View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5082-Insertion-6 (Length: 616)

Name: NF5082-Insertion-6
Description: NF5082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5082-Insertion-6
NF5082-Insertion-6
[»] chr2 (15 HSPs)
chr2 (8-377)||(9909925-9910289)
chr2 (440-614)||(9910352-9910526)
chr2 (186-376)||(40899750-40899940)
chr2 (267-364)||(14951331-14951428)
chr2 (193-376)||(27888306-27888488)
chr2 (260-366)||(38531850-38531956)
chr2 (186-361)||(6186758-6186933)
chr2 (253-377)||(33543994-33544114)
chr2 (186-376)||(6705141-6705317)
chr2 (446-558)||(14951107-14951219)
chr2 (186-318)||(28165393-28165525)
chr2 (446-558)||(6186541-6186653)
chr2 (186-368)||(1532826-1533006)
chr2 (450-553)||(38531634-38531736)
chr2 (446-530)||(27888557-27888641)
[»] chr3 (8 HSPs)
chr3 (440-614)||(31698972-31699146)
chr3 (186-376)||(46743317-46743507)
chr3 (186-367)||(3460878-3461059)
chr3 (187-363)||(31625481-31625658)
chr3 (186-365)||(52991741-52991919)
chr3 (267-364)||(52984784-52984881)
chr3 (293-368)||(31698825-31698900)
chr3 (446-521)||(46743173-46743248)
[»] chr5 (19 HSPs)
chr5 (188-366)||(42269252-42269430)
chr5 (186-377)||(40600320-40600511)
chr5 (186-367)||(26331858-26332039)
chr5 (440-565)||(42269053-42269178)
chr5 (217-359)||(26331524-26331666)
chr5 (440-614)||(40600094-40600257)
chr5 (186-364)||(12155740-12155919)
chr5 (186-376)||(34574574-34574764)
chr5 (186-376)||(40680507-40680683)
chr5 (188-322)||(24867553-24867687)
chr5 (248-368)||(30248221-30248337)
chr5 (456-550)||(11470623-11470717)
chr5 (186-344)||(42220945-42221103)
chr5 (267-367)||(11470431-11470531)
chr5 (446-558)||(12156021-12156133)
chr5 (248-376)||(23247164-23247288)
chr5 (493-558)||(30248416-30248481)
chr5 (446-530)||(26331696-26331780)
chr5 (493-553)||(42221198-42221258)
[»] chr1 (20 HSPs)
chr1 (186-368)||(10494319-10494501)
chr1 (186-377)||(2077858-2078054)
chr1 (186-367)||(25537235-25537417)
chr1 (186-364)||(14351674-14351853)
chr1 (186-376)||(27787171-27787360)
chr1 (186-376)||(29099063-29099251)
chr1 (186-363)||(8038864-8039040)
chr1 (442-614)||(2077631-2077793)
chr1 (189-320)||(11814175-11814306)
chr1 (186-366)||(47896349-47896529)
chr1 (186-309)||(15495508-15495631)
chr1 (446-565)||(10494579-10494698)
chr1 (186-336)||(4654140-4654289)
chr1 (446-558)||(14351461-14351573)
chr1 (326-364)||(26842372-26842410)
chr1 (186-243)||(40581114-40581171)
chr1 (448-530)||(25537495-25537575)
chr1 (334-376)||(15495643-15495685)
chr1 (441-519)||(26842258-26842336)
chr1 (186-274)||(26842701-26842787)
[»] chr8 (11 HSPs)
chr8 (186-377)||(5514803-5514993)
chr8 (186-363)||(15050481-15050658)
chr8 (441-611)||(3763193-3763363)
chr8 (440-613)||(5515056-5515218)
chr8 (269-367)||(39580491-39580589)
chr8 (186-376)||(10181587-10181776)
chr8 (186-366)||(38498866-38499043)
chr8 (186-318)||(25142524-25142656)
chr8 (300-367)||(3763436-3763503)
chr8 (447-505)||(39580354-39580412)
chr8 (446-530)||(15050317-15050399)
[»] chr7 (10 HSPs)
chr7 (186-377)||(43048128-43048319)
chr7 (189-317)||(24717541-24717669)
chr7 (186-318)||(31038620-31038752)
chr7 (193-376)||(21590967-21591148)
chr7 (440-565)||(24717782-24717907)
chr7 (444-565)||(43047940-43048061)
chr7 (186-366)||(34293848-34294025)
chr7 (186-366)||(10365418-10365597)
chr7 (186-370)||(32978745-32978926)
chr7 (247-306)||(7437050-7437109)
[»] chr4 (10 HSPs)
chr4 (186-365)||(56092745-56092924)
chr4 (186-370)||(12130141-12130324)
chr4 (267-364)||(52635217-52635314)
chr4 (219-370)||(42678037-42678187)
chr4 (193-370)||(45872656-45872832)
chr4 (260-361)||(55728214-55728316)
chr4 (186-366)||(14440735-14440905)
chr4 (253-358)||(44496497-44496600)
chr4 (186-377)||(19676083-19676274)
chr4 (447-527)||(52635427-52635506)
[»] scaffold0974 (2 HSPs)
scaffold0974 (186-377)||(2844-3030)
scaffold0974 (440-558)||(2662-2780)
[»] chr6 (15 HSPs)
chr6 (186-305)||(78406-78525)
chr6 (186-375)||(10772384-10772566)
chr6 (186-366)||(11366388-11366565)
chr6 (186-320)||(32748026-32748160)
chr6 (443-528)||(10772633-10772718)
chr6 (273-364)||(24350678-24350769)
chr6 (267-322)||(10670483-10670538)
chr6 (446-565)||(30845164-30845283)
chr6 (273-366)||(9566550-9566642)
chr6 (440-506)||(10670320-10670386)
chr6 (186-309)||(31026767-31026892)
chr6 (267-309)||(24842732-24842774)
chr6 (444-558)||(24842927-24843040)
chr6 (446-527)||(24350488-24350569)
chr6 (327-376)||(31026713-31026762)
[»] scaffold0083 (1 HSPs)
scaffold0083 (186-344)||(2665-2823)
[»] scaffold0005 (1 HSPs)
scaffold0005 (275-366)||(269672-269762)
[»] scaffold0027 (1 HSPs)
scaffold0027 (253-375)||(2486-2606)


Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 9909925 - 9910289
Alignment:
Q  8 accccatcagtgcatcatggttcgtattgactatcttctttttcttgttacttttggtctatcgtttttgtaactttcgtgggaataaggnnnnnnn-ag 106  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        ||    
T  9909925 accccaccagtgcatcatggttcctattgactatcttctttttcatgttacttttggtctatcgtttttgtaactttcgtgggaataaggttttttttag 9910024  T
Q  107 aataaatattattaactggctcnnnnnnnntatttacttactctattattttatgaaacgttaaatatannnnnnnnnnaagaagctaaaatgaagttta 206  Q
    ||||||||||| |   ||||||        |||||||||||||||||||||||||||||||||| ||||          |||||| |||| || ||||||    
T  9910025 aataaatattaat---tggctcaaaaaaaatatttacttactctattattttatgaaacgttaactatatttttttt--aagaaggtaaa-tggagttta 9910118  T
Q  207 tttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacac 306  Q
    || || |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9910119 ttcaaaacgtaaagaatcgtagcaagcacaaggaatgtttggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacat 9910218  T
Q  307 ccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9910219 ccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 9910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 440 - 614
Target Start/End: Original strand, 9910352 - 9910526
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9910352 gcctgagcaatagcagaaacaagtcttgtgacaaaccgttgcaaaacccatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 9910451  T
Q  540 tctcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaacccc 614  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  9910452 tctcttctgcagttgagcgaagttaaagcgcagttcagcacatgtaaaatcaccacctaagtatttgaaaacccc 9910526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 40899750 - 40899940
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||| || ||||||||| ||  |||||| | ||||||| |||||||||| | | |||||| ||||||  |  |||||||||||||||||||    
T  40899750 aagaagttaaaataaaatttatttaaaacacaaagaaccctagcaagcacaaggaatgctagactatgatacttaaaaaacaacatacaaaggaaaagtg 40899849  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    |||||||||||||| |||||| ||||||||| ||||||  ||||||| ||||||||||| |||||||||||||| |||||||||| |||||    
T  40899850 tgtcgtatatatgcagaacactcaaacaaacccccatgtatcaaatacaaacttctacaaacaaaccaaaaacatcctccactgagggccc 40899940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 14951428 - 14951331
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||  ||||||| |||||||||||    
T  14951428 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacaaccatacatcaaatataaacttctacgaacaaaccgaaaacaccctc 14951331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 376
Target Start/End: Original strand, 27888306 - 27888488
Alignment:
Q  193 taaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgta 292  Q
    ||||||||| ||||||||| || ||||||||| ||||||| |||| ||||| |   ||| |||| ||||  || ||||||||||||||||||||  ||||    
T  27888306 taaaatgaaatttatttaaaacataaagaatcctagcaagcacaacgaatgctaaactaggagaattaaagagcaacatacaaaggaaaagtgtc-cgta 27888404  T
Q  293 tatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||| |||  ||||  |||||||||| ||| ||| |||||    
T  27888405 tatatgcggaacacccaaacaaacactcatgtatcaaatacaaacttccacaagcaaataaaaaacacccaccattgagggccc 27888488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 260 - 366
Target Start/End: Complemental strand, 38531956 - 38531850
Alignment:
Q  260 aagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaaca 359  Q
    |||||| ||||||||||| |||||||||| |||||||| ||||||| |||||||||||| |||   ||||||| ||||||||||||| ||||||||||||    
T  38531956 aagtagcaacatacaaagaaaaagtgtgttgtatatatacggaacatccaaacaaacactcatacatcaaatacaaacttctacatataaaccaaaaaca 38531857  T
