View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5074-Insertion-1 (Length: 1118)

Name: NF5074-Insertion-1
Description: NF5074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5074-Insertion-1
NF5074-Insertion-1
[»] chr5 (19 HSPs)
chr5 (440-983)||(26341487-26342028)
chr5 (8-442)||(26340984-26341418)
chr5 (191-300)||(20039367-20039476)
chr5 (189-301)||(1822050-1822162)
chr5 (150-300)||(34371757-34371907)
chr5 (150-300)||(3886908-3887058)
chr5 (189-294)||(10927293-10927398)
chr5 (167-300)||(29679975-29680108)
chr5 (858-930)||(26348539-26348611)
chr5 (191-300)||(17445347-17445456)
chr5 (1012-1093)||(26342040-26342124)
chr5 (223-294)||(10926870-10926941)
chr5 (190-300)||(27646726-27646836)
chr5 (150-255)||(8641886-8641991)
chr5 (150-255)||(15512863-15512968)
chr5 (53-114)||(26311641-26311702)
chr5 (150-274)||(3886452-3886576)
chr5 (220-300)||(21886067-21886147)
chr5 (150-252)||(2474598-2474700)
[»] chr8 (22 HSPs)
chr8 (150-295)||(32292091-32292236)
chr8 (149-300)||(2044203-2044354)
chr8 (190-300)||(32292542-32292652)
chr8 (189-300)||(8080232-8080343)
chr8 (191-293)||(15818908-15819010)
chr8 (150-255)||(34308786-34308891)
chr8 (150-255)||(34308330-34308435)
chr8 (150-300)||(22548400-22548550)
chr8 (191-300)||(31283544-31283652)
chr8 (191-300)||(33852150-33852259)
chr8 (204-288)||(10729780-10729864)
chr8 (191-255)||(17103272-17103336)
chr8 (150-300)||(22026524-22026675)
chr8 (221-300)||(27819168-27819247)
chr8 (189-228)||(34688053-34688092)
chr8 (262-300)||(6464873-6464911)
chr8 (150-300)||(22548846-22548996)
chr8 (234-300)||(44042025-44042091)
chr8 (191-260)||(6466441-6466510)
chr8 (191-271)||(9251058-9251139)
chr8 (191-300)||(12100836-12100944)
chr8 (150-255)||(27926088-27926193)
[»] chr2 (15 HSPs)
chr2 (150-300)||(16379082-16379232)
chr2 (150-300)||(1912669-1912819)
chr2 (150-300)||(15639879-15640029)
chr2 (152-300)||(30966379-30966527)
chr2 (194-300)||(15620043-15620149)
chr2 (150-300)||(32377758-32377908)
chr2 (167-300)||(16379538-16379671)
chr2 (191-300)||(29259512-29259621)
chr2 (149-300)||(25433906-25434057)
chr2 (150-300)||(30966835-30966985)
chr2 (150-300)||(25337848-25337998)
chr2 (191-293)||(33771153-33771255)
chr2 (191-300)||(24818471-24818579)
chr2 (191-300)||(30963155-30963264)
chr2 (195-300)||(8256671-8256776)
[»] chr7 (20 HSPs)
chr7 (150-301)||(29038871-29039022)
chr7 (189-300)||(22529125-22529236)
chr7 (150-300)||(679961-680111)
chr7 (150-300)||(28495999-28496149)
chr7 (193-300)||(9623352-9623459)
chr7 (150-228)||(6747457-6747535)
chr7 (191-275)||(26419127-26419211)
chr7 (150-300)||(2193401-2193551)
chr7 (150-300)||(7646329-7646479)
chr7 (150-300)||(36422397-36422546)
chr7 (150-300)||(42515237-42515387)
chr7 (191-300)||(2941649-2941758)
chr7 (219-300)||(26421680-26421761)
chr7 (184-300)||(35474006-35474122)
chr7 (189-300)||(3305238-3305349)
chr7 (205-300)||(34405497-34405592)
chr7 (246-300)||(25182506-25182560)
chr7 (150-228)||(31743740-31743818)
chr7 (191-300)||(2189289-2189398)
chr7 (189-290)||(29357346-29357447)
[»] chr4 (26 HSPs)
chr4 (150-300)||(23943087-23943237)
chr4 (191-270)||(14571574-14571653)
chr4 (150-300)||(1645594-1645744)
chr4 (191-268)||(8467699-8467776)
chr4 (190-300)||(9423743-9423853)
chr4 (192-270)||(14572041-14572119)
chr4 (150-271)||(4127263-4127384)
chr4 (149-300)||(7678466-7678617)
chr4 (193-300)||(13613786-13613893)
chr4 (189-300)||(27578170-27578281)
chr4 (148-300)||(21067876-21068028)
chr4 (191-279)||(31817024-31817112)
chr4 (189-300)||(3169351-3169462)
chr4 (150-300)||(13266231-13266381)
chr4 (191-300)||(35871772-35871881)
chr4 (150-253)||(7381459-7381562)
chr4 (189-300)||(23942673-23942784)
chr4 (189-300)||(44470759-44470870)
chr4 (150-300)||(21067427-21067577)
chr4 (189-271)||(27578793-27578875)
chr4 (150-300)||(49998781-49998931)
chr4 (150-300)||(50398383-50398533)
chr4 (150-228)||(50398839-50398917)
chr4 (191-252)||(4127775-4127836)
chr4 (215-300)||(12691909-12691994)
chr4 (189-230)||(53996014-53996055)
[»] scaffold0005 (2 HSPs)
scaffold0005 (191-270)||(245723-245802)
scaffold0005 (192-270)||(245257-245335)
[»] chr3 (25 HSPs)
chr3 (150-300)||(20884968-20885118)
chr3 (150-300)||(30529832-30529981)
chr3 (195-293)||(7477343-7477441)
chr3 (150-300)||(14820299-14820449)
chr3 (190-300)||(25238575-25238685)
chr3 (149-300)||(37045180-37045328)
chr3 (150-300)||(39653309-39653459)
chr3 (150-294)||(25230099-25230243)
chr3 (150-294)||(25237686-25237830)
chr3 (195-293)||(7494033-7494131)
chr3 (150-300)||(25230556-25230706)
chr3 (150-300)||(25238143-25238293)
chr3 (152-300)||(11179887-11180035)
chr3 (149-300)||(8067425-8067576)
chr3 (150-300)||(16811526-16811674)
chr3 (149-300)||(32227645-32227796)
chr3 (150-300)||(13150405-13150555)
chr3 (150-300)||(32227072-32227222)
chr3 (167-300)||(4067228-4067361)
chr3 (150-255)||(28561935-28562040)
chr3 (150-250)||(14814144-14814244)
chr3 (205-300)||(25802910-25803005)
chr3 (208-294)||(25248262-25248348)
chr3 (150-300)||(25802399-25802549)
chr3 (150-300)||(50347891-50348041)
[»] chr6 (16 HSPs)
chr6 (149-300)||(23986167-23986318)
chr6 (150-300)||(17027382-17027532)
chr6 (204-300)||(2720468-2720564)
chr6 (189-293)||(3652675-3652779)
chr6 (168-299)||(3653048-3653175)
chr6 (150-300)||(20850466-20850616)
chr6 (208-300)||(11062430-11062522)
chr6 (150-294)||(21312122-21312266)
chr6 (189-300)||(2890729-2890840)
chr6 (189-300)||(14771609-14771720)
chr6 (206-300)||(17851519-17851613)
chr6 (167-300)||(2891162-2891294)
chr6 (153-294)||(7912461-7912602)
chr6 (191-290)||(1991708-1991807)
chr6 (150-293)||(7912030-7912173)
chr6 (189-300)||(17851063-17851174)
[»] scaffold1519 (1 HSPs)
scaffold1519 (150-300)||(1552-1702)
[»] scaffold0322 (1 HSPs)
scaffold0322 (150-300)||(19111-19261)
[»] chr1 (19 HSPs)
chr1 (190-300)||(43057414-43057524)
chr1 (150-300)||(50002926-50003076)
chr1 (189-300)||(43056955-43057066)
chr1 (150-300)||(20054387-20054537)
chr1 (150-300)||(20054843-20054993)
chr1 (150-300)||(20055299-20055449)
chr1 (150-300)||(20055755-20055905)
chr1 (150-300)||(20056211-20056361)
chr1 (150-300)||(20057114-20057264)
chr1 (150-300)||(20057570-20057720)
chr1 (149-300)||(38341051-38341202)
chr1 (150-300)||(20056667-20056817)
chr1 (191-300)||(20845553-20845662)
chr1 (190-294)||(2634617-2634721)
chr1 (149-300)||(20060190-20060341)
chr1 (150-255)||(52250396-52250501)
chr1 (262-300)||(35009959-35009997)
chr1 (150-300)||(52250688-52250838)
chr1 (150-300)||(52251025-52251175)
[»] scaffold0243 (1 HSPs)
scaffold0243 (150-300)||(1365-1515)
[»] scaffold0022 (3 HSPs)
scaffold0022 (150-292)||(69666-69808)
scaffold0022 (191-300)||(163026-163135)
scaffold0022 (189-300)||(163216-163327)
[»] scaffold0047 (2 HSPs)
scaffold0047 (189-300)||(18025-18136)
scaffold0047 (194-300)||(17493-17599)
[»] scaffold0217 (1 HSPs)
scaffold0217 (191-300)||(455-564)
[»] scaffold0499 (1 HSPs)
scaffold0499 (191-300)||(1943-2052)
[»] scaffold0040 (1 HSPs)
scaffold0040 (191-300)||(2102-2211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (191-300)||(10445-10553)
[»] scaffold0333 (1 HSPs)
scaffold0333 (189-300)||(4706-4816)
[»] scaffold0277 (1 HSPs)
scaffold0277 (150-300)||(14553-14703)
[»] scaffold0168 (1 HSPs)
scaffold0168 (150-300)||(2887-3037)
[»] scaffold0020 (1 HSPs)
scaffold0020 (150-300)||(107314-107464)
[»] scaffold0137 (1 HSPs)
scaffold0137 (220-269)||(7118-7167)


Alignment Details
Target: chr5 (Bit Score: 451; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 440 - 983
Target Start/End: Original strand, 26341487 - 26342028
Alignment:
Q  440 ttcctccatgtgtttcctcgaggacattgttacctccttcctttatcaagcatttaaacaatgttttggatcgtcctctttggtacagttgtcccttaat 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26341487 ttcctccatgtgtttcctcgaggacattgttacctccttcctttatcaagcatttaaacaatgttttggagcgtcctctttggtacagttgtcccttaat 26341586  T
Q  540 aacaaagaaagaacatgattggcatttgatgcaggaagccacgttataccatgggggtcctctttgcagacctctgctatgaaaccatccaagataggat 639  Q
    || |||   |||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  26341587 aaaaaa---agaacatgattgtcatttgatgcaggcagccacattataccatggtggtcctctttgcagacctctgctatgaaaccatctaggataggat 26341683  T
Q  640 tcgacaaagtctcatgtataactatcttgttttcacttttccttttagaacttgctatcttagagagtctgtcagccttcaggttattctctcgtggaat 739  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  26341684 tcgacaaagtctcatgtataactatcttgttttcacttttccttttagaacttgctatcttagagaatttgtcagcctttaggttattctctcgtggaat 26341783  T
Q  740 gtgtctgagccttaccaacttgaatcttcagatggtttatttaacgaggcacaaatatctttgcatcttttgacccatagccttgtattccctatttatt 839  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26341784 gtgtctgagccttaccaacttgaatcttcagatgatttatttaacgaggcacaaatatctttgcatcttttgacccatagccttgtattccctatttatt 26341883  T
Q  840 tgagaaatcactacttttaagtccgacctgagcagtatttcttgagtccctatttctgctacgtgttggagtctggctaggcatgctttgtatttagact 939  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  26341884 tgagaaatcactacttttaagtccgacttgagcagtatttcttgagtccctatttctgctacgtgttggagtctggctaggcatgttttgtattcagact 26341983  T
Q  940 ggttatttgtattctc-aaattgaagcagatggagacttcgattt 983  Q
    |||||||||||||| | |||||||||| ||||||||||| |||||    
T  26341984 ggttatttgtattcacaaaattgaagcggatggagacttggattt 26342028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 8 - 442
Target Start/End: Original strand, 26340984 - 26341418
Alignment:
Q  8 attcggatatttattttgcaagtgtttcgcaagtgatgtttgttctttactttatcgtatcttaatgcgagctagtctacttgtggcaatcggttcatag 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26340984 attcggatatttattttgcaagtgtttcgcaagtgatgtttgttctttactttatcgtatcttaatgcaagctagtctacttgtggcaatcggttcatag 26341083  T
Q  108 ccaaaggtcgacttccctcgaccctactatggaggcattacctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  |||||||| || ||||||||| |||||    
T  26341084 ccaaaggtcgacttccctcgaccctactatggaggcattacctgtaatattccagactgctttaagcattatcgaataacgttataaaccaacaccagtc 26341183  T
Q  208 ttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaaaggtatg 307  Q
    ||||  ||||| ||||||||| |||||||| |||| |||||| ||  |||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  26341184 ttttagacgtgttttgtcctcactcacatgttttctgggaaatttttcaaaaggtcacccatccaaagactactccaaatcaagcacacttaaaggtatg 26341283  T
Q  308 aggatgttcatcccccaacatgagaatggccatggagatgacactatgttcagttcaatcggggatgctacatgcatatctccatgtttttggcatttgt 407  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26341284 aggatgttcatcccccaatatgagaatggtcatggagataacactatgttcagttcaatcgggggtgctacatgcatatctccatgtttttggcatttgt 26341383  T
Q  408 cacatgtcttagcatattctttagaattcgtgttc 442  Q
    |||||||||||||||||||||||||||| ||||||    
