View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5078_high_5 (Length: 251)

Name: NF5078_high_5
Description: NF5078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5078_high_5
NF5078_high_5
[»] chr5 (24 HSPs)
chr5 (208-251)||(32872789-32872832)
chr5 (207-251)||(36562944-36562988)
chr5 (80-131)||(24486894-24486944)
chr5 (100-138)||(34379482-34379520)
chr5 (79-140)||(5007734-5007794)
chr5 (101-138)||(32912068-32912105)
chr5 (101-141)||(11954461-11954501)
chr5 (79-138)||(4434479-4434537)
chr5 (79-138)||(14206397-14206455)
chr5 (103-138)||(22649666-22649701)
chr5 (80-138)||(3640201-3640258)
chr5 (79-136)||(14923080-14923135)
chr5 (80-138)||(32732123-32732180)
chr5 (100-138)||(40829443-40829481)
chr5 (100-137)||(6940155-6940192)
chr5 (101-134)||(7076577-7076610)
chr5 (101-138)||(8675437-8675474)
chr5 (101-138)||(14532534-14532571)
chr5 (101-138)||(34124651-34124688)
chr5 (81-138)||(43153065-43153121)
chr5 (82-138)||(8442170-8442225)
chr5 (207-251)||(32284713-32284757)
chr5 (86-130)||(35567515-35567559)
chr5 (101-137)||(38363111-38363147)
[»] chr3 (34 HSPs)
chr3 (82-140)||(9753230-9753287)
chr3 (207-251)||(29525999-29526043)
chr3 (76-138)||(19148996-19149056)
chr3 (83-138)||(35377086-35377141)
chr3 (79-138)||(50745557-50745615)
chr3 (101-143)||(38671647-38671689)
chr3 (207-251)||(4494128-4494172)
chr3 (207-251)||(34307432-34307476)
chr3 (79-138)||(3281720-3281778)
chr3 (81-140)||(47683800-47683858)
chr3 (79-138)||(49361840-49361898)
chr3 (79-138)||(49761316-49761374)
chr3 (103-137)||(10464975-10465009)
chr3 (217-251)||(27168573-27168607)
chr3 (80-138)||(29846896-29846953)
chr3 (101-138)||(3953479-3953516)
chr3 (101-138)||(24095410-24095447)
chr3 (82-134)||(24256780-24256830)
chr3 (81-138)||(28700471-28700527)
chr3 (81-138)||(35368621-35368677)
chr3 (79-108)||(38470597-38470626)
chr3 (101-138)||(50314654-50314691)
chr3 (106-138)||(6178430-6178462)
chr3 (106-138)||(8846526-8846558)
chr3 (82-138)||(29057659-29057714)
chr3 (112-144)||(33007400-33007432)
chr3 (112-144)||(39540275-39540307)
chr3 (207-251)||(39713928-39713972)
chr3 (80-144)||(43169752-43169815)
chr3 (106-138)||(44677488-44677520)
chr3 (106-138)||(45711444-45711476)
chr3 (82-138)||(47484290-47484346)
chr3 (82-138)||(48893354-48893409)
chr3 (81-137)||(50146487-50146542)
[»] chr7 (32 HSPs)
chr7 (79-135)||(26749014-26749068)
chr7 (207-251)||(29723816-29723860)
chr7 (80-138)||(11352978-11353035)
chr7 (100-138)||(18111616-18111654)
chr7 (101-143)||(46880932-46880974)
chr7 (207-251)||(2008723-2008767)
chr7 (207-251)||(12007077-12007121)
chr7 (207-251)||(15325531-15325575)
chr7 (207-251)||(28249461-28249505)
chr7 (82-138)||(33465044-33465099)
chr7 (80-144)||(41985099-41985162)
chr7 (79-138)||(43942646-43942703)
chr7 (79-138)||(3937126-3937184)
chr7 (79-137)||(2323301-2323358)
chr7 (79-140)||(2469700-2469760)
chr7 (101-138)||(24532947-24532984)
chr7 (79-144)||(37351989-37352053)
chr7 (101-138)||(40353294-40353331)
chr7 (81-138)||(45420065-45420121)
chr7 (101-138)||(47145077-47145114)
chr7 (81-138)||(49142522-49142578)
chr7 (207-251)||(21103148-21103192)
chr7 (80-144)||(22330630-22330693)
chr7 (101-137)||(29723932-29723968)
chr7 (78-138)||(29923678-29923737)
chr7 (81-137)||(33224834-33224889)
chr7 (207-251)||(33845178-33845222)
chr7 (106-138)||(34108859-34108891)
chr7 (101-137)||(35452578-35452614)
chr7 (207-251)||(37352246-37352290)
chr7 (106-138)||(40854659-40854691)
chr7 (103-143)||(43807812-43807852)
[»] chr2 (26 HSPs)
chr2 (80-137)||(42607536-42607592)
chr2 (79-138)||(6049349-6049408)
chr2 (79-138)||(10711733-10711791)
chr2 (217-251)||(26480981-26481015)
chr2 (82-138)||(37737982-37738036)
chr2 (207-251)||(2427890-2427934)
chr2 (207-251)||(11965929-11965973)
chr2 (207-251)||(14877125-14877169)
chr2 (207-251)||(44239172-44239216)
chr2 (83-135)||(13265975-13266029)
chr2 (78-109)||(17569749-17569780)
chr2 (100-143)||(19916684-19916727)
chr2 (104-143)||(37003643-37003682)
chr2 (79-137)||(6646832-6646889)
chr2 (100-138)||(21738620-21738658)
chr2 (100-138)||(40210072-40210110)
chr2 (81-138)||(22296134-22296190)
chr2 (81-138)||(22353180-22353236)
chr2 (106-143)||(37731199-37731236)
chr2 (101-137)||(433880-433916)
chr2 (79-138)||(4263869-4263926)
chr2 (207-251)||(31578570-31578614)
chr2 (106-138)||(35589391-35589423)
chr2 (207-251)||(37316706-37316750)
chr2 (207-251)||(37731091-37731135)
chr2 (106-138)||(41195618-41195650)
[»] chr8 (32 HSPs)
chr8 (81-137)||(7010684-7010739)
chr8 (80-138)||(9963694-9963752)
chr8 (208-251)||(33451456-33451499)
chr8 (79-144)||(40413348-40413412)
chr8 (207-251)||(1068742-1068786)
chr8 (82-138)||(6243045-6243100)
chr8 (79-138)||(14710898-14710956)
chr8 (83-138)||(39211054-39211108)
chr8 (84-137)||(17823469-17823520)
chr8 (100-138)||(28756564-28756602)
chr8 (80-138)||(30439510-30439567)
chr8 (80-138)||(37392133-37392190)
chr8 (217-251)||(42652739-42652773)
chr8 (101-134)||(8645195-8645228)
chr8 (106-143)||(34435736-34435773)
chr8 (77-138)||(38939194-38939254)
chr8 (101-138)||(41520998-41521035)
chr8 (106-138)||(9549203-9549235)
chr8 (77-109)||(10692434-10692466)
chr8 (207-251)||(15716867-15716911)
chr8 (106-138)||(16327156-16327188)
chr8 (106-138)||(27776187-27776219)
chr8 (207-251)||(33107758-33107802)
chr8 (106-138)||(33589234-33589266)
chr8 (106-138)||(34018843-34018875)
chr8 (207-251)||(34435628-34435672)
chr8 (223-251)||(36874004-36874032)
chr8 (79-143)||(36874110-36874173)
chr8 (82-138)||(37471654-37471709)
chr8 (82-138)||(38174238-38174294)
chr8 (107-143)||(44090922-44090958)
chr8 (207-251)||(44091022-44091066)
[»] chr4 (32 HSPs)
chr4 (81-134)||(25318073-25318128)
chr4 (207-251)||(39158241-39158285)
chr4 (207-251)||(51255882-51255926)
chr4 (101-138)||(40348823-40348860)
chr4 (82-138)||(48335564-48335621)
chr4 (83-143)||(5386385-5386444)
chr4 (207-251)||(18316073-18316117)
chr4 (207-251)||(38519929-38519973)
chr4 (83-138)||(9095949-9096003)
chr4 (72-138)||(39605969-39606033)
chr4 (79-138)||(43769720-43769778)
chr4 (217-251)||(21014143-21014177)
chr4 (80-138)||(28657445-28657502)
chr4 (80-138)||(37727059-37727117)
chr4 (101-143)||(39158135-39158177)
chr4 (100-138)||(49585023-49585061)
chr4 (106-140)||(56557768-56557802)
chr4 (101-138)||(149489-149526)
chr4 (82-138)||(1580288-1580342)
chr4 (80-136)||(4106052-4106106)
chr4 (80-137)||(4949516-4949572)
chr4 (101-138)||(7627878-7627915)
chr4 (101-138)||(26206981-26207018)
chr4 (81-138)||(31657657-31657713)
chr4 (103-140)||(41262347-41262384)
chr4 (82-138)||(50608629-50608683)
chr4 (82-138)||(24310526-24310581)
chr4 (207-251)||(29227134-29227178)
chr4 (106-138)||(37297083-37297115)
chr4 (82-138)||(37731926-37731981)
chr4 (103-143)||(50050669-50050709)
chr4 (207-251)||(54000834-54000878)
[»] chr1 (36 HSPs)
chr1 (207-251)||(7918953-7918997)
chr1 (82-138)||(47398456-47398511)
chr1 (217-251)||(4213218-4213252)
chr1 (79-137)||(50797788-50797845)
chr1 (101-137)||(8846003-8846039)
chr1 (82-138)||(18336158-18336213)
chr1 (207-251)||(47642498-47642542)
chr1 (207-251)||(48983559-48983603)
chr1 (82-138)||(51718631-51718687)
chr1 (79-138)||(8200084-8200142)
chr1 (79-138)||(11121489-11121547)
chr1 (79-138)||(38303692-38303751)
chr1 (79-138)||(40596059-40596117)
chr1 (79-138)||(48325783-48325841)
chr1 (79-137)||(611641-611698)
chr1 (101-143)||(4213102-4213144)
chr1 (81-143)||(4857921-4857982)
chr1 (80-138)||(33358163-33358220)
chr1 (82-144)||(37690429-37690490)
chr1 (77-134)||(48103398-48103453)
chr1 (100-138)||(52437523-52437561)
chr1 (101-138)||(5771752-5771789)
chr1 (101-138)||(40328745-40328782)
chr1 (100-137)||(46281465-46281502)
