View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5081_low_11 (Length: 338)

Name: NF5081_low_11
Description: NF5081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5081_low_11
NF5081_low_11
[»] chr3 (46 HSPs)
chr3 (100-314)||(46568127-46568341)
chr3 (15-84)||(46568034-46568103)
chr3 (105-241)||(11581470-11581606)
chr3 (105-239)||(37351433-37351567)
chr3 (109-241)||(21200578-21200710)
chr3 (163-239)||(42510138-42510214)
chr3 (118-241)||(31261062-31261184)
chr3 (19-84)||(2341009-2341074)
chr3 (15-84)||(54278938-54279007)
chr3 (105-193)||(29374960-29375048)
chr3 (105-241)||(31454345-31454482)
chr3 (166-241)||(33755462-33755537)
chr3 (105-198)||(3365107-3365200)
chr3 (159-241)||(46431799-46431877)
chr3 (15-84)||(49841529-49841598)
chr3 (15-84)||(51448004-51448073)
chr3 (15-84)||(52138718-52138787)
chr3 (105-230)||(54128404-54128529)
chr3 (164-241)||(54365095-54365172)
chr3 (15-78)||(27917490-27917553)
chr3 (159-241)||(38430928-38431010)
chr3 (15-84)||(36820254-36820323)
chr3 (164-241)||(43254976-43255053)
chr3 (157-241)||(23534690-23534774)
chr3 (15-59)||(47542032-47542076)
chr3 (127-199)||(50249435-50249507)
chr3 (30-84)||(37227863-37227917)
chr3 (15-57)||(42510333-42510375)
chr3 (159-241)||(53998758-53998840)
chr3 (157-194)||(30572966-30573002)
chr3 (15-84)||(33272323-33272392)
chr3 (168-241)||(40116588-40116661)
chr3 (104-241)||(42026656-42026793)
chr3 (164-209)||(44395510-44395555)
chr3 (19-84)||(45236778-45236843)
chr3 (159-192)||(45289260-45289293)
chr3 (15-84)||(45728064-45728133)
chr3 (25-77)||(345013-345065)
chr3 (15-59)||(25191297-25191341)
chr3 (157-241)||(37598290-37598373)
chr3 (159-199)||(41842673-41842713)
chr3 (157-241)||(46146174-46146258)
chr3 (19-83)||(46431967-46432031)
chr3 (20-84)||(47233891-47233955)
chr3 (163-239)||(48508319-48508395)
chr3 (109-197)||(49841649-49841736)
[»] chr5 (60 HSPs)
chr5 (105-241)||(2712970-2713106)
chr5 (105-241)||(14749333-14749469)
chr5 (109-241)||(42199316-42199448)
chr5 (108-230)||(21952386-21952508)
chr5 (105-241)||(1525670-1525806)
chr5 (109-241)||(9917570-9917702)
chr5 (105-241)||(31636040-31636176)
chr5 (159-241)||(7359380-7359462)
chr5 (127-237)||(14667819-14667929)
chr5 (19-84)||(32516480-32516545)
chr5 (157-241)||(6788145-6788229)
chr5 (118-241)||(15489612-15489735)
chr5 (26-84)||(5305545-5305603)
chr5 (127-241)||(6889041-6889155)
chr5 (15-84)||(2075769-2075838)
chr5 (160-229)||(12576992-12577061)
chr5 (22-84)||(6368220-6368282)
chr5 (159-241)||(6859461-6859543)
chr5 (159-241)||(43035061-43035143)
chr5 (15-84)||(1287884-1287953)
chr5 (15-84)||(11002716-11002785)
chr5 (107-187)||(21915909-21915989)
chr5 (105-241)||(38578641-38578777)
chr5 (159-199)||(43475320-43475360)
chr5 (159-230)||(8082085-8082156)
chr5 (17-60)||(27998343-27998386)
chr5 (17-84)||(28186963-28187030)
chr5 (159-226)||(41109875-41109942)
chr5 (159-241)||(79593-79675)
chr5 (127-241)||(7678531-7678640)
chr5 (15-84)||(1275183-1275252)
chr5 (19-84)||(7678402-7678467)
chr5 (15-84)||(10639215-10639284)
chr5 (23-80)||(14667683-14667740)
chr5 (22-83)||(16134475-16134536)
chr5 (15-80)||(36123497-36123562)
chr5 (159-199)||(21093832-21093872)
chr5 (20-84)||(21952274-21952338)
chr5 (166-230)||(28005634-28005698)
chr5 (159-230)||(27799923-27799994)
chr5 (17-84)||(33006582-33006649)
chr5 (25-76)||(34194799-34194850)
chr5 (22-80)||(21093701-21093759)
chr5 (15-84)||(10083034-10083102)
chr5 (118-199)||(11675549-11675630)
chr5 (15-84)||(12492682-12492751)
chr5 (109-194)||(15588707-15588792)
chr5 (19-60)||(16347697-16347738)
chr5 (176-237)||(18698891-18698952)
chr5 (109-142)||(21193859-21193892)
chr5 (15-84)||(24178428-24178497)
chr5 (15-84)||(28977152-28977221)
chr5 (105-142)||(33667242-33667279)
chr5 (15-64)||(34272940-34272989)
chr5 (105-142)||(36123411-36123448)
chr5 (185-238)||(40938029-40938082)
chr5 (21-58)||(43558135-43558172)
chr5 (105-177)||(10082923-10082995)
chr5 (201-241)||(15588508-15588548)
chr5 (48-84)||(15677489-15677525)
[»] chr2 (48 HSPs)
chr2 (105-241)||(43752067-43752203)
chr2 (159-241)||(18958991-18959073)
chr2 (109-241)||(43832128-43832260)
chr2 (109-241)||(26784460-26784592)
chr2 (107-241)||(42543263-42543397)
chr2 (161-241)||(38435034-38435114)
chr2 (159-241)||(19235104-19235186)
chr2 (15-84)||(8180698-8180767)
chr2 (19-76)||(45077670-45077727)
chr2 (157-237)||(26850313-26850393)
chr2 (113-241)||(37481737-37481865)
chr2 (159-205)||(45077835-45077881)
chr2 (109-238)||(23714384-23714513)
chr2 (15-84)||(23714553-23714622)
chr2 (109-238)||(24102056-24102185)
chr2 (15-84)||(24102225-24102294)
chr2 (168-241)||(33504312-33504385)
chr2 (157-242)||(36869936-36870021)
chr2 (161-241)||(12141626-12141706)
chr2 (15-79)||(36183369-36183433)
chr2 (111-199)||(43260436-43260524)
chr2 (105-241)||(44437841-44437977)
chr2 (15-57)||(9647927-9647969)
chr2 (105-195)||(42092543-42092633)
chr2 (15-84)||(3865990-3866059)
chr2 (23-84)||(9556663-9556724)
chr2 (19-84)||(12734623-12734688)
chr2 (19-84)||(38429806-38429871)
chr2 (19-84)||(41763336-41763401)
chr2 (15-79)||(7825276-7825340)
chr2 (118-194)||(7825399-7825475)
chr2 (109-241)||(9556489-9556621)
chr2 (159-199)||(42149808-42149848)
chr2 (159-194)||(3481221-3481256)
chr2 (167-241)||(5759115-5759189)
chr2 (109-179)||(13240927-13240997)
chr2 (157-191)||(33287495-33287529)
chr2 (159-237)||(45436922-45437000)
chr2 (15-84)||(2610446-2610515)
chr2 (15-84)||(4598859-4598928)
chr2 (161-230)||(14197289-14197358)
chr2 (159-239)||(32365035-32365116)
chr2 (15-84)||(38452984-38453053)
chr2 (19-55)||(1456155-1456191)
chr2 (109-241)||(12026125-12026257)
chr2 (20-84)||(18188706-18188769)
chr2 (157-241)||(37470253-37470337)
chr2 (157-197)||(38860256-38860296)
[»] chr8 (60 HSPs)
chr8 (159-241)||(32931041-32931123)
chr8 (159-241)||(38178380-38178462)
chr8 (127-240)||(29520698-29520810)
chr8 (118-242)||(29700315-29700439)
chr8 (105-241)||(32043616-32043752)
chr8 (106-241)||(16351405-16351540)
chr8 (159-241)||(35362770-35362852)
chr8 (109-241)||(5908678-5908808)
chr8 (160-241)||(45512615-45512696)
chr8 (105-229)||(25985545-25985668)
chr8 (15-84)||(36545065-36545134)
chr8 (15-84)||(39760719-39760788)
chr8 (157-230)||(45331699-45331772)
chr8 (20-80)||(39051065-39051125)
chr8 (106-185)||(25985776-25985854)
chr8 (147-241)||(7531764-7531858)
chr8 (22-84)||(16252860-16252922)
chr8 (127-240)||(10080028-10080141)
chr8 (110-199)||(16917215-16917303)
chr8 (15-84)||(36395245-36395314)
chr8 (157-230)||(38409153-38409226)
chr8 (20-84)||(28300407-28300471)
chr8 (165-241)||(35914721-35914797)
chr8 (29-84)||(32043522-32043577)
chr8 (162-241)||(37826374-37826453)
chr8 (127-210)||(39051190-39051273)
chr8 (159-241)||(11733827-11733909)
chr8 (19-84)||(15215566-15215631)
chr8 (15-84)||(30748377-30748446)
chr8 (15-84)||(36565536-36565605)
chr8 (15-84)||(39946775-39946844)
chr8 (15-84)||(42493599-42493668)
chr8 (159-199)||(7046414-7046453)
chr8 (159-199)||(24558567-24558607)
chr8 (109-193)||(30559723-30559807)
chr8 (24-84)||(36069570-36069630)
chr8 (105-241)||(39953384-39953520)
chr8 (15-59)||(40813240-40813284)
chr8 (165-229)||(41971910-41971974)
chr8 (159-239)||(43904787-43904867)
chr8 (169-241)||(45419325-45419397)
chr8 (159-238)||(30198389-30198468)
chr8 (158-238)||(35643729-35643813)
chr8 (15-74)||(36143287-36143346)
chr8 (170-241)||(39967619-39967684)
chr8 (15-53)||(30456537-30456575)
chr8 (127-241)||(30783162-30783271)
chr8 (20-58)||(44681397-44681435)
chr8 (15-84)||(12492137-12492206)
chr8 (203-252)||(12692353-12692402)
chr8 (19-84)||(16351312-16351377)
chr8 (20-77)||(29520583-29520640)
chr8 (19-84)||(30783335-30783400)
chr8 (20-84)||(10080200-10080264)
chr8 (32-84)||(16705697-16705749)
chr8 (161-241)||(18742143-18742222)
chr8 (161-241)||(18747107-18747186)
chr8 (20-84)||(33828052-33828116)
chr8 (15-75)||(39953568-39953628)
chr8 (36-84)||(44681334-44681382)
[»] chr4 (81 HSPs)
chr4 (159-241)||(21945758-21945840)
chr4 (157-241)||(34233144-34233228)
chr4 (105-240)||(26356645-26356780)
chr4 (108-241)||(10209063-10209198)
chr4 (109-237)||(54470237-54470365)
chr4 (20-84)||(45423542-45423606)
chr4 (106-241)||(46372051-46372186)
chr4 (159-241)||(28351639-28351721)
chr4 (157-241)||(21107069-21107154)
chr4 (15-84)||(25257874-25257943)
chr4 (112-241)||(31961386-31961515)
chr4 (15-84)||(49987346-49987415)
chr4 (118-190)||(28497528-28497600)
chr4 (105-241)||(31897548-31897684)
chr4 (105-241)||(35555767-35555903)
chr4 (21-84)||(21106908-21106971)
chr4 (105-232)||(25257711-25257837)
chr4 (105-187)||(2589016-2589098)
chr4 (159-241)||(13805385-13805467)
chr4 (19-77)||(45094464-45094522)
chr4 (109-187)||(46715546-46715624)
chr4 (15-84)||(12494668-12494737)
chr4 (15-84)||(23906596-23906665)
chr4 (159-228)||(29398898-29398967)
chr4 (15-84)||(31960109-31960178)
chr4 (15-84)||(43070059-43070128)
chr4 (15-84)||(43433836-43433905)
chr4 (157-230)||(47147451-47147524)
chr4 (15-84)||(56375208-56375277)
chr4 (161-241)||(25967381-25967461)
chr4 (21-84)||(2588905-2588968)
chr4 (15-78)||(18499791-18499854)
chr4 (105-240)||(44360113-44360247)
chr4 (18-84)||(18966474-18966540)
chr4 (15-81)||(41366373-41366437)
chr4 (15-57)||(44860772-44860814)
chr4 (163-225)||(56439743-56439805)
chr4 (15-84)||(1777310-1777379)
chr4 (15-84)||(10775717-10775786)
chr4 (15-84)||(17900398-17900467)
chr4 (105-186)||(17900506-17900587)
chr4 (19-84)||(20105766-20105831)
chr4 (109-230)||(31339566-31339686)
chr4 (19-84)||(34233328-34233393)
chr4 (19-84)||(44686862-44686927)
chr4 (19-80)||(45175930-45175991)
chr4 (31-84)||(45185312-45185365)
chr4 (19-84)||(45205143-45205208)
chr4 (15-84)||(48622836-48622905)
chr4 (15-84)||(50286889-50286958)
chr4 (27-68)||(51841502-51841543)
chr4 (15-84)||(52569810-52569879)
chr4 (20-60)||(4137017-4137057)
chr4 (19-63)||(30853338-30853382)
chr4 (15-59)||(33709837-33709881)
chr4 (28-80)||(44360014-44360066)
chr4 (185-241)||(49987514-49987570)
chr4 (107-187)||(51550422-51550502)
chr4 (159-230)||(11389804-11389875)
chr4 (159-226)||(47611807-47611874)
chr4 (17-59)||(25755237-25755279)
chr4 (159-241)||(37488171-37488253)
chr4 (26-84)||(38571042-38571099)
chr4 (16-58)||(42293579-42293621)
chr4 (160-238)||(50680821-50680899)
chr4 (15-84)||(436147-436216)
chr4 (23-84)||(25967562-25967623)
chr4 (171-200)||(28485628-28485657)
chr4 (15-84)||(31403315-31403384)
chr4 (15-84)||(33227127-33227196)
chr4 (20-77)||(40933198-40933255)
chr4 (15-84)||(48174388-48174457)
chr4 (15-84)||(51252754-51252823)
chr4 (15-84)||(53707712-53707781)
chr4 (159-240)||(55028896-55028977)
chr4 (36-84)||(10208977-10209025)
chr4 (15-75)||(27991719-27991779)
chr4 (19-79)||(35690226-35690286)
chr4 (169-241)||(35690361-35690433)
chr4 (163-239)||(39708517-39708593)
chr4 (162-225)||(40933053-40933114)
[»] chr7 (63 HSPs)
chr7 (157-241)||(28628053-28628137)
chr7 (109-241)||(47848704-47848836)
chr7 (113-236)||(48202827-48202950)
chr7 (159-241)||(38135333-38135414)
chr7 (109-241)||(6420610-6420742)
chr7 (15-84)||(14593679-14593748)
chr7 (15-84)||(36514500-36514569)
chr7 (15-84)||(37617862-37617931)
chr7 (105-241)||(18605266-18605402)
chr7 (105-199)||(18637588-18637682)
chr7 (105-199)||(18651022-18651116)
chr7 (105-187)||(36514381-36514463)
chr7 (15-84)||(5335840-5335909)
chr7 (109-230)||(5335950-5336071)
chr7 (15-84)||(16013202-16013271)
chr7 (163-232)||(26742025-26742094)
chr7 (15-84)||(30200254-30200323)
chr7 (15-84)||(33072872-33072941)
chr7 (15-84)||(35906496-35906565)
chr7 (15-84)||(36869584-36869653)
chr7 (127-220)||(39812005-39812098)
chr7 (159-199)||(1740881-1740921)
chr7 (105-241)||(14593791-14593922)
chr7 (105-241)||(16013314-16013445)
chr7 (15-78)||(12841576-12841639)
chr7 (17-84)||(36651914-36651981)
chr7 (19-58)||(47848596-47848635)
chr7 (159-241)||(1569096-1569178)
chr7 (15-57)||(24550009-24550051)
chr7 (109-199)||(25579239-25579329)
chr7 (18-84)||(34869341-34869407)
chr7 (22-84)||(39811882-39811944)
chr7 (15-84)||(11593878-11593947)
chr7 (15-84)||(13859303-13859372)
chr7 (176-241)||(19119544-19119608)
chr7 (110-225)||(27021831-27021943)
chr7 (15-84)||(31005141-31005210)
chr7 (19-84)||(40008712-40008777)
chr7 (15-84)||(44855467-44855536)
chr7 (15-84)||(49029194-49029263)
chr7 (105-209)||(19262586-19262689)
chr7 (181-241)||(30814791-30814851)
chr7 (16-84)||(40139211-40139279)
chr7 (167-226)||(36101900-36101959)
chr7 (19-58)||(42187393-42187432)
chr7 (108-187)||(48736073-48736152)
chr7 (161-227)||(7220838-7220904)
chr7 (22-84)||(27022001-27022063)
chr7 (159-241)||(36136844-36136926)
chr7 (22-84)||(43282330-43282392)
chr7 (22-84)||(48736194-48736256)
chr7 (15-56)||(1740715-1740756)
chr7 (159-208)||(5418160-5418209)
chr7 (162-199)||(28359340-28359377)
chr7 (15-84)||(29653849-29653918)
chr7 (15-84)||(33350101-33350170)
chr7 (19-84)||(39906665-39906730)
chr7 (165-206)||(40008573-40008614)
chr7 (19-84)||(45836775-45836840)
chr7 (16-84)||(24598441-24598509)
chr7 (166-230)||(27893682-27893746)
chr7 (109-201)||(35713725-35713817)
chr7 (105-185)||(45558388-45558468)
[»] chr1 (69 HSPs)
chr1 (161-241)||(2544681-2544760)
chr1 (105-197)||(29807892-29807984)
chr1 (19-84)||(4379927-4379992)
chr1 (164-241)||(6025690-6025767)
chr1 (107-241)||(27637751-27637887)
chr1 (15-84)||(52442799-52442868)
chr1 (166-238)||(38868969-38869041)
chr1 (159-238)||(42501188-42501267)
chr1 (105-187)||(40419665-40419747)
chr1 (159-241)||(50771676-50771758)
chr1 (161-238)||(5338806-5338883)
chr1 (15-84)||(9509236-9509305)
chr1 (105-241)||(12261833-12261969)
chr1 (159-230)||(13827701-13827772)
chr1 (111-241)||(3818976-3819106)
chr1 (159-241)||(33560978-33561060)
chr1 (15-84)||(1210663-1210732)
chr1 (160-241)||(8796290-8796371)
chr1 (15-84)||(9592652-9592721)
chr1 (22-79)||(16822319-16822376)
chr1 (164-241)||(17815564-17815641)
chr1 (15-84)||(30202425-30202494)
chr1 (164-241)||(30834097-30834174)
chr1 (169-241)||(9599514-9599586)
chr1 (15-59)||(26016355-26016399)
chr1 (161-241)||(32404646-32404726)
chr1 (157-241)||(43898307-43898391)
chr1 (101-241)||(52442648-52442788)
chr1 (15-58)||(9599715-9599758)
chr1 (157-224)||(43375724-43375791)
chr1 (172-235)||(49377417-49377480)
chr1 (159-241)||(36339923-36340005)
chr1 (159-241)||(40416451-40416533)
chr1 (19-84)||(8391694-8391759)
chr1 (15-84)||(8671838-8671907)
chr1 (109-210)||(14225980-14226081)
chr1 (15-84)||(14226122-14226191)
chr1 (15-84)||(22090012-22090081)
chr1 (157-222)||(27704086-27704151)
chr1 (157-230)||(35828681-35828754)
chr1 (106-199)||(39422205-39422297)
chr1 (15-84)||(40419557-40419626)
chr1 (109-226)||(43423749-43423866)
chr1 (15-84)||(49347688-49347757)
chr1 (105-241)||(10272285-10272420)
chr1 (109-241)||(28528385-28528517)
chr1 (15-59)||(43240701-43240745)
chr1 (109-193)||(48431574-48431658)
chr1 (105-184)||(18793165-18793244)
chr1 (19-58)||(34827423-34827462)
chr1 (106-241)||(37263358-37263493)
chr1 (15-77)||(34792651-34792713)
chr1 (159-209)||(50636173-50636223)
chr1 (19-84)||(696191-696256)
chr1 (19-57)||(18359684-18359724)
chr1 (105-186)||(23791819-23791900)
chr1 (164-229)||(29577274-29577339)
chr1 (160-241)||(50806750-50806831)
chr1 (166-241)||(50846652-50846724)
chr1 (20-84)||(51234537-51234602)
chr1 (15-84)||(51441060-51441129)
chr1 (157-241)||(853905-853989)
chr1 (24-80)||(4590823-4590879)
chr1 (169-241)||(9509408-9509480)
chr1 (159-207)||(12135805-12135853)
chr1 (28-84)||(16273115-16273171)
chr1 (159-187)||(17640227-17640255)
chr1 (24-80)||(17815402-17815457)
chr1 (162-198)||(30017204-30017240)
[»] chr6 (31 HSPs)
chr6 (105-241)||(9593828-9593962)
chr6 (157-229)||(4948436-4948508)
chr6 (157-229)||(4955407-4955479)
chr6 (25-84)||(9568588-9568647)
chr6 (18-80)||(10617525-10617586)
chr6 (159-241)||(21870183-21870267)
chr6 (15-84)||(32755837-32755906)
chr6 (134-230)||(9749355-9749451)
chr6 (166-241)||(8364643-8364718)
chr6 (127-241)||(579466-579580)
chr6 (127-197)||(5897525-5897595)
chr6 (117-199)||(14389330-14389412)
chr6 (134-199)||(6906989-6907054)
chr6 (15-80)||(12134200-12134265)
chr6 (15-84)||(28085294-28085363)
chr6 (15-84)||(33998299-33998368)
chr6 (127-199)||(6293548-6293620)
chr6 (15-63)||(6293685-6293733)
chr6 (161-240)||(1747762-1747841)
chr6 (15-78)||(33083976-33084039)
chr6 (163-241)||(4797010-4797088)
chr6 (20-58)||(5631741-5631779)
chr6 (15-84)||(14030724-14030794)
chr6 (19-84)||(9594007-9594072)
chr6 (19-84)||(10100152-10100217)
chr6 (18-83)||(17221946-17222011)
chr6 (105-193)||(24665836-24665925)
chr6 (19-76)||(30031178-30031235)
chr6 (118-199)||(32913424-32913505)
chr6 (163-239)||(7133830-7133906)
chr6 (163-239)||(7136753-7136829)
[»] scaffold0157 (1 HSPs)
scaffold0157 (15-84)||(25740-25809)
[»] scaffold0018 (3 HSPs)
scaffold0018 (161-230)||(43999-44068)
scaffold0018 (159-241)||(178540-178622)
scaffold0018 (15-84)||(31386-31455)
[»] scaffold0325 (1 HSPs)
scaffold0325 (105-241)||(11824-11959)
[»] scaffold0491 (1 HSPs)
scaffold0491 (161-241)||(3948-4027)


Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 100 - 314
Target Start/End: Original strand, 46568127 - 46568341
Alignment:
Q  100 attggggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  46568127 attggggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcacatggaggatcgtcaaatca 46568226  T
Q  200 tttgaggcagtggaggacctagaaaaactatcagagaaactaactattaagaatagattattgaggtggataaaaattgtatatgatggagcattatggg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46568227 tttgaggcagtggaggacctagaaaaactatcagagaaactaactattaagaatagattattgaggtggataaaaattgtatatgatggagcattatggg 46568326  T
Q  300 atccatatagccaac 314  Q
    |||||||||||||||    
T  46568327 atccatatagccaac 46568341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 46568034 - 46568103
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46568034 agcagagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattagaaatgacaacatt 46568103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 11581470 - 11581606
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| || |||||| ||||||||| ||| |||||||| ||||||||||| |||||| |||||||| |||  |||||||||| | ||    
T  11581470 ggtagaaactagacttaggtggtttgggtatgtagagagaagacatgtgaattatgtagtaagaagagtacatcagatgtaggtgagtcaaatcactaga 11581569  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || |   || |||||||||||||||| ||||||||||    
T  11581570 ggtatgagaagacctagaaaaactataagagaaacta 11581606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 37351433 - 37351567
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||||||||   || ||||||||||| |||| ||||||||||||    |||||||||||||||||||||||||| |  || ||||||| | ||    
T  37351433 ggtagaaactagacttgagtggtttgggcatgtggagagaagtcatgtgaatgcggtagtaaggagagtagatcagatggaagggaggcaaatcactaga 37351532  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaac 239  Q
    || || ||| |||||||||||||||| ||||||||    
T  37351533 ggtaggggaagacctagaaaaactattagagaaac 37351567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 21200578 - 21200710
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||| || |||||||||||||||| ||| |||||  | | || |||||||||||||||||| ||||||  ||||||||||| | | || |    
T  21200578 gaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcacatggagagtagtcaaatcactaggggga 21200677  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| |||||||||||||||| ||| ||||||    
T  21200678 gaggaagacctagaaaaactattagacaaacta 21200710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 42510214 - 42510138
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||  ||| |||||||||||||||||||||||||    
T  42510214 gtaaggagagtagatcagatggaggatagtcagatcactagaggcaaaggaagacctagaaaaactatcagagaaac 42510138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 31261184 - 31261062
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggac 217  Q
    ||||| || ||||||||||| |||| |||  ||||  | | |||||||| | |||||||||||||||||| ||||||||||| | ||||||| ||| |||    
T  31261184 cttagatggtttgggcatgttgagagaagatatgtagattttgtagtaatgtgagtagatcagatggagg-tagtcaaatcactagaggcagaggaagac 31261086  T
Q  218 ctagaaaaactatcagagaaacta 241  Q
    ||||||||||||| ||||||||||    
T  31261085 ctagaaaaactataagagaaacta 31261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 2341074 - 2341009
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||  ||||||||||| |||||||||||| ||| ||||||||||||| ||||||    
T  2341074 gagatgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacatt 2341009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 54278938 - 54279007