T  26341384 cacatgtcttagcatattctttagaatttgtgttc 26341418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 20039367 - 20039476
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||| |||||||||| |||| ||||||||| ||| || |||| |||||||||||||||| || ||||| |||||||||||| || |||||||    
T  20039367 acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcaccaatccaaagactactctaagtcaa 20039466  T
Q  291 gcacacttaa 300  Q
    ||||||||||    
T  20039467 gcacacttaa 20039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 1822162 - 1822050
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| |||| |||||||||  ||||| |||| ||||||||||||||   || |||||||||||||||||| ||||||||    
T  1822162 ctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaaacttcccggtaggtcacccatccaaagactactccaagtc 1822063  T
Q  289 aagcacacttaaa 301  Q
    |||||| ||||||    
T  1822062 aagcacgcttaaa 1822050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 34371907 - 34371757
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  ||||||||||||||| ||||||||| ||| || |||| ||||||||    
T  34371907 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaaa 34371808  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  || |||||||||| || | |  |||||||||||||| |||||    
T  34371807 cttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 34371757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 3886908 - 3887058
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||| ||| |||| ||||||||| ||| || |||| | ||||||    
T  3886908 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaaa 3887007  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  || ||||||||||||| | |  |||||||||||||| |||||    
T  3887008 cttcccagtaggtcacccatccaaaaattgctccaagtcaagcacgcttaa 3887058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 10927293 - 10927398
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| |||| |||||||||  ||||| |||| |||  |||||||||    | |||||||||||||||||| ||||||||    
T  10927293 ctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgaaaaacttcccggtcggtcacccatccaaagactactccaagtc 10927392  T
Q  289 aagcac 294  Q
    ||||||    
T  10927393 aagcac 10927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 300
Target Start/End: Original strand, 29679975 - 29680108
Alignment:
Q  167 ctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacc 266  Q
    ||||||||||| | || | || |||||||||||||  |||||||||| |||| |||||||||  |  || ||||  ||||||||||| |  ||| |||||    
T  29679975 ctttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaacttctcggaaggtcacc 29680074  T
Q  267 catccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||||||| |||||||||| ||| |||||    
T  29680075 catccaaagactactccaagtcaaacacgcttaa 29680108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 858 - 930
Target Start/End: Original strand, 26348539 - 26348611
Alignment:
Q  858 aagtccgacctgagcagtatttcttgagtccctatttctgctacgtgttggagtctggctaggcatgctttgt 930  Q
    |||||| |||| ||| |||||| |||||||||||||| |||||||||||||||||  | ||||||||||||||    
T  26348539 aagtcctacctaagcggtatttattgagtccctatttatgctacgtgttggagtcaagataggcatgctttgt 26348611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 17445347 - 17445456
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||||||||   || |||||||||| || | |  ||||||||||    
T  17445347 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 17445446  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  17445447 gcacgcttaa 17445456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1012 - 1093
Target Start/End: Original strand, 26342040 - 26342124
Alignment:
Q  1012 gccctacaccccttgacttgatgtacacaatc-atcgatgg-atgattatgg-ttttcggattccatcattgtcacgatgtctgc 1093  Q
    |||| ||||||||||||| ||||||||||||| |||||||| |||||||||| ||||| |||  |||| ||||||||||||||||    
T  26342040 gccccacaccccttgactcgatgtacacaatctatcgatggaatgattatggtttttcagatgtcatcgttgtcacgatgtctgc 26342124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 10926870 - 10926941
Alignment:
Q  223 gtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    |||||| |||||| |||| || |||||||||||   || |||||||||||||||||| ||||||||||||||    
T  10926870 gtcctcactcacacgcttaccaggaaacttcccggtaggtcacccatccaaagactactccaagtcaagcac 10926941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 27646726 - 27646836
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    ||||||||||||| |||||||||| | || ||||||||| ||| || | ||   ||||||||||||   || |||||||| ||||||||| |||||| ||    
T  27646726 tacaaaccaacatgagtcttttcagcatgttttgtcctcactcgcacgtttattgggaaacttcccggtaggtcacccatgcaaagactactccaagaca 27646825  T
Q  290 agcacacttaa 300  Q
    ||||| |||||    
T  27646826 agcacgcttaa 27646836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 8641886 - 8641991
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||| ||||    
T  8641886 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaa 8641985  T
Q  250 cttccc 255  Q
    ||||||    
T  8641986 cttccc 8641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 15512863 - 15512968
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||| |||||| |||||||| || ||| | || | || | |||||||||||  ||||||||||||||  ||||||||| ||| || |||| ||||||||    
T  15512863 tgtaatatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaaa 15512962  T
Q  250 cttccc 255  Q
    ||||||    
T  15512963 cttccc 15512968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 26311641 - 26311702
Alignment:
Q  53 tttactttatcgtatcttaatgcgagctagtctacttgtggcaatcggttcatagccaaagg 114  Q
    |||| ||| |||||||||||||||| |||||| ||||||||||| | |||| ||||||||||    
T  26311641 tttaatttgtcgtatcttaatgcgacctagtcaacttgtggcaaccagttcttagccaaagg 26311702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 274
Target Start/End: Original strand, 3886452 - 3886576
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| | |||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| | ||||||    
T  3886452 tgtaacatcccagaatgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaa 3886551  T
Q  250 cttcccaaaagatcacccatccaaa 274  Q
    ||||||   || |||||||||||||    
T  3886552 cttcccggtaggtcacccatccaaa 3886576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 21886067 - 21886147
Alignment:
Q  220 tttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||| ||| || |||| |||||||||||||||  || |||||||||| || | |  ||||||||||||||||||||    
T  21886067 tttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacacttaa 21886147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 2474700 - 2474598
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||| ||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||| ||||| ||| ||||||| ||||||||    
T  2474700 tgtaacgtcccagactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaaa 2474601  T
Q  250 ctt 252  Q
    |||    
T  2474600 ctt 2474598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 3e-26; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 150 - 295
Target Start/End: Complemental strand, 32292236 - 32292091
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  32292236 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 32292137  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcaca 295  Q
    ||||||   || |||||||||||||||||| |||||||||||||||    
T  32292136 cttcccggtaggtcacccatccaaagactactccaagtcaagcaca 32292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 2044354 - 2044203
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||||||  |||||||||||   || | || ||||||||||| |  |||||||||| |||| ||||||||| ||| || |||| |||| ||    
T  2044354 ctgtaacatcccaaacgactttaagcattggtgactgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaa 2044255  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||  || |||||||||||||||||| |||||||||||||| |||||    
T  2044254 acttcccattaggtcacccatccaaagactactccaagtcaagcacgcttaa 2044203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 32292652 - 32292542
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    ||||||||||||  |||||||||| |||| ||||||||| |||||| |||| |||| |||||||||   ||||||||||||||||||||| |||||||||    
T  32292652 tacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttcccggtagatcacccatccaaagactactccaagtca 32292553  T
Q  290 agcacacttaa 300  Q
    ||||| |||||    
T  32292552 agcacgcttaa 32292542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 8080232 - 8080343
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||| ||||||||| |  || | |||||||||||||||| ||||||||    
T  8080232 ctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctagtaggttacccatccaaagactactccaagtc 8080331  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  8080332 aagcacgcttaa 8080343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 15818908 - 15819010
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||  ||||||||||||| ||| ||  |||| |||||||||||||| ||| || ||||||||||| ||| ||||||||||    
T  15818908 acaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcacacttttcgggaaacttcccagaaggtcgcccatccaaagcctactccaagtcaa 15819007  T
Q  291 gca 293  Q
    |||    
T  15819008 gca 15819010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 34308786 - 34308891
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||||||||||| ||||||||    
T  34308786 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaa 34308885  T
Q  250 cttccc 255  Q
    ||||||    
T  34308886 cttccc 34308891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 34308330 - 34308435
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||| ||  |||||||||| |||| ||||||||| ||||||||||| ||||||||    
T  34308330 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaa 34308429  T
Q  250 cttccc 255  Q
    ||||||    
T  34308430 cttccc 34308435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 22548400 - 22548550
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| | ||||||    
T  22548400 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaa 22548499  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  22548500 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 22548550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 31283544 - 31283652
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||||| | ||||||||| ||| || |||| ||||||||||||||   || ||||||||||||| | |  || |||||||    
T  31283544 acaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaa-attgctcaaagtcaa 31283642  T
Q  291 gcacacttaa 300  Q
    ||||||||||    
T  31283643 gcacacttaa 31283652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 33852150 - 33852259
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    ||||| |||||| |||||||| | |||| ||||||||| ||| || ||||  |  ||||||| || | || |||||||||||||||||| ||||||||||    