Q  360 ccctcca 366  Q
    |||||||    
T  38531856 ccctcca 38531850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 6186933 - 6186758
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaa-gtaggaacatacaaaggaaaagt 284  Q
    |||||||||||||||| |||||| || | | |||||||| |||| || ||||| |||| | | ||| ||  ||||| |||| |||||||||| |||||||    
T  6186933 aagaagctaaaatgaaatttattcaaaatgcaaagaatcctagcgagcacaagcaatgctagactaggaatcttaaagtagaaacatacaaatgaaaagt 6186834  T
Q  285 gtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacacc 361  Q
    ||||  |||||||||||| ||||||||||||||  |||   ||||||||||||||||||| ||||||||||||||||    
T  6186833 gtgta-tatatatgcggagcacccaaacaaacaatcattcatcaaatataaacttctacaaacaaaccaaaaacacc 6186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 33543994 - 33544114
Alignment:
Q  253 gagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaacc 352  Q
    ||||||||| ||  |||||||||| |||||||||||||||     ||||||||| |||||||||||||||   ||||||| |||| |||||| |||||||    
T  33543994 gagacttaaataacaacatacaaaagaaaagtgtgtcgtac----gcggaacactcaaacaaacacccatacatcaaatacaaacgtctacaaacaaacc 33544089  T
Q  353 aaaaacaccctccactgaaggcccc 377  Q
    |||||||||||||||||| ||||||    
T  33544090 aaaaacaccctccactgagggcccc 33544114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 6705141 - 6705317
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||   |||| ||  |||||| | |||||||| | ||||| |||||||||  |  |||||||||||||||||||    
T  6705141 aagaagctaaaatgaaatttatttaaaacactaaga-tcccagcaagcataaggaatgctaggctaggagacttaaaaaacaacatacaaaggaaaagtg 6705239  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    ||||||||||||||||            |||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  6705240 tgtcgtatatatgcgg------------aacacccatg-tacaaatacaaacttctacaaacaaaccaaaaacaccctccactgagggccc 6705317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 558
Target Start/End: Complemental strand, 14951219 - 14951107
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| ||||||| ||||| |||||||||||  || |||||||| ||||| |||||||||||||||||||| || || ||| |||||||    
T  14951219 gcaatagcagaaacaaatcttgtgccaaaccgttgcaaaacccctccaaaataaccatcaaacctaccaaaaactcgtgtaatcgcacattgcttctctt 14951120  T
Q  546 ttgcagttcagcg 558  Q
     ||||||| ||||    
T  14951119 ctgcagttgagcg 14951107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 28165525 - 28165393
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||| | |||||| || ||||||| |||| || | || |||||||||| | ||||| || |||||| ||| |||||| ||||||||||||    
T  28165525 aagaagataaaatggaatttattcaaaacgtaaataatcttatctagcacaaggaatgctaggctaagatacttaaatagcaacatataaaggaaaagtg 28165426  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacac 318  Q
    |||||||||||  |||||||| |||||||||||    
T  28165425 tgtcgtatatacacggaacactcaaacaaacac 28165393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 558
Target Start/End: Complemental strand, 6186653 - 6186541
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| ||||||||||||| |||||||||||  |  ||||||| |||||| | |||||||||||||||||| || |||||  |||||||    
T  6186653 gcaatagcaaaaacaaatcttgtgtcaaaccgttgcaaaaccccttcaaaataattatcaaacttaccaaaaactcgtgtaatcgcactttacttctctt 6186554  T
Q  546 ttgcagttcagcg 558  Q
     ||||||| ||||    
T  6186553 ctgcagttgagcg 6186541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 368
Target Start/End: Original strand, 1532826 - 1533006
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||| | ||  |||||||| ||  |||||||||||||  |  | || |||| ||||  || |||||||||| ||||||||    
T  1532826 aagaaggtaaaatgaaatttatttcaaacacaaagaatcctaataagtacaaggaatc-taagttaggagatttaaagagcaacatacaaacgaaaagtg 1532924  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccact 368  Q
    | |  ||||||||||||||| |||||||| || |||||  ||||||| |||||||||||   |||||||||||||||||||||    
T  1532925 tcta-tatatatgcggaacatccaaacaatcatccatgtatcaaatacaaacttctacaagtaaaccaaaaacaccctccact 1533006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 450 - 553
Target Start/End: Complemental strand, 38531736 - 38531634
Alignment:
Q  450 tagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctcttttgc 549  Q
    ||||| |||||| |||||||  ||||||||||||||||  || |||| ||| ||||| |||||||||||| |||||||||| || ||| || |||| |||    
T  38531736 tagcagaaacaaatcttgtgctaaactgttgcaaaaccc-tccaaaagaaccatcaaacctaccaaaaacccgtgtaaccgcaccttgcttttcttctgc 38531638  T
Q  550 agtt 553  Q
    ||||    
T  38531637 agtt 38531634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 530
Target Start/End: Original strand, 27888557 - 27888641
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccg 530  Q
    ||||||| | |||||| |||||||||||||  ||  ||||||| || |||||||| ||| | |||||||||||||| ||||||||    
T  27888557 gcaatagtagaaacaaatcttgtgtcaaacctttaaaaaacctctccaaaataaccatcgaacctaccaaaaactcatgtaaccg 27888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 440 - 614
Target Start/End: Original strand, 31698972 - 31699146
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||| |||||||||| ||| || |    
T  31698972 gcctaagcaataacataaacaagtcttgtgtcaaactgttgcaaaacccatccaaaataaccatgaatcctaccaaaaacccgtgtaaccgcactctgct 31699071  T
Q  540 tctcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaacccc 614  Q
    |||||| ||||||| |||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  31699072 tctcttctgcagttgagcgcagttaaagcgtagttaagcacaggtaaaatcaccacctaagtatttgaaaacccc 31699146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 186 - 376
Target Start/End: Complemental strand, 46743507 - 46743317
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||  |||||||| ||||||| |||||||||| |  | || |||| ||||  || ||||||||||  |||||||    
T  46743507 aagaaggtaaaatgaaatttatttaaaacacaaagaatcctagcaagcacaaggaatgctaagttaggagatttaaagagcaacatacaaacaaaaagtg 46743408  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    | |||||||| ||||||||| |||||||| ||||||||  ||||||| |||||||||||  ||||||||||||||| |||||||| |||||    
T  46743407 tttcgtatatgtgcggaacatccaaacaatcacccatgtatcaaatacaaacttctacaagcaaaccaaaaacaccatccactgagggccc 46743317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 367
Target Start/End: Complemental strand, 3461059 - 3460878
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| |||||| || |||||||||||| || | || || ||||||| | |||||  |||||||| ||| |||||||||||||||||||    
T  3461059 aagaagttaaaatgaaatttattcaaaacgtaaagaatcctaactagcacgaggaatgctaggctagaagacttaaatagcaacatacaaaggaaaagtg 3460960  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccac 367  Q
    |  |||||||| |||||||||  ||||||||||||||   ||||||| ||| |||| || ||||||||||||||||||||||    
T  3460959 taccgtatatacgcggaacactgaaacaaacacccatacatcaaataaaaatttcttcaaacaaaccaaaaacaccctccac 3460878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 187 - 363
Target Start/End: Original strand, 31625481 - 31625658
Alignment:
Q  187 agaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaag-taggaacatacaaaggaaaagtg 285  Q
    ||||| ||||||||| |||||| || ||| |||||||| |||| || |||||||||  | | ||| |||  ||||  ||| |||||||||||||||||||    
T  31625481 agaagttaaaatgaaatttattcaaaacgcaaagaatcatagcgagcacaaggaatactagactaggagttttaatatagcaacatacaaaggaaaagtg 31625580  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccct 363  Q
    ||||||||||||| ||||||||||||||||||||||    ||||||| ||||||||||  ||||||||||||||||||    
T  31625581 tgtcgtatatatgtggaacacccaaacaaacacccaaacatcaaatacaaacttctaccaacaaaccaaaaacaccct 31625658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 186 - 365
Target Start/End: Complemental strand, 52991919 - 52991741
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||  |||||||| ||||||  ||||| |||| | || || |||||||||  |  |||||||| | ||||| ||    
T  52991919 aagaagctaaaatgaaatttatttaaaacacaaagaatcctagcaaacacaagaaatgctaggttaggagacttaaaaaacaacatacacatgaaaattg 52991820  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcc 365  Q
    |||||||||||| ||||| || |||||||||| || ||  ||||||||||||||||||| | ||||||||||||||||||    
T  52991819 tgtcgtatatatacggaatacacaaacaaaca-ccttgtatcaaatataaacttctacaaataaaccaaaaacaccctcc 52991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 52984881 - 52984784