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||  ||| |||||||||||||||| ||||||| ||||||| ||||    
T  54278938 agcagagatgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccatt 54279007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 29374960 - 29375048
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtc 193  Q
    |||||||||| ||||||| |||||||||| |||||||||||| | |||  | | |||||||||||| |||||| |||||||| ||||||    
T  29374960 ggtagaaactcgacttaggtgatttgggcttgtagagaaaagacctgtagattttgtagtaaggagtgtagattagatggagaatagtc 29375048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 31454482 - 31454345
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||| || | |||| ||||||||||| |||  ||| | | | |||||| ||||||||||||||||||||||  ||||||||| || ||    
T  31454482 ggtagaaactagacttggtgg-tttgtgcatgtagagagaagaaatgcggattctgtagttaggagagtagatcagatggaggggagtcaaatctttaga 31454384  T
Q  205 g--gcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |  | || ||| |||||||||||||||| || |||||||    
T  31454383 gatgtaggggatgacctagaaaaactataagggaaacta 31454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 33755537 - 33755462
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||| |||  |||| | ||||||| |||  ||||||||||||||| ||||||||||    
T  33755537 aggagagtagatcagatggaggatggtcggatcactagaggcagaggaaaacctagaaaaactataagagaaacta 33755462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 3365107 - 3365200
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatc 198  Q
    |||||||||||||||||  ||||||  ||||||||||| |||  ||||  ||| |||||||| |||| ||||| |||||||||||| |||||||    
T  3365107 ggtagaaactagacttatatgattttagcatgtagagagaagaaatgtagactgtgtagtaaagagaatagattagatggaggataatcaaatc 3365200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 46431877 - 46431799
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||| |||||||||||| |||||||| | |||||||     || ||||||||||||| ||||||||||    
T  46431877 tgtagtaaggagagtagataagatggaggatactcaaatcactagaggcag----agaactagaaaaactataagagaaacta 46431799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 49841529 - 49841598
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| ||||||||||||||||||||||||||  ||||||||||| || |   ||||||||||||||||||    
T  49841529 agcatagatgaggatgttgtgttggatgtgtagtaagactagacgaggtaagattagaaatgacaacatt 49841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 51448073 - 51448004
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  51448073 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 51448004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 52138718 - 52138787
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  52138718 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 52138787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 54128404 - 54128529
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||| ||| ||||| || |||||||||||||||||||| | |||  |  ||| |||| | ||||||||||||||||||| |||||| |||    ||    
T  54128404 ggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgtagagtagatcagatggaggttagtcagatcgaaaga 54128503  T
Q  205 ggcagtggaggacctagaaaaactat 230  Q
    || || ||| ||||||||||||||||    
T  54128504 ggtagaggaagacctagaaaaactat 54128529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 54365172 - 54365095
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||| ||| |||||||||| | ||   ||||||| ||| |||||||||||||||| ||||||||||    
T  54365172 taaggagagtagatcaaatgaaggatagtcagaccacgagaggcagaggaagacctagaaaaactataagagaaacta 54365095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 27917490 - 27917553
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgac 78  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| |||||  ||||| ||||||    
T  27917490 agcagagatgaggatgttgtgttggatgagtggtaagcctagacgagatttgattaggaatgac 27917553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 38430928 - 38431010
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||| | |||||||||||||||||||| ||||||||||   |||| || ||| ||| |||||||||||  ||||||||||    
T  38430928 tgtagtatgaagagtagatcagatggaggagagtcaaatcaaaagaggtagaggaagacttagaaaaactacaagagaaacta 38431010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36820323 - 36820254
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||| ||| ||||| |||||||||||| ||||||||||| |||| | |||||||||||| |||||    
T  36820323 agcaaagataaggttgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacatt 36820254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 43254976 - 43255053
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||| |||||||||||  ||||| |||| | |||| || ||  |||||||||||||||| ||||||||||    
T  43254976 taaggagagtagttcagatggagggaagtcagatcactagaggtaggggtagacctagaaaaactatgagagaaacta 43255053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 23534774 - 23534690
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||||||||||| |||||| | |||| | |||| || ||| |||| | ||||| ||| | ||||||||    
T  23534774 tatgtagtaaggagagtagatcagatggatgatagttagatcactagaggtagaggaagacccaaaaaaattataacagaaacta 23534690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 47542076 - 47542032
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  47542076 agcagagatgaggatgttgcgttggatgagtggtaagactagaca 47542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 50249435 - 50249507
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||||||||||  ||| |||||  | | | |||||||||||||||||||||||| ||||||||| ||||    
T  50249435 tttgggcatgtagagtgaagacatgtagattctttagtaaggagagtagatcagatgggggatagtcatatca 50249507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 37227863 - 37227917
Alignment:
Q  30 gttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||| |||||| ||||||||||||| || | |||||||||||| |||||    
T  37227863 gttgtgttggttgtgtggtaagactagacaatataggattagaaatgaccacatt 37227917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 42510375 - 42510333
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactaga 57  Q
    |||||||||||||||||||  ||||||||||| ||||||||||    
T  42510375 agcagagatgaggatgttgcattggatgtgtggtaagactaga 42510333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 53998840 - 53998758
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||| |||||| ||| |||||| |||||||||||||  ||| | ||||||  ||| |||| ||||||||||| ||||||||||    
T  53998840 tgtattaaggaaagtggatcaggtggaggatagtcagttcactagaggcaaaggaagacccagaaaaactataagagaaacta 53998758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 30573002 - 30572966
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtca 194  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  30573002 tatgtagtaaggaga-tagatcagatggaggatagtca 30572966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 33272392 - 33272323
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  33272392 agcagagatgaggatgttgcattggatgagtggtaagactagacatgataggattaagaatgacaccatt 33272323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 40116661 - 40116588
Alignment:
Q  168 gagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| |||||| ||| |||||||||| |||| | ||| ||  ||| |||||||||||||||| ||||||||||    
T  40116661 gagagaagatcatatgaaggatagtcagatcactagagccaaaggaagacctagaaaaactataagagaaacta 40116588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 42026793 - 42026656
Alignment:
Q  104 gggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttg 203  Q
    |||| |||||||| ||||| || |||| || |||||||| ||  | |||  | ||| ||||||||||||||||||||| |||||||| ||| |||  | |    
T  42026793 gggtggaaactaggcttaggtggtttgagcttgtagagagaaaacttgtagattatttagtaaggagagtagatcagacggaggataatcacatccctag 42026694  T
Q  204 aggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||| ||| |||| |  ||| |||| ||||||||||    
T  42026693 aggcagaggaagaccaatcaaagctataagagaaacta 42026656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 44395510 - 44395555
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcag 209  Q
    |||||||||||||||| ||||||| ||||||||||| | |||||||    
T  44395510 taaggagagtagatcaaatggagggtagtcaaatcactagaggcag 44395555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 45236778 - 45236843
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||| ||||||||| |||||||||||| |||||||||||  |||   ||||||||||||| ||||    
T  45236778 gagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacaccatt 45236843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 45289293 - 45289260
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagt 192  Q
    ||||||||| ||||||||||||||||||||||||    
T  45289293 tgtagtaagaagagtagatcagatggaggatagt 45289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 45728064 - 45728133
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| | |||||| ||| |||||| |||| | || | ||||||||||||| ||||    
T  45728064 agcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaatgacatcatt 45728133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 345065 - 345013
Alignment:
Q  25 aggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatga 77  Q
    |||||||| |||||||| |||| ||||||||||| |||| | |||||||||||    
T  345065 aggatgttatgttggatttgtggtaagactagacgagataggattagaaatga 345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 25191297 - 25191341
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||||||||||||| | |||||| ||| ||||||||||||    
T  25191297 agcagagatgaggatgttgcgctggatgagtggtaagactagaca 25191341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 37598373 - 37598290
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||| ||||||||||||||| ||  |||| ||||||   |||||||  || |||||||||||||| | ||||||||||    
T  37598373 tatgtagtaagaagagtagatcagatgaagcgtagttaaatcaccagaggcagaagatgacctagaaaaact-taagagaaacta 37598290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 41842713 - 41842673
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||| |||||||||||| |||||||||||||| ||||    
T  41842713 tgtagtaatgagagtagatcaaatggaggatagtcagatca 41842673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 46146174 - 46146258
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| ||||||  ||||||| |||||  |||||||||||||| | ||||||  ||| || ||||||||||||| | ||||||||    
T  46146174 tatgttgtaaggctagtagataagatgatggatagtcaaatcactagaggcataggaagatctagaaaaactataaaagaaacta 46146258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 46432031 - 46431967
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacat 83  Q
    |||||| ||||||||  ||||||||||| |||||||||||| ||| |  ||||||||||| ||||    
T  46432031 gagatggggatgttgcattggatgtgtggtaagactagacaggatagggttagaaatgactacat 46431967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 47233955 - 47233891
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||| ||| |||||||| ||| |||||||||||| |||   ||||||||||||| ||||    
T  47233955 agatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccatt 47233891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 48508319 - 48508395
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    ||||| |||||||||||||||||||| |||||  |||   |||| || ||| ||||||| |||||||| ||||||||    
T  48508319 gtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataagagaaac 48508395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 49841649 - 49841736
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaat 197  Q
    ||||||||||| || || ||||||| |||||||| ||| ||| |||  | | |||||||||||||| |||||||| ||| |||||||||    
T  49841649 gaaactagactaaggtggtttgggcgtgtagagagaagacat-tgacttctttagtaaggagagtaaatcagatgaagggtagtcaaat 49841736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 2712970 - 2713106
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||| ||||||||||| || |||||||||||||||| ||| | |||| | | ||||  |||||||||||||||||||||||| |||||||||| | ||    
T  2712970 ggtagagactagacttaggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcagatggaggagagtcaaatcactaga 2713069  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| ||| |||||||||||||||| ||||||||||    
T  2713070 gtcaggggaagacctagaaaaactataagagaaacta 2713106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 14749333 - 14749469
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| || ||||| |||||||||| ||| | |||| | | ||| ||||||||||| |||||||||||||  |||||||||| |  |    
T  14749333 ggtagaaactagacttagatggtttggacatgtagagagaagacctgtggattctgttgtaaggagagtcgatcagatggaggggagtcaaatcactaaa 14749432  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| ||| |||||||||||||||| ||||||||||    
T  14749433 ggcagaggaagacctagaaaaactataagagaaacta 14749469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 42199316 - 42199448
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||| || |||||||||||||||| ||| |||||  | | ||||||||||||||||||||| ||||||  ||||||||||| | | || |    
T  42199316 gaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggagagtagtcaaatcactaggggga 42199415  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | | | |||||||||||||||| ||| ||||||    
T  42199416 gagaaagacctagaaaaactattagacaaacta 42199448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 21952386 - 21952508
Alignment:
Q  108 agaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggc 207  Q
    |||||||||||| || || ||||| |||||||||| ||||| |||| | | | ||||||||||| |||||||||||||||  |||||||||| | ||||     
T  21952386 agaaactagactcaggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggaggggagtcaaatcactagaggt 21952485  T
Q  208 agtggaggacctagaaaaactat 230  Q
    || ||| ||||||||||||||||    
T  21952486 aggggaagacctagaaaaactat 21952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 1525670 - 1525806
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| ||  |||| |||||||||| ||| |  ||||| | || ||| ||||||||||||||||||||||| ||||| |||| | ||    
T  1525670 ggtagaaactagacttaggtggcttggacatgtagagagaagacccgtgaattctgcagttaggagagtagatcagatggaggagagtcagatcactaga 1525769  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||  |||||||||||||||  ||||||||||    
T  1525770 ggtaggggtagacctagaaaaactacaagagaaacta 1525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 9917702 - 9917570
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||| | |||||||| |||| || |||| ||| ||| |||||  | | |||||||| |||||| |||||||||||||||||||||||||   ||| ||    
T  9917702 gaaactcggcttagttggtttgtgcgtgtaaagagaagacatgttgattttgtagtaaagagagtcgatcagatggaggatagtcaaatcacaagagaca 9917603  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| |||||||||||||||| ||||||||||    
T  9917602 gaggatgacctagaaaaactattagagaaacta 9917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 31636176 - 31636040
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| || |||||||||||||||| ||| |  ||| |   ||||||||||||||||||| |||||| ||  |||||||||| | ||    
T  31636176 ggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattagatggtggggagtcaaatcactaga 31636077  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |  || ||| || ||||||||||||| ||||||||||    
T  31636076 gataggggaagatctagaaaaactattagagaaacta 31636040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 7359462 - 7359380
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||||| |||   ||||||||||| || ||||||||||    
T  7359462 tgtagtaaggagagtagatcagatggaggatagtcatatcactagaggcagaggaaagcctagaaaaaccataagagaaacta 7359380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 14667819 - 14667929
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    |||||||||||||||| ||| |||||  | |||||||||||||||||||||||||||||  ||||| | |||| | ||||||| |||   ||||||||||    
T  14667819 tttgggcatgtagagagaagacatgtacattatgtagtaaggagagtagatcagatggattatagttatatcactagaggcagcggaaatcctagaaaaa 14667918  T
Q  227 ctatcagagaa 237  Q
    |||| ||||||    
T  14667919 ctataagagaa 14667929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 32516480 - 32516545
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| || |||||||||||||||||    
T  32516480 gagatgatgatgttgtgttggatgtgtggtaagactagacaggatagacttagaaatgacaacatt 32516545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 6788145 - 6788229
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||| || |||||||||||| |||| |||| | ||||||| ||| |||||||||||||||||| || |||||    
T  6788145 tatgtagtaaggagagtcgaccagatggaggatggtcagatcactagaggcagaggaagacctagaaaaactatcaaaggaacta 6788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 15489735 - 15489612
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggac 217  Q
    ||||| || |||||||||||||||| |||   |||  | | |||| |||||||||||||| ||||||||||||||  ||||| | ||||||| ||| |||    
T  15489735 cttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggagagtagattagatggaggatagttgaatcactagaggcagaggaagac 15489636  T
Q  218 ctagaaaaactatcagagaaacta 241  Q
    |||||||||| || ||||||||||    
T  15489635 ctagaaaaacaataagagaaacta 15489612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 5305545 - 5305603
Alignment:
Q  26 ggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  5305545 ggatgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacatt 5305603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 6889041 - 6889155
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    ||||| |||||||||| ||| | |||| | ||||| ||||||| | || || |||||||||||||||||| || |||||| || ||| | ||||||||||    
T  6889041 tttggacatgtagagagaagacttgtggattatgtggtaaggacaataaattagatggaggatagtcaaaccacttgaggaagaggaaggcctagaaaaa 6889140  T
Q  227 ctatcagagaaacta 241  Q
    |||| ||||||||||    
T  6889141 ctataagagaaacta 6889155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 2075838 - 2075769
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||||||| | ||||| ||||||||||||    
T  2075838 agcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacatt 2075769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 12577061 - 12576992
Alignment:
Q  160 gtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaacta 229  Q
    |||||||||||||||||||||||||||| |||||  |||| | ||||||| ||| |||||||||||||||    
T  12577061 gtagtaaggagagtagatcagatggagggtagtcctatcactagaggcagaggaagacctagaaaaacta 12576992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 6368282 - 6368220
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||| ||| |||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  6368282 atgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaacatt 6368220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 6859461 - 6859543
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||| || || || |||||||||||||||||| || | |||| || ||| |||||||||||||||| ||||||||||    
T  6859461 tgtagtaaggggaataaattagatggaggatagtcaaaccactagaggaagaggaagacctagaaaaactataagagaaacta 6859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 43035061 - 43035143
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||| ||||||||||||| || |||||||||||| ||| | ||||||| ||| || |||||||||| ||| |||||||||    
T  43035061 tgtagtagggagagtagatcaaatcgaggatagtcaactcactagaggcagaggaagaactagaaaaaccatctgagaaacta 43035143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 1287953 - 1287884
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  1287953 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcatt 1287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 11002785 - 11002716
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| | |||||||||| |||||| |||   ||| ||||||||||||||||||||    
T  11002785 agcagagatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacatt 11002716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 21915909 - 21915989
Alignment:
Q  107 tagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    |||||||||||||||| || |||  ||||||||||||||| | |||| | ||| |||| |||||||||||||| |||||||    
T  21915909 tagaaactagacttaggtggtttaagcatgtagagaaaagacttgtgtattatttagttaggagagtagatcatatggagg 21915989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 38578777 - 38578641
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||| |||||| || |||| ||||||| ||| ||| |||||  | ||| |||| || ||| |||||||||| ||||| |||||||||| | ||    
T  38578777 ggtagaaactaaacttaggtggtttgagcatgtaaagagaagacatgtagattatatagttagcagattagatcagatcgaggagagtcaaatcactaga 38578678  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
     | || ||  |||||||||||||||  ||||||||||    
T  38578677 tgtaggggtagacctagaaaaactacaagagaaacta 38578641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 43475320 - 43475360
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  43475320 tgtagtaaggagagtagatcagatggaggatagtcagatca 43475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 8082156 - 8082085