T  33852150 acaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgcttatcatgaaactttccgataggtcacccatccaaagactactccaagtcaa 33852249  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  33852250 gcacgcttaa 33852259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 10729864 - 10729780
Alignment:
Q  204 agtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||| |||||||||||| | ||| || ||||||  ||| | |||||| ||| ||||||||| |||||||| ||||||||    
T  10729864 agtcttttcagcgtgctttgtccacactcgcacgctttctaggatatttcccataaggtcacccatcaaaagactactccaagtc 10729780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 17103336 - 17103272
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttccc 255  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||||||||    
T  17103336 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttccc 17103272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 22026675 - 22026524
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgcttt-gtcctcgctcacatgctttccgggaa 248  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  ||||||||||  ||| ||| |||||| ||| || |||| |||||||    
T  22026675 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccgggaa 22026576  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||| | || | |||||||| || | |  |||||||||||||| |||||    
T  22026575 acttcccgataggttacccatcccaatattgctccaagtcaagcacgcttaa 22026524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 27819168 - 27819247
Alignment:
Q  221 ttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||| |||||| |||||| || ||||||  || ||| ||||||||||||| |||| || ||||||| |||||||||    
T  27819168 ttgtcctcactcacacgctttctggaaaacttatcagaaggtcacccatccaaatactactcaaagtcaaacacacttaa 27819247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 34688092 - 34688053
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctc 228  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  34688092 ctacaaaccaacatgagtcttttcaacgtgttttgtcctc 34688053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 6464873 - 6464911
Alignment:
Q  262 tcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  6464873 tcacccatccaaagactactccaagtcaagcacgcttaa 6464911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 22548846 - 22548996
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  ||||| |||| |||| ||| ||||| ||| || |||| | ||||||    
T  22548846 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaa 22548945  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  22548946 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 22548996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 44042091 - 44042025
Alignment:
Q  234 catgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||| || ||| ||||||||||| |||| ||| ||||||||| | |||||||||||| |||||    
T  44042091 catgcttttcgagaagcttcccaaaaggtcactcattcaaagactacttcaagtcaagcacgcttaa 44042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 6466510 - 6466441
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaag 260  Q
    |||||||||||  |||||||| | |||||||||||||| |||  |||||||  | |||||||||||||||    
T  6466510 acaaaccaacacaagtctttttagcgtgctttgtcctcactcgtatgctttttgagaaacttcccaaaag 6466441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 9251139 - 9251058
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatg-ctttccgggaaacttcccaaaagatcacccatcc 271  Q
    |||||||||||  ||| |||||| |||| ||||||||| ||||||||  ||||| | ||||||||| |||| ||||||||||    
T  9251139 acaaaccaacacaagttttttcagcgtgttttgtcctcactcacatgtttttccagaaaacttccctaaaggtcacccatcc 9251058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 12100944 - 12100836
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| |  |||||||||||   || ||||||||||||| | |  ||||||||||    
T  12100944 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacgaggaaacttcccggtaggtcacccatccaaa-attgctccaagtcaa 12100846  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  12100845 gcacgcttaa 12100836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 27926193 - 27926088
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  |||||||||||   || | || |||||||||||||  |||||||||| | || ||||||||| ||| ||  ||| ||||||||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaa 27926094  T
Q  250 cttccc 255  Q
    ||||||    
T  27926093 cttccc 27926088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 16379232 - 16379082
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||| ||||||  |||||||||||   || | || |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| || |||||    
T  16379232 tgtaacattccaaacaactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaaa 16379133  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||| | || |||||||||||||||||| |||||||||||||| |||||    
T  16379132 cttcccgataggtcacccatccaaagactactccaagtcaagcacgcttaa 16379082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 1912819 - 1912669
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  ||||||||||| | || | || |||||||||||||  ||||||||||||||| ||||||||| ||| || |||| ||| ||||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaa 1912720  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || | ||||||||||||| || |||||||||| ||| |||||    
T  1912719 cttcccggtaggtaacccatccaaagagtactccaagtcaatcacgcttaa 1912669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 15640029 - 15639879
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  ||||||||||| | || | || |||| ||||||||  |||||||||  |||| ||||||||| ||| || ||||  || ||||    
T  15640029 tgtaacatcccagacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaaa 15639930  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  || |||||||||||||||||| |||||||||||||| |||||    
T  15639929 cttcccagtaggtcacccatccaaagactactccaagtcaagcacgcttaa 15639879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 30966527 - 30966379
Alignment:
Q  152 taacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaact 251  Q
    |||||||||| |||||||| || ||| | || | || | |||||||||||  ||||||||||||||| ||||||||| ||| ||||||| ||| ||||||    
T  30966527 taacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaact 30966428  T
Q  252 tcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||   || |||||||||| || | |  |||||||||||||| |||||    
T  30966427 tcccggtaggtcacccatcccaaaattggtccaagtcaagcacgcttaa 30966379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 15620149 - 15620043
Alignment:
Q  194 aaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagca 293  Q
    ||||||||  |||||||||| || | ||||||||| ||| || |||| ||| |||||||||||  || |||||||||||||||||| || ||||||||||    
T  15620149 aaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaacttcccagtaggtcacccatccaaagactactcaaagtcaagca 15620050  T
Q  294 cacttaa 300  Q
    | |||||    
T  15620049 cgcttaa 15620043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 32377758 - 32377908
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| |||| |||    
T  32377758 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaa 32377857  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  ||||||||||||| || | |  |||||||||| ||| |||||    
T  32377858 cttcccagtagatcacccatcccaaaattgctccaagtcaaacacgcttaa 32377908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 300
Target Start/End: Complemental strand, 16379671 - 16379538
Alignment:
Q  167 ctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacc 266  Q
    |||||||||||   |||| || |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| | | ||||||||||   || |||||    
T  16379671 ctttaagcattgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcacc 16379572  T
Q  267 catccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||||| || |||||||||| ||| |||||    
T  16379571 catccaaagattactccaagtcaaacacgcttaa 16379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 29259512 - 29259621
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||   || |||||||||| || | |  || |||||||    
T  29259512 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtcaa 29259611  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  29259612 gcacgcttaa 29259621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 25433906 - 25434057
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |   ||||||||||| | || | || |||||||||||||  | |||||||| |||| ||||||||  |||||| |||| || | ||    
T  25433906 ctgtaacatcccagatgactttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttaccagaaa 25434005  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||    | |||||||||||||||| | |||||||||||||| |||||    
T  25434006 acttccctgttggtcacccatccaaagaccactccaagtcaagcacgcttaa 25434057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 30966985 - 30966835
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  ||||||||||||||| ||||||||| ||| || |||| ||| ||||    
T  30966985 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaa 30966886  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  ||||||| |||||| |||||    
T  30966885 cttcccggtaggtcacccatcccaaaattgctccaagttaagcacgcttaa 30966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 25337848 - 25337998
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| || |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  25337848 tgtaacatctcagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 25337947  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  25337948 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 25337998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 33771255 - 33771153
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||  ||| ||||||||| ||| ||||||| ||||||||||||||   || |||||||||| || | |  ||||||||||    
T  33771255 acaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 33771156  T
Q  291 gca 293  Q
    |||    
T  33771155 gca 33771153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 24818579 - 24818471
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| || |||||||||||   || ||||||||||||| | |  ||||||||||    
T  24818579 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatccaaa-attgctccaagtcaa 24818481  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  24818480 gcacgcttaa 24818471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 30963155 - 30963264
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||||||  ||| ||||| ||| || |||||||| ||||||||| | ||| |||| ||||| || | |  ||||||||||    
T  30963155 acaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctttccgagaaacttccaagaaggtcactcatcccaaaattgctccaagtcaa 30963254  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  30963255 gcacgcttaa 30963264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 8256776 - 8256671
