View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5082_high_8 (Length: 462)

Name: NF5082_high_8
Description: NF5082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5082_high_8
NF5082_high_8
[»] chr1 (23 HSPs)
chr1 (246-459)||(14792498-14792709)
chr1 (246-433)||(18121509-18121694)
chr1 (246-446)||(44892355-44892553)
chr1 (254-445)||(38887037-38887225)
chr1 (246-407)||(41225441-41225600)
chr1 (246-407)||(41226694-41226853)
chr1 (312-405)||(21243746-21243838)
chr1 (288-459)||(24719446-24719615)
chr1 (379-446)||(16058255-16058329)
chr1 (294-397)||(39061275-39061375)
chr1 (382-459)||(51324544-51324621)
chr1 (287-398)||(21188030-21188138)
chr1 (246-288)||(21243841-21243883)
chr1 (379-433)||(24723312-24723366)
chr1 (282-398)||(11808187-11808288)
chr1 (246-312)||(8306510-8306577)
chr1 (246-289)||(17901905-17901948)
chr1 (381-459)||(21168972-21169051)
chr1 (302-345)||(40390112-40390155)
chr1 (245-289)||(6834074-6834118)
chr1 (246-289)||(21239146-21239189)
chr1 (93-169)||(16025342-16025420)
chr1 (288-351)||(12710814-12710877)
[»] scaffold0401 (1 HSPs)
scaffold0401 (246-445)||(8727-8924)
[»] chr6 (20 HSPs)
chr6 (246-459)||(22557154-22557364)
chr6 (246-458)||(7217180-7217389)
chr6 (246-446)||(23431388-23431593)
chr6 (246-446)||(18455021-18455219)
chr6 (246-407)||(25921907-25922066)
chr6 (246-446)||(32259751-32259948)
chr6 (246-395)||(31734613-31734760)
chr6 (246-351)||(23657994-23658099)
chr6 (296-398)||(1818909-1819008)
chr6 (379-459)||(21683010-21683090)
chr6 (317-398)||(25601326-25601406)
chr6 (362-459)||(28948597-28948692)
chr6 (330-404)||(31166230-31166302)
chr6 (287-398)||(18459253-18459362)
chr6 (246-289)||(29045170-29045213)
chr6 (379-460)||(18982609-18982691)
chr6 (381-446)||(19167800-19167866)
chr6 (359-403)||(13285767-13285809)
chr6 (296-365)||(18982371-18982439)
chr6 (287-351)||(24506157-24506220)
[»] chr4 (25 HSPs)
chr4 (246-446)||(19565866-19566064)
chr4 (246-459)||(46741105-46741316)
chr4 (246-433)||(12623222-12623407)
chr4 (246-446)||(33243235-33243440)
chr4 (246-405)||(40230212-40230369)
chr4 (246-398)||(44023599-44023749)
chr4 (246-351)||(33186808-33186913)
chr4 (246-340)||(12424345-12424439)
chr4 (331-459)||(26921444-26921570)
chr4 (296-459)||(2424322-2424483)
chr4 (246-398)||(18462929-18463079)
chr4 (93-189)||(355687-355784)
chr4 (296-460)||(26446163-26446325)
chr4 (296-398)||(14477588-14477687)
chr4 (296-398)||(13165089-13165188)
chr4 (331-379)||(45314096-45314144)
chr4 (246-312)||(16296777-16296844)
chr4 (296-446)||(14631091-14631238)
chr4 (351-418)||(26014295-26014360)
chr4 (318-407)||(9638987-9639075)
chr4 (379-446)||(16296975-16297041)
chr4 (302-345)||(20150787-20150830)
chr4 (20-65)||(355557-355602)
chr4 (414-446)||(15115293-15115325)
chr4 (414-446)||(37019741-37019773)
[»] scaffold0039 (1 HSPs)
scaffold0039 (246-459)||(9863-10074)
[»] chr5 (15 HSPs)
chr5 (246-459)||(14025742-14025953)
chr5 (246-445)||(8833155-8833352)
chr5 (246-459)||(26749938-26750148)
chr5 (246-407)||(8503875-8504034)
chr5 (246-395)||(26762308-26762455)
chr5 (293-459)||(1626855-1627017)
chr5 (384-446)||(660830-660892)
chr5 (404-459)||(20197593-20197648)
chr5 (296-398)||(21504096-21504195)
chr5 (379-442)||(21299989-21300059)
chr5 (56-147)||(23374572-23374666)
chr5 (302-345)||(24068191-24068234)
chr5 (378-407)||(19921680-19921709)
chr5 (379-407)||(21398631-21398659)
chr5 (335-398)||(21404080-21404141)
[»] scaffold0439 (1 HSPs)
scaffold0439 (246-446)||(4327-4525)
[»] chr3 (28 HSPs)
chr3 (246-445)||(53646001-53646205)
chr3 (246-378)||(54330321-54330453)
chr3 (246-346)||(14152446-14152546)
chr3 (246-345)||(5215552-5215651)
chr3 (303-446)||(15566706-15566855)
chr3 (287-398)||(21845648-21845756)
chr3 (296-398)||(48631288-48631387)
chr3 (55-189)||(511652-511789)
chr3 (246-314)||(15566418-15566486)
chr3 (382-437)||(24548911-24548966)
chr3 (342-407)||(50350803-50350866)
chr3 (287-398)||(3160623-3160731)
chr3 (385-432)||(24547243-24547290)
chr3 (408-446)||(6820237-6820275)
chr3 (382-446)||(6159445-6159516)
chr3 (362-446)||(11563747-11563828)
chr3 (20-65)||(511825-511870)
chr3 (379-446)||(17518814-17518888)
chr3 (379-446)||(17533676-17533750)
chr3 (379-446)||(6156747-6156813)
chr3 (379-446)||(35960877-35960943)
chr3 (379-446)||(40808033-40808099)
chr3 (379-446)||(44274455-44274521)
chr3 (246-289)||(45803440-45803483)
chr3 (107-147)||(10289882-10289923)
chr3 (379-407)||(14641535-14641563)
chr3 (414-446)||(33565158-33565190)
chr3 (379-407)||(49900767-49900795)
[»] chr8 (25 HSPs)
chr8 (246-459)||(17978351-17978562)
chr8 (246-459)||(22474662-22474873)
chr8 (246-407)||(12037151-12037310)
chr8 (246-407)||(21579193-21579352)
chr8 (246-407)||(29762855-29763014)
chr8 (246-395)||(41680132-41680279)
chr8 (246-407)||(22208174-22208334)
chr8 (267-445)||(36405085-36405257)
chr8 (246-407)||(22258293-22258453)
chr8 (296-446)||(4380565-4380713)
chr8 (382-459)||(36732347-36732424)
chr8 (379-459)||(5761570-5761650)
chr8 (379-446)||(21514728-21514795)
chr8 (379-459)||(22317846-22317926)
chr8 (302-398)||(20879435-20879528)
chr8 (379-460)||(22532066-22532147)
chr8 (379-460)||(22536751-22536832)
chr8 (379-459)||(42265444-42265524)
chr8 (379-418)||(20022016-20022055)
chr8 (348-398)||(20517032-20517080)
chr8 (302-345)||(22966772-22966815)
chr8 (379-446)||(20397457-20397525)
chr8 (302-340)||(21697512-21697550)
chr8 (414-446)||(38989707-38989739)
chr8 (414-446)||(39020804-39020836)
[»] scaffold0385 (1 HSPs)
scaffold0385 (246-446)||(251-449)
[»] scaffold0011 (1 HSPs)
scaffold0011 (246-459)||(33360-33571)
[»] scaffold0630 (1 HSPs)
scaffold0630 (246-446)||(8969-9166)
[»] chr7 (22 HSPs)
chr7 (246-446)||(14317978-14318175)
chr7 (246-407)||(14160843-14161002)
chr7 (246-378)||(9743093-9743225)
chr7 (246-395)||(15119306-15119453)
chr7 (246-407)||(43276731-43276890)
chr7 (296-459)||(4690598-4690759)
chr7 (296-446)||(43745612-43745760)
chr7 (249-340)||(8513806-8513898)
chr7 (382-444)||(48212677-48212739)
chr7 (318-398)||(42565829-42565907)
chr7 (355-445)||(8135187-8135275)
chr7 (284-398)||(33060383-33060494)
chr7 (293-340)||(8488147-8488194)
chr7 (379-446)||(20214184-20214250)
chr7 (379-445)||(24269895-24269962)
chr7 (379-446)||(47095489-47095555)
chr7 (379-425)||(15095606-15095652)
chr7 (381-446)||(13132285-13132349)
chr7 (379-407)||(58400-58428)
chr7 (379-407)||(12127150-12127178)
chr7 (414-446)||(14180347-14180379)
chr7 (379-407)||(19195648-19195676)
[»] scaffold0048 (1 HSPs)
scaffold0048 (246-459)||(56882-57090)
[»] scaffold0020 (1 HSPs)
scaffold0020 (246-395)||(174127-174274)
[»] chr2 (24 HSPs)
chr2 (246-446)||(23968571-23968769)
chr2 (246-407)||(14179715-14179874)
chr2 (246-407)||(14183453-14183612)
chr2 (246-390)||(24717925-24718067)
chr2 (313-398)||(19647206-19647289)
chr2 (362-446)||(19201148-19201230)
chr2 (284-398)||(20005967-20006078)
chr2 (379-446)||(22502008-22502082)
chr2 (379-446)||(22509942-22510016)
chr2 (296-398)||(28652548-28652648)
chr2 (379-446)||(23610663-23610730)
chr2 (381-442)||(149446-149514)
chr2 (331-446)||(12626367-12626488)
chr2 (318-398)||(45535903-45535981)
chr2 (368-433)||(18388151-18388214)
chr2 (55-147)||(43938684-43938779)
chr2 (246-312)||(149585-149652)
chr2 (296-375)||(25584280-25584358)
chr2 (246-297)||(12626527-12626578)
chr2 (379-446)||(24516223-24516289)
chr2 (386-459)||(22260082-22260155)
chr2 (379-407)||(17307523-17307551)
chr2 (379-407)||(21369330-21369358)
chr2 (20-52)||(27609151-27609183)
[»] scaffold0063 (1 HSPs)
scaffold0063 (246-398)||(62624-62774)
[»] scaffold0371 (2 HSPs)
scaffold0371 (246-395)||(10445-10592)
scaffold0371 (318-395)||(3853-3927)
[»] scaffold0108 (1 HSPs)
scaffold0108 (246-459)||(6322-6535)
[»] scaffold0431 (1 HSPs)
scaffold0431 (246-340)||(5536-5630)
[»] scaffold0261 (1 HSPs)
scaffold0261 (297-443)||(6371-6514)
