View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5075_high_8 (Length: 323)
Name: NF5075_high_8
Description: NF5075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5075_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 35617609 - 35617923
Alignment:
| Q |
9 |
accacagacttctgcaacggtggagtctcatgcaaatctgattcaatcacttgatgcttcctcgaatcatagcaaggaagaaataaacgacggaagggat |
108 |
Q |
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| T |
35617609 |
accacagacttctgcaacggtggagtctcatgcaaatctgattcaatcacttgatgcttcctcgaatcatagcaaggaagaaataaacgacagaagggat |
35617708 |
T |
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| Q |
109 |
tttgaggtaactgagagagcaaggaatgacaagaatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacaaaaacagtca |
208 |
Q |
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| T |
35617709 |
tttgaggtaactgagagagcaaggaatgacaagaatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacaaaagcagtca |
35617808 |
T |
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| Q |
209 |
agtttccagtttacgatactgggatattggaggaggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgcaggaagatcttaaaca |
308 |
Q |
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||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
35617809 |
agtttccggtttgcgatactgggataatggaggaggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgaaggaagatcttaaaca |
35617908 |
T |
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| Q |
309 |
tggtactagtactac |
323 |
Q |
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||||||||||||||| |
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| T |
35617909 |
tggtactagtactac |
35617923 |
T |
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