Alignment:
Q  195 accaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    |||||||| |||||||||| |||  ||||||||| ||| || ||||  ||| ||||||||||  || |||||||||| || | |  ||||||||||||||    
T  8256776 accaacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcac 8256677  T
Q  295 acttaa 300  Q
     |||||    
T  8256676 gcttaa 8256671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 150 - 301
Target Start/End: Original strand, 29038871 - 29039022
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  ||||||||||| | || | || |||||||||||||  |||||||||| |||| |||||||||  ||||| |||| ||||||||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaaa 29038970  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaaa 301  Q
    ||| ||   || ||| |||||||||||||| |||||||||||||| ||||||    
T  29038971 cttaccggtaggtcatccatccaaagactactccaagtcaagcacgcttaaa 29039022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 22529125 - 22529236
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||| |||||||||| |||  ||||||||| |||||| |||| ||| |||||||| ||  || |||||||||||||||||| ||||||||    
T  22529125 ctacaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaacttctcagtaggtcacccatccaaagactactccaagtc 22529224  T
Q  289 aagcacacttaa 300  Q
    || ||| |||||    
T  22529225 aaacacgcttaa 22529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 680111 - 679961
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgcttt-gtcctcgctcacatgctttccgggaa 248  Q
    |||||||||||| ||  |||||||||||  ||| | || |||||||||||||| |||||||||| |||| ||| || ||| ||| |||| || ||| |||    
T  680111 tgtaacatcccagacgactttaagcattgtagactgac-ctacaaaccaacatgagtcttttcagcgtgtttttgttctcactcgcatgtttaccgcgaa 680013  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||   || |||||||||||||||||| |||||||||||||| |||||    
T  680012 acttcccggcaggtcacccatccaaagactactccaagtcaagcacgcttaa 679961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 28496149 - 28495999
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||| |||||||| ||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  28496149 tgtaacattccaaactgttttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 28496050  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||| || |||||||||| || | |  |||||||||||||| |||||    
T  28496049 cttcccaataggtcacccatcccaaaattgctccaagtcaagcacgcttaa 28495999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 9623459 - 9623352
Alignment:
Q  193 aaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagc 292  Q
    |||||||||| ||||||| || |||||||||||||| |||  | ||||| | | ||||||| || ||  |||||||||||||||||| |||||||||| |    
T  9623459 aaaccaacatgagtctttacagcgtgctttgtcctcactcgaaggcttttcagaaaacttctcagaacgtcacccatccaaagactagtccaagtcaaac 9623360  T
Q  293 acacttaa 300  Q
    || |||||    
T  9623359 acgcttaa 9623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 6747457 - 6747535
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctc 228  Q
    |||||||||||| ||||||||||||||| | || | || |||||||||||||  |||||||||||| || |||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactgaccctacaaaccaacacaagtcttttcaacttgttttgtcctc 6747535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 26419127 - 26419211
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaag 275  Q
    |||||||||||  |||||||||||| || ||||||||| |||||||| ||| || |||| ||| || ||| ||||||||||||||    
T  26419127 acaaaccaacacgagtcttttcaacatgttttgtcctcactcacatgattttcgagaaaattctcagaaggtcacccatccaaag 26419211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 2193551 - 2193401
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| || |||||||| || ||| | || | || | ||||| |||||  |||||||||| |||| ||||||||| |||||| |||| ||||||||    
T  2193551 tgtaacatctcagactgctttcaggattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 2193452  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  ||||| |||||||| |||||    
T  2193451 cttcccggtaggtcacccatcccaaaattgctccaaatcaagcacgcttaa 2193401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 7646329 - 7646479
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||| ||||    
T  7646329 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaa 7646428  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  7646429 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 7646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 36422546 - 36422397
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  36422546 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 36422447  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  36422446 cttcccggtaggtcacccatcccaa-attgctccaagtcaagcacgcttaa 36422397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 42515387 - 42515237
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| || ||  ||||||||||| | || | || |||||||||||||  |||||||||| |||| ||||||||| | | || |||| |||  |||    
T  42515387 tgtaacatcacagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccgaaaaa 42515288  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
     ||||    |  |||||||||||||||||| |||||||||||||| |||||    
T  42515287 gttcctggtatgtcacccatccaaagactactccaagtcaagcacgcttaa 42515237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 2941649 - 2941758
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||| ||||| ||| || |||| ||||||||||||||   || |||||||||| || | |  ||||||||||    
T  2941649 acaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 2941748  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  2941749 gcacgcttaa 2941758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 26421680 - 26421761
Alignment:
Q  219 ctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||||| |||||||| |||||  ||||||||||| ||| ||||| |||||||||||| || ||| ||| ||| |||||    
T  26421680 ctttgtcctcactcacatgttttccaagaaacttcccataaggtcaccaatccaaagactactcgaagccaaacacgcttaa 26421761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 35474006 - 35474122
Alignment:
Q  184 taacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattcc 283  Q
    |||| |||||||||||||  |||| ||||| |||| ||||||||| ||| ||  ||| ||| |||| |||||   |  |||||||||||||||||| |||    
T  35474006 taaccctacaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaaattcccggtacgtcacccatccaaagactactcc 35474105  T
Q  284 aagtcaagcacacttaa 300  Q
    ||||||| ||| |||||    
T  35474106 aagtcaaacacgcttaa 35474122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 3305238 - 3305349
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    ||||||| |||||  |||||||||| |||| ||||| ||| ||| ||  ||| || |||||||| ||   || |||||||||||||||||| ||||| ||    
T  3305238 ctacaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaactttccggtaggtcacccatccaaagactactccaaatc 3305337  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  3305338 aagcacgcttaa 3305349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 34405497 - 34405592
Alignment:
Q  205 gtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||| |||| ||||||||| ||| || |||| ||||||||||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  34405497 gtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 34405592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 25182560 - 25182506
Alignment:
Q  246 gaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||||| ||| ||  |||||||||||||| |||||||||| |||||||||    
T  25182560 gaaacttcccagaaggtcctccatccaaagactactccaagtcaaacacacttaa 25182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 31743740 - 31743818
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctc 228  Q
    |||||||||||||||  |||||||||||   || |||| |||||||||||||  |||||||||| ||||| ||| ||||    
T  31743740 tgtaacatcccaaacgactttaagcattgtcgactaaccctacaaaccaacacgagtcttttcagcgtgcgttgacctc 31743818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 2189398 - 2189289
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    ||||| |||||  |||||| ||| |||| ||||||||| |||||| |||| ||||||||||||||   || |||| ||||| || | |  ||||||||||    
T  2189398 acaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcactcatcccaaaattgctccaagtcaa 2189299  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  2189298 gcacgcttaa 2189289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 29357346 - 29357447
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||| || ||||| || | ||||| ||  ||| ||| |||||  ||||||| || |||||    
T  29357346 ctacaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgcttttcgaggaacttaccggaaggtcatccatcttaagactactctaagtc 29357445  T
Q  289 aa 290  Q
    ||    
T  29357446 aa 29357447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 23943087 - 23943237
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  |||||||||||   || | || |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 23943186  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||    | |||||||||||||||||| |||||||||||||| |||||    
T  23943187 cttcccggttggtcacccatccaaagactactccaagtcaagcacgcttaa 23943237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 14571574 - 14571653
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatc 270  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  14571574 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatc 14571653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 1645594 - 1645744
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  ||||||||||| |  | | || |||||||||||||  ||||||||||||||| ||||||||| ||| || |||| |   ||||    
T  1645594 tgtaacatcccatacgactttaagcattgccaactgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttacaaagaaa 1645693  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||    || |||||||||||||||||| |||||||||||||| |||||    
T  1645694 cttcctggtaggtcacccatccaaagactactccaagtcaagcacgcttaa 1645744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 8467699 - 8467776
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcaccca 268  Q
    |||||||||||  ||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||| ||| |||||||    
T  8467699 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctttccgagaaacttcccataaggtcaccca 8467776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 9423743 - 9423853
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    |||| |||||||  |||||||||| |||| ||||||||| ||| |||||||  ||||||| |||||   || |||||||||| ||||||| ||||| |||    
T  9423743 tacacaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaacgggaaatttcccggtaggtcacccatcctaagactactccaattca 9423842  T
Q  290 agcacacttaa 300  Q
    |||||||||||    