[»] scaffold1437 (1 HSPs)
scaffold1437 (246-365)||(321-440)
[»] scaffold1160 (1 HSPs)
scaffold1160 (246-339)||(590-683)
[»] scaffold0121 (1 HSPs)
scaffold0121 (246-340)||(20105-20199)
[»] scaffold0092 (1 HSPs)
scaffold0092 (246-398)||(38438-38588)
[»] scaffold0021 (3 HSPs)
scaffold0021 (246-308)||(169346-169408)
scaffold0021 (313-400)||(17078-17163)
scaffold0021 (313-400)||(26609-26694)
[»] scaffold0056 (1 HSPs)
scaffold0056 (382-459)||(18315-18392)
[»] scaffold0217 (1 HSPs)
scaffold0217 (313-398)||(28686-28769)
[»] scaffold0165 (2 HSPs)
scaffold0165 (287-400)||(31877-31987)
scaffold0165 (330-394)||(32038-32100)
[»] scaffold0203 (1 HSPs)
scaffold0203 (296-450)||(17877-18036)
[»] scaffold0059 (1 HSPs)
scaffold0059 (296-459)||(49686-49847)
[»] scaffold0337 (1 HSPs)
scaffold0337 (287-398)||(3152-3260)
[»] scaffold0017 (2 HSPs)
scaffold0017 (287-398)||(23561-23669)
scaffold0017 (379-459)||(26764-26844)
[»] scaffold0004 (1 HSPs)
scaffold0004 (379-459)||(328223-328303)
[»] scaffold0103 (1 HSPs)
scaffold0103 (93-189)||(30436-30532)
[»] scaffold1256 (1 HSPs)
scaffold1256 (318-432)||(2162-2275)
[»] scaffold0516 (2 HSPs)
scaffold0516 (318-432)||(5267-5380)
scaffold0516 (379-432)||(5170-5223)
[»] scaffold0007 (2 HSPs)
scaffold0007 (379-459)||(158757-158837)
scaffold0007 (379-459)||(18635-18716)
[»] scaffold1939 (1 HSPs)
scaffold1939 (251-396)||(38-181)
[»] scaffold0394 (1 HSPs)
scaffold0394 (287-398)||(7510-7618)
[»] scaffold0111 (1 HSPs)
scaffold0111 (379-446)||(12474-12548)
[»] scaffold0058 (1 HSPs)
scaffold0058 (287-398)||(59652-59760)
[»] scaffold1102 (1 HSPs)
scaffold1102 (314-398)||(1947-2029)
[»] scaffold0125 (1 HSPs)
scaffold0125 (318-405)||(28528-28614)
[»] scaffold1800 (1 HSPs)
scaffold1800 (284-398)||(552-663)
[»] scaffold0070 (1 HSPs)
scaffold0070 (382-443)||(11193-11261)
[»] scaffold0032 (1 HSPs)
scaffold0032 (318-445)||(61790-61922)
[»] scaffold0676 (1 HSPs)
scaffold0676 (379-446)||(2918-2992)
[»] scaffold0213 (1 HSPs)
scaffold0213 (290-407)||(19157-19272)
[»] scaffold0145 (1 HSPs)
scaffold0145 (302-345)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (302-345)||(29273-29316)
[»] scaffold0016 (1 HSPs)
scaffold0016 (56-147)||(17799-17893)
[»] scaffold0300 (1 HSPs)
scaffold0300 (93-169)||(14015-14092)
[»] scaffold0175 (1 HSPs)
scaffold0175 (379-459)||(8679-8758)
[»] scaffold0113 (1 HSPs)
scaffold0113 (362-446)||(35512-35593)
[»] scaffold0100 (1 HSPs)
scaffold0100 (379-459)||(26568-26649)
[»] scaffold1186 (1 HSPs)
scaffold1186 (296-446)||(1976-2123)
[»] scaffold0328 (1 HSPs)
scaffold0328 (379-442)||(18586-18655)
[»] scaffold0005 (1 HSPs)
scaffold0005 (296-446)||(186145-186292)
[»] scaffold1941 (1 HSPs)
scaffold1941 (379-446)||(175-241)
[»] scaffold0802 (1 HSPs)
scaffold0802 (379-446)||(4658-4724)
[»] scaffold0628 (1 HSPs)
scaffold0628 (379-418)||(1034-1073)
[»] scaffold0594 (1 HSPs)
scaffold0594 (246-289)||(2146-2189)
[»] scaffold0485 (1 HSPs)
scaffold0485 (44-83)||(4457-4496)
[»] scaffold0308 (1 HSPs)
scaffold0308 (385-459)||(13483-13557)
[»] scaffold0555 (1 HSPs)
scaffold0555 (382-418)||(8722-8758)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 7e-87; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 246 - 459
Target Start/End: Complemental strand, 14792709 - 14792498
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  14792709 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcgaaacctattaacaactacaaggttaaaccctttttca 14792610  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14792609 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 14792512  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  14792511 ctcttggtttctcc 14792498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 246 - 433
Target Start/End: Original strand, 18121509 - 18121694
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  18121509 tcatcggattatctactctttttacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaaggttaaatcctttttca 18121608  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 433  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  18121609 ggattacatacttatgattaaagaaggtta--atcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 44892355 - 44892553
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  44892355 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaatatcaaaacctattaacaactacaaggttaaatcctttttca 44892454  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
     ||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44892455 agattacatacttatgattaaagaaggttag--tcccacccttaacttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctctt 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 254 - 445
Target Start/End: Complemental strand, 38887225 - 38887037
Alignment:
Q  254 ttatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattaca 353  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38887225 ttatctactctttctacgatcacttttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattaca 38887126  T
Q  354 tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||| |  |||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  38887125 tacttatgattaaagaaggttagttt--cacccttaccttaggttagatgatcacaagtttctaccgctttctcttctc-gactcttctctt 38887037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 41225600 - 41225441
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||    
T  41225600 tcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgcaaggttaaaccctttttca 41225501  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  41225500 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 41225441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 41226853 - 41226694
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||    
T  41226853 tcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgcaaggttaaaccctttttca 41226754  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  41226753 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 41226694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 312 - 405
Target Start/End: Complemental strand, 21243838 - 21243746
Alignment:
Q  312 cctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccctta-ccttagattagatgat 405  Q
    |||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  21243838 cctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtct--cacccttacccttagattagatgat 21243746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 459
Target Start/End: Complemental strand, 24719615 - 24719446
Alignment:
Q  288 aaccttaatt-ctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacc 385  Q
    |||||||||| ||| ||||||||||| || ||||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||   ||||    
T  24719615 aaccttaatttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc---cacc 24719520  T
Q  386 cttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  24719519 cttaccataggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttctcttggtttctcc 24719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 16058329 - 16058255
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||    
T  16058329 tcccacccttaccttagattagatgatcggactctacaagattctaccactttctcttctctgactcttctcttc 16058255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 397
Target Start/End: Original strand, 39061275 - 39061375
Alignment:
Q  294 aattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctt 393  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||| || ||||| |||| ||||| ||||||| ||||||||||  |||||| ||||||||    
T  39061275 aattctataacatcaaaac-tatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttag--tcccactcttacctt 39061371  T
Q  394 agat 397  Q
    ||||    
T  39061372 agat 39061375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 459
Target Start/End: Original strand, 51324544 - 51324621