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||   ||   ||||||||||||||||||  |||||||||||||||||||    
T  52984881 aacatacaaagaaaaagtgtgtcgtgtatatgcgaaacacccaaacaaacaatgatacatcaaatataaacttctactaacaaaccaaaaacaccctc 52984784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 31698825 - 31698900
Alignment:
Q  293 tatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccact 368  Q
    |||||| |||||||||||| |||||| |||   ||||||| ||||||||||| |||||||||||||||||| ||||    
T  31698825 tatatgtggaacacccaaataaacactcatacatcaaatacaaacttctacaaacaaaccaaaaacacccttcact 31698900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 446 - 521
Target Start/End: Complemental strand, 46743248 - 46743173
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactc 521  Q
    ||||||||| |||||| ||||||| |||||  ||  |||||||||| |||||||| ||||| ||||||||||||||    
T  46743248 gcaatagcagaaacaaatcttgtgccaaaccattaaaaaacctatccaaaataaccatcaaacctaccaaaaactc 46743173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 6e-51; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 188 - 366
Target Start/End: Complemental strand, 42269430 - 42269252
Alignment:
Q  188 gaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtg 287  Q
    ||||||||||||||||||||| || ||| |||||||| ||||||| | |||||||| || |||| |||||||||||||||||||||| || |||||||||    
T  42269430 gaagctaaaatgaagtttattcaaaacgcaaagaatcttagcaagcataaggaatgcttagctaggagacttaagtaggaacatacagagaaaaagtgtg 42269331  T
Q  288 tcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    | ||||||||||||||||| ||||||||||  ||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  42269330 ttgtatatatgcggaacactcaaacaaacattcatgcatcaaatacaaacttctacaaacaaaccaaaaacaccctcca 42269252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 186 - 377
Target Start/End: Complemental strand, 40600511 - 40600320
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    ||||||||||||| ||||||||| || ||| |||||||| ||||||  | |||||||| |||| || |||||||||||||||| ||||||||||||||||    
T  40600511 aagaagctaaaataaagtttattcaaaacgcaaagaatcctagcaaacataaggaatgtttggttaggagacttaagtaggaatatacaaaggaaaagtg 40600412  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    ||  || |||||| ||||||||||||||||||| ||||  ||||||| ||||||| ||| |||||||||||||||||||||| || ||||||    
T  40600411 tggtgtgtatatgtggaacacccaaacaaacactcatgcatcaaatacaaacttcaacaaacaaaccaaaaacaccctccaccgagggcccc 40600320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 186 - 367
Target Start/End: Complemental strand, 26332039 - 26331858
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||  | |||||| ||||||| |||||||||| | ||||| |||| ||||  || |||||||||||||||||||    
T  26332039 aagaagttaaaatgaaatttatttaaaacaaatagaatcctagcaagcacaaggaatgctaggctaggagatttaaaaagcaacatacaaaggaaaagtg 26331940  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccac 367  Q
    | |||||||||||||||||| |||||||||||| ||||  ||||||| || |||||||| || || ||||||||||| ||||    
T  26331939 tttcgtatatatgcggaacatccaaacaaacactcatgtatcaaatacaatcttctacaaacgaatcaaaaacacccaccac 26331858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 440 - 565
Target Start/End: Complemental strand, 42269178 - 42269053
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||||| |||||| |    
T  42269178 gcctgagcaatagtagaaacaagtcttgtgccaaactgttgcaaaacccatccaaaataaccatcaatcctaccaaaaactcgggtaaccgcactttgct 42269079  T
Q  540 tctcttttgcagttcagcgaagttaa 565  Q
    |||||| ||||||| |||| ||||||    
T  42269078 tctcttctgcagttgagcgtagttaa 42269053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 217 - 359
Target Start/End: Complemental strand, 26331666 - 26331524
Alignment:
Q  217 aaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaac 316  Q
    |||||||| ||||||| |||||||||| | ||||| |||| ||||  || |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  26331666 aaagaatcctagcaagcacaaggaatgctaggctaggagatttaaaaagcaacatacaaaggaaaagtgtttcgtatatatgcggaacatccaaacaaac 26331567  T
Q  317 acccatgattcaaatataaacttctacatacaaaccaaaaaca 359  Q
    || ||||  ||||||| || |||||||| || || ||||||||    
T  26331566 actcatgtatcaaatacaatcttctacaaacgaatcaaaaaca 26331524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 440 - 614
Target Start/End: Complemental strand, 40600257 - 40600094
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    |||| |||||||||| |||||||||||||| ||||| |||||||||||  || |||||||| ||||| |||||||||||||||| |||| | |||||| |    
T  40600257 gcctaagcaatagcaaaaacaagtcttgtgccaaaccgttgcaaaacccgtccaaaataaccatcaaacctaccaaaaactcgtataactgcactttgct 40600158  T
Q  540 tctcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaacccc 614  Q
    |||||| |||||||            ||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  40600157 tctcttctgcagtt-----------gagcgcagttaagcactggtaaaatcaccacctaagtatttgaaaacccc 40600094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 186 - 364
Target Start/End: Original strand, 12155740 - 12155919
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaa-gtaggaacatacaaaggaaaagt 284  Q
    |||||||||||||||| |||||| || | | |||||||| |||| |  |||||||||| | | ||| ||  ||||| |||| ||||||||||| ||||||    
T  12155740 aagaagctaaaatgaaatttattcaaaatgcaaagaatcctagcgatcacaaggaatgctagactaggaatcttaaagtagcaacatacaaagaaaaagt 12155839  T
Q  285 gtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    | | ||||| |||||||||||| ||||||||||  |||   ||||||||||||||||||| |||||||||||| ||||||    
T  12155840 gcgccgtatgtatgcggaacactcaaacaaacaatcatacatcaaatataaacttctacaaacaaaccaaaaataccctc 12155919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 186 - 376
Target Start/End: Complemental strand, 34574764 - 34574574
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||| || |||| | || |||||||||||| || | || || || |||| | | ||| || |||||| ||| ||||||||||| |||||||    
T  34574764 aagaagttaaaataaaatttactcaaaacgtaaagaatcctatctagcacgagtaatgctagactaggatacttaaatagcaacatacaaagaaaaagtg 34574665  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    |||||||||||  |||||||| ||| ||||||| |||   ||||||  ||||||||| | |||||||||||||| |||||||||| |||||    
T  34574664 tgtcgtatatacacggaacactcaagcaaacactcatacatcaaatgcaaacttctaaaaacaaaccaaaaacaacctccactgagggccc 34574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 40680507 - 40680683
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||   |||| || ||||||| |||||||||| | || || |||||||||  || |||||||||||||||||||    
T  40680507 aagaaggtaaaatgaaatttatttaaaacactaagattc-tagcaagcacaaggaatgctaggttaagagacttaaaaagcaacatacaaaggaaaagtg 40680605  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    || |||||||||||||            |||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  40680606 tgccgtatatatgcgg------------aacacccatg-tacaaatacaaacttctacaaacaaaccaaaaacaccctccactgagggccc 40680683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 322
Target Start/End: Complemental strand, 24867687 - 24867553
Alignment:
Q  188 gaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtg 287  Q
    |||| ||||||||| ||||||||| ||  |||||||  ||||||| |||||||||||| || ||  ||||||||  || | | ||||||| |||| ||||    
T  24867687 gaagttaaaatgaaatttatttaaaacacaaagaatactagcaagcacaaggaatgataggttagaagacttaaaaagcagcgtacaaagaaaaaatgtg 24867588  T
Q  288 tcgtatatatgcggaacacccaaacaaacacccat 322  Q
    |||| ||||||||||||| ||||||||||||||||    
T  24867587 tcgtgtatatgcggaacatccaaacaaacacccat 24867553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 368
Target Start/End: Original strand, 30248221 - 30248337
Alignment:
Q  248 gctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatac 347  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |    ||| ||| ||||| ||||||||||| |||   ||||||| |||| |||||| ||    
T  30248221 gctatgagacttaaatagcaacatacaaagaaaaagtgtgcc----atacgcgaaacactcaaacaaacactcatatatcaaatacaaacgtctacaaac 30248316  T
Q  348 aaaccaaaaacaccctccact 368  Q
    |||||||||||||||||||||    
T  30248317 aaaccaaaaacaccctccact 30248337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 456 - 550
Target Start/End: Original strand, 11470623 - 11470717
Alignment:
Q  456 aaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctcttttgca 550  Q
    |||||| ||||||| ||||| |||||||||||  |  |||||| ||||||| ||||||||||||||||||||||  || ||||||||||||||||    
