||||||||||||||||||||| |||||||||||    
T  41842372 gcgttgacagagtacaattgtacgaagtgtacaaccactacctgcactactc 41842423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 331728 - 331655
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||||||||| |||||  |||||||||| ||| |   |||||||||||||||||||||| || ||||||    
T  331728 gcattggatgcttattgctcaaa-agcgttgacaaagtacaaatgtacgaagtgtacaaccactacctccactac 331655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 11792994 - 11792924
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
    |||||||| ||||||| ||| |  | ||||||||||| ||| |  ||||||||||||||||||||||||||    
T  11792994 aaagcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 11792924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12174252 - 12174337
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagatcaacctaaagcttcaaaagctgttt 84  Q
    |||||||||||||||| |||| ||||  ||  ||||||||||||| || |||||||| |||  | || ||||||||||||||||||    
T  12174252 tcatcagaagcaagtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaagcttcaaaagctgttt 12174337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 22578118 - 22578172
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  22578118 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 22578172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 19710955 - 19711020
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaa-agctgtttcaaggattca 94  Q
    ||||||||| |||||| |||||||||||| |||||||||| |||||| |||||||| | |||||||    
T  19710955 tcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagctgtttaatggattca 19711020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 24788225 - 24788148
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||| ||||| ||| |||| |||  |||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  24788225 gcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 24788148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 30945285 - 30945346
Alignment:
Q  16 tcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaa 76  Q
    |||||| ||||||||||| ||||||||| || ||||||| |||| |||| ||||||||||||    
T  30945285 tcatcagaagcaagttcatcagaagctgcagttcatcaggagatgcaacttaaagcttcaaa 30945346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 39284661 - 39284714
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||    
T  39284661 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 39284714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48805785 - 48805826
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagct 42  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||    
T  48805785 tcatcagaagcaagttcatcagaagaaagttcatcagaagct 48805826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 602847 - 602772
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||  |||||| || ||||||| | ||| ||||||||||| |||||||||||  || |||||||||    
T  602847 cattggatgcttatctctcaag-agagttgacaaaatgcatttgtacgaagcgtacaaccacttcctccactactct 602772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8183190 - 8183134
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||| | ||||||||||| || |||||||  |||| ||||||    
T  8183190 tcatcagaagcaagttcattagaagcaagttcatcaaaagctgtgaatcaccagaag 8183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9069825 - 9069769
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||||||||||||| |||| || |||||||| ||||||||| | |||| ||||||    
T  9069825 tcatcagaagcaagtttatcagaaacaagttcatcagaagctgaaaatcaccagaag 9069769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 9709876 - 9709940
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||| ||||||| ||| |||| ||||||||||||||| |   ||||||||||||| ||||||||    
T  9709876 gcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccacta 9709940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 21692371 - 21692295
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  ||||| ||||||||||||||||| || ||||||||    
T  21692371 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactc 21692295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 6407926 - 6407729
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| |||| |||| |||||||||||||||||||| |||||||||  |||| |  || ||||||||||||| | |||||     
T  6407926 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaaaggattcaaactcg-tctaagattgcagaagactggaaaagta 6407828  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||||||||| || |||||||||||| |||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  6407827 ttacaacggctattttggaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttctacgaagtgtacaaccactatctccactactct 6407729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 14989369 - 14989599
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||| |  ||||||| |||| |||| ||||||||||||||| |||| |||||||||      
T  14989369 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagccgtttaaaggattcaaa 14989467  T
Q  97 ctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    ||||   ||| ||||| ||||| | | ||||| |||||||||||| |||| || ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  14989468 ctcgtctgaagattgctgaagattggaaaagtataacaacggctaatttggaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 14989567  T
Q  196 acgaagtgtacaaccactatctgcactactct 227  Q
    ||||| |||||||||||||||| |||||||||    
T  14989568 acgaattgtacaaccactatctccactactct 14989599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 43639984 - 43639786
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    |||||||||| || || ||||||  |||| |||| |||||||||||||| |||||||||||||||  |||||   ||||||||| |||||| | |||||     
T  43639984 tcaccagaagatgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcaaaagactggaaaagta 43639885  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||| ||||||||||| |||||| |||||||||  |||| ||||||||||||  | |||||| |||||||||||||||||||||| |||||||||    
T  43639884 tgacaacgactattttgaaaggcattgaatgcttatttttcaaagagcgttgacatgttacgtttgcacgaagtgtacaaccactatctccactactct 43639786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13430545 - 13430776
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagatc-aacctaaagctt-caaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||   || ||||||||||||  || ||||||| ||||  ||| ||||| || |||||||||||||||||| ||       
T  13430545 tcatcagaagcaagttcatcagaagctgtgtatcaccagaagctacagttcatcaggagatggaacttaaagttttcaaaagctgtttcaaggactctaa 13430644  T
Q  97 ctcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttg 194  Q
    |||| |||| ||||||||||||| | | ||||| | |||||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||| ||||||    
T  13430645 ctcgcctag-aaattgcagaagattagaaaagtatgacaacggctattttgaaacgcattggatgcttattcttcaaagagtgttgacatagtacgtttg 13430743  T
Q  195 tacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||  | |||||||||    
T  13430744 tacgaagtgtacaaccactacttccactactct 13430776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21301255 - 21301025
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagatcaacct-aaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||   || ||||||||||||| || ||||||| | ||  | || |||| ||||||||||||||||| || ||   |    