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||||||   |||||||||| ||||||||||||||||||||||  |||||||||| ||| | ||||||    
T  51324544 cacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctggttcttctcttctcttggtttctcc 51324621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21188138 - 21188030
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| |||||| ||||  |||  |||| ||||| ||||||||| ||||||||  ||||||||    
T  21188138 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaatcctttctcaaaattatatactcatgattaaaaaaggttag--tcccaccc 21188042  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  21188041 ttaccttagatt 21188030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21243883 - 21243841
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaa 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21243883 tcatcggattatctactctttctacaatcaattttagtttcaa 21243841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 433
Target Start/End: Complemental strand, 24723366 - 24723312
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 433  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  24723366 tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 398
Target Start/End: Complemental strand, 11808288 - 11808187
Alignment:
Q  282 gtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcc 381  Q
    |||||||| | |||||||  |||||||||||||||||||||||||||| |||||             |||||||||||||||||||||||||||||||      
T  11808288 gtttcaaatcctaattctgaaacatcaaaacctattaacaactacaaggttaaa-------------ttacatacttatgattaaagaaggttagtct-- 11808204  T
Q  382 cacccttaccttagatt 398  Q
    |||||||||||| ||||    
T  11808203 cacccttaccttggatt 11808187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 8306510 - 8306577
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 312  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  8306510 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 8306577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 17901948 - 17901905
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  17901948 tcatcggattatctactctttcaacaatcaattttagtttcaaa 17901905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 459
Target Start/End: Original strand, 21168972 - 21169051
Alignment:
Q  381 ccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||||||| | ||||  |||| ||||||  ||||||||||||||||||||||||||| ||| | ||||||    
T  21168972 ccacccttaccttagattggttgattacaaggttctacgagctttctcttctctgactcttctcttctcttggtttctcc 21169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 6834074 - 6834118
Alignment:
Q  245 atcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  6834074 atcatcggattacctactctttcaacaatcaattttagtttcaaa 6834118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 21239189 - 21239146
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  21239189 tcatcggattacctactctttcaacaatcaattttagtttcaaa 21239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 16025342 - 16025420
Alignment:
Q  93 acttcatttagcacaattagcattt-gaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatca 169  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||| ||||  |||||||| ||||| || |||||||||    
T  16025342 acttcatttaatacaattagcattttgagatgattaatcatttacacctaactaatccacatttcaagtttacatatca 16025420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 12710814 - 12710877
Alignment:
Q  288 aaccttaatt-ctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggatta 351  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||| ||||| ||||    
T  12710814 aaccttaatttctataacatcaaaac-taacaacaactacaagattaaaccctttttcagaatta 12710877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 246 - 445
Target Start/End: Original strand, 8727 - 8924
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  8727 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaaccgattaacatctacaaggttaaaccctttttca 8826  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8827 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 8924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 22557154 - 22557364
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22557154 tcatcggattatctactctttctacgatcaattttagtttcaaacccgaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22557253  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22557254 ggattacatacttatga-taaagaaggtta--ctcccacccttaccttaggttagatgatcgcaaggttctactgctttctcttctctgactcttctctt 22557350  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  22557351 ctcttggtttctcc 22557364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 246 - 458
Target Start/End: Complemental strand, 7217389 - 7217180
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  7217389 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaa-cctattaacaactacaaggttaaaccctttttca 7217291  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7217290 ggattacatacttatgattaaagaaggttagtct--cacccttaccttaggctagatgatcgcaaggttctaccgctttctcttttctgactcttctctt 7217193  T
Q  446 ccctttgcttctc 458  Q
      |||| ||||||    
T  7217192 atctttacttctc 7217180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 446
Target Start/End: Complemental strand, 23431593 - 23431388
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23431593 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattagcaactacaaggttaaaccctttttca 23431494  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactc 438  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  23431493 ggattacatacttatgattaaagaaggttag--tcccacgcttaccttagattagatgatcggactctacaagattctaccgctttctcttctctgactc 23431396  T
Q  439 ttctcttc 446  Q
    ||||||||    
T  23431395 ttctcttc 23431388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 246 - 446
Target Start/End: Complemental strand, 18455219 - 18455021
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  18455219 tcatcggattatctactctttctactatcaattctagtttcaaaccctaattctacaatatcaaaacctattaacaactacaaggttaaaacctttttca 18455120  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  18455119 ggattacatacttatgattaaagaaggtta--ctcccacccttaccttaggttagatgatcacaaggttctaccgctttctcttctctaactcttctctt 18455022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 25921907 - 25922066
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |    
T  25921907 tcatcagattatttactctttctacaatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttta 25922006  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  25922007 ggattacatacttatgattaaataaggttag--tcccacccttaccttagattagatgatcg 25922066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 32259751 - 32259948
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||| ||| ||||    
T  32259751 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaaaaactacaaggttaaactctttttca 32259850  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  || ||||||||||| ||||| |||   || | || ||||||||||||||| |||| |||||||||||    
T  32259851 ggattacatacttatgattaaagaaggttag--tcacacccttacctaagatt-gatcgacgaaggactctaccgctttctctcctctaactcttctctt 32259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 31734613 - 31734760
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||| ||||    
T  31734613 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattttacaacatcaaaacctattaacaactgcaaggttaaaccctttttca 31734712  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    | |||||||||||||||||||||||||||||  |||||||||||||||||    
T  31734713 gaattacatacttatgattaaagaaggttag--tcccacccttaccttag 31734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 23657994 - 23658099
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  23657994 tcatcggattatctactctttctacaatcaattttagtttcaaacccttattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 23658093  T
Q  346 ggatta 351  Q
    | ||||    