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||||||||||| | |||||||| ||||   |||| || ||| ||||||||||||||||    
T  8082156 tgtagtaaggagagtagatcagatgaacgatagtcagatcaaaagaggtagaggaagacctagaaaaactat 8082085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 27998343 - 27998386
Alignment:
Q  17 cagagatgaggatgttgtgttggatgtgtgttaagactagacaa 60  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  27998343 cagagatgaggatgttgcgttggatgtgtggtaagactagacaa 27998386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 28187030 - 28186963
Alignment:
Q  17 cagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||| ||||||  ||||||||||| |||||||||||| | | | ||||||||||||||||||    
T  28187030 cagagatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacatt 28186963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 41109942 - 41109875
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    ||||||||||| |||||||| |||||||||||||||| ||| | ||||||| ||| ||| ||||||||    
T  41109942 tgtagtaaggatagtagatcggatggaggatagtcaattcactggaggcagaggatgacttagaaaaa 41109875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 79593 - 79675
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||| ||||| ||||||||| |||  ||||   ||||| | ||| |||||||||||||||||||| ||||||    
T  79593 tgtagtaaggagagtcgatcaaatggaggatggtcggatcacaagaggctgaggaagacctagaaaaactatcagataaacta 79675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 7678531 - 7678640
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    ||||||| |||||||||||| |||||  | | |||||||||||||||     |||||||||||||||| |||| | ||||||| ||| || |||| ||||    
T  7678531 tttgggcttgtagagaaaagacatgtagattctgtagtaaggagagt-----agatggaggatagtcagatcactagaggcagaggaagatctagtaaaa 7678625  T
Q  227 ctatcagagaaacta 241  Q
    | || ||||||||||    
T  7678626 ccataagagaaacta 7678640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 1275183 - 1275252
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| | | | ||||| ||||||| ||||    
T  1275183 agcagagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccatt 1275252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 7678402 - 7678467
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| ||||||| ||||  ||||||||| | ||| | ||||||||||||||||||    
T  7678402 gagatgaggatgttgcgttggatctgtggcaagactagataggataggattagaaatgacaacatt 7678467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 10639215 - 10639284
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||  || | ||||| ||||||| ||||    
T  10639215 agcagagatgaggatgttgcgttggatgagtggtaagactagacagaataggattaggaatgacaccatt 10639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 14667683 - 14667740
Alignment:
Q  23 tgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||| ||||||||||||||||| ||||||||||  || | ||||||||||||||||    
T  14667683 tgaggaagttgtgttggatgtgtgataagactagatgaggtagaattagaaatgacaa 14667740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 16134536 - 16134475
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacat 83  Q
    |||||||||||||||||||||| || ||||||||||  ||||  ||||||||||||| ||||    
T  16134536 atgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaatgacgacat 16134475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 36123562 - 36123497
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    ||||||||||| |||||||||||||||||||  ||| |||| ||| ||| |||||| |||||||||    
T  36123562 agcagagatgaagatgttgtgttggatgtgttgtaaaactaaacatgatggaattaaaaatgacaa 36123497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 21093832 - 21093872
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  21093832 tgtagtaaagagagtagatcagatggaggatagtcagatca 21093872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 21952274 - 21952338
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||   ||||||||||||| ||||    
T  21952274 agatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaatgacagcatt 21952338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 28005634 - 28005698
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    |||||||||| ||||||||||| |||||||||||||  |||| | | | ||||||||||||||||    
T  28005634 aggagagtagttcagatggagggtagtcaaatcattataggccgggaaagacctagaaaaactat 28005698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 27799923 - 27799994
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||| ||| ||||||| |||||||||||||  |||| | ||||||| | | ||||||||||||||||    
T  27799923 tgtagtaagaagattagatcatatggaggatagtcggatcactagaggcagagtaagacctagaaaaactat 27799994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 33006582 - 33006649
Alignment:
Q  17 cagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| ||||||||||||||||| ||||||  ||||| ||||| ||||  ||||| |||||||||||||    
T  33006582 cagaaatgaggatgttgtgttgaatgtgttctaagattagacgagataaaattaaaaatgacaacatt 33006649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 34194850 - 34194799
Alignment:
Q  25 aggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatg 76  Q
    |||||||||||||||||||||| ||| |||||||| ||| | ||||||||||    
T  34194850 aggatgttgtgttggatgtgtggtaaaactagacaggataggattagaaatg 34194799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 21093701 - 21093759
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||||| |||| ||||||| ||||||||||   ||| ||||||||||||||||    
T  21093701 atgaggatgttgcgttgtatgtgtggtaagactagatgtgatggaattagaaatgacaa 21093759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 10083102 - 10083034
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||| |||||||||||||  ||| ||||||| |||||||||||  ||| ||||||||||||| ||||||    
T  10083102 agcagggatgaggatgttgctttg-atgtgtggtaagactagacgggatagaattagaaatgagaacatt 10083034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 11675549 - 11675630
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||| || ||||||||||| |||| ||| | |||  | | ||||||||||||||||||||| | |||||||||||| ||||    
T  11675549 cttaggtggtttgggcatgttgagagaaggcctgtagattctgtagtaaggagagtagatcatagggaggatagtcagatca 11675630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 12492751 - 12492682
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||  |||||||| ||| |||||||||||| |||   ||||| ||||||| ||||    
T  12492751 agcagagatgaggatgttacgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 12492682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 15588792 - 15588707
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtca 194  Q
    |||||||| ||||| |||||||||  |||||| | ||| ||  || | | |||| |||||||||||||||||||||||| ||||||    
T  15588792 gaaactaggcttaggtgatttgggtttgtagatagaagacacttggattttgtaataaggagagtagatcagatggagggtagtca 15588707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 16347738 - 16347697
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaa 60  Q
    ||||||||||||||| |||||||| ||| |||||||||||||    
T  16347738 gagatgaggatgttgcgttggatgagtggtaagactagacaa 16347697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 18698891 - 18698952
Alignment:
Q  176 atcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaa 237  Q
    |||||||||||  ||||||||||| | ||||||| |||  ||||||||||||||| ||||||    
T  18698891 atcagatggagagtagtcaaatcactagaggcagaggaatacctagaaaaactataagagaa 18698952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 21193892 - 21193859
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagaga 142  Q
    |||||||||||||| |||||||||||||||||||    
T  21193892 gaaactagacttaggtgatttgggcatgtagaga 21193859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 24178428 - 24178497
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||| ||| | ||||  ||||||| ||||    
T  24178428 agcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccatt 24178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 28977221 - 28977152
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||| ||||||||||||||| ||| ||| |||||| | ||| | ||||| ||||||| ||||    
T  28977221 agcagagatgagtatgttgtgttggatgagtggtaaaactagaaatgataggattaggaatgacaccatt 28977152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 33667242 - 33667279
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagaga 142  Q
    |||||||||||||||||| || ||||||||||||||||    
T  33667242 ggtagaaactagacttaggtggtttgggcatgtagaga 33667279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 34272940 - 34272989
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagatt 64  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||||    
T  34272940 agcagagatgaggatgttgcattggatgagtggtaagactagacaggatt 34272989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 36123448 - 36123411
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagaga 142  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  36123448 ggtagaaactcgacttaggtgatttgggcatgtagaga 36123411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 40938029 - 40938082
Alignment:
Q  185 aggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||||||||| || ||||||| ||| |||||||||||| ||| |||||||    
T  40938029 aggatagtcaaatcgttagaggcagaggaagacctagaaaaaatataagagaaa 40938082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 43558172 - 43558135
Alignment:
Q  21 gatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  43558172 gatgaggatgttgcgttggatgtgtggtaagactagac 43558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 10082995 - 10082923
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagat 177  Q
    |||||||||||||||||  || ||| |||||||||||| ||| | |||| | | |||||||| ||||||||||    
T  10082995 ggtagaaactagacttaagtggtttcggcatgtagagagaagacttgtggattctgtagtaaagagagtagat 10082923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 15588548 - 15588508
Alignment:
Q  201 ttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  15588548 ttgaggcagaggacgacctagaaaaactataagagaaacta 15588508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 15677489 - 15677525
Alignment:
Q  48 taagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  15677489 taagactagacaaaattgaattaaaaatgacaacatt 15677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 43752203 - 43752067
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||| ||| ||||| |||||||| |||||||||| ||| | | |  | ||||||||| |||||||||||||||||||||||| ||| |||| | ||    
T  43752203 ggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggagagtagatcagatggaggatactcagatcactgga 43752104  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||  ||| |||||||||||||||||||||||||||    
T  43752103 ggcataggaagacctagaaaaactatcagagaaacta 43752067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 18958991 - 18959073
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||||| ||| |||||||||||||||  ||||||||||    
T  18958991 tgtagtaaggagagtagatcagatggaggatagtcagatcatcagaggcagaggaagacctagaaaaactacaagagaaacta 18959073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 43832128 - 43832260
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||| ||||| ||||||||||||||| ||| ||  |||||| | |||||||| |||||||||||||||||||||  || |||||||| | || |||    
T  43832128 gaaactaggcttaggtgatttgggcatgtacagagaaaacatgtggattatgtagttaggagagtagatcagatggagagtaatcaaatcagtagacgca 43832227  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| |||||| | ||||||| ||||||||||    
T  43832228 gaggaagacctaaacaaactataagagaaacta 43832260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 26784592 - 26784460
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||| ||||| |  |||| |||| |||||| |||  ||||| | | |||||||||||| |||||| ||||||||| ||||||||||| | ||||||    
T  26784592 gaaactaggcttaggttgtttgtgcatttagagagaagatatgtggattttgtagtaaggagggtagataagatggagggtagtcaaatcactagaggca 26784493  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | | | |||||||||||||||| ||||||||||    
T  26784492 gagaaagacctagaaaaactataagagaaacta 26784460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 42543263 - 42543397
Alignment:
Q  107 tagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgagg 206  Q
    ||||||||| |||||| || |||||||||||| ||| ||| | |||| | | |||||| |||||||||||||| |||||||  ||||| |||| | ||||    
T  42543263 tagaaactaaacttaggtggtttgggcatgtacagagaagacctgtggattctgtagttaggagagtagatcaaatggaggggagtcagatcactagagg 42543362  T
Q  207 cagtggaggacctagaaaaactatcagagaaacta 241  Q
     || ||  |||||||||||||||| ||||||||||    
T  42543363 taggggtagacctagaaaaactataagagaaacta 42543397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 38435034 - 38435114
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||| |||||||||||||| |||| | ||||||| ||  |||||||||||||||  ||||||||||    
T  38435034 tagtaaggagagtagatcatatggaggatagtcagatcactagaggcagaggtagacctagaaaaactacaagagaaacta 38435114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 19235186 - 19235104
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||| ||||||||||||||||||||  |||||||||| | |||  || ||| |||||||||||||||| ||||||||||    
T  19235186 tgtagtaaagagagtagatcagatggaggggagtcaaatcactagagatagaggaagacctagaaaaactataagagaaacta 19235104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 8180698 - 8180767
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  8180698 agcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 8180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 45077670 - 45077727
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatg 76  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||    
T  45077670 gagatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 26850313 - 26850393
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaa 237  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |  |||||| | |  |||||||||| |||| ||||||    
T  26850313 tatgtagtaaggagactagatcagatggaggatagtcaaatcactaaaggcagagaaaaacctagaaaatctataagagaa 26850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 37481865 - 37481737
Alignment:
Q  113 ctagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtgg 212  Q
    |||| ||||| || |||| ||||||||||| ||| | |||||| | |||||| ||||||||||||||||||||||  ||| | |||| | |||| ||  |    
T  37481865 ctaggcttaggtggtttgagcatgtagagagaagacttgtgaattttgtagttaggagagtagatcagatggaggggagttagatcactggaggtagatg 37481766  T
Q  213 aggacctagaaaaactatcagagaaacta 241  Q
    | |||| ||||||||||| ||||||||||    
T  37481765 aagaccaagaaaaactattagagaaacta 37481737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 45077835 - 45077881
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgag 205  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  45077835 tgtagtaaggagagtagatcagatggaggatagtcagatcacttgag 45077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 23714513 - 23714384
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||  |  ||| |||||||||||| ||| | |||| | ||||||||||||||||||||||| |||| ||  |||||||||| | || | |    
T  23714513 gaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactagacgta 23714414  T
Q  209 gtggaggacctagaaaaactatcagagaaa 238  Q
    |  || ||| |||||||||||| |||||||    
T  23714413 gatgaagacttagaaaaactataagagaaa 23714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 23714622 - 23714553
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||| || | |||| ||||||| |||||    
T  23714622 agcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacatt 23714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 24102185 - 24102056
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||  |  ||| |||||||||||| ||| | |||| | ||||||||||||||||||||||| |||| ||  |||||||||| | || | |    
T  24102185 gaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactagacgta 24102086  T
Q  209 gtggaggacctagaaaaactatcagagaaa 238  Q
    |  || ||| |||||||||||| |||||||    
T  24102085 gatgaagacttagaaaaactataagagaaa 24102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 24102294 - 24102225
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||| || | |||| ||||||| |||||    
T  24102294 agcagagattagaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacatt 24102225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 33504312 - 33504385
Alignment:
Q  168 gagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||| |||||| |||| | ||||||| | |  ||||||||||||||| ||||||||||    
T  33504312 gagagtagatcagatggagggtagtcagatcactagaggcagagaaaaacctagaaaaactataagagaaacta 33504385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 36869936 - 36870021
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaactaa 242  Q
    |||| ||||||||||||| || ||||||||||||| ||| ||| | ||||||  ||| || ||||||||||||| |||||||||||    
T  36869936 tatgcagtaaggagagtaaattagatggaggatagacaattcactagaggcataggaagagctagaaaaactataagagaaactaa 36870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 12141626 - 12141706
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||| |||||||||||||| |   |||| || ||| ||||||||||| ||||  |||||||||    
T  12141626 tagtaaggagagtagatcagattgaggatagtcaaattacaagaggtagaggaagacctagaaaagctataggagaaacta 12141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 36183369 - 36183433
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgaca 79  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| |||||||    
T  36183369 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 36183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 43260436 - 43260524
Alignment:
Q  111 aactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||| ||||| || |||||||||||  ||||||| | |||  | | | ||||||||||||||||||||||||||| |||||||||||    
T  43260436 aactaggcttaggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatggagggtagtcaaatca 43260524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 44437977 - 44437841
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||| ||| || ||| |||||||||||| ||| | |||| | | |||| |||||||  ||||| |||||||||  ||||| |||| | ||    
T  44437977 ggtagaaactagacataggtggtttcggcatgtagagagaagacttgtggattctgtaataaggagtatagatgagatggaggggagtcagatcactaga 44437878  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||  ||||||||||||||||  |||||||||    
T  44437877 ggtaggggtagacctagaaaaactatatgagaaacta 44437841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 9647969 - 9647927
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactaga 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  9647969 agcagagatgaggatgttgcgttggatgtgtggtaagactaga 9647927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 42092543 - 42092633
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaa 195  Q
    |||||||||||   |||| |||| |||||||||||||| ||| | |||  | | ||||||||||||||||||| ||||||||| |||||||    
T  42092543 ggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagggtagtcaa 42092633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 3865990 - 3866059
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  3865990 agcagagatgatgatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 3866059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 9556724 - 9556663
Alignment:
Q  23 tgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||| ||||| |||||  |||   ||||||||||||||||||    
T  9556724 tgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacatt 9556663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 12734623 - 12734688
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||| |||||| ||| |||||||||||  ||| | ||||||||||||| ||||    
T  12734623 gagatgaggatgttgtgctggatgagtggtaagactagacgggataggattagaaatgacaccatt 12734688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 38429806 - 38429871
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  38429806 gagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 38429871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 41763401 - 41763336
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| | |||||| ||| |||||||||||||||| | ||||| ||||||| ||||    
T  41763401 gagatgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccatt 41763336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 7825276 - 7825340
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgaca 79  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||  |||   |||||||||||||    
T  7825276 agcagagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgaca 7825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 7825399 - 7825475
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtca 194  Q
    |||||||| |||| ||||||||||| ||| |||||  | | | |||| |||||||||||| ||||||||||||||||    
T  7825399 cttagttggtttgagcatgtagagagaagacatgtagattctatagtcaggagagtagatgagatggaggatagtca 7825475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 9556621 - 9556489