T  21301255 tcatcagaagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaatgactctaac 21301156  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||||   || ||||||||||| | | ||||| |  ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  21301155 tcgcctaaagattgcagaagattggaaaagtatggcaacggctattttgaaatgcattggatgcttactcctcaaagagcgttgacatagtacgtttgta 21301056  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||||||||||  | |||||||||    
T  21301055 caaagtgtacaaccactacttccactactct 21301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 18151674 - 18151794
Alignment:
Q  108 attgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtac 206  Q
    ||||||||||||| | ||||| |||||||| ||| |||| || ||||||||||||||||| |||| |||| |||||||||| |||||||||||| |||||    
T  18151674 attgcagaagactggaaaagtataacaacgactaatttggaaggcattggatgcttattcttcaaagagcattgacatagtacgtttgtacgaattgtac 18151773  T
Q  207 aaccactatctgcactactct 227  Q
    ||||||||||| |||||||||    
T  18151774 aaccactatctccactactct 18151794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 21288526 - 21288419
Alignment:
Q  108 attgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtac 206  Q
    ||||||||||||| | ||||| |  ||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  21288526 attgcagaagactggaaaagtatggcaacggctattttgaaatgtattggatgcttactcctcaaagagcgttgacatagttcgtttgtacgaagtgtac 21288427  T
Q  207 aaccacta 214  Q
    ||||||||    
T  21288426 aaccacta 21288419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 22674020 - 22673783
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  ||| |||||||||| ||||| ||||| | |||| |||| |||||||||||||| ||||| | |||||||  |    
T  22674020 tcatcagaagcaagtttatcagaagctgaagatcaccagaagttgtagttcatccggagatgcaacttaaagcttcaaaagttgtttaacggattcaaac 22673921  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagt 187  Q
    |||   | | ||||||||||||| | ||||| || ||||  |||||||| || |         |||||||||||||||| |||| |||||||||||||||    
T  22673920 tcgtctggagattgcagaagactagaaaagtatagcaacatctattttggaaggattagaagacattggatgcttattcttcaaagagcgttgacatagt 22673821  T
Q  188 gcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
     ||||||||||||||||||||||||||||| |||||||    
T  22673820 acgtttgtacgaagtgtacaaccactatctccactact 22673783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15335997 - 15336236
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||| ||||| | ||| |||  |    
T  15335997 tcatcagaagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaac 15336096  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || |||||||||||||  |||||| || ||||| ||||||||||| |         |||||||||||||||| |||| ||||||||||| ||    
T  15336097 tcgtcta-aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaag 15336195  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||||||||| || |||||||||    
T  15336196 tacgtttgtacgaagtgtacaaccactacctccactactct 15336236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15425062 - 15425301
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||| ||||| | ||| |||  |    
T  15425062 tcatcagaagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaac 15425161  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || |||||||||||||  |||||| || ||||| ||||||||||| |         |||||||||||||||| |||| ||||||||||| ||    
T  15425162 tcgtcta-aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaag 15425260  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||||||||| || |||||||||    
T  15425261 tacgtttgtacgaagtgtacaaccactacctccactactct 15425301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15516366 - 15516605
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||| ||||| | ||| |||  |    
T  15516366 tcatcagaagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaac 15516465  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || |||||||||||||  |||||| || ||||| ||||||||||| |         |||||||||||||||| |||| ||||||||||| ||    
T  15516466 tcgtcta-aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaag 15516564  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||||||||| || |||||||||    
T  15516565 tacgtttgtacgaagtgtacaaccactacctccactactct 15516605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 22663358 - 22663118
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| || | ||||  ||| |||| ||||| ||||| |||| || |||| |||| |||||||||||||||||||| | |||||||  |    
T  22663358 tcatcagaagcaagtttattagaagctgaagatcactagaagttgtagttcattaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaac 22663259  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagt 187  Q
    |||   ||| ||||||||||||| | ||| | || ||||  |||||||| ||||         |||||||||||||||| |||| |||||||||||||||    
T  22663258 tcgtctgaagattgcagaagactggaaaaatatagcaacaactattttggaaagattagaagacattggatgcttattcttcaaagagcgttgacatagt 22663159  T
Q  188 gcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
     ||||||||||||||||||||||| ||||| ||||||||||    
T  22663158 acgtttgtacgaagtgtacaaccaatatctccactactcta 22663118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 40845297 - 40845535
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc-aagt-tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| |||| |||  |||||||||||| ||| ||||||| |||| || | |||||||||||||| ||||| |||||||||  |    
T  40845297 tcatcagaagcaagtttatcagaagctaagactcaccagaagctatagttcatcaggagatgcagcttaaagcttcaaaagttgttt-aaggattcaaac 40845395  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||| |||||||| || |         |||||||||||||||| |||| ||||||||||||||    
T  40845396 tcgtcta-aagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaggcattggatgcttattcttcaaagagcgttgacatag 40845494  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | || |||||||||||||||||||||||||| |||||||||    
T  40845495 tacgattgtacgaagtgtacaaccactatctccactactct 40845535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 36105437 - 36105198
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  ||  |||||||||||| ||| ||||||| |||| |||| |||||||||||||||||||| | |||||||  |    
T  36105437 tcatcagaagcaagtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaac 36105338  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttg---------aaaagcattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||| | | ||||| |||||||||||||||||          || |||||||||| |||||| |||| ||||||||| ||||    
T  36105337 tcgtcta-aagattgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatag 36105239  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||| |||||||||||||||| || |||| ||||    
T  36105238 tacgtttgtacaaagtgtacaaccactacctccactgctct 36105198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 33560277 - 33560359
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||| ||||||| |||||||||||| |||| |||| ||||||||||||| | ||||||||||||||||||||||||||    
T  33560277 caacggctagtttgaaatgcattggatgctaattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccacta 33560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 24551354 - 24551279