chr1 (81-138)||(48220148-48220204)
chr1 (101-134)||(50824771-50824804)
chr1 (82-138)||(16836120-16836175)
chr1 (207-251)||(27742745-27742789)
chr1 (106-138)||(29586028-29586060)
chr1 (82-138)||(30196724-30196780)
chr1 (112-144)||(37515956-37515988)
chr1 (207-251)||(38878792-38878836)
chr1 (207-251)||(40439731-40439775)
chr1 (82-138)||(41507199-41507254)
chr1 (207-251)||(42468728-42468772)
chr1 (106-138)||(47215733-47215765)
[»] scaffold0204 (1 HSPs)
scaffold0204 (82-138)||(23086-23143)
[»] scaffold0276 (1 HSPs)
scaffold0276 (80-138)||(1656-1711)
[»] chr6 (14 HSPs)
chr6 (103-138)||(5570338-5570373)
chr6 (217-251)||(1287059-1287093)
chr6 (217-251)||(17182244-17182278)
chr6 (106-140)||(34442065-34442099)
chr6 (82-138)||(2163702-2163757)
chr6 (82-138)||(2175335-2175390)
chr6 (106-138)||(2777320-2777352)
chr6 (106-138)||(11547533-11547565)
chr6 (101-141)||(17182129-17182169)
chr6 (207-251)||(18064981-18065025)
chr6 (102-138)||(28630129-28630165)
chr6 (82-138)||(32135436-32135491)
chr6 (82-138)||(32644623-32644678)
chr6 (207-251)||(33712456-33712500)
[»] scaffold0054 (1 HSPs)
scaffold0054 (80-138)||(31605-31662)
[»] scaffold0034 (1 HSPs)
scaffold0034 (213-251)||(101792-101830)
[»] scaffold0618 (2 HSPs)
scaffold0618 (207-251)||(8844-8888)
scaffold0618 (107-143)||(8952-8988)
[»] scaffold0286 (1 HSPs)
scaffold0286 (82-138)||(18652-18707)
[»] scaffold0201 (1 HSPs)
scaffold0201 (207-251)||(8608-8652)
[»] scaffold0184 (1 HSPs)
scaffold0184 (207-251)||(13448-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (207-251)||(59352-59396)


Alignment Details
Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 32872832 - 32872789
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  32872832 ttgtccaacaagttgtcacaagaaagggttgttcaaataacatt 32872789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 36562988 - 36562944
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  36562988 gttgtccaacaagttgtcccaacaaagggttgttcaaataacatt 36562944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 24486894 - 24486944
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatac 131  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  24486894 aagagaaatgatatttgaacaataatttttg-tacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 34379482 - 34379520
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  34379482 aataatttttgtgacaattttctctctcatactcacatt 34379520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 5007794 - 5007734
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||| || |||||    
T  5007794 aaagagaaatgatatttgaacaacaa-ttttgtgacaattttctctttcatacacatattgt 5007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 32912068 - 32912105
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32912068 ataatttttgtgacaattttctctctcatactcacatt 32912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 11954461 - 11954501
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgtt 141  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  11954461 ataatttttgtgacaactttctctctcatactcacattgtt 11954501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 4434479 - 4434537
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||||  ||||||||| |||||||||||||||||    
T  4434479 aaagagaaatgatatttgtacaaccatttttt-gacaattttttctctcatactcacatt 4434537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 14206397 - 14206455
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  14206397 aaagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 14206455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 22649701 - 22649666
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||| |||||||||||||||||||||||||||    
T  22649701 aatttttgtgacaattttctctctcatactcacatt 22649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3640258 - 3640201
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3640258 aagagaaatgatatttgaacatctatttt-gagacaactttctctctcatactcacatt 3640201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 14923080 - 14923135
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 136  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||    
T  14923080 aaagagaaatgatatttgaacaaccattttt--tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 32732180 - 32732123
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||| ||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  32732180 aagagaaattatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 32732123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 40829443 - 40829481
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  40829443 aataatttttgtgacaattttttctctcatactcacatt 40829481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 6940192 - 6940155
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  6940192 aataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 7076610 - 7076577
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  7076610 ataatttttgtgacaattttctctctcatactca 7076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 8675474 - 8675437
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  8675474 ataacttttgcaacaattttctctctcatactcacatt 8675437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 14532534 - 14532571
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  14532534 ataatttttgtgacaactttctctctcatactcacatt 14532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 34124651 - 34124688
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  34124651 ataatttttgtgataattttctctctcatactcacatt 34124688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 43153121 - 43153065
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| |||| ||||||||  |||| ||||||||||||| |||||||    
T  43153121 agagaaatgatatttgtacaacaatttttg-tacaactttctctctcatattcacatt 43153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 8442170 - 8442225
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| |||||||  |||| ||||||||||||| |||||||    
T  8442170 gagaaatgatatttgtacaattatttttg-tacaactttctctctcatattcacatt 8442225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 32284757 - 32284713
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||||    
T  32284757 gttgtccaacaagttgtctcaacaaaaggttgtttaaataacatt 32284713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 35567515 - 35567559
Alignment:
Q  86 aatgatatttgaacaataatttttgcgacaattttctctctcata 130  Q
    |||||||||| |||||||||||||| || || |||||||||||||    
T  35567515 aatgatatttaaacaataatttttgtgataactttctctctcata 35567559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 38363111 - 38363147
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||| || |||||||||||||||||||||||    
T  38363111 ataatttttgtgataattttctctctcatactcacat 38363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 9753230 - 9753287
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  9753230 gagaaatgatatttgaacaatcatttt-gtgacaattttatctctcatactcacattgt 9753287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 29525999 - 29526043
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  29525999 gttgtccaacaagttgtcacaataaatggttgtacaaataacatt 29526043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 19148996 - 19149056
Alignment:
Q  76 atgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||||||| ||||||   | || |||||||||||||||||||||    
T  19148996 atgaaagagaaatgatatttgaacaatcattttt--tataactttctctctcatactcacatt 19149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 35377141 - 35377086
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| || ||||| ||||| ||||||||||| |||||||||    