T  23658094 gaatta 23658099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 1818909 - 1819008
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||||| |||||||||||||||||||||  ||||||||||||||    
T  1818909 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtct--cacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 21683090 - 21683010
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||| ||| | ||||||    
T  21683090 tcccacccttaccttaggttagatgatcgcaaggtcctacagctttctcttctctgactcttctcttctcttggtttctcc 21683010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 25601406 - 25601326
Alignment:
Q  317 taacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||||||||| | |||||||||| ||||| ||||||| ||||||||||| ||||||||||||  | |||||||||||||||    
T  25601406 taacaactacaaaggttaaaccctttttcagaattacattcttatgattaatgaaggttagtct--ctcccttaccttagatt 25601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 459
Target Start/End: Original strand, 28948597 - 28948692
Alignment:
Q  362 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||| |||| |||||||||  ||||||||||||||||   |||||||||| ||||| |||||||| ||||||| ||||||||||| ||| | ||||||    
T  28948597 attagagaaagttagtctc--acccttaccttagattgattgatcgcaaggttctatcgctttcttttctctggctcttctcttctcttggtttctcc 28948692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 31166230 - 31166302
Alignment:
Q  330 attaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatga 404  Q
    ||||||||||| ||||| |||| | ||| ||||||||||| |||||||||  ||||||||||||||||| |||||    
T  31166230 attaaaccctttttcagaattatagactcatgattaaagatggttagtct--cacccttaccttagattggatga 31166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 18459253 - 18459362
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttctt-caggattacatacttatgattaaagaaggttagtctcccacc 385  Q
    |||||| | ||||| ||||||||||| | |||| ||||| || ||||||||||| || ||| || | ||||| |||||||||| |||||||||  |||||    
T  18459253 aaacctaacttctataacatcaaaac-tgttaaaaactataaaattaaacccttttttcagaatcatatactcatgattaaagtaggttagtc--ccacc 18459349  T
Q  386 cttaccttagatt 398  Q
    |||||||||||||    
T  18459350 cttaccttagatt 18459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 29045170 - 29045213
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  29045170 tcatcggattacctactctttcaacaatcaattttagtttcaaa 29045213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 460
Target Start/End: Original strand, 18982609 - 18982691
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttccctttgcttctcca 460  Q
    ||||||| ||||||||||||   ||||  |||| ||||||  ||||||||||||||||||||||||||| ||| | |||||||    
T  18982609 tcccaccgttaccttagattgattgattacaaggttctacaagctttctcttctctgactcttctcttctcttggtttctcca 18982691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 19167866 - 19167800
Alignment:
Q  381 ccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||| | ||||  |||| ||||||  |||||||||||||||||| ||||||||    
T  19167866 ccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgacttttctcttc 19167800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 403
Target Start/End: Original strand, 13285767 - 13285809
Alignment:
Q  359 atgattaaagaaggttagtctcccacccttaccttagattagatg 403  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  13285767 atgattatagaaggttagtc--ccacccttaccttagattagatg 13285809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 18982371 - 18982439
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgatta 365  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||||| ||||| |  | |||||||||||||    
T  18982371 ttctacagcatcaaaac-tatcaacaactacaaaattaaaccctttttcagaaccatatacttatgatta 18982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 24506220 - 24506157
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggatta 351  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||| ||||    
T  24506220 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaaccctttttcagaatta 24506157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 246 - 446
Target Start/End: Complemental strand, 19566064 - 19565866
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  19566064 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 19565965  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||   |||||||||| ||||||||||||||||||||| |||||||||||    
T  19565964 ggattacatacttatgattaaagaaggttag--taccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctcttactcttctctt 19565867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 46741105 - 46741316
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  46741105 tcatcggattatccactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaaccaattaacaactacaaggttaaaccctttttca 46741204  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  46741205 ggattacatatttatgattaaagaaggttag--tcccacacttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctgtt 46741302  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  46741303 ctcttggtttctcc 46741316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 246 - 433
Target Start/End: Original strand, 12623222 - 12623407
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12623222 tcatcgcattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 12623321  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 433  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  12623322 ggattacatacctatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 246 - 446
Target Start/End: Complemental strand, 33243440 - 33243235
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  33243440 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctatttca 33243341  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactc 438  Q
     |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |       |||||||||| |||||||||||||| |||||    
T  33243340 agattacatacttatgattaaagaatgttagtct--cacccttaccttagattagatgatgggactctacaagattctaacgctttctcttctccgactc 33243243  T
Q  439 ttctcttc 446  Q
    ||||||||    
T  33243242 ttctcttc 33243235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 40230212 - 40230369
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  40230212 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccctttttca 40230311  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgat 405  Q
     |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  40230312 agattacatacttatgattaaagaaagttag--tcccacccttaccttagattagatgat 40230369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 44023749 - 44023599
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| ||||    
T  44023749 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaagtacaaggttaaaccctttttca 44023650  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
     ||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  44023649 agattacatacttatgattaaagaaggttag--tcgcacccttaccttagatt 44023599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 33186808 - 33186913
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  33186808 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccacaaggttaaaccctttttca 33186907  T
Q  346 ggatta 351  Q
    | ||||    
T  33186908 gaatta 33186913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 246 - 340
Target Start/End: Complemental strand, 12424439 - 12424345
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12424439 tcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactacaaagttaaaccctt 12424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 331 - 459
Target Start/End: Complemental strand, 26921570 - 26921444
Alignment:
Q  331 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttc 430  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||  | ||||||||||||| |||||||||| |||| || |||||||||||||||    
T  26921570 ttaaaccctttttcagaattacatacttatgattaatgaaggttagtc--ctacccttaccttaggttagatgatcacaaggttataccgctttctcttc 26921473  T