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| ||||||| ||||||| |||||||||||||||||||||||||| || |||||||    
T  24551354 gcattggatgcttgttcttcaaagagcgttaacatagtacgtttgtacgaagtgtacaaccactacctccactact 24551279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 16207386 - 16207309
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  |||||||||||||||||||||||||| |||||||||    
T  16207386 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 16207309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 16189064 - 16188988
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||||| || | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  16189064 gcattggatgcttattcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 16188988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 24833127 - 24833206
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||| ||||||||  |||||||||||| || |||||||||||||||||||||||||| || || |||||||    
T  24833127 gcattggatgcttgttcctcaaaagagcgttgacatggtacgtttgtacgaagtgtacaaccactacctccattactcta 24833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 17797502 - 17797425
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  17797502 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 17797425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 23185297 - 23185374
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||| ||||    
T  23185297 gcattggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactgctct 23185374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 45538511 - 45538587
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||| ||| |||| ||||||||||| |   |||||||||||||||||||||||||| || |||||||||    
T  45538511 cattggatgcttgttcttcaaagagcgttgacaaatcacgtttgtacgaagtgtacaaccactacctccactactct 45538587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 602788 - 602867
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  602788 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 602867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 18679898 - 18679819
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||||||| |  ||||||||||||||||||||||||||  |||||||    
T  18679898 aaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactc 18679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 18719084 - 18719005
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | |||||||| |||||| |  |||||||||||||||||||||||||| ||||||||    
T  18719084 aaagcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactc 18719005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 39693618 - 39693539
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  39693618 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 39693539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 9320649 - 9320571
Alignment:
Q  150 gcattggatgcttattcctcaag-gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| ||||  ||||||||||| |||   |||||||||||||||||||||||| || |||||||||    
T  9320649 gcattggatgcttattcttcaaaagagcgttgacaaagtatatttgtacgaagtgtacaaccactacctccactactct 9320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 17441876 - 17441954
Alignment:
Q  148 aagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||||||| |  | ||||||||||| ||| |  |||||| ||||||||||||||||||| ||||||||    
T  17441876 aagcattggatgcttattctttgaagagcgttgacaaagtacaattgtactaagtgtacaaccactatctccactactc 17441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 1745258 - 1745162
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacg-aagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||||||| |||||||||||| || | |||| | ||||||||||||| ||| |||||| ||||||||||| ||||  | |||||||||    
T  1745258 caacggctagtttgaaatgcattggatgctaatacttcaaagtgcgttgacatagtacgtctgtacgaaagtgtacaacaactacttccactactct 1745162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 12757834 - 12757910
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  12757834 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12757910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22674035 - 22673979
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| |||||| ||||||    
T  22674035 tcatcagaagcaagttcatcagaagcaagtttatcagaagctgaagatcaccagaag 22673979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 24646418 - 24646342
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||||| |  | ||| ||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  24646418 gcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 24646342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 17525797 - 17525876
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  |||||| ||||||||||||||||||| ||||||||    
T  17525797 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcttcactactc 17525876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 20382488 - 20382538
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcacta 223  Q
    ||||||||||||||| |  |||||||||||||||||||||||||| |||||    
T  20382488 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccacta 20382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 23263683 - 23263757
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||| || ||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||    
T  23263683 gcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccactacctccactac 23263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 1237717 - 1237640
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||  || ||| |||| ||||||||||| ||| | ||||| |||||||||||||||||| || |||||||||    
T  1237717 gcattggatatttgttcttcaaagagcgttgacaaagtacttttgtgcgaagtgtacaaccactacctccactactct 1237640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 45567972 - 45568049
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||| |||| | |||| ||||||||||| ||| | | |||||||||||||| ||||||| || |||||||||    
T  45567972 gcattggatgattatccttcaaagagcgttgacaaagtacttctgtacgaagtgtacgaccactaccttcactactct 45568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 16681397 - 16681441
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||    
T  16681397 gagcgttgacatagtacaattgtacgaagtgtacaaccactatct 16681441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17797679 - 17797623
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||| | |||| ||||||    
T  17797679 tcatcagaagcaaattcatcagaagcaagttcatcagaagctgaaaatcaccagaag 17797623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 19156276 - 19156200
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  ||||||||| |||||||||||||||| ||||||||    
T  19156276 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactc 19156200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9320812 - 9320726
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgttt 84  Q
    |||||||||||||||| |||| ||||  ||  ||||||||||||| || |||||||| ||| |||| ||| ||||||||||||||||    
T  9320812 tcatcagaagcaagtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgttt 9320726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 17267557 - 17267478