T  9423843 agcacacttaa 9423853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 14572041 - 14572119
Alignment:
Q  192 caaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatc 270  Q
    ||||||||||  |||||||||| |||| ||||||||| |||||| |||||||| ||||||||||| ||| |||||||||    
T  14572041 caaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatc 14572119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 271
Target Start/End: Original strand, 4127263 - 4127384
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||| | |||||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| |||||| |||| ||||||||    
T  4127263 tgtaacattctaaactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 4127362  T
Q  250 cttcccaaaagatcacccatcc 271  Q
    |||||| | || ||||||||||    
T  4127363 cttcccgatagctcacccatcc 4127384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 7678466 - 7678617
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |||||||| ||||||   || | || | ||||||| |||  |||||||||| |||| ||||||||| ||| ||  ||| |||||||    
T  7678466 ctgtaacatcccagactgctttcagcattgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaa 7678565  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||   || |||||||||| || | |  ||||||||||||||||||||    
T  7678566 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacacttaa 7678617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 13613786 - 13613893
Alignment:
Q  193 aaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagc 292  Q
    |||||||||| ||||||| || |||||||||||||| |||  | ||||| | | ||||||| || ||  |||||||||||||||||| |||||||||| |    
T  13613786 aaaccaacatgagtctttacagcgtgctttgtcctcactcgaaggcttttcagaaaacttctcagaacgtcacccatccaaagactagtccaagtcaaac 13613885  T
Q  293 acacttaa 300  Q
    || |||||    
T  13613886 acgcttaa 13613893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 27578170 - 27578281
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||| ||||||  |||||||||| |||| ||||||||| ||| || | |||| ||||||||||||| ||| |||| ||||| || |||  ||||||||    
T  27578170 ctacaacccaacacgagtcttttcagcgtgttttgtcctcactcgcacgttttcagggaaacttcccataaggtcactcatcccaaaactgctccaagtc 27578269  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  27578270 aagcacgcttaa 27578281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 21068028 - 21067876
Alignment:
Q  148 cctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccggga 247  Q
    |||||||||||||| |   ||||||||||| | || |||  |||||||||||||  | | ||||||  ||| ||||||||| ||| || | || |||| |    
T  21068028 cctgtaacatcccagatgactttaagcattgccgactaagcctacaaaccaacacgaattttttcagtgtgttttgtcctcactcgcacgtttaccggta 21067929  T
Q  248 aacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||   || |||||||||||||||||| | |||||||||||| |||||    
T  21067928 aacttcccggtaggtcacccatccaaagactacttcaagtcaagcacgcttaa 21067876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 31817024 - 31817112
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagacta 279  Q
    |||||||| ||  |||||||||||| || ||||||||| |||  | |||||| ||||||||||||| ||  ||||||||||||||||||    
T  31817024 acaaaccagcacgagtcttttcaacatgttttgtcctcactcgtacgctttctgggaaacttcccagaatgtcacccatccaaagacta 31817112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 3169462 - 3169351
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  ||| ||||||||||| ||||||||| ||| || |||| ||  ||||||| |    || |||| ||||||||||||| ||||||||    
T  3169462 ctacaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttaccaagaaactttctggtaggtcactcatccaaagactactccaagtc 3169363  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  3169362 aagcacgcttaa 3169351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 13266381 - 13266231
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || |||   || | || | |||||||||||  |||||||||||| || ||| ||||| ||| ||  |||| ||| |||    
T  13266381 tgtaacatcccatactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcacacttttcggaaaa 13266282  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||||| |||||||||| || | |  || ||||||||||| |||||    
T  13266281 cttcccaaaaggtcacccatcctaaaatttctcaaagtcaagcacgcttaa 13266231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 35871881 - 35871772
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || | || ||||||||||| || | || |||||||||| || | |  ||||||||||    
T  35871881 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcccaaaattgctccaagtcaa 35871782  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  35871781 gcacgcttaa 35871772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 7381562 - 7381459
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  ||||||||||| | || | || |||||||||||||   ||||||||| |||| ||||||||| ||| || |||| |||| |||    
T  7381562 tgtaacatcccatacgactttaagcattgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaa 7381463  T
Q  250 cttc 253  Q
    ||||    
T  7381462 cttc 7381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 23942673 - 23942784
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||   ||| |||||||||| ||||||||| ||| || ||||    |||||||| ||   || ||| |||||||||||||| ||||||||    
T  23942673 ctacaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtc 23942772  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  23942773 aagcacgcttaa 23942784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 44470759 - 44470870
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  ||||||| || |||| ||||||||| ||| || |||| ||||||||||||||   || ||| |||||| || | |  ||||||||    
T  44470759 ctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaaccatcccaaaattgctccaagtc 44470858  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  44470859 aagcacgcttaa 44470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 21067577 - 21067427
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  |||||||||||   || | || | |||||| ||||  ||||||||||  ||| ||||||| | ||| || |||| ||| ||||    
T  21067577 tgtaacatcccagacgactttaagcattgtggactgacccaacaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaaa 21067478  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||| ||   || |||||| ||||||||||| |||||||||||||| |||||    
T  21067477 ctttccggtaggtcacccctccaaagactactccaagtcaagcacgcttaa 21067427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 27578793 - 27578875
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatcc 271  Q
    ||||||| |||||  |||||||||| | || ||||||||| ||| || |||||| ||||||||||||| ||| |||| |||||    
T  27578793 ctacaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctttctgggaaacttcccagaaggtcacgcatcc 27578875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 49998931 - 49998781
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||| ||||||||||||| || ||| | || |  | | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  49998931 tgtaacaccccaaactgctttcagaattgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 49998832  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||| ||| |||||    
T  49998831 cttcccggtaggtcacccatcccaaaattgctccaagtcaaacacgcttaa 49998781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 50398383 - 50398533
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| || |||||||| || ||| | || | || |||||||||||||  ||||||| ||  ||  ||||||||| ||| || |||| |||| |||    
T  50398383 tgtaacatctcagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaaa 50398482  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||  |||| || |||||||||||||| |||||    
T  50398483 cttcccggtaggtcacccatcataagaatactccaagtcaagcacgcttaa 50398533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 50398839 - 50398917
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctc 228  Q
    |||||||||||| |||||||| || ||| | || | || |||||||||||||  ||||||| ||||||| |||||||||    
T  50398839 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccaacgtgttttgtcctc 50398917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 4127775 - 4127836
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaactt 252  Q
    |||||||||||  |||||||||| |||| ||||||||| |||||| |||| |||| ||||||    
T  4127775 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaactt 4127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 12691909 - 12691994
Alignment:
Q  215 cgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||| ||||||||| ||| || |||| |||||||||||||||  || |||||||||| || | |  |||||||||||||| |||||    
T  12691909 cgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 12691994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 53996014 - 53996055
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgc 230  Q
    |||||||||||||  ||||||||||||||| |||||||||||    
T  53996014 ctacaaaccaacacgagtcttttcaacgtgttttgtcctcgc 53996055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 245802 - 245723
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatc 270  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  245802 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatc 245723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 245335 - 245257
Alignment:
Q  192 caaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatc 270  Q
    ||||||||||  |||||||||| |||| ||||||||| |||||| |||||||| ||||||||||| ||| |||||||||    
T  245335 caaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatc 245257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 1e-19; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20884968 - 20885118
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||||||  ||||||||||| |||| | || |||||||||||||  |||||||||| |||| ||||||||  ||  || ||||  |||||||    
T  20884968 tgtaacatcccaaacgactttaagcattgcagactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaaa 20885067  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
     |||||   || ||||||||||||| |||| |||||||||||||| |||||    
T  20885068 tttcccggtaggtcacccatccaaatactactccaagtcaagcacgcttaa 20885118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 30529981 - 30529832
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||| | ||  ||||||||||| | || |||| || ||||||||||  |||||||| | |||| ||||||||| ||| ||||||| | ||||||    
T  30529981 tgtaacatcctagacaactttaagcattgccgactaaccctgcaaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaaa 30529882  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||| |||  || |||||||||||||||||| |||||||||||||| |||||    
T  30529881 ctt-ccagtaggtcacccatccaaagactactccaagtcaagcacgcttaa 30529832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 7477441 - 7477343
Alignment:
Q  195 accaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagca 293  Q