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||| ||| ||||| || ||| |||||||||||| ||| || ||  | | ||||||||| | |||| |||||||||||||||||||||  | | ||||||    
T  9556621 gaaaataggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggatagtcaaactactagaggca 9556522  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
      ||| ||||| |||||||||| ||| ||||||    
T  9556521 aaggaagaccttgaaaaactataagataaacta 9556489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 42149848 - 42149808
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  42149848 tgtagtaaggagagtagatcagatgcaggatagccaaatca 42149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 3481221 - 3481256
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtca 194  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3481221 tgtagcaaggagagtagatcagatggaggatagtca 3481256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 5759189 - 5759115
Alignment:
Q  167 ggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||  | |||||||| | |||| || | |  ||||||||||||||| ||||||||||    
T  5759189 ggagagtagatcagatggaggggaatcaaatcactagaggtagggaaatacctagaaaaactattagagaaacta 5759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 13240997 - 13240927
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatca 179  Q
    |||||||| ||||| || |||||||||||||||| ||| |||||  | | | |||||||||||||||||||    
T  13240997 gaaactaggcttaggtggtttgggcatgtagagagaagacatgtagattctttagtaaggagagtagatca 13240927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 33287495 - 33287529
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatag 191  Q
    |||||||||||| ||||||||||||||||||||||    
T  33287495 tatgtagtaaggggagtagatcagatggaggatag 33287529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 45436922 - 45437000
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaa 237  Q
    |||| ||||||||||||||||| | ||||||| ||| |||| | ||||||| ||| |||||| ||||| ||| ||||||    
T  45436922 tgtattaaggagagtagatcagtttgaggataatcagatcactagaggcagaggaagacctataaaaattataagagaa 45437000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 2610446 - 2610515
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||| || |||||||| ||| |||||||||||| ||  | ||||| ||||||| ||||    
T  2610446 agcagagatgaggatgctgcgttggatgagtggtaagactagacaggacaggattaggaatgacaccatt 2610515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 4598928 - 4598859
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||| ||||||| |||||||||||| |||||||||||  ||| |||||  ||||||| |||||    
T  4598928 agcagaaatgatgatgttgcgttggatgtgtggtaagactagacgggatagaattcaaaatgacgacatt 4598859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 14197358 - 14197289
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||| ||||||||||  ||||||||||| | ||||||  ||| ||| | ||||||||||    
T  14197358 tagtaaggagagtaggtcagatggagagtagtcaaatcactagaggcaaaggaagacttggaaaaactat 14197289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 32365116 - 32365035
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctag-aaaaactatcagagaaac 239  Q
    |||| |||| ||||||||||| |||||||||||||| |||| | || |||| ||| |||| || ||||||||||||| ||||    
T  32365116 tgtaataagaagagtagatcaaatggaggatagtcagatcactagaagcagaggaagaccaagaaaaaactatcagaaaaac 32365035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 38453053 - 38452984
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||  || | ||||| ||||||| ||||    
T  38453053 agcagacatgaggatgttgcgttggatgagtggtaagactagacatcataggattaggaatgacaccatt 38452984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 1456155 - 1456191
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagacta 55  Q
    |||||||||||||||||||||||||||| || |||||    
T  1456155 gagatgaggatgttgtgttggatgtgtgctaggacta 1456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 12026257 - 12026125
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||| ||||| || ||||  |||||||||| ||| | |||  | | |||| ||||||||||||||||||||| || |||||| |||| | |||||     
T  12026257 gaaactaggcttaggtggtttgaccatgtagagagaagacctgtagattttgtactaaggagagtagatcagatggtgggtagtcacatcactggaggcg 12026158  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    |   | |||||||| |||||||  |||||||||    
T  12026157 gattaagacctagagaaactataggagaaacta 12026125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 18188706 - 18188769
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||||||||| |||| ||||||  |||   || |||||||||||||||    
T  18188706 agatgaggatgttgtgttggatgtgtg-taaggctagacgggatatgatcagaaatgacaacatt 18188769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 37470337 - 37470253
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||| |||||||||||||| ||||||| | |||||| |||| | | || || ||| |||||  ||||||||| ||||||||||    
T  37470337 tatgtattaaggagagtagattagatggaaggtagtcagatcactagtggtagaggaagacctgaaaaaactataagagaaacta 37470253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 38860256 - 38860296
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaat 197  Q
    ||||||| ||||||||||||| ||||||||| |||||||||    
T  38860256 tatgtaggaaggagagtagatgagatggagggtagtcaaat 38860296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 32931041 - 32931123
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||| |||||||||||||||||||||| |||| | ||||||| ||| |||||| ||||||||||||||||||||    
T  32931041 tgtagtaaggagactagatcagatggaggatagtcatatcactagaggcagaggaagacctaaaaaaactatcagagaaacta 32931123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 38178462 - 38178380
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||| || ||| |||||||||||||||| ||||||||||    
T  38178462 tgtagtaaggagagtagatcagatggaggatagtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaacta 38178380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 29520698 - 29520810
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    |||||||||||||||| ||| | |||  | | |||||||||||||||||||||||||||||||||||||||||   |||| || ||| | ||||||||||    
T  29520698 tttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggtagaggaag-cctagaaaaa 29520796  T
Q  227 ctatcagagaaact 240  Q
    |||| |||||||||    
T  29520797 ctataagagaaact 29520810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 29700315 - 29700439
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggac 217  Q
    ||||| || ||||||||| |||||||||| |   || | | ||||||||||||||||||| |||||||||||||||| |||| | |||| || ||| |||    
T  29700315 cttaggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatggaggatagtcatatcactagaggtagaggaagac 29700414  T
Q  218 ctagaaaaactatcagagaaactaa 242  Q
    ||||||||||||  |||||||||||    
T  29700415 ctagaaaaactaaaagagaaactaa 29700439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 32043616 - 32043752
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||| | || ||||| |||||||||| ||| | |||| |   ||||||||||||| |||||||||||||||   ||||||||| | ||    
T  32043616 ggtagaaactagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggaggggtgtcaaatcactaga 32043715  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||| ||||||||| ||||||||||    
T  32043716 ggtaggggaagacctaaaaaaactattagagaaacta 32043752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 16351405 - 16351540
Alignment:
Q  106 gtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgag 205  Q
    ||||||||||||||| | || ||| |||||||||||| ||  | | || |  ||||||||||||||||||||||||||||||  |||||| ||| |||||    
T  16351405 gtagaaactagacttgggtggtttaggcatgtagagagaaaacttttggatcatgtagtaaggagagtagatcagatggaggggagtcaagtcacttgag 16351504  T
Q  206 gcagtggaggacctagaaaaactatcagagaaacta 241  Q
      ||  || |||||||||||||||| ||||||||||    
T  16351505 ataggagaagacctagaaaaactattagagaaacta 16351540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 35362852 - 35362770
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| ||||||||||||||| ||||||||||||||||||  |  |||||| ||| ||||||||||||||||| |||||||||    
T  35362852 tgtagcaaggagagtagatcaaatggaggatagtcaaatccctataggcagaggaagacctagaaaaactatcggagaaacta 35362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 5908678 - 5908808
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    ||||||||||||||||| |||||  || |||||| ||| | |||  | | |||||||||||||||||||||| |||||||| |||| |||| | ||| ||    
T  5908678 gaaactagacttagttggtttgg--atatagagagaagacctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagagaca 5908775  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
      ||| |||||||||||||||| ||||||||||    
T  5908776 taggaagacctagaaaaactataagagaaacta 5908808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 45512696 - 45512615
Alignment:
Q  160 gtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||| ||||||||| ||||||  ||||||||||||| | ||||||| ||| |||||||||||||||| ||||||||||    
T  45512696 gtagtaagcagagtagattagatggcagatagtcaaatcactagaggcagaggaagacctagaaaaactataagagaaacta 45512615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 25985545 - 25985668
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||||||||   |||||| ||||||| |||| ||| |||||||| | || |||||||||| ||||||||||| |||  |||||||||| | ||    
T  25985545 ggtagaaactagacttgcgtgattttggcatgt-gagagaagacatgtgaattttgaagtaaggagactagatcagatgtaggggagtcaaatcactaga 25985643  T
Q  205 ggcagtggaggacctagaaaaacta 229  Q
    || || ||| |||||||||||||||    
T  25985644 ggtagaggaagacctagaaaaacta 25985668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 36545065 - 36545134
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  36545065 agcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 36545134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 39760788 - 39760719
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||||||| || || |||||||||| | | ||||||||| ||||||    
T  39760788 agcagagatgaggatgttgtgttggatgtgtggtaggattagacaagataggagtagaaatgataacatt 39760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 45331772 - 45331699
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||||||||||||||||| |  |||||||| | ||||||| |||  |||||||||||||||    
T  45331772 tatgtagtaaggagagtagatcagatggagggtcatcaaatcaatcgaggcagaggaaaacctagaaaaactat 45331699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 39051065 - 39051125
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||||||||||| |||||||| |||||| ||||| ||| ||||||||||||||||    
T  39051065 agatgaggatgttgtgttagatgtgtggtaagacaagacatgatagaattagaaatgacaa 39051125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 25985854 - 25985776
Alignment:
Q  106 gtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatgga 185  Q
    |||||||||||||||| ||| |||| |||| |||||| ||| | |||||| | |||||||||||||||||||||||||||    
T  25985854 gtagaaactagactta-ttggtttgtgcatttagagagaagacctgtgaattttgtagtaaggagagtagatcagatgga 25985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 7531858 - 7531764
Alignment:
Q  147 tcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||| | |||||||||||||||||||||||||||||||  ||||| |||| | |||| |  ||  ||||||||||||||||  |||||||||    
T  7531858 tcatgtggattatgtagtaaggagagtagatcagatggaggggagtcagatcactagaggtaagggtagacctagaaaaactatacgagaaacta 7531764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 16252860 - 16252922
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||||||| ||||| ||||  ||||  |||||||||||||||||||    
T  16252860 atgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacatt 16252922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 10080141 - 10080028
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    |||||||||||||||| ||| | || | | | ||||||||||||||||||||| ||| |||  |||||||||| | |||| || ||| |||||||| |||    
T  10080141 tttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggggagtcaaatcactagaggtagaggaagacctagagaaa 10080042  T
Q  227 ctatcagagaaact 240  Q
    |||| ||| |||||    
T  10080041 ctataagaaaaact 10080028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 16917215 - 16917303
Alignment:
Q  110 aaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||| ||||| || |||||||||||| ||| ||| | |||  | | |||||||||||||||||||||||| ||||||||||||||||    
T  16917215 aaactaggcttaggtggtttgggcatgtaaagagaaggcttgtagatt-tgtagtaaggagagtagatcagattgaggatagtcaaatca 16917303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36395314 - 36395245
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  36395314 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36395245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 38409226 - 38409153
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||| |||||||||||||||||||||||| ||||||| || | |||| || ||  ||||||||||||||||    
T  38409226 tatgtagcaaggagagtagatcagatggaggagagtcaaaccactggaggtaggggtagacctagaaaaactat 38409153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 28300471 - 28300407
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||||||||  ||||||||||  ||||   ||||||||||||||||||    
T  28300471 agatgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaatgacaacatt 28300407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 35914797 - 35914721
Alignment:
Q  165 aaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||| |||||||||||||||||| |||  | ||| ||| ||| ||| |||||||||||| ||||||||||    
T  35914797 aaggagagtaggtcagatggaggatagtcagatccctagagacagaggaagacatagaaaaactataagagaaacta 35914721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 32043522 - 32043577
Alignment:
Q  29 tgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||| |||||||||||| |||||||||||  ||| ||||||||||||||||||||    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacatt 32043577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 37826374 - 37826453
Alignment:
Q  162 agtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||| ||||||||||||| ||  ||||||||||| | ||||||| ||  |||||||| ||||||| ||||||||||    
T  37826374 agtaaggaaagtagatcagatgaagagtagtcaaatcactagaggcagagggagacctagataaactataagagaaacta 37826453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 39051190 - 39051273
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagt 210  Q
    |||||| |||||||||||||||||||  | | || ||| ||||||||| |||||||||||  ||||||||||| | ||||||||    
T  39051190 tttgggtatgtagagaaaagtcatgtagattttgcagtgaggagagtaaatcagatggagagtagtcaaatcactagaggcagt 39051273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 11733827 - 11733909
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||  ||||||||||||| |||| | ||| ||  || ||||||||||| ||||  ||||||||||    
T  11733827 tgtagtaaggagagtagatcacgtggaggatagtcagatcactagagacaaaggtggacctagaaatactacaagagaaacta 11733909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 15215631 - 15215566
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||| |||||| ||| |||||||| ||| ||| | ||||||||||||| ||||    
T  15215631 gagatgaggatgttgtgctggatgagtggtaagactatacaggataggattagaaatgacaccatt 15215566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 30748377 - 30748446
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||||||||||  |||||||||||| | ||| |||||| ||| | ||||||||||||||||||    
T  30748377 agcagatatgaggatgtttcgttggatgtgtggttagattagacatgataggattagaaatgacaacatt 30748446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36565605 - 36565536
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||| || |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  36565605 agcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 39946775 - 39946844
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  39946775 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatt 39946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 42493668 - 42493599
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||||||||||||| ||||| |||||| ||||| ||| |||||||| |||  |||||||||||||    
T  42493668 agcaaagatgaggatgttgcgttggttgtgtggtaagattagtcaagattggattgtaaatgacaacatt 42493599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 7046414 - 7046453
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  7046414 tgtagtaaggagagtagatcag-tggaggatagtcaaatca 7046453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 24558567 - 24558607
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  24558567 tgtagtaagaatagtagatcagatggaggatagtcaaatca 24558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 30559723 - 30559807
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtc 193  Q
    |||| ||| ||||| || ||||||||| |||||| ||| |||||  | | ||||||||||| ||| |||||||||||||||||||    
T  30559723 gaaaataggcttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatggaggatagtc 30559807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 36069570 - 36069630
Alignment:
Q  24 gaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||||| |||||||||||  |||   |||||||| |||||||||    
T  36069570 gaggatgttgtgttggatgtgtggtaagactagacgggataagattagaaacgacaacatt 36069630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 39953520 - 39953384
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||||| |||| || ||| ||||||||||||   | | | || | ||||||||||||||||||||||||||| |||  | ||| |||| | ||    
T  39953520 ggtagaaactagatttaggtggtttaggcatgtagagaggtgacctatggattatgtagtaaggagagtagatcagatgaaggcgaatcagatcactaga 39953421  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||  ||||||| |||||||  ||||||||||    
T  39953420 ggtaggggtagacctaggaaaactaaaagagaaacta 39953384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 40813240 - 40813284
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||    
T  40813240 agcagagattaggatgttgtgttggatgagtggtaagactagaca 40813284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 41971974 - 41971910
Alignment:
Q  165 aaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaacta 229  Q
    |||||||||||||||| |||| ||||||||||||| | ||||||  |||  ||||||||||||||    
T  41971974 aaggagagtagatcaggtggacgatagtcaaatcactagaggcaaaggaaaacctagaaaaacta 41971910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 43904867 - 43904787
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    ||||||||| ||| ||||||||||||||||||||||||| |   |||| |  ||| |||||||||| ||||| ||||||||    
T  43904867 tgtagtaagaagaatagatcagatggaggatagtcaaattacaagaggtacaggaagacctagaaatactataagagaaac 43904787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 45419325 - 45419397
Alignment:
Q  169 agagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||| ||||| |||    |||| || ||| |||||||||||||||| ||||||||||    
T  45419325 agagtagatcagatggaggagagtcagatctgaagaggtagaggaagacctagaaaaactataagagaaacta 45419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 30198468 - 30198389
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||| |||||||||||||||| ||||||||||   || | ||||||| ||  ||| |||||||||||| |||||||    
T  30198468 tgtagtaacgagagtagatcagatgaaggatagtcagtacactagaggcagaggtagacttagaaaaactataagagaaa 30198389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 35643813 - 35643729
Alignment:
Q  158 atgtagtaaggagagtagatca----gatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||||||||| |||||||    | ||||||||||||| || | | ||||||| ||| |||||||||||||||| |||||||    
T  35643813 atgtagtaaggagaatagatcaatcagctggaggatagtcagattactagaggcagaggaagacctagaaaaactataagagaaa 35643729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 36143287 - 36143346
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaa 74  Q
    |||||||||||||||||||||||||  ||||| ||||||||||  |||| | ||||||||    
T  36143287 agcagagatgaggatgttgtgttggtcgtgtggtaagactagatgagataggattagaaa 36143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 39967684 - 39967619
Alignment:
Q  170 gagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||| ||||     || ||| |||||||||||||| ||||||||||    
T  39967684 gagtagatcagatggaggatagtcaaatcacttga-----tgtagg-cctagaaaaactataagagaaacta 39967619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30456575 - 30456537
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagac 53  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  30456575 agcagagatgaggatgttgcgttggatgtgtggtaagac 30456537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 30783271 - 30783162
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    ||||||| |||||||||||| |||||  | | |||||||| ||||||||||     |||||||||||| |||| | ||||||| ||| || |||| ||||    
T  30783271 tttgggcttgtagagaaaagacatgtagattttgtagtaaagagagtagat-----ggaggatagtcagatcactagaggcagaggaagatctagtaaaa 30783177  T
Q  227 ctatcagagaaacta 241  Q