T  11470623 aaacaaatcttgtgccaaaccgttgcaaaaccccttcaaaatagctatcaaacctaccaaaaactcgtgtaaccacacattgtttctcttttgca 11470717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 42220945 - 42221103
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| || ||| || ||| |||||||| |||| || || ||||| | | ||||| ||||||||| ||| |||||||||||||||| ||    
T  42220945 aagaagctaaaatgaaattaattcaaaacgcaaagaatcctagctagcacgaggaaggctaggctaggagacttaaatagcaacatacaaaggaaaaatg 42221044  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctaca 344  Q
    |  | ||| ||||||||||||  |||||||||| |||   ||||||| |||||| ||||    
T  42221045 taccatatgtatgcggaacactaaaacaaacactcatacatcaaataaaaacttttaca 42221103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 367
Target Start/End: Original strand, 11470431 - 11470531
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    ||||||||||||||||||||||||||||||| | || || | ||||||||| | |    | ||||| ||||||||||| |||||||||||||||||||||    
T  11470431 aacatacaaaggaaaagtgtgtcgtatatatacagagcatctaaacaaacatctaaatattaaatacaaacttctacaaacaaaccaaaaacaccctcca 11470530  T
Q  367 c 367  Q
    |    
T  11470531 c 11470531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 558
Target Start/End: Original strand, 12156021 - 12156133
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| |||||||||||||  ||||||||||  || |||||||| ||||| ||||||||||||||| |||| || || ||| |||||||    
T  12156021 gcaatagcagaaacaaatcttgtgtcaaaccattgcaaaacccctccaaaataaccatcaaacctaccaaaaactcgcgtaatcgcaccttgcttctctt 12156120  T
Q  546 ttgcagttcagcg 558  Q
      |||||| ||||    
T  12156121 cagcagttgagcg 12156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 376
Target Start/End: Complemental strand, 23247288 - 23247164
Alignment:
Q  248 gctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatac 347  Q
    |||| |||| |||| ||| |||||||||| |||||||||||||||     ||| ||||| ||||||||||| |||   ||||||| |||| |||||| ||    
T  23247288 gctaagagatttaaatagtaacatacaaaagaaaagtgtgtcgtac----gcgaaacactcaaacaaacactcatacatcaaatacaaacgtctacaaac 23247193  T
Q  348 aaaccaaaaacaccctccactgaaggccc 376  Q
    |||||||||||| ||||||| || |||||    
T  23247192 aaaccaaaaacatcctccaccgagggccc 23247164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 558
Target Start/End: Original strand, 30248416 - 30248481
Alignment:
Q  493 aaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctcttttgcagttcagcg 558  Q
    ||||||||  |||| ||||||||||| ||||| |||||||| ||| ||||||| ||||||| ||||    
T  30248416 aaaataaccttcaaacctaccaaaaaatcgtgcaaccgtaccttgcttctcttctgcagttgagcg 30248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 26331780 - 26331696
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccg 530  Q
    |||||||||||||||| ||||||   |||  |||| ||||| | || |||||||  ||||| |||||||||||||| ||||||||    
T  26331780 gcaatagcataaacaaatcttgtacgaaatcgttgaaaaacatctctaaaataatcatcaaacctaccaaaaactcatgtaaccg 26331696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 553
Target Start/End: Original strand, 42221198 - 42221258
Alignment:
Q  493 aaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctcttttgcagtt 553  Q
    |||||||||||||| ||||||||||||| ||| ||||| || ||| ||||| | |||||||    
T  42221198 aaaataactatcaaacctaccaaaaacttgtgcaaccgcaccttgcttctcatctgcagtt 42221258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 6e-51; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 186 - 368
Target Start/End: Original strand, 10494319 - 10494501
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| |||||| || ||| |||||||| ||||||| ||||||||||  |||||| ||||||||| ||| |||||||||||||||||||    
T  10494319 aagaagctaaaatgaaatttattcaaaacgcaaagaatcctagcaagcacaaggaatgtctggctaggagacttaaatagcaacatacaaaggaaaagtg 10494418  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccact 368  Q
    ||| |||||||||| |||||||||||||||||| |||   ||||||| ||||||||||| |||||||||||| ||||||||||    
T  10494419 tgttgtatatatgcagaacacccaaacaaacactcatacatcaaatacaaacttctacaaacaaaccaaaaataccctccact 10494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 186 - 377
Target Start/End: Complemental strand, 2078054 - 2077858
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||||||||||||| || | | |||||||| ||||||  | |||||||| ||||||| ||||||||||||||||||| |||||||||| ||    
T  2078054 aagaaggtaaaatgaagtttattcaaaatgcaaagaatcctagcaaacataaggaatgcttggctaggagacttaagtaggaacatgcaaaggaaaactg 2077955  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaata-----taaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    |||||||||||||||||| ||||||||||||||||||   |||||||     |||||||||||| |||||||||||||||||| |||| | ||||||    
T  2077954 tgtcgtatatatgcggaaaacccaaacaaacacccattcatcaaatacaaattaaacttctacaaacaaaccaaaaacacccttcactaagggcccc 2077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 367
Target Start/End: Original strand, 25537235 - 25537417
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtagg-aacatacaaaggaaaagt 284  Q
    |||||||||||||||  ||||||||| | | |||||||| ||||||| |||| ||||| | ||||| |||||||||  |   |||||||| |||||||||    
T  25537235 aagaagctaaaatgatatttatttaacatgcaaagaatcctagcaagcacaaagaatgctaggctaggagacttaaaaaaacaacatacacaggaaaagt 25537334  T
Q  285 gtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccac 367  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| |||||||||||||||| |||||    
T  25537335 gtgtcgtatatatgcggaacacacaaacaaacacccatgtatcaaatacaaacttctacaaacaaaccaaaaacaccttccac 25537417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 364
Target Start/End: Complemental strand, 14351853 - 14351674
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaa-gtaggaacatacaaaggaaaagt 284  Q
    |||||||||||||||| |||||| || | | |||||||| |||| || |||||||||| | | ||| ||  ||||| |||| ||||||||||||||||||    
T  14351853 aagaagctaaaatgaaatttattcaaaatgcaaagaatcctagcgagcacaaggaatgctagactaggaatcttaaagtagcaacatacaaaggaaaagt 14351754  T
Q  285 gtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||| |||||| ||||| ||||||    
T  14351753 gtgtcgtatatatgcggaacacccaaacaaacaaccatacatcaaatataaacttctacaaacaaactaaaaataccctc 14351674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 186 - 376
Target Start/End: Complemental strand, 27787360 - 27787171
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| |||||||||  |  |||||||| ||||||| |||||||||| |  |||| |||||||||  |  |||||||||| ||||||||    
T  27787360 aagaagctaaaatgaaatttatttaaagcacaaagaatcttagcaagcacaaggaatgctaagctaggagacttaaagaacaacatacaaacgaaaagtg 27787261  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    |  | ||||||||||||||||||||||||||| |||||  ||||||| |||||||||||  |||| ||||||||||||||||||| |||||    
T  27787260 tc-catatatatgcggaacacccaaacaaacagccatgtatcaaatacaaacttctacaagcaaatcaaaaacaccctccactgagggccc 27787171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 29099063 - 29099251
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||  |||||||| ||||||| |||||||| | | ||||| |||||||||  |  |||||||| |   ||||||    
T  29099063 aagaagttaaaatgaaatttatttaaaacacaaagaatcctagcaagcacaaggaacgctaggctaggagacttaaaaaacaacatacacac--aaagtg 29099160  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    || |||||||||||||||||   |||||||||| ||||  ||||||| ||||||||||  ||||||||||||||||||||||||| |||||    
T  29099161 tgccgtatatatgcggaacatataaacaaacactcatgtatcaaatacaaacttctacgaacaaaccaaaaacaccctccactgagggccc 29099251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 186 - 363
Target Start/End: Original strand, 8038864 - 8039040
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||  ||| |||| ||||||| |||||||||| |  ||||  ||||||||  |  | |||| ||||||||||||    
T  8038864 aagaagctaaaatgaaatttatttaaaacacaaaaaatcctagcaagcacaaggaatgctaagctagaagacttaaagaacaccatataaaggaaaagtg 8038963  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccct 363  Q
    | | ||||||||||||||||||||||||||||| ||||  |||||||||||||| |||   || ||||||||||||||    
T  8038964 tat-gtatatatgcggaacacccaaacaaacactcatgcatcaaatataaacttttacgagcagaccaaaaacaccct 8039040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 442 - 614
Target Start/End: Complemental strand, 2077793 - 2077631
Alignment:
Q  442 ctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttc 541  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||| ||| |||||||  ||||| |||||| ||||||| |||||||| |||||  ||     
