View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5076_high_59 (Length: 236)

Name: NF5076_high_59
Description: NF5076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5076_high_59
NF5076_high_59
[»] scaffold0257 (1 HSPs)
scaffold0257 (1-219)||(19653-19871)
[»] chr3 (28 HSPs)
chr3 (1-219)||(28187212-28187430)
chr3 (1-219)||(28057738-28057956)
chr3 (1-219)||(28068163-28068381)
chr3 (1-219)||(17743867-17744085)
chr3 (1-219)||(19045187-19045405)
chr3 (7-219)||(8538478-8538690)
chr3 (1-219)||(28163202-28163420)
chr3 (1-221)||(11421775-11421995)
chr3 (6-221)||(28152203-28152418)
chr3 (7-221)||(27920758-27920972)
chr3 (1-221)||(27954727-27954947)
chr3 (7-218)||(28038066-28038277)
chr3 (55-219)||(27430393-27430557)
chr3 (6-218)||(27777095-27777307)
chr3 (7-219)||(30993891-30994099)
chr3 (102-219)||(18078689-18078806)
chr3 (4-218)||(26203983-26204197)
chr3 (38-218)||(28508432-28508612)
chr3 (4-218)||(26109691-26109905)
chr3 (38-216)||(26138609-26138787)
chr3 (38-218)||(26232069-26232249)
chr3 (58-218)||(28479269-28479429)
chr3 (17-218)||(26126481-26126682)
chr3 (17-218)||(26176532-26176733)
chr3 (78-218)||(27458261-27458401)
chr3 (4-182)||(28136907-28137085)
chr3 (66-111)||(8549708-8549753)
chr3 (1-92)||(27356921-27357012)
[»] chr2 (4 HSPs)
chr2 (1-209)||(8021399-8021607)
chr2 (1-218)||(22400709-22400926)
chr2 (1-218)||(22965886-22966103)
chr2 (1-188)||(22792443-22792630)
[»] scaffold0922 (1 HSPs)
scaffold0922 (7-219)||(2291-2503)
[»] scaffold1147 (1 HSPs)
scaffold1147 (1-171)||(873-1043)
[»] chr7 (1 HSPs)
chr7 (66-218)||(8692444-8692596)


Alignment Details
Target: scaffold0257 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 19871 - 19653
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19871 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccacatttgcgca 19772  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  19771 catcttgtagtaactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgta 19672  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  19671 ggcataacccttgtatctg 19653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28187430 - 28187212
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||    
T  28187430 aacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcgcgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgca 28187331  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  28187330 catcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaatttcaatagctcagctaggcagttgta 28187231  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  28187230 ggcataacccttgtatctg 28187212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28057956 - 28057738
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||| | |||||||||||||| |||||||||||||||||||||||    
T  28057956 aacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaaacgcgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgca 28057857  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  28057856 catcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgta 28057757  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  28057756 ggcataacccttgtatctg 28057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28068381 - 28068163
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||| | |||||||||||||| |||||||||||||||||||||||    
T  28068381 aacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaaacgcgtttttcaatatcatccaaccattccttatcaaaaccaaatttgcgca 28068282  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  28068281 catcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaatttcaatagctcagctaggcaattgta 28068182  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  28068181 ggcataacccttgtatctg 28068163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 17743867 - 17744085
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||| ||||||    
T  17743867 aacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaaccatttcttatcaaaaggaaatctgcgca 17743966  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||| |||||    