    |||||||| ||||||||||||||||||||| ||| ||| || |||||||| |||| |||||| ||| ||| |||||| ||||||| || ||||||||||    
T  7477441 accaacatgagtcttttcaacgtgctttgttctcactcgcacgctttccgagaaatttcccataaggtcagccatcctaagactactctaagtcaagca 7477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 14820449 - 14820299
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||  ||||||| ||||||||    
T  14820449 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaa 14820350  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||| || | || |||||||||| || | | ||||||||||||||| |||||    
T  14820349 ctttccgataggtcacccatcccaaaattgttccaagtcaagcacgcttaa 14820299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 25238575 - 25238685
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    ||||||||||||  |||||||||| |||| ||||||||| ||| ||||||| ||   ||||||||| | || ||||| |||||||||||| |||||||||    
T  25238575 tacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccaaaaaacttcccgataggtcaccaatccaaagactactccaagtca 25238674  T
Q  290 agcacacttaa 300  Q
    ||||| |||||    
T  25238675 agcacgcttaa 25238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 37045328 - 37045180
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| ||  |||||||||||   || | || |||||||||||||  |||||||||| |||| ||||||||| ||| |||||||  ||||||    
T  37045328 ctgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcgggaa 37045229  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
       ||||   || |||||||||||||||||| |||||||||||||| |||||    
T  37045228 ---tcccggtaggtcacccatccaaagactactccaagtcaagcacgcttaa 37045180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 39653459 - 39653309
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  39653459 tgtaacatcccagactgcttttagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 39653360  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  ||||||||||||||||||||    
T  39653359 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacacttaa 39653309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 294
Target Start/End: Original strand, 25230099 - 25230243
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| |||||  |||||||||||   || | || |||||||||||||  ||||||| ||||||| ||||||||| ||| |  |||| |||| |||    
T  25230099 tgtaacatctcaaacgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaa 25230198  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    |||||  | || |||||||||  ||||||| ||||||||||||||    
T  25230199 cttcctgataggtcacccatcataagactactccaagtcaagcac 25230243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 294
Target Start/End: Original strand, 25237686 - 25237830
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| |||||  |||||||||||   || | || |||||||||||||  ||||||| ||||||| ||||||||| ||| |  |||| |||| |||    
T  25237686 tgtaacatctcaaacgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaa 25237785  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    |||||  | || |||||||||  ||||||| ||||||||||||||    
T  25237786 cttcctgataggtcacccatcataagactactccaagtcaagcac 25237830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 7494131 - 7494033
Alignment:
Q  195 accaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagca 293  Q
    |||||||| ||||||||||||||||||||| ||| ||| || ||||| ||||||| |||| | ||| ||| |||| | ||||| | |||||||||||||    
T  7494131 accaacatgagtcttttcaacgtgctttgttctcactcgcacgctttacgggaaatttcctagaaggtcagccatgctaagacaactccaagtcaagca 7494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 25230556 - 25230706
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||| ||||  ||||| |||||  ||| | || |||||||||||||  ||||||| || |||| ||||  ||| ||| || |||| ||||||||    
T  25230556 tgtaacatcctaaacgactttatgcattgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaa 25230655  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  ||  ||||||||  ||||||| |||||||||||||| |||||    
T  25230656 cttcccagtagggcacccatcataagactactccaagtcaagcacgcttaa 25230706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 25238143 - 25238293
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||| ||||  ||||| |||||  ||| | || |||||||||||||  ||||||| || |||| ||||  ||| ||| || |||| ||||||||    
T  25238143 tgtaacatcctaaacgactttatgcattgtagactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaa 25238242  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||  ||  ||||||||  ||||||| |||||||||||||| |||||    
T  25238243 cttcccagtagggcacccatcataagactactccaagtcaagcacgcttaa 25238293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 11179887 - 11180035
Alignment:
Q  152 taacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaact 251  Q
    |||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||||||  ||| |||||||||     
T  11179887 taacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaaca 11179986  T
Q  252 tcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||   || |||||||||| || | |  |||||||||||||| |||||    
T  11179987 tcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 11180035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 8067576 - 8067425
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |||||||| || ||| | || | ||   |||||||||||  |||||||||| |||| ||||||||| ||| || ||||  ||||||    
T  8067576 ctgtaacatcccagactgcttttaggattgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcgggaa 8067477  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  8067476 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 8067425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 16811674 - 16811526
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||  ||||||||| ||| |||||||  |||||||    
T  16811674 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgt--tttgtcctcactcgcatgcttatcgggaaa 16811577  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  16811576 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 16811526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 32227796 - 32227645
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |||||||| ||||||   || | || |||||||||||||  ||||||||||| ||| ||| ||||| ||| ||  |||  ||||||    
T  32227796 ctgtaacatcccagactgctttcagcattgtcgactgaccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcgggaa 32227697  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  32227696 acttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 32227645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 13150405 - 13150555
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | ||||| |||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  13150405 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 13150504  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  13150505 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 13150555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 32227072 - 32227222
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  ||||||||||| ||| ||| ||||| ||| ||  ||| ||||||||    
T  32227072 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaaa 32227171  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  32227172 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 32227222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 300
Target Start/End: Original strand, 4067228 - 4067361
Alignment:
Q  167 ctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacc 266  Q
    ||||||||||| | || | || |||||||||||||   ||||||||| |||| ||||||||| ||  || |||| || | |||||| ||   || ||| |    
T  4067228 ctttaagcattgccgactgaccctacaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttaccagaaaactttccggtaggtcatc 4067327  T
Q  267 catccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||||||| |||||||||||||| |||||    
T  4067328 catccaaagactactccaagtcaagcacgcttaa 4067361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 28562040 - 28561935
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| || |||||||| |  ||||| || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  28562040 tgtaacatctcatactgctttcaagattaccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 28561941  T
Q  250 cttccc 255  Q
    ||||||    
T  28561940 cttccc 28561935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 14814244 - 14814144
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || |||| | |||||||||||  |||||||||| |||| |||||| || ||| || |||| ||||||||    
T  14814244 tgtaacatcccagactgctttcagtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaaa 14814145  T
Q  250 c 250  Q
    |    
T  14814144 c 14814144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 25802910 - 25803005
Alignment:
Q  205 gtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||| | || ||| |||||  ||||| ||||||| | |||| || || ||| |||||||||| ||||||| |||||||||||||| |||||    
T  25802910 gtcttttcagcatgatttttcctcattcacacgctttccagaaaacatctcataaggtcacccatcctaagactagtccaagtcaagcacgcttaa 25803005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 25248348 - 25248262
Alignment:
Q  208 ttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    ||||||||||| ||||||||| ||| || |||| ||| ||||||||||   || ||| |||||  ||||||| ||||||||||||||    
T  25248348 ttttcaacgtgttttgtcctcactcgcacgcttaccgtgaaacttcccggtaggtcatccatcataagactactccaagtcaagcac 25248262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 25802399 - 25802549
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||| |||||  |||||||||||   || | || |||||||||||||   ||||||||| |||| |||| |||  ||| ||  |||| || ||||    
T  25802399 tgtaacatctcaaacgactttaagcattgttgactgaccctacaaaccaacacacgtcttttcagcgtgttttgaccttactcgcactcttttcgagaaa 25802498  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||| | ||| |||||| ||| ||||||| |||||||||| ||| |||||    
T  25802499 cttcctagaaggtcacccgtcctaagactactccaagtcaaacacgcttaa 25802549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 50348041 - 50347891
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  |||  |||||||    
T  50348041 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcgggaaa 50347942  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||| |   || |||||||||| || | |  |||||||||||||| |||||    
T  50347941 cttctcggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 50347891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 7e-18; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 23986167 - 23986318
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| ||||  || ||||| ||| || |||||||| |||    
T  23986167 ctgtaacatcccatactgctttcagaattgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctttccgtgaa 23986266  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||| ||| |||||||||| || | |  ||||||||||||||||||||    