T  2077793 ctgagcaatagcataaacaagtcttgtgcaaaaccgttgcaaaacccatccaaaataatcatcaaacctacc-aaaactcctgtaaccgcactttacttt 2077695  T
Q  542 tcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaacccc 614  Q
    |||| |||||||||||         ||||| || |||| ||||||||| ||||||||||||||||||||||||    
T  2077694 tcttctgcagttcagc---------gcgcaattaagcataggtaaaatcaccacctaagtatttgaaaacccc 2077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 189 - 320
Target Start/End: Original strand, 11814175 - 11814306
Alignment:
Q  189 aagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgt 288  Q
    ||||||||||||| |||||| || ||| |||||||| || |||| | |||||| | ||||||| ||||||||| ||| |||||||||||||| | ||||     
T  11814175 aagctaaaatgaaatttattcaaaacgcaaagaatcctaacaagcagaaggaaagcttggctaggagacttaaatagcaacatacaaaggaacattgtgc 11814274  T
Q  289 cgtatatatgcggaacacccaaacaaacaccc 320  Q
    | |||||||||| |||||||||||||||||||    
T  11814275 cttatatatgcgaaacacccaaacaaacaccc 11814306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 186 - 366
Target Start/End: Original strand, 47896349 - 47896529
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagt-aggaacatacaaaggaaaagt 284  Q
    |||||| ||||||||| ||||||||| |   |||||||| ||||||| | |||||||| |  | ||  ||||||||   || ||||||||||| ||||||    
T  47896349 aagaagttaaaatgaaatttatttaaaatacaaagaatcctagcaagcataaggaatgttaagttagaagacttaaaagagcaacatacaaagaaaaagt 47896448  T
Q  285 gtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    ||  ||||||||||||||||| |||||||||||||||||  |||||||||||||| |||   ||||||||||||||||||||    
T  47896449 gtc-cgtatatatgcggaacatccaaacaaacacccatgtatcaaatataaacttttacgagcaaaccaaaaacaccctcca 47896529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 15495508 - 15495631
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||   ||||||| ||||| | ||||| |||| | ||||| |||||||||  || |||||||||||||||||||    
T  15495508 aagaagctaaaatgaaatttatttaaaacactaagaatcatagcatgcacaagaaatgctaggctaggagacttaaaaagcaacatacaaaggaaaagtg 15495607  T
Q  286 tgtcgtatatatgcggaacaccca 309  Q
    || | |||||||||||||||||||    
T  15495608 tgccttatatatgcggaacaccca 15495631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 10494579 - 10494698
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| ||||||| |||||  ||||||||||  |  |||||||| ||||| |||||||||||  |||||||||| ||||| ||||||||    
T  10494579 gcaatagcagaaacaaatcttgtgccaaaccattgcaaaacccctataaaataaccatcaaacctaccaaaaatccgtgtaaccgcactttctttctctt 10494678  T
Q  546 ttgcagttcagcgaagttaa 565  Q
     ||||||| |||| ||||||    
T  10494679 ctgcagttgagcgtagttaa 10494698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 336
Target Start/End: Complemental strand, 4654289 - 4654140
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    ||||||||||||||||  |||||||| ||  |||||||| ||||||| ||| |||||| |  ||||  ||||||||  || |||||||||||| ||||||    
T  4654289 aagaagctaaaatgaaaattatttaaaacacaaagaatcctagcaagcacagggaatgctaagctagaagacttaaagagcaacatacaaagggaaagtg 4654190  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaa 336  Q
    | || |||||||| ||||||| |||| |||||| ||||  |||||||||||    
T  4654189 tctc-tatatatgtggaacactcaaataaacactcatgtatcaaatataaa 4654140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 558
Target Start/End: Complemental strand, 14351573 - 14351461
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| ||||||| |||||  ||||||||||  || |||||||| ||||| ||||||||||||||| |||| || || ||| |||||||    
T  14351573 gcaatagcagaaacaaatcttgtgccaaaccattgcaaaacccctccaaaataaccatcaaacctaccaaaaactcgcgtaatcgcacattgcttctctt 14351474  T
Q  546 ttgcagttcagcg 558  Q
      |||||| ||||    
T  14351473 cagcagttgagcg 14351461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 26842410 - 26842372
Alignment:
Q  326 tcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  26842410 tcaaatataaacttctacaaacaaaccaaaaacaccctc 26842372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 40581171 - 40581114
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatg 243  Q
    |||||||||||||||| ||||||||| ||  |||||||| ||||||| ||||||||||    
T  40581171 aagaagctaaaatgaaatttatttaaaacacaaagaatcttagcaagcacaaggaatg 40581114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 530
Target Start/End: Original strand, 25537495 - 25537575
Alignment:
Q  448 aatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccg 530  Q
    ||||||| |||||| |||||||||| || |||| ||||||| || ||  |||| ||||| |||||||||||||| ||||||||    
T  25537495 aatagcagaaacaaatcttgtgtcataccgttgaaaaacctctccaa--taaccatcaaacctaccaaaaactcatgtaaccg 25537575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 334 - 376
Target Start/End: Original strand, 15495643 - 15495685
Alignment:
Q  334 aaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||    
T  15495643 aaacttctacaaacaaatcaaaaacaccctccactgagggccc 15495685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 26842336 - 26842258
Alignment:
Q  441 cctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaac 519  Q
    |||| ||||||| | |||||| |||||||||| || |||| ||||||| || ||| |||| ||||| ||||||||||||    
T  26842336 cctgcgcaataggagaaacaaatcttgtgtcataccgttgaaaaacctctccaaactaaccatcaaacctaccaaaaac 26842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 26842701 - 26842787
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacataca 274  Q
    |||||||||||||||| ||||||||| ||  | |||||| ||||||| |||||||||| | || || |||||||||  || ||||||||    
T  26842701 aagaagctaaaatgaaatttatttaaaac--acagaatcctagcaagcacaaggaatgctaggttaggagacttaaaaagcaacataca 26842787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 9e-47; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 186 - 377
Target Start/End: Original strand, 5514803 - 5514993
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||||||||||||| || ||| ||||||||  |||||| |||| ||||| ||  ||| ||||||||||||||||||||||||| || ||||    
T  5514803 aagaaggtaaaatgaagtttattcaaaacgcaaagaatctaagcaagcacaaagaatgcttaactaggagacttaagtaggaacatacaaagaaagagtg 5514902  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    |||||||||||||||||||||||||||||| | |||||  ||||| | ||||||||||| | ||||||||||||||||||||||| ||||||    
T  5514903 tgtcgtatatatgcggaacacccaaacaaagatccatgcgtcaaa-acaaacttctacaaataaaccaaaaacaccctccactgagggcccc 5514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 186 - 363
Target Start/End: Complemental strand, 15050658 - 15050481
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| | | |||||||  ||||||| |||||||||| | ||||| |||| ||||  |  |||||||| ||||||||||    
T  15050658 aagaagctaaaatgaaatttatttaacatgcaaagaattctagcaagcacaaggaatgctaggctaggagaattaaaaaacaacatacacaggaaaagtg 15050559  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccct 363  Q
    || |||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  15050558 tgccgtatatatgcggaacacacaaacaaacacccatgtatcaaatacaaacttctacaaacaaaccaaaaacaccct 15050481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 441 - 611
Target Start/End: Complemental strand, 3763363 - 3763193
Alignment:
Q  441 cctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgttt 540  Q
    |||||||||||||| |||||||||||||| |||||  |||||||||  ||| |||||||  ||||||||||||||||||  || |||| | |||||  ||    
T  3763363 cctgagcaatagcagaaacaagtcttgtgccaaaccattgcaaaactcatccaaaataatcatcaatcctaccaaaaacctgtataactgcacttttctt 3763264  T
Q  541 ctcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaac 611  Q
    ||||| ||||||| |||  ||||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  3763263 ctcttctgcagttgagcatagttaaagcgcagttaagcacaggtaaactcaccacgtaagtatttgaaaac 3763193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 440 - 613
Target Start/End: Original strand, 5515056 - 5515218
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||||||| || ||||||| |||||| |    
T  5515056 gcctgagcaatagtagaaacaagtcttgtgccaaactgttgcaaaatccatccaaaataaccatcaatcctaccaaaaacccgggtaaccgcactttgct 5515155  T
Q  540 tctcttttgcagttcagcgaagttaaagcgcagttcagcacaggtaaaattaccacctaagtatttgaaaaccc 613  Q
    |||||| |||||||            ||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  5515156 tctcttctgcagtt-----------gagcgcagttaagcacaagtaaaatcaccacctaagtatttgaaaaccc 5515218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 269 - 367