T  17743967 catcttgtaataactcgacaaattcagagttgcttgaacctaacacatccaacacactacgagtttgaaggaatttcaatagctcagctaggcaattgta 17744066  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  17744067 ggcataacccttgtatctg 17744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19045187 - 19045405
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||| ||||||    
T  19045187 aacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaaccatttcttatcaaaaggaaatctgcgca 19045286  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||| |||||    
T  19045287 catcttgtaataactcgacaaattcagagttgcttgaacctaacacatccaacacactacgagtttgaaggaatttcaatagctcagctaggcaattgta 19045386  T
Q  201 ggcataacccttgtatctg 219  Q
    |||||||||||||||||||    
T  19045387 ggcataacccttgtatctg 19045405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 8538478 - 8538690
Alignment:
Q  7 ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt 106  Q
    ||||||||||||| |||||||| |||| || |||||||||||||||||||||| |||  ||||||||| | ||||||||||||| |||| ||||||||||    
T  8538478 ttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcttttcaacacgatccaaccaatccttatcaaaaccacattttcgcacatctt 8538577  T
Q  107 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  8538578 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacaatatgagtttggaggaatttcaatagctcagctagacagttgtaggcata 8538677  T
Q  207 acccttgtatctg 219  Q
    |||||||||||||    
T  8538678 acccttgtatctg 8538690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28163420 - 28163202
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||| ||||| |||   |||| ||||      
T  28163420 aacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcgcgcttttcgatatcatccaaccattccttatgaaatggaaatctgcgtg 28163321  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| || |||||    
T  28163320 catcttgtagtaactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaatttcaatagctccgctagacaattgta 28163221  T
Q  201 ggcataacccttgtatctg 219  Q
    || ||||||||||||||||    
T  28163220 ggtataacccttgtatctg 28163202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11421995 - 11421775
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||  || ||||||  |||| | ||||    
T  11421995 aacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaaccattctttgtcaaaaggaaatctacgca 11421896  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    ||||||||| |||||||||||||  ||| |  |||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  11421895 catcttgtattaactcaacaaatgtagagtttcttgaacctaacacgtctaacacactatgggtctggaggaatttcaatagctcagctaggcaattgta 11421796  T
Q  201 ggcataacccttgtatctgct 221  Q
    |||||||||||||||||||||    
T  11421795 ggcataacccttgtatctgct 11421775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 28152418 - 28152203
Alignment:
Q  6 tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct 105  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||||| |||| |||||||||||||| | |||||||||   |||| | |||||||||    
T  28152418 tttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcatttcaacatcatccaaccactccttatcaaacggaaatctacgcacatct 28152319  T
Q  106 tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat 205  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||| |||||||||||    
T  28152318 tgtaataactcaacaaattcagagttgcttgaacctaacacatccaacacactatgagtttgaaggaatttcaatagctctgctaggctgttgtaggcat 28152219  T
Q  206 aacccttgtatctgct 221  Q
    ||||||||||||||||    
T  28152218 aacccttgtatctgct 28152203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 27920972 - 27920758
Alignment:
Q  7 ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt 106  Q
    ||||||||||||| || ||||| |||| |  || || |||||||||||||||| ||| |||||||||| |  |||||||||||| || ||||||||||||    
T  27920972 ttttgcaatgcattttcagagaattgtaattcatgagacaaagcgcgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcgcacatctt 27920873  T
Q  107 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata 206  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||  |||||| ||||||||||||||||||| |||    
T  27920872 gtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttgtaggaata 27920773  T
Q  207 acccttgtatctgct 221  Q
    |||||||||||||||    