T  23986267 acttcccagaaggtcacccatcccaaaattgctccaagtcaagcacacttaa 23986318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 17027382 - 17027532
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| |||||| |||| ||||||||    
T  17027382 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 17027481  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  17027482 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 17027532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 2720468 - 2720564
Alignment:
Q  204 agtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||| ||| |||| ||||| ||| ||| || ||||  ||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||    
T  2720468 agtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaacttcccaatatgtcacccatccaaagactactccaagtcaagcacacttaa 2720564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 3652779 - 3652675
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| | |  ||||||||| ||| || |||| ||||||| ||||||   || |||||||||||||||||| ||||||||    
T  3652779 ctacaaaccaacaagagtcttttcagctttttttgtcctcactcgcacgcttaccgggaagcttcccggtaggtcacccatccaaagactactccaagtc 3652680  T
Q  289 aagca 293  Q
    |||||    
T  3652679 aagca 3652675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 3653175 - 3653048
Alignment:
Q  168 tttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcaccc 267  Q
    |||||||||| | || | || ||||||||||| |  |||||||||| |||| ||||||||||| |    ||||  ||||||||||| | | || ||||||    
T  3653175 tttaagcattgccgattgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcgcac----gcttatcgggaaacttctcgataggtcaccc 3653080  T
Q  268 atccaaagactattccaagtcaagcacactta 299  Q
    |||||||||||| |||||||||||||| ||||    
T  3653079 atccaaagactactccaagtcaagcacgctta 3653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 20850616 - 20850466
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||| |||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20850616 tgtaacaccccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20850517  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20850516 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20850466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 11062522 - 11062430
Alignment:
Q  208 ttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||| |||| ||||||||| |||||  | ||  |||||||||| || | || |||||||||||||||||| |||||||||||||| |||||    
T  11062522 ttttcagcgtgttttgtcctcactcacgggtttatcgggaaactttccgataggtcacccatccaaagactactccaagtcaagcacgcttaa 11062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 294
Target Start/End: Complemental strand, 21312266 - 21312122
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| ||  |||||||||||   || | || ||||||||||||| |||||||||||| ||| |||||| || || |||  ||| ||||||||    
T  21312266 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacaccagtcttttcaatgtgttttgtcttcacttacacacttaccgggaaa 21312167  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    ||||||   || |||| ||||  ||||||  ||||||||||||||    
T  21312166 cttcccggtaggtcactcatcataagactgctccaagtcaagcac 21312122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 2890729 - 2890840
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||| | |||| ||||||||| ||| || ||||  ||||||||||| ||  || |||||||||| |  |||||| ||||||    
T  2890729 ctacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaacttctcagtaggtcacccatcctagtactatttcaagtc 2890828  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  2890829 aagcacgcttaa 2890840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 14771609 - 14771720
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||| |||||| ||| |||| |||||||||||||  | | || | || |||||||| |  || |||| ||||||||||||| |||| |||    
T  14771609 ctacaaaccaacatgagtcttatcagcgtgttttgtcctcgctcgtacgtttactggtaaacttccgagtaggtcactcatccaaagactactccacgtc 14771708  T
Q  289 aagcacacttaa 300  Q
     |||||||||||    
T  14771709 tagcacacttaa 14771720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 17851613 - 17851519
Alignment:
Q  206 tcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||| | |||| |||| |||||||| || |||  | || |||| |||||| ||||||||||||| ||||||| |||||||||||||| |||||    
T  17851613 tctttttaccgtgttttgccctcgctcgcacgctaacgggaaaacctcccaatagatcacccatccgaagactactccaagtcaagcacgcttaa 17851519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 300
Target Start/End: Original strand, 2891162 - 2891294
Alignment:
Q  167 ctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacc 266  Q
    ||||||||||| | || | || |||||||||||||  | |||||||| |||| ||||||||| ||| || |||| |||| |||| ||  |  || |||||    
T  2891162 ctttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgcttaccgg-aaacatcgtagtaggtcacc 2891260  T
Q  267 catccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||||||| ||||| ||||||||| ||||    
T  2891261 catccaaagactactccaaatcaagcacatttaa 2891294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 7912602 - 7912461
Alignment:
Q  153 aacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaactt 252  Q
    ||||||||| | |||||| || ||| | || |||| | |||||||||||| |||||||||| |||| ||||||||| |||  | ||||  ||||||||||    
T  7912602 aacatcccagattgctttcaggattgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgcttaacgggaaactt 7912503  T
Q  253 cccaaaagatcacccatccaaagactattccaagtcaagcac 294  Q
    ||||  || |||||||| | || | |  ||||||||||||||    
T  7912502 cccagcaggtcacccattccaaaattgctccaagtcaagcac 7912461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 1991807 - 1991708
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    ||||| |||||  ||| |||||| ||| ||||||| || |||||||||||| ||| ||||||  || ||| ||||||||||||| |||| ||||| ||||    
T  1991807 acaaatcaacacgagttttttcagcgtactttgtcttcactcacatgcttttcggaaaacttttcagaaggtcacccatccaaaaactactccaaatcaa 1991708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 293
Target Start/End: Complemental strand, 7912173 - 7912030
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || |||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||||||| ||| |||     
T  7912173 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaat 7912074  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagca 293  Q
    ||||||   || |||||||||| || | |  |||||||||||||    
T  7912073 cttcccggtaggtcacccatcccaaaattgctccaagtcaagca 7912030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 17851174 - 17851063
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  ||||||||| || || ||||||||  ||| || || | |  ||||||||||||  || || ||||||| ||||||| ||||||||    
T  17851174 ctacaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgcgtactaggaaacttcccagtaggtctcccatccgaagactactccaagtc 17851075  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  17851074 aagcacgcttaa 17851063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 1552 - 1702
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||||  || | || | |||||||||||  |||||||| | |||| ||||||||| ||||||||||| ||||||||    
T  1552 tgtaacatcccagactgctttcaggattatcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccgggaaa 1651  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  1652 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 1702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 19261 - 19111
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| |||||| |||| ||||||||    
T  19261 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaa 19162  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  19161 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 19111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 3e-17; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 43057414 - 43057524
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    ||||||||||||  |||||||| | |||| ||||| ||| ||||||||||| |||||||||||||||  || ||||| |||||||||| | |||||||||    
T  43057414 tacaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaacttcccagtaggtcaccgatccaaagaccactccaagtca 43057513  T
Q  290 agcacacttaa 300  Q
    | ||| |||||    
T  43057514 atcacgcttaa 43057524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 50002926 - 50003076
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  50002926 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 50003025  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || ||||||||||||| | |  |||||||||||||| |||||    
T  50003026 cttcccggtaggtcacccatccaaaaattgctccaagtcaagcacgcttaa 50003076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 43056955 - 43057066
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  ||| ||||||  ||| ||||||||| ||| ||||||| |||||||||||||||  || |||||||||||||||| | || |||||    
T  43056955 ctacaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccagtaggtcacccatccaaagaccactctaagtc 43057054  T
Q  289 aagcacacttaa 300  Q
    || ||| |||||    
T  43057055 aatcacgcttaa 43057066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20054387 - 20054537
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20054387 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20054486  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20054487 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20054843 - 20054993
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20054843 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20054942  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20054943 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20055299 - 20055449
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20055299 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20055398  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20055399 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20055449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20055755 - 20055905
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20055755 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20055854  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20055855 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20055905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20056211 - 20056361
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20056211 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20056310  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20056311 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20056361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20057114 - 20057264
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20057114 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20057213  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20057214 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20057264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20057570 - 20057720
