View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5076-Insertion-5 (Length: 513)
Name: NF5076-Insertion-5
Description: NF5076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5076-Insertion-5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 8 - 513
Target Start/End: Complemental strand, 1291164 - 1290664
Alignment:
| Q |
8 |
gaatacactggtaacaaatacttctaccccaagaaactctgttagagaaagtgaaaagacctatatatgcctctttaaagtccaacttacccgatttgga |
107 |
Q |
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| T |
1291164 |
gaatacactgagaacaaatacttctaccccaagaaactctgttagagaaaatgaaaagaccgatatatggctctttaaagtccaacttacccgatttgga |
1291065 |
T |
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| Q |
108 |
actatccaaaaccctagaatcgacaataggattagaaggaataaccatagtggcatagtcatatataatatcagaacaaactcaaaggatcttatcctgc |
207 |
Q |
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| T |
1291064 |
actatccaaaaccctagaatcgacaataggattagaaggaataagcatagtg----agtcatatataatatcagaacaaactcaaaggatcttatccagc |
1290969 |
T |
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| Q |
208 |
atgatgtcaggtaagtcacactcaccatctttgataaaatcagcaactatgtattgaactaaggaaatactagtcttttcaatgtcaataacaatcacaa |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
1290968 |
atgatgtcaggtaagtcacactcaccatctttgataaaatcagcaactatgtattgaactaaggaaatactagtcttttcaatgtcaataaca-tcacaa |
1290870 |
T |
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| Q |
308 |
attctatcatgcaaccatttgtcagaccatattgatacgttgttgccatctccaagcttctgagaactgttctttaagatgaccatcaacatctttccta |
407 |
Q |
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||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1290869 |
attctattatgcaaccatttgttagaccttattgatacgttgttgccatctccaagcttctgagaactgttctttaagatgaccatcaacatctttccta |
1290770 |
T |
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| Q |
408 |
aacaaagccaaatggatgatttaatgtaaccctactcaaggttattgttgatgaagaatctcgtataaagagtattggaacattgatgattattagttat |
507 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
1290769 |
aacaaagccaaatggatgatttaatgtaaccctactcaaggttattgttgatgaagaatctcgtataaagagtattggaacattgattattattagttat |
1290670 |
T |
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| Q |
508 |
taattc |
513 |
Q |
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| T |
1290669 |
taattc |
1290664 |
T |
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