Q  431 tctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||||| ||| | ||||||    
T  26921472 tctgactcttctcttctcttggtttctcc 26921444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 459
Target Start/End: Complemental strand, 2424483 - 2424322
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| ||||  |||| | | ||||  |||| |||| |||||||||  ||||||||||||    
T  2424483 ttctataacatcaaaac-taataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctc--acccttacctta 2424387  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | ||||||    
T  2424386 ggttagatgatcgcaaggttctaacgctttctcttctctgactcttctcttctcttggtttctcc 2424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 398
Target Start/End: Original strand, 18462929 - 18463079
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattt-tagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttc 344  Q
    |||| |||||| |||| ||||| || ||||| || || ||| |||||| | || || ||||||||||| ||||||||||||||| ||||||||||| |||    
T  18462929 tcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttttataacatcaaaac-tattaacaactacaaaattaaaccctttttc 18463027  T
Q  345 aggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    || |||| ||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  18463028 agaattatatactcatgattaaagaaggttag--tcccacctttaccttagatt 18463079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 355687 - 355784
Alignment:
Q  93 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatcatagccaaatcaatcatcatt 189  Q
    ||||||||||||| || |||| ||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  355687 acttcatttagcaaaactagcctttgaaacgattaatcatttacgcctagctaatccacatttcaagtatacatatcatagcaaaattaatcatcatt 355784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 460
Target Start/End: Original strand, 26446163 - 26446325
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||||||||||| || ||||| |||| | | |  || |||| |||| | |||||  | |||||||| |||    
T  26446163 ttctataacatcaaaac-taacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtc--ctacccttacttta 26446259  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcca 460  Q
    | ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  26446260 ggttagatgatcgcaaggttctaccgctctctcttctctgactcttctcttctcttggtttctcca 26446325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 14477588 - 14477687
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| ||| ||| |||||||||| |||||||| ||||| |||| ||||| ||||||||||||||||||  | |||||||||||||||    
T  14477588 ttctataacatcaaaac-tatcaacgactacaagatcaaaccctttttcagaattatatactcatgattaaagaaggttag--tgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 13165089 - 13165188
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| |||||||||||| || ||||| ||||| ||||  ||   ||||| ||||||||||||||||||  |||||||||||||||||    
T  13165089 ttctataacatcaaaac-tattaacaactataaaattaacccctttttcacaatcctatactcatgattaaagaaggttag--tcccacccttaccttag 13165185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 45314144 - 45314096
Alignment:
Q  331 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtct 379  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  45314144 ttaaaccctttttcagaattacatacttatgattaatgaaggttagtct 45314096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 16296777 - 16296844
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 312  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  16296777 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 16296844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 446
Target Start/End: Original strand, 14631091 - 14631238
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  14631091 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 14631187  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  14631188 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 14631238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 418
Target Start/End: Original strand, 26014295 - 26014360
Alignment:
Q  351 acatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctac 418  Q
    ||||||| | |||||  |||||||||||  ||||||||||||||||||||||||||| ||| ||||||    
T  26014295 acatactcaagattattgaaggttagtc--ccacccttaccttagattagatgatcggaaggttctac 26014360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 407
Target Start/End: Original strand, 9638987 - 9639075
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||| |||||||||| ||||| ||||||  ||| || |||| |||| | |||  |||||||||||||||||||||||| ||||    
T  9638987 aacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctag--tcccacccttaccttagattagattatcg 9639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 16296975 - 16297041
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  16296975 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 16297041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 20150787 - 20150830
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||    
T  20150787 aacatcaaaacctattaacaactacaaggttaaatcctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 355557 - 355602
Alignment:
Q  20 catcgtcactttatatatgtatactcatcatcaaaaatcatcatca 65  Q
    |||| ||||||||||||||||||||| |||| |||||||| |||||    
T  355557 catcatcactttatatatgtatactcgtcataaaaaatcaccatca 355602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Original strand, 15115293 - 15115325
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  15115293 tctaccgctttctctcctctgactcttctcttc 15115325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Original strand, 37019741 - 37019773
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  37019741 tctaccgctttctctcctctgactcttctcttc 37019773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 246 - 459
Target Start/End: Complemental strand, 10074 - 9863
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||  ||||||||| ||||    
T  10074 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattagaaactacaaggctaaaccctttttca 9975  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    | |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  9974 gaattacatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctctt 9877  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  9876 ctcttggtttctcc 9863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 246 - 459
Target Start/End: Complemental strand, 14025953 - 14025742
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  14025953 tcatcggattatctactctttctacgatcaattgtagtttcaaaccctaattatacaacatcaaaatctattaacaactacaaggttaaaccctttttca 14025854  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||    
T  14025853 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagattagatgatcgcaaggttctaccgctttcttttctttgattcttctctt 14025756  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  14025755 ctcttggtttctcc 14025742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 246 - 445
Target Start/End: Complemental strand, 8833352 - 8833155
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  8833352 tcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactataaggttaaaccctttttca 8833253  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8833252 ggattacatacttatgattaaagaaggtcag--tcccacccttaccctaggttagatgatcgcaaggttctacagctttctcttctctgactcttctctt 8833155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 26749938 - 26750148
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||| |||||||| | ||||    
T  26749938 tcatcggattatctactctttctatgatcaattttagttttaaccct-aattctacaacatcaaaacttattaacaactacaaggttaaaccccttttca 26750036  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||| ||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||    