    | || ||||||||||    
T  30783176 ccataagagaaacta 30783162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 44681435 - 44681397
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  44681435 agatgaggatgttgtattggatgtgtggtaagactagac 44681397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 12492206 - 12492137
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||||||||||| |||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  12492206 agcagatatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatt 12492137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 12692402 - 12692353
Alignment:
Q  203 gaggcagtggaggacctagaaaaactatcagagaaactaactattaagaa 252  Q
    ||||||| ||| || ||||||||||| | |||||||||||||||||||||    
T  12692402 gaggcagaggaagagctagaaaaactgtaagagaaactaactattaagaa 12692353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 16351312 - 16351377
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| ||||||| ||||||| |||| |||||||||||   || || |||||||||||||||||    
T  16351312 gagatgaagatgttgcgttggatatgtggtaagactagacggaatagagttagaaatgacaacatt 16351377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 29520583 - 29520640
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatga 77  Q
    |||||||||||||| |||||||||||| ||||||||||   ||| | |||||||||||    
T  29520583 agatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatga 29520640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30783400 - 30783335
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||| ||||||| ||||  ||||||||| | ||| | ||||||||||||||||||    
T  30783400 gagatgaggatcttgcgttggatctgtggcaagactagataggataggattagaaatgacaacatt 30783335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 10080264 - 10080200
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| ||||||| ||||| ||| || ||||||||||| ||||   ||||||||||||||||||    
T  10080264 agatgatgatgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacatt 10080200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 16705697 - 16705749
Alignment:
Q  32 tgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||| |||||| ||||||||||   ||| ||||||||||||||||||||    
T  16705697 tgtgttggttgtgtggtaagactagatgggatagaattagaaatgacaacatt 16705749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 18742222 - 18742143
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||| ||||||| |||||||| ||   | ||||||| ||  |||||| ||||||||| ||||||||||    
T  18742222 tagtaaggagagtagataagatggaagatagtcagattgctagaggcagaggtagaccta-aaaaactataagagaaacta 18742143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 18747186 - 18747107
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||| ||||||| |||||||| ||   | ||||||| ||  |||||| ||||||||| ||||||||||    
T  18747186 tagtaaggagagtagataagatggaagatagtcagattgctagaggcagaggtagaccta-aaaaactataagagaaacta 18747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 33828116 - 33828052
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||| |  ||| |||||| |||||   | ||||||||||||||||    
T  33828116 agatgaggatgttgtgttggatgtctagtaaaactagataagataagactagaaatgacaacatt 33828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 39953628 - 39953568
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaat 75  Q
    |||||||||||| |||||| |||||||||||| ||||| || ||| |||  ||||||||||    
T  39953628 agcagagatgagaatgttgcgttggatgtgtggtaagattaaacatgatataattagaaat 39953568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 44681382 - 44681334
Alignment:
Q  36 ttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||||||| ||||   ||||||||||||||||||    
T  44681382 ttggatgtgtggtaagactagacgagataagattagaaatgacaacatt 44681334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 21945840 - 21945758
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||| | ||| |||||||||||||||||| ||||||||    
T  21945840 tgtagtaaggagagtagatcagatggaggatagtcacatcactagaggctgaggaagacctagaaaaactatcatagaaacta 21945758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 34233228 - 34233144
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||| ||||||||||| |||| |||| | ||||||| |||  ||||||||||||||||||||||||||    
T  34233228 tatgtagtaaggagagtagatgagatggaggatcgtcagatcactagaggcagaggaaaacctagaaaaactatcagagaaacta 34233144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 26356645 - 26356780
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||| ||||||||| || ||||||||  |||||| ||| ||||||     |||||||||||||||||||| ||||||||  |||||||||| | ||    
T  26356645 ggtagaaaatagacttaggtggtttgggcacttagagagaagacatgtgggtattgtagtaaggagagtagatcggatggaggggagtcaaatcactaga 26356744  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaact 240  Q
    || || ||| |||||||||||||||| |||||||||    
T  26356745 ggtaggggaagacctagaaaaactataagagaaact 26356780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 10209063 - 10209198
Alignment:
Q  108 agaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggc 207  Q
    |||||||| ||||||||| ||||||||||||| || ||| | |||||| | | |||||||||||||||||||||||||||| ||||| || | | | ||     
T  10209063 agaaactaaacttagttggtttgggcatgtagcgagaagacctgtgaattttttagtaaggagagtagatcagatggaggagagtcatatgactagtggt 10209162  T
Q  208 agtggag--gacctagaaaaactatcagagaaacta 241  Q
    || || |  |||||||||||||||| ||||||||||    
T  10209163 agggggggagacctagaaaaactataagagaaacta 10209198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 54470237 - 54470365
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||  || |||||||||||||||| ||| ||||| || |||||||||||||||||| |||| ||||||  ||||||||| | | ||||||    
T  54470237 gaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaaatggagagtagtcaaattactagaggca 54470336  T
Q  209 gtggaggacctagaaaaactatcagagaa 237  Q
       || |||| ||||||||||| ||||||    
T  54470337 aaagaagaccaagaaaaactataagagaa 54470365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 45423542 - 45423606
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||| |||||| |||||||||||  ||| ||||||||||||||||||||    
T  45423542 agatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaacatt 45423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 46372051 - 46372186
Alignment:
Q  106 gtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgag 205  Q
    ||||||||||||||||| || |||| ||||||||||| ||| |||||| | | |||| |||| |||| ||||||||| ||||  || || |||| | |||    
T  46372051 gtagaaactagacttaggtggtttgtgcatgtagagagaagacatgtggattctgtactaagaagagcagatcagatagaggggagccagatcactagag 46372150  T
Q  206 gcagtggaggacctagaaaaactatcagagaaacta 241  Q
    | || ||  |||||||||||||||| ||||||||||    
T  46372151 gtaggggtagacctagaaaaactataagagaaacta 46372186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 28351639 - 28351721
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||||||| || |   |||| || | | |||||||||||||||| ||||||||||    
T  28351639 tgtagtaaggagagtagatcagatggaggatagtcagattacaagaggtagagaaagacctagaaaaactataagagaaacta 28351721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 21107069 - 21107154
Alignment:
Q  157 tatgtagtaaggagagtagatca-gatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||| | || |||| ||| |||||||||||||||| ||||||||||    
T  21107069 tatgtagtaaggagagtggatcaagatggagggtagtcagatcactggatgcagcggaagacctagaaaaactataagagaaacta 21107154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 25257943 - 25257874
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||||||  |||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||    
T  25257943 agcaaagatgagcttgttgtgttggatgtgtagtaagactagacatgatagaattagaaatgacaacatt 25257874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 31961515 - 31961386
Alignment:
Q  112 actagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtg 211  Q
    ||||||||| | || |||||||||||||||| ||| | |||| | | |||||| |||||||| ||| ||||||||   |||||||||| | |||| || |    
T  31961515 actagacttgggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggagaggagtcaaatcactagaggtaggg 31961416  T
Q  212 gaggacctagaaaaactatcagagaaacta 241  Q
    |  |||||||||||||||| ||||||||||    
T  31961415 gtagacctagaaaaactataagagaaacta 31961386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 49987346 - 49987415
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||| |||| |  |||||||||||| ||| | ||||||||||||||||||    
T  49987346 agcagagatgaggatgttgtgttgaatgtttagtaagactagacatgataggattagaaatgacaacatt 49987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 28497528 - 28497600
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggata 190  Q
    ||||| || |||||||||||||||| ||| | |||  | ||||||||||||||||||||||||||||||||||    
T  28497528 cttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcagatggaggata 28497600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 31897684 - 31897548
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||| | || |||| |||||||||||  || | |||| | | |||||| |||||||| ||| |||||||||  ||||| |||| | ||    
T  31897684 ggtagaaactagacttgggtggtttgcgcatgtagagagcagacctgtggattctgtagttaggagagtcgattagatggaggggagtcagatcactaga 31897585  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||  |||||||||||||||| ||||||||||    
T  31897584 ggtaggggtagacctagaaaaactataagagaaacta 31897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 35555903 - 35555767
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| || ||||||||| |||||| ||| | |||| | | |||||| |||||||||||| |||| ||||| |||    ||| | ||    
T  35555903 ggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagattagatagaggagagttgggtcactaga 35555804  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||  |||||||||||||||| ||||||||||    
T  35555803 ggtaggggtagacctagaaaaactataagagaaacta 35555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 21106908 - 21106971
Alignment:
Q  21 gatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||| ||| |||||||| |||||||||||  ||| ||||||||||||||||||||    
T  21106908 gatgaggatgttgggttcgatgtgtggtaagactagacgtgatagaattagaaatgacaacatt 21106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 25257837 - 25257711
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||| |||||||||| || |||| ||||||||||| ||| | ||||||   ||| |||||||||||||||||||||||||  |  ||||||| | ||    
T  25257837 ggtagaagctagacttaggtggtttgagcatgtagagagaagacctgtgaatgctgttgtaaggagagtagatcagatggaggggacacaaatcactaga 25257738  T
Q  205 ggcagtggaggacctagaaaaactatca 232  Q
    || || ||| |||||| |||||||||||    
T  25257737 ggtaggggaagaccta-aaaaactatca 25257711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 2589016 - 2589098
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    |||||||||||||||||| || ||| |||||||||||| ||  | |||| | | |||||| ||||||||||||||||||||||    
T  2589016 ggtagaaactagacttaggtggtttaggcatgtagagagaaaacttgtggattctgtagttaggagagtagatcagatggagg 2589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 13805467 - 13805385
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| ||||||| ||||||| ||||||||| |||| |||| | ||||||| |||  ||||||||||||||| ||||||||||    
T  13805467 tgtagcaaggagactagatcacatggaggattgtcagatcactagaggcagaggaaaacctagaaaaactataagagaaacta 13805385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 45094522 - 45094464
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatga 77  Q
    |||||||||||||||||||||||||||  ||| |||||||||||| | |||||||||||    
T  45094522 gagatgaggatgttgtgttggatgtgtagtaatactagacaagatagtattagaaatga 45094464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 46715624 - 46715546
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    |||||||| ||||| || | |||||||||||||| ||| |||||| | ||||||| ||||||||||||||| |||||||    
T  46715624 gaaactaggcttaggtggtgtgggcatgtagagagaagacatgtggattatgtagcaaggagagtagatcatatggagg 46715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 12494668 - 12494737
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  12494668 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 12494737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 23906665 - 23906596
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| |||  ||||||||||||||| | ||||| ||||||| ||||    
T  23906665 agcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccatt 23906596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 29398898 - 29398967
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaact 228  Q
    |||||| ||||||||||| | ||| |||||||||||||||| | ||||||| ||| ||||||||||||||    
T  29398898 tgtagtgaggagagtagaccggatagaggatagtcaaatcactagaggcagaggaagacctagaaaaact 29398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 31960178 - 31960109
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  31960178 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 31960109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 43070128 - 43070059
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||  |||||| |||||||||||| ||||| |||||| ||| | ||||||||||||||||||    
T  43070128 agcagagatgatcatgttgggttggatgtgtggtaagattagacaggataggattagaaatgacaacatt 43070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 43433836 - 43433905
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| |||  ||||||||||||||| | ||||| ||||||| ||||    
T  43433836 agcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccatt 43433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 47147451 - 47147524
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    |||||||||||||||||| |||||||||||  |||||  |||| | ||||||| ||| ||||||||||||||||    
T  47147451 tatgtagtaaggagagtaaatcagatggagagtagtcggatcactagaggcagaggaagacctagaaaaactat 47147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 56375208 - 56375277
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||   ||||| ||||||| ||||    
T  56375208 agcagagatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccatt 56375277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 25967461 - 25967381
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||||| |||||||| |||||| | ||| ||| ||| ||| | ||| |||||| ||||||||||    
T  25967461 tagtaaggagagtagatcagatgaaggatagttaaatcactagagacagaggaagactttgaataactataagagaaacta 25967381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 2588905 - 2588968
Alignment:
Q  21 gatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||| |||||||||||| ||||||||||   ||| | ||||||||||||||||||    
T  2588905 gatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacatt 2588968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 18499791 - 18499854
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgac 78  Q
    |||||| |||| |||||||||||||||||||| ||||||||||| |||| ||| || |||||||    
T  18499791 agcagaaatgaagatgttgtgttggatgtgtgataagactagacgagatagaactaaaaatgac 18499854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 44360113 - 44360247
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||||| |  |||| |||||||||||||||| ||| |||||| || |||||||||||| | ||||||| |||||||  || ||||||| | |     
T  44360113 ggtagaaactagattaggttg-tttgggcatgtagagagaagacatgtggacgatgtagtaaggataatagatcatatggaggggaggcaaatcactagt 44360211  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaact 240  Q
    | | |  || ||| |||||||||||| |||||||||    
T  44360212 gcctggagaagacttagaaaaactattagagaaact 44360247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 18966474 - 18966540
Alignment:
Q  18 agagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||| ||||||| |||||||||||| ||||| ||||||| || | |||| |||||||||||||    
T  18966474 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 18966540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 41366437 - 41366373
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaac 81  Q
    |||||||||||||||||||||||||| ||| | |||||||| || |||||| |||||||||||||||    
T  41366437 agcagagatgaggatgttgtgttggaagtg-ggtaagacta-acgagattggattagaaatgacaac 41366373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 44860772 - 44860814
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactaga 57  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  44860772 agcagaaatgaggatgttgtgttggatgtgtggtaagactaga 44860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 56439743 - 56439805
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaa 225  Q
    |||||||||||||||||||||||||||||| | |||| | ||||||| ||| || ||||||||    
T  56439743 gtaaggagagtagatcagatggaggatagttagatcactagaggcagaggacgatctagaaaa 56439805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 1777379 - 1777310
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  1777379 agcaaagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 1777310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 10775786 - 10775717
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| |||||||||||||||| |||  | ||| ||||| ||  ||||||||||||||||||||    
T  10775786 agcagagatgatgatgttgtgttggatgcgtggcaggaccagacaggaaagaattagaaatgacaacatt 10775717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 17900398 - 17900467
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||||||||||| |||||||||||| ||||||||||   |||  ||||||||||||| |||||    
T  17900398 agcagaaatgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaatgacgacatt 17900467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 17900506 - 17900587
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggag 186  Q
    ||||||||||||||| |  || |||||||| ||||||| ||| | |||| | |||||||  |||||||||||||||||||||    
T  17900506 ggtagaaactagactcatgtggtttgggcacgtagagagaagacctgtggattatgtagataggagagtagatcagatggag 17900587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 20105831 - 20105766
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| ||||||| | |||||||||| ||||||||||| ||||   ||||||||||||||||||    
T  20105831 gagatgatgatgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacatt 20105766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 31339566 - 31339686
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||  ||||| || |||| ||||||||||| ||| | |||  | ||||||||||||| ||||||||| ||| ||  ||||| ||||| | ||||||    
T  31339566 gaaactaagcttaggtggtttgagcatgtagagagaagacttgtagattatgtagtaaggatagtagatcaaatgaagagtagtc-aatcactagaggca 31339664  T
Q  209 gtggaggacctagaaaaactat 230  Q
    | ||| ||||||||||||||||    
T  31339665 gaggaagacctagaaaaactat 31339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 34233393 - 34233328
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| |||||||||||||||||||| ||||||||||   ||| | |||||||| |||||||||    
T  34233393 gagatgatgatgttgtgttggatgtgtgataagactagatgtgataggattagaaacgacaacatt 34233328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 44686927 - 44686862
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||| |||||||||||||| || | ||| |||||||||||| | ||||||| ||||||||||    
T  44686927 gagatgagaatgttgtgttggatatgcggtaatactagacaagatagtattagaagtgacaacatt 44686862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 45175930 - 45175991
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||||||||| ||||||||||| ||  ||||||||||||   ||||||||||||||    
T  45175930 gagatgaggatgttgtcttggatgtgtggtagtactagacaagataatattagaaatgacaa 45175991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 45185365 - 45185312
Alignment:
Q  31 ttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||  ||||||||||  |||| ||||||||||||||||||||    
T  45185365 ttgtgttggatgtgtagtaagactagatgagatagaattagaaatgacaacatt 45185312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 45205208 - 45205143
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||| ||| |||||||||||  ||| | ||||| ||||||| ||||    
T  45205208 gagatgaggatgttgtgttggatgagtggtaagactagacgggataggattaggaatgacaccatt 45205143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 48622905 - 48622836
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  48622905 agcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccatt 48622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 50286889 - 50286958
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||| |||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  50286889 agcagagatgaggaagttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 50286958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 51841543 - 51841502
Alignment:
Q  27 gatgttgtgttggatgtgtgttaagactagacaagattgaat 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  51841543 gatgttgtgttggatgtgtggtaagactagacaagatagaat 51841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 52569879 - 52569810