T  27920772 acccttgtatctgct 27920758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27954947 - 27954727
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||| |||||||||||||| |||||||| |||| |  ||  | |||||||| ||||||| ||| |||||||||| |  |||||||||||| || ||||||    
T  27954947 aacagtttttgcaatgcattttgagagaattgtaattcataagacaaagcgtgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcgca 27954848  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||  |||||| |||||||||||||||||    
T  27954847 catcttgtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttgta 27954748  T
Q  201 ggcataacccttgtatctgct 221  Q
    || ||||||||||||||||||    
T  27954747 ggaataacccttgtatctgct 27954727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 28038277 - 28038066
Alignment:
Q  7 ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt 106  Q
    ||||||||||||| |||||||| || | || ||||||||||||| |||||||| ||| |||| ||||| |  ||||| |||| | || ||||||||||||    
T  28038277 ttttgcaatgcattttgagagaattttaaatcaggaaacaaagcacgcttttcgacaccatcaaaccaatctttatcgaaactacatctgcgcacatctt 28038178  T
Q  107 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata 206  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||    
T  28038177 gtaacaactcaacaaattcagtgtggcttgaacctaacacatccaacacactatgcgtttggaggaatttcaatagatcgactaggcagttgtaagcata 28038078  T
Q  207 acccttgtatct 218  Q
    || |||||||||    
T  28038077 actcttgtatct 28038066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 27430393 - 27430557
Alignment:
Q  55 ttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaaca 154  Q
    ||||| ||| |||||||||||| ||||||||||  |||| | |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  27430393 ttttcaacaccatccaaccattccttatcaaaaggaaatctacgcacatcttgtaataactcaacaaattcagagtggcttgaacctaccacatccaaca 27430492  T
Q  155 cactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatctg 219  Q
    || |||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27430493 cattatgtggttggaggaatttcaatagctcagctaggcagttgtaggcataacccttgtatctg 27430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 218
Target Start/End: Complemental strand, 27777307 - 27777095
Alignment:
Q  6 tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct 105  Q
    |||||| |||||| ||||||||| ||||  | ||| ||||||||| || ||||| ||| |||||||||| |  |||||||||||| || |||| ||||||    
T  27777307 tttttgtaatgcaacttgagagaattgtatatcagaaaacaaagcacgtttttcaacaccatccaaccaatctttatcaaaaccacatctgcgtacatct 27777208  T
Q  106 tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat 205  Q
    |||||||||||| |||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||| ||    
T  27777207 tgtaataactcatcaaactcagagcggcttgaacctaacacatccaacacactatggttttggaggaatttcaatagctcagcaagacagttgtaggaat 27777108  T
Q  206 aacccttgtatct 218  Q
    ||| |||||||||    
T  27777107 aactcttgtatct 27777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 30994099 - 30993891
Alignment:
Q  7 ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt 106  Q
    ||||||||||||| |||||||| |||| || ||||||| ||||| |||||||| |||   |||||||| |    ||  |||||| |||| | ||| ||||    
T  30994099 ttttgcaatgcattttgagagaattgtaaatcaggaaataaagcacgcttttcgacactgtccaaccaat----attgaaaccacatttccacacttctt 30994004  T
Q  107 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata 206  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  30994003 ctaataactcaacaaattcagagtggcttgaacctaacacatccaacacacaatgcgtttggaggaatttcaatagatcagctagacagttgtaggcata 30993904  T
Q  207 acccttgtatctg 219  Q
    |||||| ||||||    
T  30993903 acccttatatctg 30993891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 18078689 - 18078806
Alignment:
Q  102 atcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtag 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||    
T  18078689 atcttgtaataactcaacaaattcagaatggcttgaacctaacacatccaacacattatgcgtttggaggaatttcaatagctcagctaggcaattgtag 18078788  T
Q  202 gcataacccttgtatctg 219  Q
    ||||||||||||||||||    
T  18078789 gcataacccttgtatctg 18078806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26203983 - 26204197
Alignment:
Q  4 aatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacat 103  Q
    ||||| ||||| |||||||| || ||||||  | |||| |||||||| ||| |||| ||| |||||||||| | |||||||||||||||  || || |||    
T  26203983 aatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgtgcgcat 26204082  T
Q  104 cttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggc 203  Q
    ||||||||||||| | ||||||||| |||  ||| ||||| || ||||| ||| ||||||||| ||||||||||||||| ||||||||  | ||||||||    
T  26204083 cttgtaataactccagaaattcagagtggaatgagcctaatacttccaatacattatgggttttgaggaatttcaatagttcagctagtaaattgtaggc 26204182  T
Q  204 ataacccttgtatct 218  Q
    | |||||||||||||    
T  26204183 acaacccttgtatct 26204197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 218
Target Start/End: Original strand, 28508432 - 28508612
Alignment:
Q  38 caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga 137  Q
    ||||||||||||||||| | || ||| |||||||||| | |||||||||||||||  ||||| ||||||||| |||||| ||||||| ||| ||||  ||    
T  28508432 caggaaacaaagcgcgcctctcaacaccatccaaccaatccttatcaaaaccaaagctgcgcgcatcttgtattaactccacaaatttagagtggcacga 28508531  T
Q  138 acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatct 218  Q
     || || || ||||||| |||||||||||  |||||||||||||| ||||||||  | ||||||||| |||||||||||||    
T  28508532 ccccaatacttccaacatactatgggtttcaaggaatttcaatagttcagctagtaaattgtaggcacaacccttgtatct 28508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26109691 - 26109905
Alignment:
Q  4 aatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacat 103  Q
    ||||| ||||| |||||||| || ||||||  | |||| |||||||| ||| |||| ||| |||||||||| | |||||||||||||||  || || |||    
T  26109691 aatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgtgcgcat 26109790  T
Q  104 cttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggc 203  Q
    ||||||||||||| | ||||||||| |||  ||| |||||  | ||||| | | ||||||||| ||||||||||||||| ||||||||  | ||||||||    
T  26109791 cttgtaataactccataaattcagagtggtatgatcctaattcttccaatatattatgggttttgaggaatttcaatagttcagctagtaaattgtaggc 26109890  T
Q  204 ataacccttgtatct 218  Q
    | |||||||||||||    
T  26109891 acaacccttgtatct 26109905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 216
Target Start/End: Original strand, 26138609 - 26138787
Alignment:
Q  38 caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga 137  Q
    ||||||||||||| ||| |||| ||| |||||||||| | |||||||||||||||  | ||  |||||||||||||||| ||||||||||| |||  ||     
T  26138609 caggaaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagcttcgtgcatcttgtaataactccacaaattcagagtggaatgt 26138708  T
Q  138 acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat 216  Q
     || || || ||||| | ||||||||||| ||||||||||||||| | ||||||   |||||||||| |||||||||||    
T  26138709 gcccaatacttccaatatactatgggttttgaggaatttcaatagtttagctagtacgttgtaggcacaacccttgtat 26138787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 218
Target Start/End: Original strand, 26232069 - 26232249
Alignment:
Q  38 caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga 137  Q
    ||||| |||||| |||| |||| ||| |||||||||| | |||||||||||||||  | ||  ||||||||||||||||  |||||||||| |||  |||    
T  26232069 caggacacaaagtgcgcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactcctcaaattcagagtggaatga 26232168  T
Q  138 acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatct 218  Q
     || || || |||||||||||||| |||| ||||||||||| ||| |||||||   | ||||||||| |||||||||||||    
T  26232169 gcccaatacttccaacacactatgagttttgaggaatttcagtagttcagctaataaattgtaggcacaacccttgtatct 26232249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 28479269 - 28479429
Alignment:
Q  58 tccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacac 157  Q
    |||||| |||||||||| | |||||| ||||||||  ||||| |||||||||||||||| ||||||| ||| ||||  |  || || || ||||||||||    
T  28479269 tccacaccatccaaccaatccttatctaaaccaaagctgcgcgcatcttgtaataactccacaaatttagagtggcacggccccaatacttccaacacac 28479368  T
Q  158 tatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatct 218  Q
    |||||||||  |||||||||||||| || |||||  | ||||||||| |||||||||||||    