T  26750037 ggattatatacttatgattaaaaaaggttagtct--cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctaactcttccctt 26750134  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  26750135 ctcttggtttctcc 26750148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 8504034 - 8503875
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  8504034 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaactcttgttca 8503935  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||| ||||    
T  8503934 ggattacatacttatgattgaagaaggttag--tcccacccttaccttatattagataatcg 8503875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 26762308 - 26762455
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  26762308 tcatcgaattatttactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 26762407  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  26762408 ggattacataattatgattaaagaaggttag--tcccacccttaccttag 26762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 293 - 459
Target Start/End: Complemental strand, 1627017 - 1626855
Alignment:
Q  293 taattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacct 392  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||    
T  1627017 taattttacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttag--tcacacccttacct 1626920  T
Q  393 tagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||| |||||| |||||||| ||||||||||||||||  |||||||||||||||| ||| | ||||||    
T  1626919 taggttagataatcgcaaggttctaccgctttctct--tctgactcttctcttctcttggtttctcc 1626855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 660830 - 660892
Alignment:
Q  384 cccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  660830 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctccgactcttctcttc 660892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 20197648 - 20197593
Alignment:
Q  404 atcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  20197648 atcgcaagattctaccgctttctcttctctgactcttctcttctcttggtttctcc 20197593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 21504096 - 21504195
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| || ||||||||||||  |||||||||| ||||| |  | ||||||||||||||||||||||||  ||||||| |||||||||    
T  21504096 ttctataacatcaaaac-tactaacaactacaaacttaaaccctttttcagaaccatatacttatgattaaagaaggttag--tcccacctttaccttag 21504192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 21300059 - 21299989
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 442  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  21300059 tcccacccttaccttagattagatgatcagactctacaagattctaccgctttctcttctctgactcttct 21299989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 23374666 - 23374572
Alignment:
Q  56 atcatcatcaaacatttaccacatcaaataagtagcaact--tcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 147  Q
    |||||||||||||||||||||||||||| ||  | ||  |  |||||||||| || |||||||| ||| |||||||||||||| |||||||||||    
T  23374666 atcatcatcaaacatttaccacatcaaagaatcaacatatgttcatttagcaaaaatagcattttagacgattaatcatttacacctagttaatc 23374572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 407
Target Start/End: Original strand, 19921680 - 19921709
Alignment:
Q  378 ctcccacccttaccttagattagatgatcg 407  Q
    ||||||||||||||||||||||||||||||    
T  19921680 ctcccacccttaccttagattagatgatcg 19921709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Complemental strand, 21398659 - 21398631
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  21398659 tcccacccttaccttagattagatgatcg 21398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 21404080 - 21404141
Alignment:
Q  335 acccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||| ||||| |||| | ||| ||||||||||||||||||  ||||| ||||||||||||||    
T  21404080 accctttttcagaattatagactcatgattaaagaaggttag--tcccatccttaccttagatt 21404141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 4327 - 4525
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || |||     
T  4327 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccttttttcg 4426  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||    
T  4427 ggattatatacttatgattaaagaaggttag--tcccacccttaccttaggttagatgatcgcaaggttgtaccgctttctcttctgtgactcttctctt 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 4e-79; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 246 - 445
Target Start/End: Complemental strand, 53646205 - 53646001
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  53646205 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 53646106  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatc-------gcaagattctaccgctttctcttctctgactc 438  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  53646105 ggattacatatttatgattaaagaaggttag--tcccacccttaccttagattagatgatcagactctacaagattctaccgctttctcttctctgactc 53646008  T
Q  439 ttctctt 445  Q
    |||||||    
T  53646007 ttctctt 53646001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 246 - 378
Target Start/End: Complemental strand, 54330453 - 54330321
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  54330453 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 54330354  T
Q  346 ggattacatacttatgattaaagaaggttagtc 378  Q
    ||||||||||||||||||||||||| |||||||    
T  54330353 ggattacatacttatgattaaagaaagttagtc 54330321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 14152546 - 14152446
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  14152546 tcatcggattatctactctttatacaatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaactacaaggttaaaccctttttca 14152447  T
Q  346 g 346  Q
    |    
T  14152446 g 14152446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 246 - 345
Target Start/End: Original strand, 5215552 - 5215651
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  5215552 tcatcggattatctactctatctacaatcaattttagttttaaaccctaattctacaacatcaaaacctattaataactacaaggttaaaccctttttca 5215651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 446
Target Start/End: Original strand, 15566706 - 15566855
Alignment:
Q  303 acatcaaaacctattaacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattaga 401  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||| |  |||||  |||| |||| |||||  |||||||||||| |||||||| |    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttag--tcccacccttactttagattaca 15566803  T
Q  402 tgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||    
T  15566804 tgatcggactcaacaagattctaccgctttctcttctctgactcttctcttc 15566855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21845756 - 21845648
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||||  ||||||||    
T  21845756 aaacctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttag--tcccaccc 21845660  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  21845659 ttaccttagatt 21845648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 48631288 - 48631387
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||| | || ||| ||||||||||||||||||||  |||||||||||||||||    
T  48631288 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttag--tcccacccttaccttag 48631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 189
Target Start/End: Complemental strand, 511789 - 511652
Alignment:
Q  55 aatcatcatcaaacatttaccacatcaaataagtagca--acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccact 151  Q
    ||||||||| |||||| |||  |||||| || ||| ||  ||||||||||||||||||||| ||||| | ||||||||||||||| |||| ||||||||     
T  511789 aatcatcataaaacatatacttcatcaagtaggtaacatcacttcatttagcacaattagcctttgaaacgattaatcatttacgtctagctaatccaca 511690  T
Q  152 tttcatgtatacatatcatagccaaatcaatcatcatt 189  Q
    ||||| |||| ||||||||||| |||| ||||||||||    
T  511689 tttcaagtatgcatatcatagctaaattaatcatcatt 511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 15566418 - 15566486
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacct 314  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  15566418 tcatcagattatctactatttctacgatcaattttagttttaaaccctaattttaccacatcaaaacct 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 24548966 - 24548911