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||| ||||||| ||| |  | |||| |||||||||| |  ||||||||| |||||||||||||||| ||||||||    
T  17267557 aaagcattagatgcttgttctttgaagagcattgacatagtacaattgtacgaattgtacaaccactatctccactactc 17267478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 18685510 - 18685545
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  18685510 ttgtacgaagtgtacaaccactatctccactactct 18685545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 18722759 - 18722794
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  18722759 ttgtacgaagtgtacaaccactatctccactactct 18722794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 18731104 - 18731139
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  18731104 ttgtacgaagtgtacaaccactatctccactactct 18731139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23185135 - 23185213
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaa 76  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| |||| ||||||||||||    
T  23185135 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaa 23185213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17797664 - 17797579
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtt 83  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| |||| |||||| ||||||| ||||    
T  17797664 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgcaacttaaagcctcaaaagttgtt 17797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18680057 - 18679999
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| |||| |||||||  |  ||||||||||||    
T  18680057 tcatcagaagcaagttcatcagaagcaagatcactagaagcttcatttcatcagaagat 18679999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 25164108 - 25164074
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  25164108 ttgtacgaagtgtacaaccactatctccactactc 25164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 45292876 - 45292842
Alignment:
Q  180 gacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    |||||||| ||||||||||||||||||||||||||    
T  45292876 gacatagtacgtttgtacgaagtgtacaaccacta 45292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 17914516 - 17914463
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  17914516 gagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactc 17914463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 30421369 - 30421422
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtt 83  Q
    ||||||||||||| || |||||||||||| |||| |||||||||||| ||||||    
T  30421369 tcaccagaagctgcagttcatcagaagatgcaacataaagcttcaaaggctgtt 30421422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 18321230 - 18321306
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | | ||||||||| ||| |  |||||||||||||||||||| ||||| ||||||||    
T  18321230 gcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactc 18321306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 21932963 - 21932887
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||| |||||| ||  |||| ||||||||||| |||    ||||||||||||||||||||||| || ||||||||    
T  21932963 gcattgtatgcttgtttttcaaagagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactc 21932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21933142 - 21933086
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    |||||||||| ||||| |||| ||||||||||| ||||||||| | |||| ||||||    
T  21933142 tcatcagaaggaagtttatcagaagcaagttcatcagaagctgaaaatcaccagaag 21933086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 33082937 - 33082873
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccacta 214  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||||||||    
T  33082937 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36105467 - 36105427
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||| ||||||||||| |||||||    
T  36105467 tcatcagaagcaaggtcatcagaagcaagttcatcagaagc 36105427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39693793 - 39693738
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||| ||||||||||||||||| | ||| ||||||||| |||||| ||||||    
T  39693793 tcatcagaaacaagttcatcaaaagcatg-tcatcagaagctgaagatcaccagaag 39693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 17636 - 17865
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||  |  ||||||| |||| |||| ||||||||||||||||||||||||||||||      
T  17636 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagcttcaattcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaa 17734  T
Q  97 ctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    |||| |  || |||||||||||||   ||||| || ||||| ||||||||||| ||||||||||||||| | |||| ||||||||||||||| |||||||    
T  17735 ctcg-tctaagattgcagaagactacaaaagtatagcaacgtctattttgaaaggcattggatgcttatccttcaaagagcgttgacatagtacgtttgt 17833  T
Q  196 acgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||| |||||||||    
T  17834 atgaagtgtacaaccactatctccactactct 17865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25535 - 25765
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||| ||||||| |||| | || ||||||||||||| || ||||||| |||| |||| ||||| |||||||| |||||||||||||||  |    
T  25535 tcatcagaagcaacttcatcagaagctatgtatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaac 25634  T
Q  98 tcgc-tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    |||| |||||| ||||| |||||| | ||||| |  |||| | |||||||||| ||||||||||||||||| ||||  |||||||||||||| |||||||    
T  25635 tcgcctagaaa-ttgcaaaagactggaaaagtatggcaacagatattttgaaatgcattggatgcttattcttcaaaaagcgttgacatagtacgtttgt 25733  T
Q  196 acgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||| || |||||||||    
T  25734 acgaagtgtacaaccactacctccactactct 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34674 - 34904
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaa-gt-tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||   || |||| |||||||| || || |||| |||| |||| ||||| |||||||| |||||||||||||||  |    
T  34674 tcatcagaagcaagttcatcagaagctgtgtatcactagaagctgcagttcttcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaac 34773  T
Q  98 tcgc-tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgt 195  Q
    |||| |||||| |||||||||||| | ||||| |  |||||  |||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  34774 tcgcctagaaa-ttgcagaagactggaaaagtatggcaacgaatattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 34872  T
Q  196 acgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||||||||||| || |||||||||    
T  34873 atgaagtgtacaaccactacctccactactct 34904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 36249 - 36281
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||||||||||||||||||| ||||||    
T  36249 ttgtacgaagtgtacaaccactatctccactac 36281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 87472 - 87700
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctc 99  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||| | ||||| ||||  ||| ||||| |||||||||||||||||||| ||   ||     