T  35377141 agaaatgatatttgaacaacaacttttgtgacaactttctctctcacactcacatt 35377086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 50745557 - 50745615
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  50745557 aaagagaaatgatatttgtacaatcatttttg-tacaactttctctctcatactcacatt 50745615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 38671647 - 38671689
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  38671647 ataatttttgtgacaattttctctctcgtactcacattgttct 38671689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 4494172 - 4494128
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  4494172 gttgtccaacaagttgtcataagaaatggttgttcaaataacatt 4494128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 34307476 - 34307432
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  34307476 gttgtccaataagttgtcacaagaaaggattgttcaaataacatt 34307432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 3281778 - 3281720
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||| | | ||||| ||||| ||||||||| |||||||||||    
T  3281778 aaagagaaatgatatttgaacattta-ttttgtgacaactttctctcttatactcacatt 3281720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 47683800 - 47683858
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    |||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacattgt 47683858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 49361898 - 49361840
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||| |||||||  |||| ||| |||||||||||||||||    
T  49361898 aaagagaaatgatatttgtacaatcatttttg-tacaactttttctctcatactcacatt 49361840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 49761316 - 49761374
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  49761316 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 49761374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 10464975 - 10465009
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||| ||||||||||||||||||||||||||    
T  10464975 aatttttgtgacaattttctctctcatactcacat 10465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 27168607 - 27168573
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||||||||||||||||    
T  27168607 aagttgtcataataaagggttgttcaaataacatt 27168573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 29846953 - 29846896
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  29846953 aagagaaatgatatttgtacaaccatttttgt-acaactttctctctcatactcacatt 29846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 3953516 - 3953479
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  3953516 ataatttttgtgacaactttctctctcatactcacatt 3953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 24095447 - 24095410
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  24095447 ataatttttgtgacaactttctctctcatactcacatt 24095410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 24256830 - 24256780
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 134  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||| |||||||||    
T  24256830 gagaaatgatatttgaacaatcattttt--gacaaatttctctatcatactca 24256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 28700471 - 28700527
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  ||||||  ||||| ||| |||||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttt-tgacaactttatctctcatactcacatt 28700527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 35368621 - 35368677
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgt-acaactttctctctcatactcacatt 35368677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 38470626 - 38470597
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttt 108  Q
    ||||||||||||||||||||||||||||||    
T  38470626 aaagagaaatgatatttgaacaataatttt 38470597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 50314654 - 50314691
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  50314654 ataactttttcgacaattttctctctcatactcacatt 50314691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 6178462 - 6178430
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  6178462 ttttgtgacaattttctctctcatactcacatt 6178430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 8846526 - 8846558
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  8846526 ttttgtgacaattttctctctcatactcacatt 8846558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 29057659 - 29057714
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgt-acaactttctctctcatactcacatt 29057714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 33007400 - 33007432
Alignment:
Q  112 gacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||||||||||||| |||||    
T  33007400 gacaattttctctctcatactcacattattctc 33007432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 39540275 - 39540307
Alignment:
Q  112 gacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||||||||||||| |||||    
T  39540275 gacaattttctctctcatactcacattattctc 39540307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 39713972 - 39713928
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| || |||||| ||| ||||||||||||||||||    
T  39713972 gttgtccaacaaattatcacaaaaaatggttgttcaaataacatt 39713928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 43169815 - 43169752
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||| ||||  ||||| | ||||| ||| ||||||||||||||||| |||||    
T  43169815 aagagaaatgatatttgtacaaccatttt-gtgacaactttttctctcatactcacattattctc 43169752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 44677520 - 44677488
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  44677520 ttttgcaacaattttctctctcatactcacatt 44677488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 45711476 - 45711444
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  45711476 ttttgtgacaattttctctctcatactcacatt 45711444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 47484290 - 47484346
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  ||||||   |||||||| |||||||||||||||||    
T  47484290 gagaaatgatatttgtacaaccattttttgtacaattttttctctcatactcacatt 47484346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 48893354 - 48893409
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||| |||| | ||||||  ||||||||| |||||||||||||||||    
T  48893354 gagaaatgatatttaaacattcatttttt-gacaattttttctctcatactcacatt 48893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 50146487 - 50146542
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||| | ||| ||||| | ||||||||||||||||||||| ||||    
T  50146487 agagaaatgatatttgtataatcatttt-gtgacaattttctctctcatacttacat 50146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 26749014 - 26749068
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcac 135  Q
    ||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||    
T  26749014 aaagagaaatgatatttgaacaacaattttt--gacaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 29723860 - 29723816
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  29723860 gttgtccaacaagttgtcacaataaatggttgtacaaataacatt 29723816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 11353035 - 11352978
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||||    
T  11353035 aagagaaatgatatttgaacatcaatttt-gtgacaactttctctctcatactcacatt 11352978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 18111654 - 18111616
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  18111654 aataatttttgtgacaattttctctctcatactcacatt 18111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 46880932 - 46880974
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  46880932 ataatttttgcgataattttctctctcatactcatattgttct 46880974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2008767 - 2008723