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgact 437  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  24548966 cacccttactttaggttagatgatcgcaaggttctaccgctttctcttctctgact 24548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 50350866 - 50350803
Alignment:
Q  342 ttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    ||||| |||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  50350866 ttcagaattatatactcatgattaaagaaggttagtc--ccacccttaccttagattagatgatcg 50350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 3160731 - 3160623
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| || |||||||| ||| |||||||||||  |||||||| | || || |||| ||||| |||||||||||||||||||||  |||||    
T  3160731 aaacctaatttctataatatcaaaac-tatcaacaactacaaagttaaacccatttttagaattatatactcatgattaaagaaggttagtct--caccc 3160635  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  3160634 ttaccttagatt 3160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 24547243 - 24547290
Alignment:
Q  385 ccttaccttagattagatgatcgcaagattctaccgctttctcttctc 432  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24547243 ccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 446
Target Start/End: Original strand, 6820237 - 6820275
Alignment:
Q  408 caagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6820237 caagattctaccgctttctcttctctgactcttctcttc 6820275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 446
Target Start/End: Original strand, 6159445 - 6159516
Alignment:
Q  382 cacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||||||||||||||       ||||||| |||||||||||||||||| ||||||||||||    
T  6159445 cacccttaccttagattagatgatcggactctacaagattataccgctttctcttctctaactcttctcttc 6159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 446
Target Start/End: Original strand, 11563747 - 11563828
Alignment:
Q  362 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||||| |  ||||||||||||  ||||||||||    
T  11563747 attagagaaggttagtc--ccacccttaccttagattagatgatcggaaggttctacag-gttctcttctctggttcttctcttc 11563828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 511870 - 511825
Alignment:
Q  20 catcgtcactttatatatgtatactcatcatcaaaaatcatcatca 65  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||    
T  511870 catcgtcactttatatatgtatactcgtcataaaaaatcaccatca 511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 17518888 - 17518814
Alignment:
Q  379 tcccacccttaccttagattagatgatcgca-------agattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||| |||||||||||||||||| |       |||||||||||||||||||||| ||| ||||||||||    
T  17518888 tcccacccttgccttagattagatgatcggactctagaagattctaccgctttctcttctatgattcttctcttc 17518814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 17533750 - 17533676
Alignment:
Q  379 tcccacccttaccttagattagatgatcgca-------agattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||| |||||||||||||||||| |       |||||||||||||||||||||| ||| ||||||||||    
T  17533750 tcccacccttgccttagattagatgatcggactctagaagattctaccgctttctcttctatgattcttctcttc 17533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 6156747 - 6156813
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  6156747 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 6156813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 35960943 - 35960877
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  35960943 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 35960877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 40808033 - 40808099
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  40808033 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 40808099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 44274455 - 44274521
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  44274455 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 44274521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 45803483 - 45803440
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  45803483 tcatcggattacctactctttcaacaatcaattttagtttcaaa 45803440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 10289882 - 10289923
Alignment:
Q  107 aattagcatttgaga-gattaatcatttacgcctagttaatc 147  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  10289882 aattagcatgtgagatgattaatcatttacgcctagttaatc 10289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Complemental strand, 14641563 - 14641535
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  14641563 tcccacccttaccttagattagatgatcg 14641535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Original strand, 33565158 - 33565190
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  33565158 tctaccgctttctctcctctgactcttctcttc 33565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 49900767 - 49900795
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  49900767 tcccacccttaccttagattagatgatcg 49900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 459
Target Start/End: Complemental strand, 17978562 - 17978351
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  17978562 tcatcggattatctgctctttctataatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaatcctttttca 17978463  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17978462 ggattacatacttatgattatagaagtttag--tcccacccttaccttagtttagatgatcgcaaggttctaccgctttctcttctctgactcttctctt 17978365  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  17978364 ctcttggtttctcc 17978351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 22474662 - 22474873
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22474662 tcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22474761  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||| ||||||||||||||||||| |||||||||||||    
T  22474762 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctttgactcttctctt 22474859  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  22474860 ctcttggtttctcc 22474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 12037310 - 12037151
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  12037310 tcatcggattatctactctttctacaatcaattttagtttcaaaccctgattctacaacatcaaaagctattaacaactacaaggttaaaccctttttca 12037211  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||    
T  12037210 ggattacatacttatgattaaacaaggttag--tcccacccttaccttatattagatgatcg 12037151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 21579352 - 21579193
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  21579352 tcatcggattatctactctttctacaatcaattttagtttcgaaccctaattctacaacatcaaaacatattaacaactacaaggttaaaccctttttca 21579253  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  21579252 ggattacatacttatgattaaagaaggttag--tcacacccttaccttaaattagatgatcg 21579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 29763014 - 29762855
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  29763014 tcatcgcattatctactctttctacaatcaattttagtttcaaactctaattctacaacatcaaaacttattaacaactacaaggttaaaccctttttca 29762915  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  29762914 ggattacatacttatgattaaagaaggttagttt--cacccttaccttaaattagatgatcg 29762855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 246 - 395
Target Start/End: Complemental strand, 41680279 - 41680132
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  41680279 tcatcggattatctactccttctacagtcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttatca 41680180  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  41680179 ggattacatacttatgattaaagaaggttag--tcccacctttaccttag 41680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 246 - 407
Target Start/End: Original strand, 22208174 - 22208334
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22208174 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 22208273  T