T  28479369 tatgggtttcaaggaatttcaatagttcggctagtaaattgtaggcacaacccttgtatct 28479429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 26126481 - 26126682
Alignment:
Q  17 catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc 116  Q
    ||||||||||||||||   | ||||| |||||| || | |||| ||| |||||||||| | |||||||||||||||  | ||  ||||||||||||||||    
T  26126481 catcttgagagacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc 26126580  T
Q  117 aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat 216  Q
      |||||||||| |||  ||| || || || ||||||||||| ||||||| ||| |||||||| || ||||||||  | ||||| ||| |||||||||||    
T  26126581 ctcaaattcagagtggaatgaccccaatacttccaacacactgtgggttttgagaaatttcaacagttcagctagtaaattgtaagcacaacccttgtat 26126680  T
Q  217 ct 218  Q
    ||    
T  26126681 ct 26126682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 26176532 - 26176733
Alignment:
Q  17 catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc 116  Q
    |||||||||| |||||   | ||||| |||||| || | |||| ||| |||||||||| | |||||||||||||||  | ||  ||||||||||||||||    
T  26176532 catcttgagaaacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc 26176631  T
Q  117 aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtat 216  Q
      |||||||||| |||  ||| || || || ||||||||||| ||||||| |||||||||||| || ||||||||  | ||||| ||| |||||||||||    
T  26176632 ctcaaattcagagtggaatgagcccaatacttccaacacactgtgggttttgaggaatttcaacagttcagctagtaaattgtaagcacaacccttgtat 26176731  T
Q  217 ct 218  Q
    ||    
T  26176732 ct 26176733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 27458261 - 27458401
Alignment:
Q  78 cttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttc 177  Q
    |||||||||| ||||  |||| |||||||||||||||| |||||||| |||  |||||||||| |||||||| ||||||||||||||||| || ||||      
T  27458261 cttatcaaaagcaaagctgcgtacatcttgtaataacttaacaaatttagagcggcttgaacccaacacatcaaacacactatgggtttgaagaaattgt 27458360  T
Q  178 aatagatcagctaggcagttgtaggcataacccttgtatct 218  Q
    || || ||||| || |||  ||| |||||||||||||||||    
T  27458361 aacagctcagcgagacagccgtaagcataacccttgtatct 27458401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 28137085 - 28136907
Alignment:
Q  4 aatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacat 103  Q
    ||||||||||  || |||||||| | ||||  | ||||||||| ||| ||| |||| |||  ||||||||| | ||||||||||||||| |||||| |||    
T  28137085 aatttttgcatggcgtcttgagatatttgtatatcaggaaacatagcccgcctttcgacactatccaaccaatccttatcaaaaccaaagttgcgcgcat 28136986  T
Q  104 cttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatag 182  Q
    || ||| ||  || ||||||||||| |||| ||| ||||| |||||||| |||||||| ||||  ||||||||||||||    
T  28136985 ctagtagtagatccacaaattcagagtggcatgagcctaatacatccaagacactatgagtttcaaggaatttcaatag 28136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 8549753 - 8549708
Alignment:
Q  66 atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaat 111  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||||    
T  8549753 atccaaccaatccttatcaaaaccacatttgcgcacatcttgtaat 8549708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27357012 - 27356921
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaa 92  Q
    |||| |||||||||||||||||||||||||| |  | | | ||||||||| ||  |||| |||  ||||||||| | |||||||||||||||    
T  27357012 aacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaa 27356921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 8021607 - 8021399
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||||||||| ||||||||||  |||  || | |    
T  8021607 aacaatttttgcaatgcatcttgagagacttgcgaaccatgaaacaaagcacgcttttcgatatcatccaaccattccttatcaaaaggaaaactgtgta 8021508  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||||    
T  8021507 catcttgtaataactcgataaattcagagaggcttgaacctaacacatccaacacactatgagtttgaaggaatttcaatagctcggctagacagttgta 8021408  T
Q  201 ggcataacc 209  Q
    |||||||||    
T  8021407 ggcataacc 8021399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22400926 - 22400709
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||| |||||||||||||||||||||||||| |  | | | ||||||||| ||  |||| |||  ||||||||| | |||||||||||||||  ||||||    
