View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5077_low_14 (Length: 212)
Name: NF5077_low_14
Description: NF5077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5077_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13038123 - 13038166
Alignment:
| Q |
18 |
acctgacgtgggaataagcttgtaaattatggtcactcttataa |
61 |
Q |
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| T |
13038123 |
acctgacgtgggaataagcttgtaaattatggtcactctgataa |
13038166 |
T |
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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13108131 - 13108174
Alignment:
| Q |
18 |
acctgacgtgggaataagcttgtaaattatggtcactcttataa |
61 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
13108131 |
acctgacgtgggaataagcttgtaaattatggtcactctgataa |
13108174 |
T |
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