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  2008767 gttgtccaacaagttgtcacataaaatggttgttcaaataacatt 2008723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 12007121 - 12007077
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||    
T  12007121 gttgtccaacaagttgtcacaataaatagttgtacaaataacatt 12007077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 15325575 - 15325531
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  15325575 gttgtccaacaagttgtcacataaaaaggttgttcaaataacatt 15325531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 28249505 - 28249461
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||    
T  28249505 gttgtccaaaaagttgtcacaagaaatggttgttcaaataacatt 28249461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 33465099 - 33465044
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  |||||||  ||||||||||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgt-acaattttctctctcatactcacatt 33465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 41985162 - 41985099
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||| ||||| | ||| | ||||| ||||||||||||||||||||| |||||    
T  41985162 aagagaaatgatatttgtacaatcaattt-gtgacaactttctctctcatactcacattattctc 41985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 43942646 - 43942703
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  43942646 aaagagaaatgatatttgaacaactattttt--tacaactttctctctcatactcacatt 43942703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 3937184 - 3937126
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3937184 aaagagaaatgatatttgaacatctatttt-gtgacaactttctctctcatactcacatt 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 2323301 - 2323358
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||| |||| || ||||  ||||| ||||||||||||||||||||    
T  2323301 aaagagaaatgatatttgtacaacaa-ttttatgacaactttctctctcatactcacat 2323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 2469700 - 2469760
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    |||||||||||||||||| ||||  | ||| | ||||| |||||||||||||||||||||||    
T  2469700 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattgt 2469760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 24532984 - 24532947
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  24532984 ataatttttgtgacaattttttctctcatactcacatt 24532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 37352053 - 37351989
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    |||||||||||||||||| ||||  | ||| | ||||| ||||||||||||||||||||| |||||    
T  37352053 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattattctc 37351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 40353294 - 40353331
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  40353294 ataatttttgcaacaactttctctctcatactcacatt 40353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 45420121 - 45420065
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  ||||||  ||||| ||||||||||||| |||||||    
T  45420121 agagaaatgatatttgaacaactattttt-tgacaactttctctctcatattcacatt 45420065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 47145114 - 47145077
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  47145114 ataatttttgtgacaattttctctctcacactcacatt 47145077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 49142578 - 49142522
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  | ||||||||||||||||||||||||    
T  49142578 agagaaatgatatttgtacaaccatttttgtaa-aattttctctctcatactcacatt 49142522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 21103148 - 21103192
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||| |||||| ||| ||||||||||||| ||||    
T  21103148 gttgtccaacaagttatcacaagaaatggttgttcaaatatcatt 21103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 22330693 - 22330630
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||| ||||  | ||| | ||||| ||||||||||||||||||||| |||||    
T  22330693 aagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattattctc 22330630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 29723968 - 29723932
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  29723968 ataatttttgtgacaactttctctctcatactcacat 29723932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 29923678 - 29923737
Alignment:
Q  78 gaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| |||||| ||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  29923678 gaaagataaatgacatttgtacaatcatttttgt-acaactttctctctcatactcacatt 29923737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 33224834 - 33224889
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||||   ||||| | ||||| ||||||||||||||||||||    
T  33224834 agagaaatgatatttgaacatctatttt-gtgacaactttctctctcatactcacat 33224889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 33845178 - 33845222
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||    
T  33845178 gttgtccaacaaattgtcacatgaaaaggttgttcaaataacatt 33845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 34108891 - 34108859
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  34108891 ttttgtgacaattttctctctcatactcacatt 34108859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 35452614 - 35452578
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  35452614 ataatttttgtgacaactttctctctcatactcacat 35452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 37352246 - 37352290
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||||    
T  37352246 gttgtccaacaagttggtacaagaaatggttgttcaaataacatt 37352290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 40854691 - 40854659
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  40854691 ttttgtgacaattttctctctcatactcacatt 40854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 43807852 - 43807812
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||  ||||||||| ||||||||||||||||||||||    
T  43807852 aatttttatgacaattttttctctcatactcacattgttct 43807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 42607592 - 42607536
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||    
T  42607592 aagagaaatgatatttgtacaattatttt-gtgacaattttctctctcatactcacat 42607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 6049408 - 6049349
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||||||||    
T  6049408 aaagagaaatgatatttgatcaaccatttttgtgataactttctctctcatactcacatt 6049349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 10711733 - 10711791
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | |||||||||||||||||||||||||||    
T  10711733 aaagagaaatgatatttgaacatctatttt-gtgacaattttctctctcatactcacatt 10711791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 26481015 - 26480981
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||||||||||||    
T  26481015 aagttgtcacaataaagggttgttcaaataacatt 26480981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 37738036 - 37737982
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||  |||||  |||||| |||||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaaccatttt--cgacaactttctctctcatactcacatt 37737982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 2427934 - 2427890
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  2427934 gttgtccaacaaattgtcacaaaaaatggttgttcaaataacatt 2427890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 11965929 - 11965973
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  11965929 gttgtccaacaagttgtcacataaaaaggttgttcaaataacatt 11965973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 14877125 - 14877169