Target Start/End: Complemental strand, 39580589 - 39580491
Alignment:
Q  269 catacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccac 367  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||||||||  |||||||||||| | |||||||    
T  39580589 catacataggaaaagtgtgtcgtatatatgcggaacacacaaacaaacactcatgtatcaaatacaaacttctactaacaaaccaaaaatagcctccac 39580491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 186 - 376
Target Start/End: Original strand, 10181587 - 10181776
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| |||||| || ||  |||||||| || |||||| ||| |||| |  |||| |||||||||  || ||||||||||||| |||||    
T  10181587 aagaagctaaaatgaaatttattgaaaacacaaagaatcctaacaagtataagaaatgttaagctaagagacttaaa-agcaacatacaaaggagaagtg 10181685  T
Q  286 tgtcgtatatatgcggaacacccaaa-caaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    | | |||||||||||||||| ||||| |||||||  |||  ||||| | |||||||||||  ||||||||||||||||||||| || |||||    
T  10181686 tct-gtatatatgcggaacatccaaaacaaacacatatgtatcaaaaacaaacttctacaagcaaaccaaaaacaccctccaccgagggccc 10181776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 366
Target Start/End: Original strand, 38498866 - 38499043
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||  |||||||| ||||||| ||| |||||| |  || || ||||||||  || |||||||||||||||||||    
T  38498866 aagaagttaaaatgaaatttatttaaaacacaaagaatcctagcaagcacagggaatgttaagccataagacttaaagagcaacatacaaaggaaaagtg 38498965  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    |  ||   ||||||||||||||||||||||||||||||  || ||||||||||| ||     |||||||||||||||||||    
T  38498966 t-ccg--catatgcggaacacccaaacaaacacccatgtatcgaatataaacttttatgagtaaaccaaaaacaccctcca 38499043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 25142524 - 25142656
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| |||||| || || ||||||||| || | || | |||||||| | | ||| || |||||| ||  |||| ||||||||||||||    
T  25142524 aagaagctaaaatgaaatttattcaaaacataaagaatcttatctagcataaggaatgctagactaagatacttaaataacaacaaacaaaggaaaagtg 25142623  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacac 318  Q
    ||||||||||   |||||||| |||||||||||    
T  25142624 tgtcgtatatccacggaacactcaaacaaacac 25142656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 3763503 - 3763436
Alignment:
Q  300 ggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccac 367  Q
    |||||||||||||||||||  ||   ||||||  ||||||||||||| ||||||||||||||||||||    
T  3763503 ggaacacccaaacaaacacttatatatcaaattcaaacttctacatataaaccaaaaacaccctccac 3763436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 505
Target Start/End: Complemental strand, 39580412 - 39580354
Alignment:
Q  447 caatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatca 505  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||| |||||||| ||||    
T  39580412 caatagcataaacaaatcttgtgtcaaaccgttgaaaaatctatccaaaataaccatca 39580354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 15050399 - 15050317
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccg 530  Q
    ||||||||| |||||| |||||||||| || |||| ||||||| || ||  |||| ||||| |||||||||||||| ||||||||    
T  15050399 gcaatagcagaaacaaatcttgtgtcataccgttgaaaaacctctccaa--taaccatcaaacctaccaaaaactcatgtaaccg 15050317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 9e-47; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 186 - 377
Target Start/End: Complemental strand, 43048319 - 43048128
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||||||||||||| || |  ||||||||| || |||  |||||||||| |||| || |||||||||||||||||||||||||||||| ||    
T  43048319 aagaagttaaaatgaagtttattcaaaatataaagaatcctaacaaacacaaggaatgcttggttaggagacttaagtaggaacatacaaaggaaaaatg 43048220  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    |||||||||||||  |||||| ||||||||||  ||||  ||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  43048219 tgtcgtatatatgtagaacactcaaacaaacaatcatgcatcaaatacaaacttctacaaacaaaccaaaaacaccctctactgagggcccc 43048128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 24717541 - 24717669
Alignment:
Q  189 aagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgt 288  Q
    |||||||||||||||||||| || ||| |||||||| ||||||| |||||||||| || ||||||||||||||||||||| |||||||| |||||||||     
T  24717541 aagctaaaatgaagtttattcaaaacgcaaagaatcttagcaagcacaaggaatgcttagctatgagacttaagtaggaagatacaaagaaaaagtgtga 24717640  T
Q  289 cgtatatatgcggaacacccaaacaaaca 317  Q
     ||||||||||||||||||||||||||||    
T  24717641 tgtatatatgcggaacacccaaacaaaca 24717669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 31038620 - 31038752
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| |||||||||||| || | || |||||||||| | ||||| || |||||| ||| |||||||||||||||||||    
T  31038620 aagaagctaaaatgaaatttatttaaaacgtaaagaatcttatctagcacaaggaatgctaggctaagatacttaaatagcaacatacaaaggaaaagtg 31038719  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacac 318  Q
    |||||||||||  |||||||| |||||||||||    
T  31038720 tgtcgtatatacacggaacactcaaacaaacac 31038752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 21591148 - 21590967
Alignment:
Q  193 taaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgta 292  Q
    ||||||||| ||||||||| ||  |||||||  ||||||| |||||||||| |  | || |||||||||  |  |||||||||  |||||||||||||||    
T  21591148 taaaatgaaatttatttaaaacacaaagaattctagcaagcacaaggaatgctaagttaggagacttaaaaa--aacatacaagagaaaagtgtgtcgta 21591051  T
Q  293 tatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    ||||||| ||||||||||||||||  |||||  ||||||| |||||| |||| |||||||||||||||||||||| ||| ||||    
T  21591050 tatatgcagaacacccaaacaaacctccatgtatcaaatacaaacttttacaaacaaaccaaaaacaccctccaccgaaagccc 21590967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 24717782 - 24717907
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    ||||||||||||| | |||||||||||||| ||||| ||||||||||| ||| |||||||| |||||||||||||||||  |  ||||||| |||||| |    
T  24717782 gcctgagcaatagtagaaacaagtcttgtgccaaacagttgcaaaacccatccaaaataaccatcaatcctaccaaaaaaccaggtaaccgcactttgct 24717881  T
Q  540 tctcttttgcagttcagcgaagttaa 565  Q
    |||||||||||||| |||| ||||||    
T  24717882 tctcttttgcagttgagcgcagttaa 24717907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 565
Target Start/End: Complemental strand, 43048061 - 43047940
Alignment:
Q  444 gagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctc 543  Q
    |||||||||||||||||| |||||||| |||| ||||||||| | ||| |||||||| ||||| |||||||||||   ||||||||| ||||||||||||    
T  43048061 gagcaatagcataaacaaatcttgtgtaaaaccgttgcaaaatccatccaaaataaccatcaaacctaccaaaaatctgtgtaaccgcactttgtttctc 43047962  T
Q  544 ttttgcagttcagcgaagttaa 565  Q
    || ||||||| |||| ||||||    
T  43047961 ttctgcagttgagcgcagttaa 43047940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 186 - 366
Target Start/End: Complemental strand, 34294025 - 34293848
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||  | |||||| ||||||| ||||  |||| |  ||||  ||||| ||  || | |||||||||||||||||    
T  34294025 aagaagctaaaatgaaatttatttaaaac--acagaatcctagcaagcacaaaaaatgttaagctagaagactgaaagagcaccatacaaaggaaaagtg 34293928  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    |  ||||||||||||||| || ||||||||||||||||  |||||||||||||| ||||   |||||||||||||||||||    
T  34293927 tc-cgtatatatgcggaatactcaaacaaacacccatgtatcaaatataaacttttacaagtaaaccaaaaacaccctcca 34293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 366
Target Start/End: Original strand, 10365418 - 10365597
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||  |||||||| ||||||| |||| ||||| |  ||||  ||||||||  || | |||| || |||||||||    
T  10365418 aagaagctaaaatgaaatttatttaaaacacaaagaatcctagcaagcacaaagaatgctaagctagaagacttaaagagcaccatagaagggaaaagtg 10365517  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
      | ||||||||| | |||| |||||||||||| ||||  |||||||||||||| |||   ||||||||||||||||||||    
T  10365518 act-gtatatatgtgcaacagccaaacaaacactcatgtatcaaatataaacttttacgagcaaaccaaaaacaccctcca 10365597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 186 - 370
Target Start/End: Original strand, 32978745 - 32978926