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| |||||||||||||||||| | | |||||||||||| ||| | ||||| ||||||| ||||    
T  52569879 agcagagatcaggatgttgtgttggatgaggggtaagactagacaggataggattaggaatgacaccatt 52569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 4137057 - 4137017
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaa 60  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  4137057 agatgaggattttgtgttggatgtgtggtaagactagacaa 4137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 30853338 - 30853382
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagat 63  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||    
T  30853338 gagatgaagatgttgtgttggatgtatggtaagactagacaagat 30853382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 33709837 - 33709881
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  33709837 agcagagatgatgatgttgcgttggatgtgtggtaagactagaca 33709881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 44360014 - 44360066
Alignment:
Q  28 atgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    ||||||||||||||||||| || |||||| | |||| ||||||||||||||||    
T  44360014 atgttgtgttggatgtgtggtaggactaggcgagatagaattagaaatgacaa 44360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 49987514 - 49987570
Alignment:
Q  185 aggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||| ||| | ||||||| ||| |||||||||||||||| ||||||||||    
T  49987514 aggatagtcaattcactagaggcagaggaagacctagaaaaactataagagaaacta 49987570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 51550502 - 51550422
Alignment:
Q  107 tagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    |||| ||||||||||| || |||||||||||||||| |||  ||||| | | | ||| ||||||||| |||||||||||||    
T  51550502 tagagactagacttaggtggtttgggcatgtagagagaagatatgtggattctctagcaaggagagttgatcagatggagg 51550422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 11389804 - 11389875
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||||| |||||||   ||||||||||| | |||| || ||| ||| ||||||||||||    
T  11389804 tgtagtaaggagagtagataagatggaaagtagtcaaatcactagaggtagaggaagacgtagaaaaactat 11389875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 47611807 - 47611874
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    |||| ||||||||||| ||||||||||||| ||||| | | || ||||||| ||| ||||||||||||    
T  47611807 tgtaataaggagagtaaatcagatggaggagagtcagacccttagaggcagaggaagacctagaaaaa 47611874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 25755237 - 25755279
Alignment:
Q  17 cagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    |||||||||| |||||||||| |||||||| ||||||||||||    
T  25755237 cagagatgagaatgttgtgttagatgtgtggtaagactagaca 25755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 37488171 - 37488253
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||| ||||||||||||||||| | ||| |||| ||||    |||||| ||  |||||||||||||||| ||||||||||    
T  37488171 tgtagtagggagagtagatcagatgcatgattgtcagatcaccataggcagaggtagacctagaaaaactataagagaaacta 37488253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 38571099 - 38571042
Alignment:
Q  26 ggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||| ||  |||||||||||| | ||| ||||||||||||||    
T  38571099 ggatgttgtgttggatgtgtggtac-actagacaagataggattggaaatgacaacatt 38571042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 42293621 - 42293579
Alignment:
Q  16 gcagagatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||    
T  42293621 gcagagatggggatgttgtgttggatgcgtggtaagactagac 42293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 50680821 - 50680899
Alignment:
Q  160 gtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||||||||||||||  ||| |||||||| | |||| |  |||||| ||  |||||||||||||||| |||||||    
T  50680821 gtagtaaggagagtagatccaatgaaggatagttagatcactataggcagaggtagacctagaaaaactataagagaaa 50680899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 436147 - 436216
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||| ||| | ||||  ||||||| ||||    
T  436147 agcagagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccatt 436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25967623 - 25967562
Alignment:
Q  23 tgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| | |||||||||| |||||||||||| | | | |||||||||||| |||||    
T  25967623 tgaggatgttgcgatggatgtgtggtaagactagacatggtaggattagaaatgactacatt 25967562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 28485628 - 28485657
Alignment:
Q  171 agtagatcagatggaggatagtcaaatcat 200  Q
    ||||||||||||||||||||||||||||||    
T  28485628 agtagatcagatggaggatagtcaaatcat 28485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 31403384 - 31403315
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||| |||| ||||||| | ||| |||||  ||| | ||||||||||||||||||    
T  31403384 agcagagatgatgatgttgagttgaatgtgtggtgagattagacgggataggattagaaatgacaacatt 31403315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 33227127 - 33227196
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| | |||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  33227127 agcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccatt 33227196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 40933255 - 40933198
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatga 77  Q
    |||||||||||||| |||| ||||||| |||||| | ||| ||| |||||||||||||    
T  40933255 agatgaggatgttgcgttgaatgtgtggtaagacaatacatgatagaattagaaatga 40933198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 48174457 - 48174388
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||||||||||||| |||||||| ||| |||||||||||| |||   ||||| ||||||| ||||    
T  48174457 agcaaagatgaggatgttgcgttggatgagtggtaagactagacatgatatgattaggaatgacaccatt 48174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 51252823 - 51252754
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||| || |||||| ||||||| |||||||  ||||||||||| |||| | |||||||||||| |||||    
T  51252823 agcagggaggaggattttgtgttagatgtgtcgtaagactagacgagataggattagaaatgactacatt 51252754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 53707712 - 53707781
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||| ||| | | ||| ||||||| ||||    
T  53707712 agcagagatgaggatgttgcgttggatgagtagtaagactagacatgataggactaggaatgacaccatt 53707781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 55028896 - 55028977
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaact 240  Q
    ||||||||| ||||||||| ||||| | | ||||||||||| | ||||||  ||| ||  |||||||||||| |||||||||    
T  55028896 tgtagtaagaagagtagataagatgcatggtagtcaaatcactagaggcataggaagagttagaaaaactataagagaaact 55028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 10208977 - 10209025
Alignment:
Q  36 ttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||||||   ||| ||||||||||||||||||||    
T  10208977 ttggatgtgtggtaagactagatgggatagaattagaaatgacaacatt 10209025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27991779 - 27991719
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaat 75  Q
    |||||| |||| |||||||||||||||||||| ||||| ||||  |||| |||||| ||||    
T  27991779 agcagaaatgaagatgttgtgttggatgtgtggtaagattagatgagatagaattaaaaat 27991719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 35690226 - 35690286
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgaca 79  Q
    ||||||||||||||| |||||||| ||  ||||||||||| |||| | ||||| |||||||    
T  35690226 gagatgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgaca 35690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 35690361 - 35690433
Alignment:
Q  169 agagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| ||| |||||||||| ||||| ||||   |||| || ||| |||||||||||||||| ||||||||||    
T  35690361 agagtggattagatggaggaaagtcagatcaaaagaggtagaggaagacctagaaaaactataagagaaacta 35690433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 39708517 - 39708593
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    ||||| |||||||||||||||||||| |||||  |||   |||| || ||| ||||||| |||||||| ||||||||    
T  39708517 gtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataagagaaac 39708593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 40933114 - 40933053
Alignment:
Q  162 agtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaa 225  Q
    ||||| |||||||||||||||||||  |||||||||||   ||||||| ||| |||||||||||    
T  40933114 agtaaagagagtagatcagatggag--tagtcaaatcaccagaggcagaggaagacctagaaaa 40933053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 28628137 - 28628053
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||| ||||||||||||||||||||   |||| || ||| |||||||||||||||| ||||||||||    
T  28628137 tatgtagtaaggagagtagatccgatggaggatagtcaaatcacaagaggtagaggaagacctagaaaaactataagagaaacta 28628053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 47848704 - 47848836
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||| ||| ||||| || ||||||||||| |||| ||| | ||| || | |||| ||||||||||||||||||||||||||||||  |||| | ||||||    
T  47848704 gaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgatcactagaggca 47848803  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| || ||||||||||||| ||||||||||    
T  47848804 gaggaagaactagaaaaactataagagaaacta 47848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 48202950 - 48202827
Alignment:
Q  113 ctagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtgg 212  Q
    |||| ||||| || |||| ||||||||||| ||| | |||  | | ||||||||||||||||||||| |||| ||||||||||||||||  |||||| ||    
T  48202950 ctaggcttaggtggtttgcgcatgtagagagaagacttgtagattctgtagtaaggagagtagatcatatggtggatagtcaaatcattataggcagagg 48202851  T
Q  213 aggacctagaaaaactatcagaga 236  Q
    | | |||||||||||||| |||||    
T  48202850 aaggcctagaaaaactataagaga 48202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 38135414 - 38135333
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||||||  || |||||||||||| ||| ||||||||||    
T  38135414 tgtagtaaggaga-tagatcagatggaggatagtcagatcattagaggcagatgaagacctagaaaaagtataagagaaacta 38135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 6420742 - 6420610
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||| ||||| || |||||||||||||||| ||| | |||  |   ||||||||||||||||||||||||| | |||||||| |||| | ||||||    
T  6420742 gaaactaggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatgaatgatagtcagatcactagaggca 6420643  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||  |||||| ||||||||| ||||| ||||    
T  6420642 gaggtagacctataaaaactataagagatacta 6420610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14593679 - 14593748
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||||||| |||||||||||   |  ||||||||||||||||||||    
T  14593679 agcagagatgaggatgttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacatt 14593748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36514569 - 36514500
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||  ||| |||||||||| |||||||||    
T  36514569 agcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacatt 36514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 37617862 - 37617931
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||| | ||||| ||||||| ||||    
T  37617862 agcagagatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccatt 37617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 18605402 - 18605266
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||| |||||| || |||| ||||||||||| ||| |||||  | ||| |||| |||||| |||||||||| ||||| |||||||||| | ||    
T  18605402 ggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgaggagagtcaaatcactaga 18605303  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
     | |  ||  |||||||||||||||  ||||||||||    
T  18605302 tgtatgggtagacctagaaaaactacaagagaaacta 18605266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 18637588 - 18637682
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||| |||||| || |||| ||||||||||| ||| |||||  | ||| |||| |||||| |||||||||| ||||| ||||||||||    
T  18637588 ggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgaggagagtcaaatca 18637682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 18651022 - 18651116
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||| |||||| || |||| ||||||||||| ||| |||||  | ||| |||| |||||| |||||||||| ||||| ||||||||||    
T  18651022 ggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgaggagagtcaaatca 18651116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 36514463 - 36514381
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    |||||||||||||||||| || |||||||||||||||| | | | |||| | | ||||||| |||||||||||||||| ||||    
T  36514463 ggtagaaactagacttaggtggtttgggcatgtagagagacgacttgtggattctgtagtatggagagtagatcagatagagg 36514381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 5335840 - 5335909
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||  ||  |||||||||||| ||||||    
T  5335840 agcagagatgaggatgttgcgttgaatgtgtggtaagactagacagaatgcaattagaaatgataacatt 5335909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 5335950 - 5336071
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||| || ||||||||| |||||| |||   |||| | | |||||| |||||||||||| |||||||||  |||||||||| | |||| |    
T  5335950 gaaactagacttaggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattagatggaggggagtcaaatcactcgaggta 5336049  T
Q  209 gtggaggacctagaaaaactat 230  Q
    | |||  |||| ||||||||||    
T  5336050 ggggaaaaccttgaaaaactat 5336071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 16013202 - 16013271
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||||||| |||||||||||   |   |||||||||||||||||||    
T  16013202 agcagagatgaggatgttgcgttggatgtgtggtaagactagacggaaccaaattagaaatgacaacatt 16013271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 26742094 - 26742025
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatca 232  Q
    |||||||||||||||||||| ||| ||||||| |||| | ||||||| ||| ||| ||||||||||||||    
T  26742094 gtaaggagagtagatcagatagagaatagtcagatcactagaggcagaggaagacgtagaaaaactatca 26742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 30200323 - 30200254
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||||||| ||||| ||||   |||   ||||||||||||||||||    
T  30200323 agcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacatt 30200254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 33072872 - 33072941
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||||||| | ||||| ||||||| ||||    
T  33072872 agcagagatgatgatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccatt 33072941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 35906565 - 35906496
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  35906565 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 35906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36869653 - 36869584
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||| ||| | ||||| ||||||| ||||    
T  36869653 agcagagatgaggatgttgtgttggatgagtggtaagactggacatgataggattaggaatgacaccatt 36869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 39812005 - 39812098
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggaccta 220  Q
    |||||||||||||||| |||  ||||  | | | |||||||||||||||||||||||||||| || ||||||| | |||| |||||| ||||||    
T  39812005 tttgggcatgtagagagaagagatgtagattctatagtaaggagagtagatcagatggaggaaagccaaatcactagaggaagtggaagaccta 39812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 1740881 - 1740921
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  1740881 tgtagtaaggagagtagatcagatggagggtagtcaaatca 1740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 14593791 - 14593922
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| |||||||||||||||| || ||| | |||| | | ||||      | |||||||||||| |||   |||||||||| | ||    
T  14593791 ggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactaga 14593885  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||||||||||||| ||||||||||    
T  14593886 ggtaggggaagacctagaaaaactataagagaaacta 14593922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 16013314 - 16013445
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||||| |||||||||||||||| || ||| | |||| | ||||||      | |||||||||||| |||   ||||||||||   ||    
T  16013314 ggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattatgta-----tatagtagatcagatagagaggagtcaaatcaccaga 16013408  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||||||||||||| ||||||||||    
T  16013409 ggtaggggaagacctagaaaaactataagagaaacta 16013445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 12841639 - 12841576
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgac 78  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||| ||| | ||||| ||||||    
T  12841639 agcagagatgaggatgttgtgttggatgagtggtaaaactagacatgataggattaggaatgac 12841576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 36651914 - 36651981
Alignment:
Q  17 cagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  36651914 cagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36651981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 47848596 - 47848635
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  47848596 gagatgaggatgttgtgttggatgtgtggtaagactagac 47848635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 1569096 - 1569178
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||| |||||||||||||||||||||||||||||| ||   | ||||||| ||  | |||||||||||||| |||| |||||    
T  1569096 tgtagaaaggagagtagatcagatggaggatagtcagattgctagaggcagaggtagtcctagaaaaactataagagtaacta 1569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 24550051 - 24550009
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactaga 57  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  24550051 agcagagatgaggatgttgtgttggatgtgttgtaagactaga 24550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 25579329 - 25579239
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||| ||| ||||| || |||||| ||||||||| ||| |||||  | | ||| ||||| ||||||||| |||||||||||||||||||||    
T  25579329 gaaaataggcttaggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaaatca 25579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 34869341 - 34869407
Alignment:
Q  18 agagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  34869341 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 34869407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 39811882 - 39811944
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||  ||||||||||| |||||||||||  ||| | ||||||||||||||||||    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacatt 39811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 11593878 - 11593947
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| |||   ||||| ||||||| ||||    
T  11593878 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 11593947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 13859372 - 13859303
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  13859372 agcagagatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccatt 13859303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 19119608 - 19119544
Alignment:
Q  176 atcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||| |||||||||| | |||| |||||| ||||||| |||||||| ||||||||||    
T  19119608 atcagatggaggagagtcaaatcactagaggtagtggaagacctag-aaaactattagagaaacta 19119544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 27021943 - 27021831
Alignment:
Q  110 aaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcag 209  Q
    ||||||| ||||| || |||||||||||||||| |||  |||   | | | ||||||||| |||||||| ||||| ||||||||| |||| | |||| ||    
T  27021943 aaactaggcttaggtggtttgggcatgtagagagaagaaatg---attctatagtaaggacagtagatctgatgggggatagtcagatcactagaggtag 27021847  T
Q  210 tggaggacctagaaaa 225  Q
     |||||||||||||||    
T  27021846 aggaggacctagaaaa 27021831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31005141 - 31005210
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||| ||| ||||    
T  31005141 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccatt 31005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40008777 - 40008712
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| ||||||| || ||||||||| ||| ||||||||| |  ||||||||||||||||||||    
T  40008777 gagatgaagatgttgcgtaggatgtgtggtaaaactagacaaaaaagaattagaaatgacaacatt 40008712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 44855536 - 44855467