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  14877125 gttgtctaacaagttgtcacaagaaatggttgttcaaataacatt 14877169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 44239172 - 44239216
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||    
T  44239172 gttgtccaaaaaattgtcacaataaatggttgttcaaataacatt 44239216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 13265975 - 13266029
Alignment:
Q  83 agaaatgatatttgaacaata--atttttgcgacaattttctctctcatactcac 135  Q
    |||||||||||||| |||| |  |||||||| |||||||||||||||||||||||    
T  13265975 agaaatgatatttgtacaacacaatttttgcaacaattttctctctcatactcac 13266029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 17569780 - 17569749
Alignment:
Q  78 gaaagagaaatgatatttgaacaataattttt 109  Q
    ||||||||||||||||||||||||||||||||    
T  17569780 gaaagagaaatgatatttgaacaataattttt 17569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 19916684 - 19916727
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  19916684 aataatttttgtgacaactttctctctcatacacacattgttct 19916727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 37003643 - 37003682
Alignment:
Q  104 atttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  37003643 atttttgtgacaactttctctctcatactcacattgttct 37003682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 6646832 - 6646889
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||||||   ||||| | ||||| ||||||||||||||||||||    
T  6646832 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacat 6646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 21738658 - 21738620
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  21738658 aataatttttgtgataattttctctctcatactcacatt 21738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 40210110 - 40210072
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  40210110 aataatttttgtgacaactttctctctcatactcacatt 40210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22296190 - 22296134
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  |||||||||||||| |||||||||||    
T  22296190 agagaaatgatatttgtacaaccatttttgt-acaattttctctctgatactcacatt 22296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22353236 - 22353180
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||| ||||| | ||||| ||||| |||||||||||||||    
T  22353236 agagaaatgatatttgtacaatcatttt-gtgacaactttctttctcatactcacatt 22353180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 37731236 - 37731199
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  37731236 ttttgtgacaattttctctctcatacacacattgttct 37731199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 433880 - 433916
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  433880 ataatttttgcaacaactttctctctcatactcacat 433916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 4263926 - 4263869
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| |||| | |||||  ||||| ||||||| |||||||||||||    
T  4263926 aaagagaaatgatatttgtacaacatttttt--gacaactttctctttcatactcacatt 4263869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 31578570 - 31578614
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||    
T  31578570 gttgtccaacaagttgtcacaagaaatgattgttcaaatatcatt 31578614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 35589423 - 35589391
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  35589423 ttttgcaacaattttctctctcatactcacatt 35589391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 37316750 - 37316706
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||||    
T  37316750 gttgtccaacaagttgtcatagaaaaaggttgttcaaataacatt 37316706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 37731135 - 37731091
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||    
T  37731135 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacatt 37731091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 41195618 - 41195650
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  41195618 ttttgtgacaattttctctctcatactcacatt 41195650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 7010684 - 7010739
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||    
T  7010684 agagaaatgatatttgtacaatcatttttt-gacaattttctctctcatactcacat 7010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 9963694 - 9963752
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctc-tcatactcacatt 138  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||    
T  9963694 aagagaaatgatatttgtacaataattttt-tgacaattttctctcatcatactcacatt 9963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 33451499 - 33451456
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  33451499 ttgtctaacaagttgtcacaagaaagggttgttcaaataacatt 33451456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 40413412 - 40413348
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    |||||||||||||||||| ||||| ||||| | ||||| |||||||||||||||||| || |||||    
T  40413412 aaagagaaatgatatttgtacaattatttt-gtgacaactttctctctcatactcacgttattctc 40413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 1068742 - 1068786
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  1068742 gttgtccaacaagttgtcacataaaaaggttgttcaaataacatt 1068786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 6243045 - 6243100
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 6243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 14710956 - 14710898
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||    
T  14710956 aaagataaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacatt 14710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 39211054 - 39211108
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||  ||||||  ||||| |||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacatt 39211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 17823469 - 17823520
Alignment:
Q  84 gaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||  ||||||  ||||||||| ||||||||||||||||    
T  17823469 gaaatgatatttgaacaa--atttttatgacaattttttctctcatactcacat 17823520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 28756564 - 28756602
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  28756564 aataatttttgtgacaattttatctctcatactcacatt 28756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 30439567 - 30439510
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  30439567 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 30439510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 37392190 - 37392133
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 37392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 42652739 - 42652773
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||| |||||||||||||||||    
T  42652739 aagttgtcacaataaagagttgttcaaataacatt 42652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 8645195 - 8645228
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  8645195 ataatttttgggacaattttctctctcatactca 8645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 34435773 - 34435736
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  34435773 ttttgtgacaattttctctctcatacacacattgttct 34435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 38939254 - 38939194
Alignment:
Q  77 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||  ||||  |||||||  |||| |||||||||||||||||||||    
T  38939254 tgaaagagaaatgatatttctacaactatttttgt-acaactttctctctcatactcacatt 38939194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 41520998 - 41521035
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  41520998 ataacttttgcaacaattttctctctcatactcacatt 41521035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 9549235 - 9549203