T  87472 tcatcataagcaagttcatcaaaagcaagttcatcagaaactgtagtttatcaggagattgaacttaaagtttcaaaagctgtttcaaggactctaactt 87571  T
Q  100 gc-tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtac 197  Q
    || |||||| ||||||||||||   ||||| |  ||||| ||||||||||| |||||||||||  |||| |||| ||||||||||||||| ||| |||||    
T  87572 gcctagaaa-ttgcagaagactgaaaaagtatggcaacgactattttgaaatgcattggatgcaaattcttcaaagagcgttgacatagtacgtctgtac 87670  T
Q  198 gaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||  | |||||||||    
T  87671 gaagtgtacaaccactacttccactactct 87700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 2573 - 2791
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagca--agttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    ||||||||||||||||||||| ||||   |  ||||||||| ||| || ||||||| | || |||||||||| ||||||||||||||||||||||||  |    
T  2573 tcatcagaagcaagttcatcagaagctgtaaatcaccagaaactgcagttcatcaggaaatgcaacctaaagtttcaaaagctgtttcaaggattcaaac 2672  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta 196  Q
    ||||   |||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||           |||||||||||||| ||||||||    
T  2673 tcgcct-aaaattgcagaagactggaaaagtatagcaacggctattttgaaaagcattggatgctt-----------agcgttgacatagtacgtttgta 2760  T
Q  197 cgaagtgtacaaccactatctgcactactct 227  Q
     ||||||||||||||||| || |||||||||    
T  2761 tgaagtgtacaaccactaactccactactct 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 7019 - 7256
Alignment:
Q  3 atcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgct 98  Q
    ||||||||||||||||||| ||||  ||   |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||| |||||||||  |     
T  7019 atcagaagcaagttcatcagaagct-gtgaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttgaaggattcaaacc 7117  T
Q  99 cgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacatagtg 188  Q
    ||   ||| ||||||||||||| | ||||| || ||||| |||||||| ||         |||||||||||||||||| ||||  | ||||||||| ||     
T  7118 cgtctgaagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcattggatgcttattcttcaaacaacgttgacatggta 7217  T
Q  189 cgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  7218 cgtttgtacgaagtgtacaaccactatctccactactct 7256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 227
Target Start/End: Original strand, 722 - 921
Alignment:
Q  30 ttcaccagaagctgtagatcatcagaagatcaacct-aaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaag 127  Q
    |||||||||| ||| || ||||||| |||| || || |||| |||||||||||||||||||| ||   |||| ||| ||| |||||||||||| | ||||    
T  722 ttcaccagaaactgcagttcatcaggagatgaaacttaaagtttcaaaagctgtttcaaggactctaactcgtctataaa-ttgcagaagactagaaaag 820  T
Q  128 t-taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    | |  |||| |||||||||||| | ||||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||  | ||||||||    
T  821 tatggcaacagctattttgaaatgtattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactacttccactactc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9809 - 9571
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatg 96  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||| || ||||||| |||| |||| |||||||||||||| |||||||||||||||      
T  9809 tcatcagaagcaagttcatcataagct-gtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaa 9711  T
Q  97 ctcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    || | |  || ||||||||||||| ||||||| || ||||| ||||||||||| |         ||||||||||||||||  |||  |||||||||||||    
T  9710 cttg-tctaagattgcagaagactgggaaagtatagcaacgactattttgaaaggattgaagggcattggatgcttattctacaaacagcgttgacatag 9612  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | ||  ||||||||||||||||||||||||| |||||||||    
T  9611 tacgactgtacgaagtgtacaaccactatctccactactct 9571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 22154 - 22231
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||| || ||||||    
T  22154 gcattggatgcttattcttcaatgagcgttgacataatacgtttgtacgaagtgtacaaccactatctccagtactct 22231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21977 - 22033
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaag 57  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||  |||| ||||||    
T  21977 tcatcagaagcaagttcatcagaagcaagtttatcagaagctgtgaatcaccagaag 22033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21962 - 22002
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||| ||||||||||| |||||||    
T  21962 tcatcagaagcaaggtcatcagaagcaagttcatcagaagc 22002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 215358 - 215597
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  ||  ||||||||||||| || | ||||| |||| |||| |||| ||||||||||||||| | |||||||  |    
T  215358 tcatcagaagcaagtttatcagaagccgaaaatcaccagaagctgcagtttatcaggagatgcaacttaaaacttcaaaagctgtttaatggattcaaac 215457  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||||| | ||||| || ||||||||||||||||| |         |||||||||||| ||| |||| ||||||||||| ||    
T  215458 tcgtcta-aagattgcagaagactagaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaag 215556  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | |||||||||||||||||||||||||| || |||||||||    
T  215557 tacgtttgtacgaagtgtacaaccactacctccactactct 215597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 61021 - 60814
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-ctagaaaattgcagaagacttggaaagt 128  Q
    |||||||||| ||||| ||||||| |||| |||| |||| ||||||||| ||||| ||||||| |  |||| ||| |||||||||||||||| | |||||    
T  61021 tcaccagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagttgtttaaaggatttaaactcgtcta-aaaattgcagaagactggaaaagt 60923  T
Q  129 -taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctg 218  Q
     || |||||||||||||| || |         ||||| |||||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||||||     
T  60922 atagcaacggctattttggaaggattggaaggcattgaatgcttgttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 60823  T
Q  219 cactactct 227  Q
    |||||||||    
T  60822 cactactct 60814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 8149 - 7963
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||||||||  |||| |  || ||||||||||||| | |||||     
T  8149 tcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattcaaactcg-tctaagattgcagaagactggaaaagta 8051  T
Q  129 taacaacggctattttgaaa---------agcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtaca 207  Q
    || ||||| |||||||||||          ||||| ||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  8050 tagcaacgactattttgaaaggattgaattgcattcgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 86 - 22
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  86 tcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattca 22  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 9243 - 9168
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  9243 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 9168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 9372 - 9308
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    |||||||||| ||||| ||||||| |||| |||| |||||||||||||||||||| | |||||||    