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| ||||||||||| |||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  44855536 agcagagatcaggatgttgtgctggatgagtggtaagactagacatgataggattaggaatgacaccatt 44855467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 49029194 - 49029263
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||  |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  49029194 agcagagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 49029263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 19262689 - 19262586
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||||| | ||||| || |||| ||||||||||| ||| | |||  | | ||||||||| ||||||||||||||||||  ||||||||||| | ||    
T  19262689 ggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagatt-tgtagtaagaagagtagatcagatggagtgtagtcaaatcactaga 19262591  T
Q  205 ggcag 209  Q
    |||||    
T  19262590 ggcag 19262586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 30814851 - 30814791
Alignment:
Q  181 atggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||| |||| | ||||||| ||| |||||||||| ||||| ||||||||||    
T  30814851 atggaggatagtcagatcactagaggcagaggaagacctagaaacactataagagaaacta 30814791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 40139279 - 40139211
Alignment:
Q  16 gcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||  |||   |||||||| |||||||||    
T  40139279 gcagagacgaggatgttgtgtgggatgtgtggtaagactagacgggataagattagaaaagacaacatt 40139211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 36101959 - 36101900
Alignment:
Q  167 ggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    ||||||||||||| |||||| ||||||| |||| | ||||||| ||| ||||||||||||    
T  36101959 ggagagtagatcatatggagaatagtcagatcactagaggcagaggaagacctagaaaaa 36101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 42187393 - 42187432
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  42187393 gagatgaggatgttgtgttggatgtgtagtaagactagac 42187432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 48736152 - 48736073
Alignment:
Q  108 agaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    ||||||||||||||| || ||||  |||||||||  ||| | |||| | |||||||| |||||||||||||| |||||||    
T  48736152 agaaactagacttaggtggtttgctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggagg 48736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 7220838 - 7220904
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaac 227  Q
    ||||| ||||||||||| ||||||||||||||||||| | | ||||||| | | |||||| ||||||    
T  7220838 tagtatggagagtagattagatggaggatagtcaaattactagaggcagagtaagacctataaaaac 7220904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 27022063 - 27022001
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||| ||||||  ||||||||||| |||||||||||| ||| | |||| |||||||||||||    
T  27022063 atgagaatgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacatt 27022001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 36136844 - 36136926
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||| | |||| ||||||||||||||| ||||| ||||   || | || ||| |||||||||||||||| ||||||||||    
T  36136844 tgtagtacgaagagcagatcagatggaggagagtcagatcagaagaagtagaggaagacctagaaaaactataagagaaacta 36136926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 43282330 - 43282392
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||| ||| |||||||| |||| ||||||| |||   ||||||||||||||||||    
T  43282330 atgaggatgttgcgttagatgtgtggtaagtctagacatgatatgattagaaatgacaacatt 43282392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 48736256 - 48736194
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||| |||| ||||||| ||||||||||  ||||  ||||||||||||| |||||    
T  48736256 atgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacatt 48736194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 1740715 - 1740756
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactag 56  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  1740715 agcagagatgaggatgttgcgttggatgtgtagtaagactag 1740756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 5418160 - 5418209
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    ||||||||| |||||||||||| ||||||||||||| |||| | ||||||    
T  5418160 tgtagtaagtagagtagatcaggtggaggatagtcagatcactagaggca 5418209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 28359340 - 28359377
Alignment:
Q  162 agtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  28359340 agtaaggagagtatatcagatggagggtagtcaaatca 28359377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 29653918 - 29653849
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||  || ||||| |||||||||||| ||| |||||||  ||| ||||||||||||||| ||||    
T  29653918 agcagagatacggctgttgcgttggatgtgtggtaacactagacgggatagaattagaaatgacatcatt 29653849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 33350170 - 33350101
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  33350170 agcagagatgaggatgttgccttggatgagtggtaagactagacatgataggattaagaatgacaccatt 33350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 39906730 - 39906665
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||| || |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  39906730 gagatgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 39906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 40008614 - 40008573
Alignment:
Q  165 aaggagagtagatcagatggaggatagtcaaatcatttgagg 206  Q
    ||||||||||||| |||||||||||||| |||||||| ||||    
T  40008614 aaggagagtagattagatggaggatagttaaatcattagagg 40008573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 45836840 - 45836775
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| | |||||| ||| ||||| |||||||||| | ||||| ||||||| ||||    
T  45836840 gagatgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccatt 45836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 24598509 - 24598441
Alignment:
Q  16 gcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| ||||||||||||||||||| ||| ||||  |||||| ||| | ||||| ||||||| ||||    
T  24598509 gcagagacgaggatgttgtgttggatgagtggtaagtttagacatgataggattaggaatgacaccatt 24598441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 27893746 - 27893682
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||||||||||| ||| |||| | |||  || ||| | ||||||||||||||    
T  27893746 aggagagtagatcagatggaggatattcagatcactagagatagaggaagtcctagaaaaactat 27893682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 35713725 - 35713817
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatt 201  Q
    |||| ||| ||||| || |||||||||||||||| ||| | |||  | | |||||||||||||||||||| |||| ||| |||| | ||||||    
T  35713725 gaaaataggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggagagtagatctgatgaagggtagttatatcatt 35713817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 45558388 - 45558468
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatgga 185  Q
    |||||||||| ||||||| || |||| ||| ||||||| ||  | |||| | | |||||| ||||||||||||||||||||    
T  45558388 ggtagaaactcgacttaggtggtttgtgcacgtagagagaatacctgtggattctgtagttaggagagtagatcagatgga 45558468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 2544681 - 2544760
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||||||| || | |||| || ||| |||||||||||||||||||||||||||    
T  2544681 tagtaaggagagtagatcagatggaggatagtcaaa-cactagaggtagaggaagacctagaaaaactatcagagaaacta 2544760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 29807892 - 29807984
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaat 197  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||||| | |||||||||| |||||||||| | |||||||  ||||||||    
T  29807892 ggtagaaactagacttacgtgatttgggcatgtagagagaagacatgtggattatgtagtaaagagagtagattaaatggaggggagtcaaat 29807984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 4379927 - 4379992
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||    
T  4379927 gagatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacatt 4379992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 6025690 - 6025767
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||| ||| ||||||||||| | ||||||| ||| |||||||||||||||| ||||| ||||    
T  6025690 taaggagagtagatcagatgtagggtagtcaaatcactagaggcagaggaagacctagaaaaactataagagatacta 6025767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 27637887 - 27637751
Alignment:
Q  107 tagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatc--agatggaggatagtcaaatcatttga 204  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| |   ||||||||||||||||||||  | ||||||   || ||||||| | ||    
T  27637887 tagaaactagacttaggtgttttgggcatgtagagaaaagacatgtggatgttgtagtaaggagagtagatcatatatggagtggaggcaaatcactaga 27637788  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||| ||||||| | ||||||||||    
T  27637787 ggtaggggaagacctaaaaaaacttttagagaaacta 27637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 52442868 - 52442799
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||    
T  52442868 agcagacatgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacatt 52442799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 38868969 - 38869041
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||  || |||||||||||||||| |||||||    
T  38868969 aggagagtagattagatggagggtagtcaaatcattagaggcagaagaagacctagaaaaactataagagaaa 38869041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 42501188 - 42501267
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||| |||| || |||  ||||||||||||||| |||||||    
T  42501188 tgtagaaaggagagtagttcagatggagggtagtcaaatcattagaggtagaggaaaacctagaaaaactataagagaaa 42501267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 40419665 - 40419747
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggagg 187  Q
    ||||| |||||||||||  || |||||||||||||||| ||| |||||| | ||||||| ||||||||||| |||||||||||    
T  40419665 ggtagtaactagacttaagtggtttgggcatgtagagagaagacatgtggattatgtagcaaggagagtagttcagatggagg 40419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 50771758 - 50771676
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||  |||||||| | | |||| || ||| |||||||||||||||| || |||||||    
T  50771758 tgtagtaaggagagtagatcagatggaggggagtcaaatgactagaggtaggggaagacctagaaaaactataagcgaaacta 50771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 5338806 - 5338883
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaa 238  Q
    |||||||||||||||||||||||||||||| ||| |||| | |||||||  |  |||||||||||||||| |||||||    
T  5338806 tagtaaggagagtagatcagatggaggatattcagatcactagaggcagaagtagacctagaaaaactataagagaaa 5338883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9509236 - 9509305
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||   ||||||||||||| ||||    
T  9509236 agcagagatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccatt 9509305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 12261969 - 12261833
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||| ||||||||||||| || ||||||||||| |||  ||| | | || | | |||||||| ||| ||||||| ||||||||| |||||||||| | ||    
T  12261969 ggtataaactagacttaggtggtttgggcatgtggagggaagacttttggattttgtagtaatgagggtagatctgatggaggagagtcaaatcactaga 12261870  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||  | | | |||||||||||||||| ||||||||||    
T  12261869 ggtggggtaagacctagaaaaactataagagaaacta 12261833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 13827772 - 13827701
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||||||| |||||  ||||||| |||| | ||||||| ||| ||||||||||||||||    
T  13827772 tgtagtaaggagagtagatcatatggaacatagtcagatcactagaggcagaggaagacctagaaaaactat 13827701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 3819106 - 3818976
Alignment:
Q  111 aactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagt 210  Q
    |||||||||||  || |||||||||||||| | ||| | |||| | | | |||||| |||||||||||||||||||| || ||||| || | |||  ||     
T  3819106 aactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatcagatggagggtaatcaaaccactagagaaaga 3819007  T
Q  211 ggaggacctagaaaaactatcagagaaacta 241  Q
    ||| ||||| |||||||||| ||||||||||    
T  3819006 ggaagaccttgaaaaactataagagaaacta 3818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 33561060 - 33560978
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||  |||||||| ||||||||||| | ||||||| ||| | |||||||||||| | || |||||||    
T  33561060 tgtagtaaggagagtagatatgatggagggtagtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaacta 33560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 1210663 - 1210732
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  1210663 agcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 1210732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 8796290 - 8796371
Alignment:
Q  160 gtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||| ||| ||||||||||||||| |||| | ||||||| ||| |||| | ||||||| | ||||||||||    
T  8796290 gtagtaaggagagtaaatcggatggaggatagtcagatcactagaggcagaggaagaccaataaaaactttaagagaaacta 8796371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9592652 - 9592721
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  9592652 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 9592721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 16822376 - 16822319
Alignment:
Q  22 atgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgaca 79  Q
    ||||||||||||||||||||||||| ||| |||||| ||||| | |||||||||||||    
T  16822376 atgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaatgaca 16822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 17815564 - 17815641
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||| |||||| |||||||||||  ||||||||||||| ||||||  ||| |||||||||||| ||| ||||||||||    
T  17815564 taagaagagtaaatcagatggagagtagtcaaatcattggaggcaagggaagacctagaaaaattataagagaaacta 17815641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 30202494 - 30202425
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  30202494 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 30202425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 30834174 - 30834097
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||| | ||||||||||  | |||| || ||| ||||||||||| |||| ||||||||||    
T  30834174 taaggagagtagatcagatggaaggtagtcaaatcgatagagggagaggaagacctagaaaagctataagagaaacta 30834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 9599586 - 9599514
Alignment:
Q  169 agagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||| ||||| |||||  |||| || ||| |||||||||||||||  ||||||||||    
T  9599586 agagtagatcagatggaggagagtcagatcataagaggtagaggaagacctagaaaaactacaagagaaacta 9599514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 26016355 - 26016399
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  26016355 agcagagatgaggatgttgcgttggatgtgtggtaagactagaca 26016399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 32404726 - 32404646
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||  |||||||||||||||| ||||   |||| || ||| |||||| ||||||||| ||||||||||    
T  32404726 tagtaaggagagtagagaagatggaggatagtcatatcacaagaggtagaggaagacctacaaaaactataagagaaacta 32404646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 43898307 - 43898391
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||||||||||  ||||||||||    ||| || | | ||||| |||||||||| ||||||||||    
T  43898307 tatgtagtaaggagagtagatcagatggaggggagtcaaatcaccaaaggtagggaaagacctggaaaaactataagagaaacta 43898391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 241
Target Start/End: Complemental strand, 52442788 - 52442648
Alignment:
Q  101 ttggggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcat 200  Q
    |||||||||||||||||||||| ||| ||||||||||  ||| ||  ||||||   | ||||||   |||||||||||||||||| |  |||||||||      
T  52442788 ttggggtagaaactagacttaggtgagttgggcatgtgaagagaaaacatgtgggttctgtagtgcagagagtagatcagatggaagggagtcaaatctc 52442689  T
Q  201 ttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    | |||| || ||| ||||||||| || ||| ||||||||||    
T  52442688 tagaggtagaggaagacctagaacaaatataagagaaacta 52442648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 9599758 - 9599715
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  9599758 agcagagatgaggatgttgtgttggatgagtggtaagactagac 9599715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 43375791 - 43375724
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaa 224  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| | ||||||| ||  ||||||||||    
T  43375791 tatgtagtaaagagagtagatcagatggtggatagtaaaatcactagaggcagagggagacctagaaa 43375724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 49377417 - 49377480
Alignment:
Q  172 gtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagag 235  Q
    |||||||||||||||  ||||||||||| | ||||||| ||| |||||||||||||||| ||||    
T  49377417 gtagatcagatggagagtagtcaaatcactagaggcagaggaagacctagaaaaactattagag 49377480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 36340005 - 36339923
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||| | || ||||||||||||||||   | |||| | |||| || ||| |||||||||||||||||||||||||||    
T  36340005 tgtagtaaggcgggttgatcagatggaggatacctagatcactagaggtagaggaagacctagaaaaactatcagagaaacta 36339923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 40416451 - 40416533
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||||||| |||||||||| ||||    || |||  || |||||||||||||||| ||| ||||||    
T  40416451 tgtagtaaggagagtagatcagatgcaggatagtcagatcaccaaagacagaagaagacctagaaaaactataagacaaacta 40416533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 8391694 - 8391759
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||| |||||||||||||||| ||| |||||||| ||||||| | ||||| ||||||| ||||    
T  8391694 gagatgaagatgttgtgttggatgagtggtaagactacacaagataggattaggaatgacaccatt 8391759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 8671838 - 8671907
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  8671838 agcagagataaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 8671907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 14226081 - 14225980
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||| ||| ||||| || ||||||||||||||||  | || |||  | | ||||||||||||||||||||| ||||||  ||||||||||| | ||||||    
T  14226081 gaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcacatggagcgtagtcaaatcactagaggca 14225982  T
Q  209 gt 210  Q
    ||    
T  14225981 gt 14225980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 14226191 - 14226122
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| | |||||| |||||||||||||||| |||| ||||||| ||| | |||||||||| |||||||    
T  14226191 agcagatacgaggattttgtgttggatgtgtggtaaggctagacatgataggattagaaatggcaacatt 14226122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 22090012 - 22090081
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  22090012 agcagagatgaggatgctgtgttggatgagtggtaagactagacaggataggattatgaatgacaccatt 22090081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 27704086 - 27704151
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctaga 222  Q
    ||||||| |||||||||||||||||||||||||  ||| |||| | ||||||| ||| ||||||||    
T  27704086 tatgtagcaaggagagtagatcagatggaggatgttcagatcactagaggcagaggaagacctaga 27704151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 35828754 - 35828681
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    |||||||||||||||| |||||| |||||||||||||| |||  | ||||||| ||| || || ||||||||||    
T  35828754 tatgtagtaaggagagaagatcatatggaggatagtcagatccctagaggcagaggaagatctggaaaaactat 35828681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 39422297 - 39422205
Alignment:
Q  106 gtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||||||||||| ||  |||| |||||||||| ||| |||||  | |||||||| |||||| ||||||| |||||||  ||||||||||    
T  39422297 gtagaaactagacttaggtg-cttggacatgtagagagaagacatgtagattatgtagttaggagaatagatcatatggaggggagtcaaatca 39422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 40419557 - 40419626
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||| || |||| |||| || ||| ||||||  |||| ||||||||||||||||||||    
T  40419557 agcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattagaaatgacaacatt 40419626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 43423749 - 43423866
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||| ||||| || ||||| |||||||||| ||| | |||  | ||||||||||| ||||||||  |||||||   ||||||||||| | |||| |    
T  43423749 gaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagtaagtagagtagactagatggatagtagtcaaatcactagaggta 43423848  T
Q  209 gtggaggacctagaaaaa 226  Q