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  9549235 ttttgtgacaattttctctctcatactcacatt 9549203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 10692434 - 10692466
Alignment:
Q  77 tgaaagagaaatgatatttgaacaataattttt 109  Q
    |||||||||||||||||||||||||| ||||||    
T  10692434 tgaaagagaaatgatatttgaacaatcattttt 10692466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 15716911 - 15716867
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  |||  |||||||||||||||||    
T  15716911 gttgtccaacaagttgtcacataaaaaagttgttcaaataacatt 15716867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 16327188 - 16327156
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||||||    
T  16327188 ttttgcgacaactttctctctcatactcacatt 16327156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 27776187 - 27776219
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| |||||||||||||    
T  27776187 ttttgcgacaattttctctttcatactcacatt 27776219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 33107802 - 33107758
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||    
T  33107802 gttgtccaacaaattgtcacataaaaaggttgttcaaataacatt 33107758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 33589266 - 33589234
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  33589266 ttttgcaacaattttctctctcatactcacatt 33589234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 34018843 - 34018875
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  34018843 ttttgcaacaattttctctctcatactcacatt 34018875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 34435672 - 34435628
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||    
T  34435672 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacatt 34435628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 36874032 - 36874004
Alignment:
Q  223 tcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||||||    
T  36874032 tcacaataaagggttgttcaaataacatt 36874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 36874173 - 36874110
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| |  |||  ||||||||||||    
T  36874173 aaagagaaatgatatttgaacaacaattttt-tgacaattttctttaacatgttcacattgttct 36874110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 37471654 - 37471709
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttg-tacaactttctctctcgtactcacatt 37471709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 38174294 - 38174238
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  || |||  ||||| |||||||||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcacatt 38174238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 44090922 - 44090958
Alignment:
Q  107 tttgcgacaattttctctctcatactcacattgttct 143  Q
    |||| |||||||||||||||||||| |||||||||||    
T  44090922 tttgtgacaattttctctctcatacacacattgttct 44090958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 44091022 - 44091066
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||    
T  44091022 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacatt 44091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 25318128 - 25318073
Alignment:
Q  81 agagaaatgatatttgaaca--ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||||||||||| |  |||| |||||||||||||||||||||||||||||    
T  25318128 agagaaatgatatttgaatatgataacttttgcgacaattttctctctcatactca 25318073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 39158241 - 39158285
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  39158241 gttgtccaataagttgtcacaataaatggttgttcaaataacatt 39158285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 51255882 - 51255926
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  51255882 gttgtccaacaagttgtcacaataaatggttgtacaaataacatt 51255926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 40348823 - 40348860
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40348823 ataatttttgtgacaattttctctctcatactcacatt 40348860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 48335564 - 48335621
Alignment:
Q  82 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  48335564 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 48335621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 5386385 - 5386444
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||| ||||    
T  5386385 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacattattct 5386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 18316073 - 18316117
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  18316073 gttgtccaacaagttgtcataagaaatggttgttcaaataacatt 18316117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 38519929 - 38519973
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||| |||| | |||||||||||    
T  38519929 gttgtccaacaagttgtcacaataaatggttatacaaataacatt 38519973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 9095949 - 9096003
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||| |||||| ||||| |||||||  ||||||||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgt-acaattttctctctcatactcacatt 9096003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 39605969 - 39606033
Alignment:
Q  72 aataatgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| | ||||||||||||| |||||||  |||||||  |||| |||||||||||||||||||||    
T  39605969 aataataatagagaaatgatatatgaacaaccatttttg--acaactttctctctcatactcacatt 39606033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 43769720 - 43769778
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  43769720 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 43769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 21014143 - 21014177
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||| ||||||||||||||||||    
T  21014143 aagttgtcacaataaaaggttgttcaaataacatt 21014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 28657502 - 28657445
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  28657502 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 28657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 37727117 - 37727059
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||| | ||||  || ||||| ||||||||||||||||||    
T  37727117 aagagaaatgatatttgtacaatcaattttttgataatttgctctctcatactcacatt 37727059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 39158135 - 39158177
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  39158135 ataatttttgtgacaactttctctctcatactcacattattct 39158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 49585023 - 49585061
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  49585023 aataatttttgggacaactttctctctcatactcacatt 49585061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 56557768 - 56557802
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||| |||||||||||||||||||||||||||||    
T  56557768 ttttgtgacaattttctctctcatactcacattgt 56557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 149526 - 149489
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  149526 ataatttttgtgacaactttctctctcatactcacatt 149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 1580342 - 1580288
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| |||| | ||| ||  ||||||||||||||||||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtg--acaattttctctctcatactcacatt 1580288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 4106052 - 4106106
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 136  Q
    ||||||||||||||||| |||||  |||||   ||||||||||||||||||||||||    
T  4106052 aagagaaatgatatttgtacaattttttttt--acaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 4949516 - 4949572
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||||| | ||||  | ||||| ||||||||||||||||||||    