T  9372 tcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 211643 - 211409
Alignment:
Q  4 tcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcg-c 101  Q
    ||||| |||||||||||| ||||||||| | |||||||||||| ||||||| |||| || | |||||||||||||| ||||| | |||||||  |||| |    
T  211643 tcagacgcaagttcatcagaagcaagtttatcagaagctgtagctcatcaggagatgcagcttaaagcttcaaaagttgtttaacggattcaaactcgtc 211544  T
Q  102 tagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagtgcgt 191  Q
    || || ||||||||||||| | ||||| || ||||| |||||||| || |         |||| ||||||||||| |||| ||||||||||||||| |||    
T  211543 ta-aagattgcagaagactggaaaagtatagcaacgactattttgtaaggattttaatgcatttgatgcttattcttcaaagagcgttgacatagtacgt 211445  T
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| |||||| |||| || |||||||||    
T  211444 ttgtacgaagtatacaactactacctccactactct 211409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 377582 - 377658
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | |||| |||||| ||| |  |||||| ||||||||||||||||||| ||||||||    
T  377582 gcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagtgtacaaccactatctccactactc 377658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3554 - 3315
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  ||  |||||||||||| ||| ||||||| |||| |||| |||||||||||||||||||| | |||||||  |    
T  3554 tcatcagaagcaagtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaac 3455  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagt-taacaacggctattttg---------aaaagcattggatgcttattcctcaaggagcgttgacatag 186  Q
    ||| ||| || ||||||||||| | | ||||| |||||||||||||||||          || |||||||||| |||||| |||| ||||||||| ||||    
T  3454 tcgtcta-aagattgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatag 3356  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    | ||||||||| |||||||||||||||| || |||| ||||    
T  3355 tacgtttgtacaaagtgtacaaccactacctccactgctct 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3584 - 3544
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||| ||||||||||| |||||||    
T  3584 tcatcagaagcaaggtcatcagaagcaagttcatcagaagc 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 2750 - 2830
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||| ||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  2750 aaagcattggatgcgtattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 2830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 7487 - 7392
Alignment:
Q  132 caacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||| ||||||| |||||||||||| |||| |||| ||||||||||||||| | ||||||||||||||||||||||||  | |||||||||    
T  7487 caacggctagtttgaaatgcattggatgctaattcatcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactacttccactactct 7392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 99069 - 99305
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcag-aagatcaacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  ||| |||||||||| ||||| ||||||| |||  |||| |||||||||||||||||||| | |||||||  |    
T  99069 tcatcagaagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaac 99168  T
Q  98 tcgctagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatagt 187  Q
    ||| |  ||| ||||||| |||  | ||||| || ||||| |||||||| || |         |||||||||||||||| ||||  |||| |||||||||    
T  99169 tcg-tctaaagttgcagatgaccggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaa--agcgctgacatagt 99265  T
Q  188 gcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
     ||||||||||||||||||||||||||||| |||||||||    
T  99266 acgtttgtacgaagtgtacaaccactatctccactactct 99305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 19491 - 19571
Alignment:
Q  146 aaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||||| ||| |  | ||||||||||||| | |  |||||||||||||||||||||||| | ||||||||    
T  19491 aaaagcattggatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactatattcactactc 19571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 99039 - 99079
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    |||||||||||||| |||||||||| ||||||| |||||||    
T  99039 tcatcagaagcaaggtcatcaaaagtaagttcatcagaagc 99079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 6601 - 6841
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgc 97  Q
    |||||||||||||||| |||| ||||  |   |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||| | |||||||  |    
T  6601 tcatcagaagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaac 6700  T
Q  98 tcg-ctagaaaattgcagaagacttggaaagttaa-caacggctattttgaaaag---------cattggatgcttattcctcaaggagcgttgacatag 186  Q
    | | ||| |  ||||||||||||| | ||||| || || || |||||||||||||         |||||||||||| ||| |||| |||| |||||| ||    
T  6701 ttgtcta-aggattgcagaagactggaaaagtgaagcaccgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcattgacaaag 6799  T
Q  187 tgcgtttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    | |||||||||||||||||||||||||| || || |||||||    
T  6800 tacgtttgtacgaagtgtacaaccactacctccagtactcta 6841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6571 - 6611
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagc 41  Q
    ||||||| |||||||||||||||||| |||||| |||||||    
T  6571 tcatcaggagcaagttcatcaaaagctagttcatcagaagc 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 25422 - 25499
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||  |||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  25422 gcattggatagttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 25499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 23456 - 23520
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||| || ||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  23456 tcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattca 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 78389 - 78464
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||||||| | || ||||||||||| ||| |||||||||||||||||||||||||| || |||||||    
T  78389 gcattggatgcttattctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctacactact 78464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 12300 - 12221
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||||||||||||||||| |  | ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  12300 aaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 5226 - 5425
Alignment:
Q  31 tcaccagaagctgtagatcatcagaagatc-aacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagt- 128  Q
    ||||||||||||| || ||||||| ||||  ||| || || |||||||||||||| ||||| ||   |||||   || ||||||||||||| | || ||     
T  5226 tcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagctgttttaaggactctaactcgcctaaagattgcagaagactggaaatgtg 5325  T
Q  129 taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgta-cgaagtgtacaaccactatctgcactactct 227  Q
    |  |||| |||||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||| ||||   ||||||||||||||||  | |||||||||    
T  5326 tggcaacagctattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtatgtagaaaagtgtacaaccactacttccactactct 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 1598 - 1799