    | ||| ||||||||||||    
T  43423849 gaggaagacctagaaaaa 43423866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 49347757 - 49347688
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||| |||||||||||||| |||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  49347757 agcaaagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 49347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 10272285 - 10272420
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||||||||||||| |  || ||| |||||||||||| ||| | |||| | |  |||| |||||||| |||||||||||| |  |||||||||| | ||    
T  10272285 ggtagaaactagactaaagtggttttggcatgtagagagaagacctgtggattc-gtaggaaggagaggagatcagatggatgggagtcaaatcactaga 10272383  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||||||||  ||| ||||||||||    
T  10272384 ggtaggggaagacctagaaaacttataagagaaacta 10272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 28528385 - 28528517
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggca 208  Q
    |||||||||||||| || ||| ||||||| | || ||| | |||| | | ||||||||||| ||||||||| |||||||  |||||||||  | || | |    
T  28528385 gaaactagacttaggtggtttcggcatgtcgggagaagacttgtggattctgtagtaaggacagtagatcaaatggaggggagtcaaatccctagaagta 28528484  T
Q  209 gtggaggacctagaaaaactatcagagaaacta 241  Q
    | ||| |||||| ||||||||| | ||||||||    
T  28528485 ggggaagacctaaaaaaactataacagaaacta 28528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 43240745 - 43240701
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagaca 59  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  43240745 agcagagatgaggatgttgcgttggatgagtggtaagactagaca 43240701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 48431658 - 48431574
Alignment:
Q  109 gaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtc 193  Q
    |||| ||| ||||| || |||||||||||||||| ||| | |||  | | |||||||| |||||| |||||||||||||||||||    
T  48431658 gaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggaggatagtc 48431574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 18793244 - 18793165
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatgg 184  Q
    ||||||||||||||||||||||||| |||||| ||||| ||| ||||  |  |  |||||||| ||||||||| ||||||    
T  18793244 ggtagaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 18793165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 34827462 - 34827423
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  34827462 gagatgaggatgttgtgttggatgagtggtaagactagac 34827423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 37263358 - 37263493
Alignment:
Q  106 gtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgag 205  Q
    |||||||||||||||   || |||||||||||||||| ||  | |||| |   ||  |||||||||||| ||||||||||||   ||||||||| | |||    
T  37263358 gtagaaactagacttcagtggtttgggcatgtagagagaaaacttgtggatgttgcggtaaggagagtaaatcagatggaggggtgtcaaatcactagag 37263457  T
Q  206 gcagtggaggacctagaaaaactatcagagaaacta 241  Q
    | || ||| |||||||||| ||||| || |||||||    
T  37263458 gtaggggaagacctagaaatactattagtgaaacta 37263493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 34792713 - 34792651
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatga 77  Q
    ||||||||||||||||||| | |||||| ||| |||||||||||| ||| | ||||| |||||    
T  34792713 agcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatga 34792651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 50636173 - 50636223
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcag 209  Q
    ||||||||||||||||||||| |||||||||| ||| |||| | |||||||    
T  50636173 tgtagtaaggagagtagatcaaatggaggataatcagatcagtcgaggcag 50636223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 696191 - 696256
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| | |||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  696191 gagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccatt 696256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 18359684 - 18359724
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgt--taagactaga 57  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  18359684 gagatgaggatgttgtgttggatgtgtgtggtaagactaga 18359724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 23791900 - 23791819
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggag 186  Q
    |||||| |||| |||||| || |||| ||||||||||| ||| |||||| | |||||||| || || |||||| ||||||||    
T  23791900 ggtagatactaaacttaggtggtttgtgcatgtagagagaagacatgtggattatgtagttagaagggtagatgagatggag 23791819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 29577339 - 29577274
Alignment:
Q  164 taaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaacta 229  Q
    |||||||| ||||||||||||| |||||| | |||| | |||| || ||| |||||||||||||||    
T  29577339 taaggagattagatcagatggaagatagtaagatcactagaggtagaggaagacctagaaaaacta 29577274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 50806750 - 50806831
Alignment:
Q  160 gtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||| |||||||| |||||||  |||||||||| | || | ||  || ||||||||||||| || ||||||||||    
T  50806750 gtagtaaggagggtagatcaaatggaggggagtcaaatcactagaagtagatgaagacctagaaaaacaataagagaaacta 50806831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 50846652 - 50846724
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||||||||||| ||| |||| | ||||||| ||| ||| | ||||   ||||||||||||||    
T  50846652 aggagagtagatcagatggaggataatcatatcactagaggcagaggaagacttggaaa---tatcagagaaacta 50846724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 51234537 - 51234602
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagact-agacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||||| ||||| ||||||| | ||| ||| | ||||||||| ||||||||    
T  51234537 agatgaggatgttgtgttggacgtgtggtaagactaaaacatgataggattagaaattacaacatt 51234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 51441129 - 51441060
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||  ||||| | ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  51441129 agcagagatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccatt 51441060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 853989 - 853905
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||  | |||||| ||  ||||||||||| | ||||||| ||| |||||| |||| ||||  |||||||||    
T  853989 tatgtagtaaggagagtttaccagatgaagattagtcaaatcactagaggcagaggaagacctaaaaaatctatacgagaaacta 853905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 4590879 - 4590823
Alignment:
Q  24 gaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||| |||| ||||| | | |||||||||||||| | ||||||||||||||    
T  4590879 gaggatgttgcgttgaatgtgcggtgagactagacaagataggattagaaatgacaa 4590823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 9509408 - 9509480
Alignment:
Q  169 agagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||| ||||| || |   |||| || ||| |||||||||||||||| ||| ||||||    
T  9509408 agagtagatcagatggaggagagtcatattagaagaggtagaggaagacctagaaaaactataagataaacta 9509480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 12135805 - 12135853
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggc 207  Q
    ||||||||| ||||||||| |||| |||  |||||||||||||||||||    
T  12135805 tgtagtaagtagagtagattagatagagagtagtcaaatcatttgaggc 12135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 16273171 - 16273115
Alignment:
Q  28 atgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||| |||||||||||| ||||||||||  ||||   ||||||||||||||||||    
T  16273171 atgttgcgttggatgtgtggtaagactagatgagatgagattagaaatgacaacatt 16273115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 17640255 - 17640227
Alignment:
Q  159 tgtagtaaggagagtagatcagatggagg 187  Q
    |||||||||||||||||||||||||||||    
T  17640255 tgtagtaaggagagtagatcagatggagg 17640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 17815402 - 17815457
Alignment:
Q  24 gaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    ||||||||||||||||||||||| | |||||||||  ||| | ||||||||||||||    
T  17815402 gaggatgttgtgttggatgtgtggt-agactagacgggatagcattagaaatgacaa 17815457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 30017240 - 30017204
Alignment:
Q  162 agtaaggagagtagatcagatggaggatagtcaaatc 198  Q
    |||||||||||||||| |||||||||||| |||||||    
T  30017240 agtaaggagagtagattagatggaggatattcaaatc 30017204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 9593962 - 9593828
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    |||||||| ||| ||||| || |||||||||||||||| ||| |||||  |   ||||||||| |||||||||||||||||||| ||||||||||   ||    
T  9593962 ggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtcaaatca--aga 9593865  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    || || ||| |||||||||||| ||| ||||||||||    
T  9593864 ggtagaggaagacctagaaaaattataagagaaacta 9593828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 4948508 - 4948436
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaacta 229  Q
    ||||||||||||||||||||||||||||| |||||||||| || | |||| || ||| |||||| ||||||||    
T  4948508 tatgtagtaaggagagtagatcagatggaagatagtcaaaccactagaggtagaggaagacctacaaaaacta 4948436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 4955479 - 4955407
Alignment:
Q  157 tatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaacta 229  Q
    ||||||||||||||||||||||||||||| |||||||||| || | |||| || ||| |||||| ||||||||    
T  4955479 tatgtagtaaggagagtagatcagatggaagatagtcaaaccactagaggtagaggaagacctacaaaaacta 4955407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 9568588 - 9568647
Alignment:
Q  25 aggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| |||||||||||| |||||||||||| ||| |||||| |||||||||||||    
T  9568588 aggatgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaacatt 9568647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 10617586 - 10617525
Alignment:
Q  18 agagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||||| ||| |||||||||||||||||||||||| | || ||||||||||||||||    
T  10617586 agagatgaggat-ttgcgttggatgtgtgttaagactagacgaaatagaattagaaatgacaa 10617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 21870267 - 21870183
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctaga--aaaactatcagagaaacta 241  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |  |||||| ||| ||||||||  ||||||||| |||||||||    
T  21870267 tgtagtaaggagagtagataagatggagagtagtcaaatcactaaaggcagaggaagacctagaaaaaaactatctgagaaacta 21870183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 32755837 - 32755906
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||   ||||| ||||||| ||||    
T  32755837 agcagagatgaggatgttgtgttggatgagtggtaagactagacatgataatattaggaatgacaccatt 32755906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 9749451 - 9749355
Alignment:
Q  134 atgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||| |||||||||  | | | ||||||| ||||||||||| |  |||| ||||||||||||| ||||||| ||| || |||||||||||||    
T  9749451 atgtagagagaagtcatgtagattttatagtaagaagagtagatcaaacagagggtagtcaaatcattagaggcagaggaagatctagaaaaactat 9749355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 8364643 - 8364718
Alignment:
Q  166 aggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||||||||||||||||||||||| |||| |||| | |||| ||  || |||||| ||||||||| ||||||||||    
T  8364643 aggagagtagatcagatggaggattgtcagatcactagaggaagatgaagacctaaaaaaactataagagaaacta 8364718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 579466 - 579580
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaa 226  Q
    |||| ||||||||||| ||| | |||  | ||| ||||||||||||| |||||||||||||||||||  |||| | ||||||| | | |||||  |||||    
T  579466 tttgagcatgtagagagaaggcttgtagattatatagtaaggagagttgatcagatggaggatagtctgatcactagaggcagagaaagacctcaaaaaa 579565  T
Q  227 ctatcagagaaacta 241  Q
    || | ||||||||||    
T  579566 ctgtaagagaaacta 579580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 5897525 - 5897595
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaat 197  Q
    |||||||||||||||| |||  ||||  | | ||||||| |||||||||||| ||||||||||||||||||    
T  5897525 tttgggcatgtagagagaagatatgtatattttgtagtatggagagtagatcggatggaggatagtcaaat 5897595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 14389412 - 14389330
Alignment:
Q  117 acttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||| || ||||| |||||||||| ||| | | |  ||| ||||||||||||| |||||||||||||||||||||| ||||    
T  14389412 acttaggtggtttggacatgtagagagaagacctatagactttgtagtaaggagaatagatcagatggaggatagtcagatca 14389330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 6907054 - 6906989
Alignment:
Q  134 atgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||||||| ||| |||||  | | ||||||||||||||||||||||||| ||| |||||||||||    
T  6907054 atgtagagagaagacatgtagattttgtagtaaggagagtagatcagatgcagggtagtcaaatca 6906989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 12134265 - 12134200
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaa 80  Q
    |||||||||||| |||||||||||||||||||  ||||| |||  | || ||||||||||||||||    
T  12134265 agcagagatgagaatgttgtgttggatgtgtggcaagacaagatgatatagaattagaaatgacaa 12134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 28085294 - 28085363
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||| ||| | ||||  ||||||| ||||    
T  28085294 agcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccatt 28085363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 33998368 - 33998299
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||   ||| | |||||||||||| |||||    
T  33998368 agcagagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacatt 33998299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 6293620 - 6293548
Alignment:
Q  127 tttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    |||||||||||||||| ||  | |||  | |||||| ||||||||||| |||||||| |||||||||||||||    
T  6293620 tttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaaggatagtcaaatca 6293548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 6293733 - 6293685
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagat 63  Q
    |||||||||||||||||||||||||||||||| ||| | ||||| ||||    
T  6293733 agcagagatgaggatgttgtgttggatgtgtggtaaaattagactagat 6293685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 1747841 - 1747762
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaact 240  Q
    ||||||||||||| | | ||||||||| |||||||||   | ||||||| ||| ||||||||||||| || |||||||||    
T  1747841 tagtaaggagagtggcttagatggagggtagtcaaatttctagaggcagaggaagacctagaaaaaccataagagaaact 1747762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 33083976 - 33084039
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgac 78  Q
    |||||| ||||||||| || |||||||||||| ||||||||||   ||| ||||||||||||||    
T  33083976 agcagaaatgaggatgctgcgttggatgtgtggtaagactagatgggatagaattagaaatgac 33084039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 4797010 - 4797088
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    |||| |||||||||||||||| |||||| |||||||||| |||| || | | ||| ||||||||| || ||| ||||||    
T  4797010 gtaaagagagtagatcagatgaaggataatcaaatcattggaggtagagcaagacttagaaaaacgataagataaacta 4797088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 5631741 - 5631779
Alignment:
Q  20 agatgaggatgttgtgttggatgtgtgttaagactagac 58  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  5631741 agatgaggatgttgtgttggatgagtggtaagactagac 5631779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14030724 - 14030794
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgt-gttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||||||| | |||||| || |||||||||||||| ||| | ||||| ||||||| ||||    
T  14030724 agcagagatgaggatgttgcgatggatgagtggttaagactagacaggataggattaggaatgacaccatt 14030794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 9594072 - 9594007
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| |||||||| ||| |||||||||||  ||| | ||||| ||||||| ||||    
T  9594072 gagatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccatt 9594007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 10100217 - 10100152
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||||||||| ||| |||| ||| ||||||||||||| ||   ||||||||||||| ||||    
T  10100217 gagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaatgacaccatt 10100152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17222011 - 17221946
Alignment:
Q  18 agagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacat 83  Q
    |||||| |||||||||  |  |||||||| ||||||| ||||| || |||||||||||||||||||    
T  17222011 agagattaggatgttgcatgagatgtgtgataagacttgacaatatagaattagaaatgacaacat 17221946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 24665836 - 24665925
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgt-gaactatgtagtaaggagagtagatcagatggaggatagtc 193  Q
    |||||||| ||| ||||| || ||||| |||||||||| ||| | ||| ||  | ||||||||||||||||||||||||| || ||||||    
T  24665836 ggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatcagatgaagcatagtc 24665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 30031178 - 30031235
Alignment:
Q  19 gagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatg 76  Q
    ||||||||| |||||||||||||| ||| |||||||||||  ||| | ||||||||||    
T  30031178 gagatgaggttgttgtgttggatgagtggtaagactagacgggataggattagaaatg 30031235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 32913505 - 32913424
Alignment:
Q  118 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatca 199  Q
    ||||| || ||||| ||||||||||||||   |||  | ||||||| |||||||||| || ||||||||| |||||||||||    
T  32913505 cttaggtggtttggccatgtagagaaaagagttgtagattatgtagcaaggagagtatattagatggagggtagtcaaatca 32913424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 7133830 - 7133906
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    ||||| ||||||||||| |||||||| |||||| | |   |||| || ||| |||||||||||||||| ||||||||    
T  7133830 gtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaactattagagaaac 7133906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 7136753 - 7136829
Alignment:
Q  163 gtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaac 239  Q
    ||||| ||||||||||| |||||||| |||||| | |   |||| || ||| |||||||||||||||| ||||||||    
T  7136753 gtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaactattagagaaac 7136829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 25809 - 25740
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||| ||| | ||||| ||||||| ||||    
T  25809 agcagagattaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 25740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 44068 - 43999
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactat 230  Q
    ||||||||||||||||  |||||||||||||||| |||| | |||| || ||||| |||| |||||||||    
T  44068 tagtaaggagagtagactagatggaggatagtcagatcactagaggtaggggaggtcctacaaaaactat 43999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 178622 - 178540
Alignment:
Q  159 tgtagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||| | ||||| |||||  ||||||||| |||| | ||||| | | | |||||||||||||||| ||||||||||    
T  178622 tgtagtaaggacaatagattagatgacggatagtcatatcactagaggcggagtaagacctagaaaaactataagagaaacta 178540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31386 - 31455
Alignment:
Q  15 agcagagatgaggatgttgtgttggatgtgtgttaagactagacaagattgaattagaaatgacaacatt 84  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||| |||   ||||| ||||||| ||||    
T  31386 agcagagattaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 31455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 11824 - 11959
Alignment:
Q  105 ggtagaaactagacttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcagatggaggatagtcaaatcatttga 204  Q
    ||||| |||| | ||||| || |||||||||||||||| |||   ||| | ||||||| | ||||||||||||| | |||||| |||| |||||| | ||    
T  11824 ggtaggaactcggcttaggtggtttgggcatgtagagagaagatctgt-agctatgtattgaggagagtagatccggtggagggtagtgaaatcactaga 11922  T
Q  205 ggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||   || || ||||||||||||| ||||||||||    
T  11923 ggcaaaagaagaactagaaaaactataagagaaacta 11959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 4027 - 3948
Alignment:
Q  161 tagtaaggagagtagatcagatggaggatagtcaaatcatttgaggcagtggaggacctagaaaaactatcagagaaacta 241  Q
    ||||||||||||||||| ||||||| |||||||| ||   | ||||||| ||  |||||| ||||||||| ||||||||||    
T  4027 tagtaaggagagtagataagatggaagatagtcagattgctagaggcagaggtagaccta-aaaaactataagagaaacta 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University