T  4949516 aagagaaatgatatttgaacattcatttg-gtgacaactttctctctcatactcacat 4949572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7627878 - 7627915
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7627878 ataatttttgtgataattttctctctcatactcacatt 7627915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 26207018 - 26206981
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  26207018 ataatttttgcaacaattttctctctcatattcacatt 26206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 31657657 - 31657713
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  31657657 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 31657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 41262384 - 41262347
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  41262384 aatttttgcaacaattttctctctcttactcacattgt 41262347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 50608683 - 50608629
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||| ||||||||||||| ||||||  ||||| ||||||| |||||||||||||    
T  50608683 gagaaattatatttgaacaattattttt--gacaactttctctttcatactcacatt 50608629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 24310581 - 24310526
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgt-acaactttctctctcatactcacatt 24310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 29227178 - 29227134
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||    
T  29227178 gttgtccaacaaattgtcacataaaaaggttgttcaaataacatt 29227134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 37297083 - 37297115
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  37297083 ttttgtgacaattttctctctcatactcacatt 37297115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 37731926 - 37731981
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| ||||| |  |||| |||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggt-acaactttctctctcatactcacatt 37731981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 50050669 - 50050709
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||| ||||||||||||||||||| | ||||||||||    
T  50050669 aatttttgtgacaattttctctctcatatttacattgttct 50050709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 54000834 - 54000878
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| | ||||||||||||||  |||||||||||||||||    
T  54000834 gttgtccaaaaggttgtcacaataaatagttgttcaaataacatt 54000878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 7918997 - 7918953
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  7918997 gttgtctaacaagttgtcacaagaaagggttgttcaaataacatt 7918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 47398511 - 47398456
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcatttttt-gacaattttctctctcatactcacatt 47398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 4213218 - 4213252
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||||||||||||    
T  4213218 aagttgtcacaataaagggttgttcaaataacatt 4213252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 50797788 - 50797845
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||| ||||| ||||| | ||||| ||||||||||||||||||||    
T  50797788 aaagagaaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacat 50797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 8846003 - 8846039
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8846003 ataatttttgtgacaattttctctctcatactcacat 8846039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 18336158 - 18336213
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| | ||||| | ||||| |||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcatttt-gtgacaactttctctctcatactcacatt 18336213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 47642542 - 47642498
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  47642542 gttgtccaacaagttgtcccaaaaaatggttgttcaaataacatt 47642498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 48983603 - 48983559
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||||||| |||||| | |||||||||    
T  48983603 gttgtccaacaagttgtcacaataaatggttgtaccaataacatt 48983559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 51718687 - 51718631
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcacatt 51718631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 8200084 - 8200142
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  8200084 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 8200142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 11121489 - 11121547
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| |||| || |||||  |||| |||||||||||||||||||||    
T  11121489 aaagagaaatgatatttgtacaacaacttttgt-acaactttctctctcatactcacatt 11121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 38303751 - 38303692
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||  || |||| | |||| |||||||||||||||| ||||    
T  38303751 aaagagaaatgatatttgaacatcaacttttacaacaactttctctctcatactcgcatt 38303692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 40596117 - 40596059
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacatt 40596059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 48325841 - 48325783
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||| | ||||||||||| |||||||||||||||    
T  48325841 aaagagaaatgatatttgtacaaccatttt-gtgacaattttctatctcatactcacatt 48325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 611698 - 611641
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||||||||| | ||||| || |||||||||||||| | ||||||    
T  611698 aaagagaaatgatatttgaacaatca-ttttgggataattttctctctcaaattcacat 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 4213102 - 4213144
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||    
T  4213102 ataacttttgtgacaactttctctctcatactcacattgttct 4213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 4857921 - 4857982
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||||||||||||||| | ||||  ||||| |||||||||||| | |||||||||||    
T  4857921 agagaaatgatatttgaacaatcactttt-tgacaactttctctctcatgcacacattgttct 4857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 33358220 - 33358163
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  33358220 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 33358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 37690429 - 37690490
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||| ||||| | |||   ||||||||||||||||||||||||||| |||||    
T  37690429 gagaaatgatatttgtacaatcactttat-gacaattttctctctcatactcacattattctc 37690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 48103453 - 48103398
Alignment:
Q  77 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 134  Q
    ||||||||||||||||||||||||  | | |||| ||||| |||||||||||||||||    
T  48103453 tgaaagagaaatgatatttgaaca--actatttgtgacaactttctctctcatactca 48103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 52437523 - 52437561
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  52437523 aataatttttgtgacaactttctctctcatactcacatt 52437561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 5771789 - 5771752
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  5771789 ataatttttgtgacaactttctctctcatactcacatt 5771752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 40328782 - 40328745
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  40328782 ataatttttgtgataattttctctctcatactcacatt 40328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 46281465 - 46281502
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  46281465 aataatttttgtgacaactttctctctcatactcacat 46281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 48220204 - 48220148