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| |||| |||| ||  | |||||| ||||||| | |||||||  |  ||||||||||||||  || |||||| ||| ||||||||    
T  32978745 aagaagttaaaatgaaatttaattaaaac--acagaatcctagcaagcataaggaatattaagctatgagacttaaagagtaacatataaaagaaaagtg 32978842  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactga 370  Q
    | | || |||||||||| || |||||||||||| ||||  ||||| | |||||||||||  ||||  ||||||||||||||||||    
T  32978843 tct-gtttatatgcggatcatccaaacaaacactcatgtatcaaaaacaaacttctacaagcaaataaaaaacaccctccactga 32978926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 7437050 - 7437109
Alignment:
Q  247 ggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacac 306  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||||    
T  7437050 ggctaggagacttaaatagcaacatacaaagaaaaagtgtaccgtatatatgcggaacac 7437109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 186 - 365
Target Start/End: Complemental strand, 56092924 - 56092745
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| | | |||||||| ||||||| |||||||||| | ||||| |||| ||||  |  || ||||| ||||||||||    
T  56092924 aagaagctaaaatgaaatttatttaacatgcaaagaatcctagcaagcacaaggaatgctaggctaggagaattaaaaaacaatatacacaggaaaagtg 56092825  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcc 365  Q
    ||||||||||||||||||||| |||||||||| |||||  ||||||| ||||||||||| ||||||||||||||||||||    
T  56092824 tgtcgtatatatgcggaacacacaaacaaacatccatgtatcaaatacaaacttctacaaacaaaccaaaaacaccctcc 56092745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 186 - 370
Target Start/End: Original strand, 12130141 - 12130324
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| | ||||||| ||   ||||||| ||||| | | |||||||| | ||||| |||||||||  || | |||||| | ||||||||    
T  12130141 aagaagctaaaatgaaatctatttaaaacactaagaatcctagcatgcagaaggaatgctaggctaggagacttaaaaagcatcatacagaagaaaagtg 12130240  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactga 370  Q
    ||  |||||||||||||||||||||||||||||||||| | |||||| |||||| |||| ||||||||||||||| |||||||||    
T  12130241 tgatgtatatatgcggaacacccaaacaaacacccatg-tacaaatagaaacttttacaaacaaaccaaaaacactctccactga 12130324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 267 - 364
Target Start/End: Original strand, 52635217 - 52635314
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||   ||||||||||||||||| | |||||||||||||||||||    
T  52635217 aacatacaaagaaaaagtgtgtcgtgtatatgcggaacacccaaacaaacaaccatacatcaaatataaacttctagaaacaaaccaaaaacaccctc 52635314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 219 - 370
Target Start/End: Complemental strand, 42678187 - 42678037
Alignment:
Q  219 agaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacac 318  Q
    |||||| ||||||| || || |||| | ||||| |||||||||  || |||||| ||||||||||||| ||||||||||| ||||||||||||||||||     
T  42678187 agaatcctagcaagcacgagaaatgctaggctaggagacttaaaaagtaacataaaaaggaaaagtgtctcgtatatatgtggaacacccaaacaaaca- 42678089  T
Q  319 ccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactga 370  Q
     ||||  ||||||| ||||||||||| ||||||||||||||| | |||||||    
T  42678088 tcatgcatcaaatacaaacttctacaaacaaaccaaaaacacacaccactga 42678037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 370
Target Start/End: Original strand, 45872656 - 45872832
Alignment:
Q  193 taaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtgtgtcgta 292  Q
    ||||||||| ||||||||| ||  | | |||| ||||||| |||||||||  | |||||||||||||||  |  ||||||||||| ||||||||  ||||    
T  45872656 taaaatgaaatttatttaaaacacatataatcctagcaagcacaaggaatactaggctatgagacttaaaaaacaacatacaaagaaaaagtgttccgta 45872755  T
Q  293 tatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactga 370  Q
    |||||||||||||||||||||||||| ||    ||||||| ||||||||||| | |||||||||| || | |||||||    
T  45872756 tatatgcggaacacccaaacaaacactcacatatcaaatacaaacttctaca-aaaaaccaaaaatactcaccactga 45872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 55728214 - 55728316
Alignment:
Q  260 aagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaac-acccatgattcaaatataaacttctacatacaaaccaaaaac 358  Q
    |||||| ||||||||||||||| |||| |||| |||||||||||| ||||||||||| ||||||   ||||||||||||||||||| |||||| ||||||    
T  55728214 aagtagcaacatacaaaggaaaggtgtatcgtgtatatgcggaacgcccaaacaaacaacccatacatcaaatataaacttctacaaacaaactaaaaac 55728313  T
Q  359 acc 361  Q
    |||    
T  55728314 acc 55728316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 366
Target Start/End: Original strand, 14440735 - 14440905
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||||||||||||| ||||||||| ||   ||||||| || |||| ||||| |||| | | ||| |||||||||  |  || |||| ||||||||||     
T  14440735 aagaagctaaaatgaaatttatttaaaacactaagaatcctaacaagcacaagaaatgttagactaggagacttaaaaaacaatatactaaggaaaagtt 14440834  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    ||||||||||||||||||||||||||||||     ||     ||||| ||||||||||| |||||||||||||||||||||    
T  14440835 tgtcgtatatatgcggaacacccaaacaaa-----at-----aaatacaaacttctacaaacaaaccaaaaacaccctcca 14440905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 44496497 - 44496600
Alignment:
Q  253 gagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaacc 352  Q
    ||||||||| ||| ||||||||||| ||||||||||||  |||| ||||||||| |||||| ||||||||   ||||||| |||||| |||| ||||| |    
T  44496497 gagacttaaatagcaacatacaaagaaaaagtgtgtcg--tatacgcggaacactcaaacagacacccatatatcaaatacaaacttttacaaacaaatc 44496594  T
Q  353 aaaaac 358  Q
    ||||||    
T  44496595 aaaaac 44496600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 377
Target Start/End: Complemental strand, 19676274 - 19676083
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||| | || ||| || |||||||||||| || | || |||||||||| | |||||  | |||||| ||| ||||||||||  |||||||    
T  19676274 aagaagttaaaatggaattgattcaaaacgtaaagaatcctatctagcacaaggaatgttaggctaaaatacttaaatagcaacatacaaaaaaaaagtg 19676175  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaacca-aaaacaccctccactgaaggcccc 377  Q
    || || |||||  |||||||| ||||||||||| |||   ||||||  |||||| || | |||||||| |||||| |||||||| ||||||||    
T  19676174 tgccgaatatacacggaacactcaaacaaacactcatacatcaaatgcaaacttgtaaaaacaaaccaaaaaacaacctccact-aaggcccc 19676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 527
Target Start/End: Original strand, 52635427 - 52635506
Alignment:
Q  447 caatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaa 527  Q
    |||||||| |||||| ||||||| ||||  ||||||||| |  || |||||||| ||||| ||||||||||||||||||||    
T  52635427 caatagcagaaacaaatcttgtgccaaatcgttgcaaaatcc-tccaaaataaccatcaaacctaccaaaaactcgtgtaa 52635506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 91; Significance: 9e-44; HSPs: 2)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 186 - 377
Target Start/End: Complemental strand, 3030 - 2844
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||||| |||||||||| |   |||||||| ||||||| |||||||||| ||||||| |||||||||||||||||||| ||| ||||||||    
T  3030 aagaagataaaatgaggtttatttaaaagacaaagaatcctagcaagcacaaggaatgtttggctaggagacttaagtaggaacatataaaagaaaagtg 2931  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcccc 377  Q
    ||||||||||||| ||||||||||||||    | ||||  ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||    
T  2930 tgtcgtatatatgtggaacacccaaaca----ctcatgcatcaaatacaaacttctacaaacaaacctaaaacaccctccact-aaggcccc 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 440 - 558
Target Start/End: Complemental strand, 2780 - 2662
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtt 539  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||| || ||| |||||||  |||||||||||||||||||| |||||||| |||||| |    
T  2780 gcctgagcaatagcagaaacaagtcttgtgccaaaccgttgcaaatcccatctaaaataatcatcaatcctaccaaaaactcatgtaaccgcactttgct 2681  T
Q  540 tctcttttgcagttcagcg 558  Q
    |||||| ||||||||||||    
T  2680 tctcttctgcagttcagcg 2662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 8e-35; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 186 - 305
Target Start/End: Original strand, 78406 - 78525
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||||| ||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  78406 aagaagctaaaatgaagtttattcaaaacgcaaagaatcctagcaagcacaagaaatgcttggctaggagacttaaataggaacatacaaaggaaaagtg 78505  T