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20057570 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20057669  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  20057670 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 20057720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 38341202 - 38341051
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    ||||||||||||| |||||||| || ||| | || | || | | |||||||||  |||||||||  |||| ||||||||| ||| || |||| |||||||    
T  38341202 ctgtaacatcccagactgctttcaggattgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccgggaa 38341103  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||||  || |||||||||| || | |  |||||||||||||| |||||    
T  38341102 acttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 38341051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 20056667 - 20056817
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||| | || | || | |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  20056667 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 20056766  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||| ||| |||||    
T  20056767 cttcccggtaggtcacccatcccaaaattgctccaagtcaaacacgcttaa 20056817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 20845553 - 20845662
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||||||||   || |||||||||| || | |  ||||||||||    
T  20845553 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaatttctccaagtcaa 20845652  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  20845653 gcacgcttaa 20845662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 2634721 - 2634617
Alignment:
Q  190 tacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtca 289  Q
    ||||||| ||||  |||||||||| |||||||  |||||  || ||||||||  || |||||||||| ||  ||| |||||||||||||| |||||||||    
T  2634721 tacaaacaaacaagagtcttttcagcgtgcttcatcctcattcgcatgctttttggaaaacttcccagaatgtcatccatccaaagactactccaagtca 2634622  T
Q  290 agcac 294  Q
    |||||    
T  2634621 agcac 2634617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 20060190 - 20060341
Alignment:
Q  149 ctgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaa 248  Q
    |||||||| |||| |||||||| || ||| | || | || | |||||||||||  ||||||| || |||| ||||||||| ||| || |||| |||| ||    
T  20060190 ctgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaaa 20060289  T
Q  249 acttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||   || |||||||||| || | |  ||||||||||||||||||||    
T  20060290 acttcccggtaggtcacccatcccaaaattgatccaagtcaagcacacttaa 20060341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 52250501 - 52250396
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  52250501 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 52250402  T
Q  250 cttccc 255  Q
    ||||||    
T  52250401 cttccc 52250396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 35009959 - 35009997
Alignment:
Q  262 tcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  35009959 tcacccatccaaagactactccaagtcaagcacgcttaa 35009997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 52250838 - 52250688
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| |||||| || ||| ||  ||| ||||||||    
T  52250838 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaa 52250739  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  | |||||||||||| |||||    
T  52250738 cttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgcttaa 52250688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 52251175 - 52251025
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   || | || | |||||||||||  |||||||||| |||| |||||| || ||| ||  ||| ||||||||    
T  52251175 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaa 52251076  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  | |||||||||||| |||||    
T  52251075 cttcccggtaggtcacccatcccaaaattgcttcaagtcaagcacgcttaa 52251025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 1515 - 1365
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || |||   || | |||| |||||||||||  |||||||||| |||| ||||||||| ||| || |||| ||||||||    
T  1515 tgtaacatcccagactgctttcaggattgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa 1416  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  1415 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 1365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 292
Target Start/End: Original strand, 69666 - 69808
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    ||||||||||||||||||||| || ||| | || | |  | |||||||||||  |||||||| | |||| |||||| || |||||| |||||||   |||    
T  69666 tgtaacatcccaaactgctttcaggattgccgactgaaccaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctttcccataaa 69765  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagc 292  Q
    ||||||  ||| |||||||||||||||||| ||| ||||||||    
T  69766 cttccctgaaggtcacccatccaaagactactcctagtcaagc 69808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 163026 - 163135
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| |||  | |||| ||| |||||||||| | || |||||||||| || | |  ||||||||||    
T  163026 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaaacttcccgataggtcacccatcccaaaattgctccaagtcaa 163125  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  163126 gcacgcttaa 163135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 163327 - 163216
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| |||| ||||||||| ||| || |||| | |||||||||| |   || |||||||||| || | |  ||||||||    
T  163327 ctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttctcggtaggtcacccatcccaaaattgctccaagtc 163228  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  163227 aagcacgcttaa 163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 300
Target Start/End: Original strand, 18025 - 18136
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    ||||||| |||||  |||||||||| |||| | ||||||| ||| || | || |||  |||||| |||| || |||||||||||||||||| ||||||||    
T  18025 ctacaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccgaaaaactttccaataggtcacccatccaaagactactccaagtc 18124  T
Q  289 aagcacacttaa 300  Q
    |||||| |||||    
T  18125 aagcacgcttaa 18136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 17493 - 17599
Alignment:
Q  194 aaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaagca 293  Q
    ||||||||  |||||||||| |||| ||||||||| ||| || |||| |||  |||||| | |  || ||||||||||||||| || |||||||||||||    
T  17493 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaactttcgagtaggtcacccatccaaagagtactccaagtcaagca 17592  T
Q  294 cacttaa 300  Q
    | |||||    
T  17593 cgcttaa 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 564 - 455
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| |||||||||||  |||||||||||||   || |||||||||| || | |  |||| |||||    
T  564 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctccatgtcaa 465  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  464 gcacgcttaa 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 1943 - 2052
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||  ||||||||| ||| || |||| ||||||||||||||   || |||||||||| || | |  ||||||||||    
T  1943 acaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 2042  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  2043 gcacgcttaa 2052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 2102 - 2211
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  ||||||||||| ||| ||||||||| ||| || |||| |||| |||||||||   || |||||||||| || | |  ||||||||||    
T  2102 acaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 2201  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  2202 gcacgcttaa 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 10553 - 10445
Alignment:
Q  191 acaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtcaa 290  Q
    |||||||||||  |||||||||| |||| ||||||||| ||| || |||| || |||||||||||   || ||||||||||||| | |  ||||||||||    
T  10553 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatccaaa-attgctccaagtcaa 10455  T
Q  291 gcacacttaa 300  Q
    |||| |||||    
T  10454 gcacgcttaa 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 4816 - 4706
Alignment:
Q  189 ctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccatccaaagactattccaagtc 288  Q
    |||||||||||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||||||||   || |||||||||| || | |  |||||||     
T  4816 ctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa-attgctccaagtt 4718  T
Q  289 aagcacacttaa 300  Q
    ||||||||||||    
T  4717 aagcacacttaa 4706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 14553 - 14703
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| ||||||   |  | || | |||||||||||  |||||||||| | || ||||||||| ||| ||  ||| ||||||||    
T  14553 tgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaa 14652  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || |||||||||| || | |  |||||||||||||| |||||    
T  14653 cttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaa 14703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 3037 - 2887
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||| | |||||||| |||||| | || | || | ||||| |||||  |||||||||| |||| ||||||||| ||| ||  ||| ||||||||    
T  3037 tgtaacatccgagactgctttcagcattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa 2938  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   || || ||||||| || | |  |||||||||||||| |||||    
T  2937 cttcccggtaggtctcccatcccaaaattgctccaagtcaagcacgcttaa 2887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 300
Target Start/End: Original strand, 107314 - 107464
Alignment:
Q  150 tgtaacatcccaaactgctttaagcattacagaataacgctacaaaccaacatcagtcttttcaacgtgctttgtcctcgctcacatgctttccgggaaa 249  Q
    |||||||||||| |||||||| || ||  | || | || | |||||||||||  |||||||||| | || ||||||||| ||| || |||| ||||||||    
T  107314 tgtaacatcccagactgctttcagaatagccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgggaaa 107413  T
Q  250 cttcccaaaagatcacccatccaaagactattccaagtcaagcacacttaa 300  Q
    ||||||   |  |||||||||| || | |  |||||||||||||| |||||    
T  107414 cttcccggtacgtcacccatcccaaaattgctccaagtcaagcacgcttaa 107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 7167 - 7118
Alignment:
Q  220 tttgtcctcgctcacatgctttccgggaaacttcccaaaagatcacccat 269  Q
    ||||||| | |||||||||||| |||||||||| ||||||| ||||||||    
T  7167 tttgtccccactcacatgcttttcgggaaactttccaaaaggtcacccat 7118  T

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