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 48220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 50824771 - 50824804
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  50824771 ataatttttgtgacaattttctctctcatactca 50824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 16836175 - 16836120
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| ||||| | ||||| ||| |||||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcatttt-gtgacaactttttctctcatactcacatt 16836120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 27742745 - 27742789
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||    
T  27742745 gttgtccaacaagttgttacataaaaaggttgttcaaataacatt 27742789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 29586028 - 29586060
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  29586028 ttttgcaacaattttctctctcatactcacatt 29586060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 30196724 - 30196780
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||  ||||| | ||||  ||||| |||||||||||||||||||||    
T  30196724 gagaaatgatatttctacaatcaattttttgacaactttctctctcatactcacatt 30196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 37515956 - 37515988
Alignment:
Q  112 gacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||||||||||||| |||||    
T  37515956 gacaattttctctctcatactcacattattctc 37515988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 38878836 - 38878792
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  |||  |||||||||||||||||    
T  38878836 gttgtccaacaagttgtcacataaaaatgttgttcaaataacatt 38878792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 40439775 - 40439731
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||    
T  40439775 gttgtccaacaaattgtcacataaaaaggttgttcaaataacatt 40439731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 41507254 - 41507199
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacatt 41507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 42468728 - 42468772
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  42468728 gttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 42468772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 47215765 - 47215733
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||||||||||||||||||    
T  47215765 ttttgtgacaattttctctctcatactcacatt 47215733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 23086 - 23143
Alignment:
Q  82 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  23086 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 23143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 1656 - 1711
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||    ||||| |||||||||||||||||||||| ||||    
T  1656 aagagaaatgatatttgaacaac---ttttgtgacaattttctctctcatactctcatt 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 5570373 - 5570338
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||| |||||||||||||||||||||||||||    
T  5570373 aatttttgtgacaattttctctctcatactcacatt 5570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 1287059 - 1287093
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||| ||||||||||||||||    
T  1287059 aagttgtcacaataaaggattgttcaaataacatt 1287093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 17182244 - 17182278
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||||||||||||||||    
T  17182244 aagttgtcataataaagggttgttcaaataacatt 17182278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 34442099 - 34442065
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||| |||||||||||||||||||||||||||||    
T  34442099 ttttgtgacaattttctctctcatactcacattgt 34442065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 2163702 - 2163757
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| | ||| | ||||||||||||||||||||| |||||    
T  2163702 gagaaatgatatttgtacaatcaattt-gtgacaattttctctctcatacttacatt 2163757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 2175335 - 2175390
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| | ||| | ||||||||||||||||||||| |||||    
T  2175335 gagaaatgatatttgtacaatcaattt-gtgacaattttctctctcatacttacatt 2175390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 2777352 - 2777320
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  2777352 ttttgcaacaattttctctctcatactcacatt 2777320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 11547565 - 11547533
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| ||||||||||||||||||||||||||    
T  11547565 ttttgcaacaattttctctctcatactcacatt 11547533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 17182129 - 17182169
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgtt 141  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  17182129 ataatttttgtgacaattttctctctcatattcacgttgtt 17182169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 18065025 - 18064981
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||||||||  |||  |||||||||||||||||    
T  18065025 gttgtccaacaagttgtcacataaaaaagttgttcaaataacatt 18064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 28630129 - 28630165
Alignment:
Q  102 taatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  28630129 taatttttgtgacaactttctctctcatactcacatt 28630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 32135491 - 32135436
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| |||||||  |||| ||||||| |||||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttg-tacaactttctctatcatactcacatt 32135436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 32644623 - 32644678
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactatttttt-gacaactttctctctcatactcacatt 32644678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 33712456 - 33712500
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||    
T  33712456 gttgtccaacaagttgttacataaaaaggttgttcaaataacatt 33712500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 31662 - 31605
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 31605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 101830 - 101792
Alignment:
Q  213 caacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  101830 caacaagttgtcacaagaaagggttgtgcaaataacatt 101792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 8888 - 8844
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||    
T  8888 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacatt 8844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 8988 - 8952
Alignment:
Q  107 tttgcgacaattttctctctcatactcacattgttct 143  Q
    |||| |||||||||||||||||||| |||||||||||    
T  8988 tttgtgacaattttctctctcatacacacattgttct 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 18707 - 18652
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| | ||| | ||||||||||||||||||||| |||||    
T  18707 gagaaatgatatttgtacaatcaattt-gtgacaattttctctctcatacttacatt 18652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 8608 - 8652
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||| ||||||||||||||| |||  |||||||||||||||||    
T  8608 gttgtctaacaagttgtcacaagaaatagttgttcaaataacatt 8652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 13492 - 13448
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||    
T  13492 gttgtccaataagttgtcacaaaaaagagttgtttaaataacatt 13448  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 59352 - 59396
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||    
T  59352 gttgtccaataagttgtcacaaaaaagagttgtttaaataacatt 59396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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