Alignment:
Q  37 gaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattcatgctcgctagaaaattgcagaagacttggaaagttaa-caa 134  Q
    ||||||| || ||||||| |||| ||||  ||||||||||||||||||| | |||||||  |||| |  || ||||||||||||||| ||||| || |||    
T  1598 gaagctgcagttcatcaggagatgcaactcaaagcttcaaaagctgtttaatggattcaaactcgtttaaatattgcagaagacttgaaaagtgaagcaa 1697  T
Q  135 cggctattttga---------aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    || |||||||||         || ||| |||||| || ||| |||| ||||||||||| ||| ||||| |||||||||||||||||||| || |||| ||    
T  1698 cgactattttgaaaggatttgaaggcactggatgattgttcttcaaagagcgttgacaaagtacgtttttacgaagtgtacaaccactaccttcactgct 1797  T
Q  226 ct 227  Q
    ||    
T  1798 ct 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 20994 - 21071
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| |||||| |||  ||| |  |||||||||||||||||||||||||| |||||||||    
T  20994 gcattggatgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctccactactct 21071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 368 - 445
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| | |||| ||||||||||| ||| ||| |||||||||||||| ||||||| || |||||||||    
T  368 gcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactct 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 32550 - 32497
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||||||    
T  32550 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 32497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 49420 - 49344
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||| ||||||| ||||||||    
T  49420 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactc 49344  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 164969 - 165046
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| | |||| ||||||||||| ||| ||| |||||||||||||| ||||||| || |||||||||    
T  164969 gcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactct 165046  T

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Target: scaffold0011; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 65290 - 65386
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||| || ||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  65290 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattca 65386  T

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Target: scaffold0011; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 144335 - 144431
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||||||||||| ||||  ||   ||||||||||||| || ||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  144335 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattca 144431  T

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Target: scaffold0211 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 15645 - 15722
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||   |||| |||| |||||| ||| ||| |||||||||||||| |||||||||| |||||||||    
T  15645 gcattggatgcttatctttcaaagagcattgacaaagtacgtctgtacgaagtgtacgaccactatctccactactct 15722  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 27452 - 27529
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||  || |||| ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  27452 gcattggatgcttgctcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccactacctccactactct 27529  T

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Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27290 - 27348
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| |||||||| |||| || ||||||| ||||    
T  27290 tcatcagaagcaagttcatcagaagcaagatcaccagatgctgaagttcatcaggagat 27348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 38108 - 38185
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||| | |||| ||||||||||| ||| |||  ||||||||||||| ||||||| || |||||||||    
T  38108 gcattggatgcttatccttcaaagagcgttgacaaagtacgtccgtacgaagtgtacgaccactacctccactactct 38185  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 8013 - 7940
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactac 224  Q
    |||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||||||||| ||||||    
T  8013 cattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactac 7940  T

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Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 60103 - 60037
Alignment:
Q  151 cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatct 217  Q
    |||||||||||| ||| |  | ||||||||||||||| |  ||||||||||||||||||||||||||    
T  60103 cattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 60037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 7791 - 7715
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    |||||| ||| |||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||| || ||||||||    
T  7791 gcattgtatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 7715  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 212445 - 212365
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||| ||| |  | ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||    
T  212445 aaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 212365  T

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Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 246108 - 246204
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagt---tcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaaagctgtttcaaggattca 94  Q
    ||||||||||||||||||||| ||||  ||   |||||||||| || || ||||||| |||| |||| |||||||||||||| |||||||||||||||    
T  246108 tcatcagaagcaagttcatcagaagct-gtgaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattca 246204  T

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Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 1820 - 1895
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||||| | |||| ||||||||||| ||| ||| | |||||||||||| ||||||| || |||||||    
T  1820 gcattggatgcttatccttcaaagagcgttgacaaagtacgtctatacgaagtgtacgaccactacctccactact 1895  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 5625 - 5700
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||| ||||||||||| |||| ||||||||||| ||| | ||| || ||||||||||||||||| || |||||||    
T  5625 gcatttgatgcttattcttcaaagagcgttgacaaagtacatttatatgaagtgtacaaccactacctccactact 5700  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 103660 - 103585
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||| ||| |||| ||||||||||| ||| |  ||||||||||||| ||||||||| || |||||||    
T  103660 gcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtgcaaccactacctccactact 103585  T

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Target: scaffold0426 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13876 - 13818
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| ||||||||||||  || ||||||| ||||    
T  13876 tcatcagaagcaagttcatcagaagcaagatcaccagaagctaaagctcatcaggagat 13818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 13636 - 13583