T  22400926 aacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgcgca 22400827  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
     ||  |||| || || ||| |||||||| || ||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||| ||  ||||    
T  22400826 aattgtgtagtagcttaacgaattcagagtgacttgaacctaacacatctagcacactatgggtttggaggaattgtaatagatcagctagacaagtgta 22400727  T
Q  201 ggcataacccttgtatct 218  Q
     ||||||| |||||||||    
T  22400726 tgcataacacttgtatct 22400709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22966103 - 22965886
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||| |||||||||||||||||||||||||| |  | | | ||||||||| ||  |||| |||  ||||||||| | |||||||||||||||  ||||||    
T  22966103 aacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgcgca 22966004  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgta 200  Q
     ||  |||| || || ||| |||||||| || |||||| |||||||||| | |||||||||||||||||||||||  ||||| |||||||| ||  ||||    
T  22966003 aattgtgtagtagcttaacgaattcagaatgacttgaagctaacacatctagcacactatgggtttggaggaattgtaatagctcagctagacaagtgta 22965904  T
Q  201 ggcataacccttgtatct 218  Q
     ||||||| |||||||||    
T  22965903 tgcataacacttgtatct 22965886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22792630 - 22792443
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||| |||||||||||||||||||||||||| |  | | | ||||||||| ||  |||| |||  ||||||||| | |||||||||||||||  | ||||    
T  22792630 aacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctacgca 22792531  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagc 188  Q
     ||  |||| || || ||  |||||||| || ||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||    
T  22792530 aattgtgtagtagcttaatgaattcagagtgacttgaacctaacacatccagcacactatgggtttggaggaattgtaatagctcagc 22792443  T

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Target: scaffold0922 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 2503 - 2291
Alignment:
Q  7 ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt 106  Q
    |||||||  |||| ||||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||  |||||||||  |||| | |||| |||||    
T  2503 ttttgcagcgcattttgagagacttgtaaaccaggaaacaaggcgagcttttcaacaccatccaaccattctttatcaaaaggaaatctacgcatatctt 2404  T
Q  107 gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata 206  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    |||  ||||||||||||||||||| |||||||| ||||||||||||||    
T  2403 gtaatagctcaacaaattcagaatggcttgaacctaacacatccaacaggtaatgcttttggaggaatttcaatagctcagctagacagttgtaggcata 2304  T
Q  207 acccttgtatctg 219  Q
    ||||||| |||||    
T  2303 acccttgaatctg 2291  T

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Target: scaffold1147 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1043 - 873
Alignment:
Q  1 aacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgca 100  Q
    |||||||||||||||| |||| ||||||||||| ||| ||||||||||| | | ||||| ||| |||| ||||  | ||| |||||| ||||| || |||    
T  1043 aacaatttttgcaatgtatctagagagacttgtaaactaggaaacaaagtgtgtttttcgacaccatctaaccgatccttgtcaaaagcaaatatgtgca 944  T
Q  101 catcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggagg 171  Q
    ||||||| | ||||||||| |||| ||| | |||||||||||||||||||||||||  |||||||||||||    
T  943 catcttggattaactcaaccaatttagagttgcttgaacctaacacatccaacacatcatgggtttggagg 873  T

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Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 8692444 - 8692596
Alignment:
Q  66 atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtt 165  Q
    ||||||||| | ||||||||||||||| |||||| ||||| ||| || ||| ||||||||||| |||| ||||||||| |||||||| |||||||| |||    
T  8692444 atccaaccaatccttatcaaaaccaaagttgcgcgcatctagtagtagctccacaaattcagagtggcatgaacctaatacatccaagacactatgagtt 8692543  T
Q  166 tggaggaatttcaatagatcagctaggcagttgtaggcataacccttgtatct 218  Q
    |  |||||||||||||| ||||| ||  ||||||||||| |||||||| ||||    
T  8692544 tcaaggaatttcaatagctcagccagtaagttgtaggcacaacccttgaatct 8692596  T

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