Q  286 tgtcgtatatatgcggaaca 305  Q
     | |||||||||||||||||    
T  78506 agccgtatatatgcggaaca 78525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 186 - 375
Target Start/End: Original strand, 10772384 - 10772566
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| |||||||||||| ||| || ||| |||  ||| | ||||| |||||||||| ||||||| ||||||     |||||| |||||||||||||||    
T  10772384 aagaagttaaaatgaagttaattcaaaacgcaaaatatccttgcaagcacaaggaatgcttggctaggagact-----aggaacgtacaaaggaaaagtg 10772478  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctccactgaaggcc 375  Q
    || |||||||||||||||||  || |||||||| ||||   |||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  10772479 tgccgtatatatgcggaaca--cacacaaacactcatgcagcaaatacaaacttctacaaataaaccaaaaacaccctccactgagggcc 10772566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 366
Target Start/End: Original strand, 11366388 - 11366565
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| ||||||||| ||  | |||||  ||||||| | |||||||| |   |||  ||||||||  || |||||||||||||||||||    
T  11366388 aagaagttaaaatgaaatttatttaaaac--acagaattttagcaagcataaggaatgctaacctaaaagacttaaagagcaacatacaaaggaaaagtg 11366485  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    |  |||||||||||||||||||||||||||||| ||||  ||||| |||||||| |||   |||| |||||||||||||||    
T  11366486 tc-cgtatatatgcggaacacccaaacaaacactcatgtatcaaacataaacttttacgagcaaatcaaaaacaccctcca 11366565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 32748160 - 32748026
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    |||||| ||||||||| |||||| || | |||||||||| || | || |||||||||| | ||||| || |||||| ||| |||||||||||||| ||||    
T  32748160 aagaagttaaaatgaaatttattcaaaatgtaaagaatcatatctagcacaaggaatgctaggctaagatacttaaatagcaacatacaaaggaatagtg 32748061  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacaccc 320  Q
    || ||| ||||  |||||||| |||||||||||||    
T  32748060 tgccgtgtatacacggaacactcaaacaaacaccc 32748026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 443 - 528
Target Start/End: Original strand, 10772633 - 10772718
Alignment:
Q  443 tgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaac 528  Q
    |||||||| ||| |||||||||||||| ||||| ||||||||||| ||| |||||||| ||||| |||||||||||| ||||||||    
T  10772633 tgagcaatggcagaaacaagtcttgtgccaaaccgttgcaaaacccatccaaaataaccatcaaacctaccaaaaacccgtgtaac 10772718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 24350769 - 24350678
Alignment:
Q  273 caaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctc 364  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| | | ||   ||||||||||| ||||||| ||||||| |||||||||||    
T  24350769 caaaggaaaagtgtgccgtgtatatgcggaacacccaaacaaataactatacatcaaatataaatttctacaaacaaaccgaaaacaccctc 24350678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 10670538 - 10670483
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccat 322  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  10670538 aacatacaaaggaaaagtttgtcgtatatatgcagaacatccaaacaaacacccat 10670483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 30845164 - 30845283
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctctt 545  Q
    ||||||||| |||||| ||||||||||||| |||||||||||  || |||||||| ||||| |||||||||||  |  ||||||| || ||| |||||||    
T  30845164 gcaatagcagaaacaaatcttgtgtcaaaccgttgcaaaacccctccaaaataaccatcaaacctaccaaaaatccaggtaaccgcaccttgcttctctt 30845263  T
Q  546 ttgcagttcagcgaagttaa 565  Q
     | ||||| |||| ||||||    
T  30845264 ctacagttgagcgcagttaa 30845283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 366
Target Start/End: Original strand, 9566550 - 9566642
Alignment:
Q  273 caaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    ||||||||||||||  ||||||||||||||| || ||||||||||| |||   |||||||||||||| ||||   |||||||||||||||||||    
T  9566550 caaaggaaaagtgtc-cgtatatatgcggaatactcaaacaaacactcatctatcaaatataaacttttacaagtaaaccaaaaacaccctcca 9566642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 10670386 - 10670320
Alignment:
Q  440 gcctgagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaa 506  Q
    ||||| ||||||||| |||||| ||||||||||||| |||| ||||||| || ||||||||||||||    
T  10670386 gcctgcgcaatagcagaaacaaatcttgtgtcaaaccgttgaaaaacctctccaaaataactatcaa 10670320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 31026892 - 31026767
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacat--acaaaggaaaag 283  Q
    |||||| ||||||||| ||||||||| ||   ||||||| ||||||| | ||| |||| | |||||  ||||||||  || |||||  ||||||||||||    
T  31026892 aagaagttaaaatgaaatttatttaaaacactaagaatcctagcaagcataagaaatgttaggctagaagacttaaaaagcaacatttacaaaggaaaag 31026793  T
Q  284 tgtgtcgtatatatgcggaacaccca 309  Q
    |||| ||||||||||| |||||||||    
T  31026792 tgtgccgtatatatgcagaacaccca 31026767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 24842732 - 24842774
Alignment:
Q  267 aacatacaaaggaaaagtgtgtcgtatatatgcggaacaccca 309  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  24842732 aacatacaaaggagaagtgtgtcgtatatatacggaacaccca 24842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 558
Target Start/End: Original strand, 24842927 - 24843040
Alignment:
Q  444 gagcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaaccgtactttgtttctc 543  Q
    ||||| ||||| |||||| |||||||  |||||||||  |||||  || |||| ||| ||||| |||||||||||| |||||||||| || ||| |||||    
T  24842927 gagcagtagcaaaaacaaatcttgtgctaaactgttgttaaaccc-tccaaaagaaccatcaaacctaccaaaaacccgtgtaaccgcaccttgcttctc 24843025  T
Q  544 ttttgcagttcagcg 558  Q
    || ||||||| ||||    
T  24843026 ttctgcagttgagcg 24843040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 527
Target Start/End: Complemental strand, 24350569 - 24350488
Alignment:
Q  446 gcaatagcataaacaagtcttgtgtcaaactgttgcaaaacctatcaaaaataactatcaatcctaccaaaaactcgtgtaa 527  Q
    ||||||||| |||||| | |||||  |||| |||||||||||  || |||||||| ||||| | ||||||||||||||||||    
T  24350569 gcaatagcagaaacaaattttgtgctaaaccgttgcaaaacccctccaaaataaccatcaaacttaccaaaaactcgtgtaa 24350488  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 31026762 - 31026713
Alignment:
Q  327 caaatataaacttctacatacaaaccaaaaacaccctccactgaaggccc 376  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||| |||||    
T  31026762 caaatacaaactcctacaaacaaaccaaaaacaccctccactgagggccc 31026713  T

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Target: scaffold0083 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 2665 - 2823
Alignment:
Q  186 aagaagctaaaatgaagtttatttaatacgtaaagaatcgtagcaagtacaaggaatgattggctatgagacttaagtaggaacatacaaaggaaaagtg 285  Q
    ||||| ||||||||||  ||||| || ||| |||||||| ||||||| |||||||||| | | ||| |||||||||  || |||||||||||||||||||    
T  2665 aagaaactaaaatgaaacttattcaaaacgcaaagaatcctagcaagcacaaggaatgctagactaggagacttaacaagcaacatacaaaggaaaagtg 2764  T
Q  286 tgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctaca 344  Q
    || ||||||||||||||||| ||||||||| |||| ||  ||||||| |||||||||||    
T  2765 tgccgtatatatgcggaacatccaaacaaagacccttgtatcaaatacaaacttctaca 2823  T

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Target: scaffold0005 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 366
Target Start/End: Original strand, 269672 - 269762
Alignment:
Q  275 aaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaaccaaaaacaccctcca 366  Q
    ||||||||||||  |||| |||||||||||||| |||||||||||||||  |||||||||||||| |||   ||||||||||| ||||||||    
T  269672 aaggaaaagtgtc-cgtacatatgcggaacacctaaacaaacacccatgtatcaaatataaacttttacgagcaaaccaaaaataccctcca 269762  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 375
Target Start/End: Original strand, 2486 - 2606
Alignment:
Q  253 gagacttaagtaggaacatacaaaggaaaagtgtgtcgtatatatgcggaacacccaaacaaacacccatgattcaaatataaacttctacatacaaacc 352  Q
    ||||||||| ||| ||||||||||||||||||| |   ||||||||||| |||| ||||||||||    |   ||||||| |||  |||||| |||||||    
T  2486 gagacttaaatagcaacatacaaaggaaaagtgcg--ctatatatgcgggacactcaaacaaacatttgtacatcaaatacaaatgtctacaaacaaacc 2583  T
Q  353 aaaaacaccctccactgaaggcc 375  Q
    |||||||||||||| ||| ||||    
T  2584 aaaaacaccctccattgagggcc 2606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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