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||||| |  |||||| ||||||||||||||||||| ||||||||    
T  13636 gagcgttgacatagtacaattgtacaaagtgtacaaccactatctccactactc 13583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 22764 - 22687
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| |||| ||| ||||||| ||| |  ||||| |||| |||||||||||| || |||||||||    
T  22764 gcattggatgcttattcttcaaagagtgttgacaaagtacaattgtatgaagcgtacaaccactacctccactactct 22687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11626 - 11585
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagct 42  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  11626 tcatcagaagcaagttcatcaaaagcaagttcatcataagct 11585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 563 - 487
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||||||| |  |||||||||||||||||||| ||||| || |||||    
T  563 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccattatctccattactc 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 5713 - 5789
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||||||||||| ||| |  |||||||||||||||||| ||||||| ||||||||    
T  5713 gcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatctccactactc 5789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 1363 - 1328
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  1363 ttgtacgaagtgtacaaccactatctccactactct 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 48 - 83
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactct 227  Q
    |||||||||||||||||||||||||| |||||||||    
T  48 ttgtacgaagtgtacaaccactatctccactactct 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 15181 - 15130
Alignment:
Q  174 agcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  15181 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 15130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 89916 - 89994
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat-caacctaaagcttcaaa 76  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| || ||||||| |||| |||| ||||||||||||    
T  89916 tcatcagaagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaa 89994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 90078 - 90155
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||| |||| ||||||||||| | | |   |||||||||||||||||| ||| || |||||||||    
T  90078 gcattggatgcttgttcttcaaagagcgttgacaaaatacaagtgtacgaagtgtacaacccctacctccactactct 90155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10219 - 10161
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||| |||| ||||| || || ||||||| ||||    
T  10219 tcatcagaagcaagttcatcagaagcaagatcacaagaagttgaagttcatcaggagat 10161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 10060 - 9980
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||||||| || |  | ||||||| ||| ||| |  |||||| |||||||||||||||| || |||||||||    
T  10060 aaagcattggatgcttactctttgaagagcgttcacaaagtacaattgtacaaagtgtacaaccactacctccactactct 9980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6256 - 6198
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttcaccagaagctgtagatcatcagaagat 59  Q
    ||||||||||||||||||||| ||||||  |||| ||||| || || ||||||||||||    
T  6256 tcatcagaagcaagttcatcagaagcaatatcactagaagttgaagttcatcagaagat 6198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 1751 - 1673
Alignment:
Q  147 aaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||||||||| || |  | ||||||||||| ||| |  ||||| ||||||||||||||||| || |||||||    
T  1751 aaagcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccactacctccactact 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 2041 - 2090
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcact 222  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||| ||||    
T  2041 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccact 2090  T

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Target: scaffold0290 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 18667 - 18720
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||| ||| |  || ||||||||||||||||||||||| ||||||||    
T  18667 gagcgttgacaaagtacaattttacgaagtgtacaaccactatctccactactc 18720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 10131 - 10208
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||||| ||  | || ||||||||||| ||| |  ||||||||||||||| ||||||| || |||||||||    
T  10131 gcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactct 10208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 43942 - 44019
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 227  Q
    ||||||||||| | |||||  | ||||||||| | ||  | |||||||||| |||||||||||||||| |||||||||    
T  43942 gcattggatgcctgttccttgaagagcgttgaaaaaggacatttgtacgaattgtacaaccactatctccactactct 44019  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 1586 - 1619
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactact 225  Q
    |||||||||||||||||||||||||| |||||||    
T  1586 ttgtacgaagtgtacaaccactatctccactact 1619  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 25998 - 26074
Alignment:
Q  150 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 226  Q
    ||||||||||||| ||| |  | ||| ||||||||||| |  ||||| ||||||||||||||||||||  |||||||    
T  25998 gcattggatgcttgttctttgaagagggttgacatagtacaattgtatgaagtgtacaaccactatctcgactactc 26074  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 1755 - 1703
Alignment:
Q  173 gagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactact 225  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| || |||||||    
T  1755 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 1703  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 74846 - 74814
Alignment:
Q  1 tcatcagaagcaagttcatcaaaagcaagttca 33  Q
    ||||||||||||||||||||| |||||||||||    
T  74846 tcatcagaagcaagttcatcataagcaagttca 74814  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 37448 - 37412
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||||||||||||| || ||||||||||    
T  37448 ttgtacgaagtgtacaaccactacctccactactcta 37412  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 39676 - 39617
Alignment:
Q  2 catcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat 59  Q
    |||||||||||||||||||| ||||  ||| |||||||||||| ||| ||||||| ||||    
T  39676 catcagaagcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagat 39617  T

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Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 135508 - 135472
Alignment:
Q  192 ttgtacgaagtgtacaaccactatctgcactactcta 228  Q
    ||||||||||||||||||||||| || ||||||||||    
T  135508 ttgtacgaagtgtacaaccactacctccactactcta 135472  T

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Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 137736 - 137677
Alignment:
Q  2 catcagaagcaagttcatcaaaagc--aagttcaccagaagctgtagatcatcagaagat 59  Q
    |||||||||||||||||||| ||||  ||| |||||||||||| ||| ||||||| ||||    
T  137736 catcagaagcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagat 137677  T

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