Q  346 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    | |||| |  ||  || |||| |||| | |||  |||||||||||||||||||||||||||||    
T  22208274 gaattatacaacccattattagagaaagctag--tcccacccttaccttagattagatgatcg 22208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 267 - 445
Target Start/End: Complemental strand, 36405257 - 36405085
Alignment:
Q  267 ctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcagg-attacatacttatgatta 365  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  36405257 ctacaatcaattttagtttcaaaccataattctacgacatcaaaacctattaacaactacaaggttaaaccctt-ttcagggattacatacttatgatta 36405159  T
Q  366 aagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    ||||| |||||  || |||||||||||||||||   |||||||||| ||||| ||    ||||| |||||||||||||||    
T  36405158 aagaaagttag--tcacacccttaccttagattgattgatcgcaaggttctatcg----ctcttttctgactcttctctt 36405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 22258453 - 22258293
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||| ||      
T  22258453 tcatcggattatctactctttctacaatcagttttagtttcaaaacctaattctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttg 22258354  T
Q  346 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    | |||| |  ||| || |||| |||| | ||||||  ||||||||||||| ||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtct--cacccttaccttaaattagatgatcg 22258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 446
Target Start/End: Complemental strand, 4380713 - 4380565
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | ||||  |||| |||| |||||||  ||||||||||||||    
T  4380713 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtc--ccacccttacctta 4380617  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    | ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4380616 ggttagatgatcgcaaggttctacggctttctcttctccgactcttctcttc 4380565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 36732424 - 36732347
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  36732424 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttctcttggtttctcc 36732347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 379 - 459
Target Start/End: Original strand, 5761570 - 5761650
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| | ||||||    
T  5761570 tcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctgactcttcccttctcttggtttctcc 5761650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 21514728 - 21514795
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  21514728 tcccacccttaccttaagttagatgatcgcaaggttctaccgctttctcttctccgactcttctcttc 21514795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 22317926 - 22317846
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  22317926 tcccacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctgactcttctcttctcttggtttctcc 22317846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 20879435 - 20879528
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||||||||| ||||| ||||||||| |||||||||| || || |  | ||||||||||||||||||||||||  ||||||||||||||||||||    
T  20879435 aacatcaaaacc-attaataactacaagcttaaacccttttttagaaccatatacttatgattaaagaaggttag--tcccacccttaccttagatt 20879528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 22532147 - 22532066
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcca 460  Q
    ||||||||||||||||||||   ||||||| || ||||| || ||||||||||||||||||||||||| ||| | |||||||    
T  22532147 tcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactcttctcttctcttggtttctcca 22532066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 22536832 - 22536751
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcca 460  Q
    ||||||||||||||||||||   ||||||| || ||||| || ||||||||||||||||||||||||| ||| | |||||||    
T  22536832 tcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactcttctcttctcttggtttctcca 22536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 42265524 - 42265444
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||| ||||   |||||||||| ||| |||||||||| || |||||||||||||||| ||| | ||||||    
T  42265524 tcccacccttaccttggattgattgatcgcaaggttccaccgctttcttttatctgactcttctcttctcttggtttctcc 42265444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 20022055 - 20022016
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctac 418  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20022055 tcccacccttaccttagattagatgatcggaagattctac 20022016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 20517080 - 20517032
Alignment:
Q  348 attacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  20517080 attatatacttatgattaaagaaggttag--tcccacccttaccttagatt 20517032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 20397525 - 20397457
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| | ||||  |||| ||||||  |||||||||||| ||||||||||||||    
T  20397525 tcccacccttaccttagattggttgattacaaggttctacaagctttctcttctatgactcttctcttc 20397457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 21697550 - 21697512
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  21697550 aacatcaaaacctattaacaactacaatgttaaaccctt 21697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Original strand, 38989707 - 38989739
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  38989707 tctaccgctttctctactctgactcttctcttc 38989739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Original strand, 39020804 - 39020836
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  39020804 tctaccgctttctctactctgactcttctcttc 39020836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 251 - 449
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  251 tcatcggattatctactctttctactataaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 350  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||| ||| |||  |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  351 ggattacatacttatgattaaagaagattaatct--cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttttctgactattctctt 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 33360 - 33571
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  33360 tcatcggattatctactatttcaacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacacgtttaaaccctttttca 33459  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||| ||    
T  33460 ggattaaatacttatgattaaagaaggttag--tcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgactcttctatt 33557  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  33558 ctcttggtttctcc 33571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 8969 - 9166
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8969 tcatcgcattatatactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagattaaaccctttttca 9068  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||   || | || ||||||||||||||| ||||||||||||||||    
T  9069 ggattacatacttatgattaaagaaggttag--tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctctt 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 6e-72; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 246 - 446
Target Start/End: Original strand, 14317978 - 14318175
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  14317978 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactgcaaggttaaaccctttttca 14318077  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||| |||   || | || ||||||||||||||||||||||||||||||||    
T  14318078 ggattacatacttatgattaaagaaggtt--tgtcccacccttaccttagatt-gatcgacgaaggactctaccgctttctcttctctgactcttctctt 14318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 14161002 - 14160843
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||    
T  14161002 tcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccccttttca 14160903  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  14160902 ggattacatacttatgattaaagaaggttag--tcccacccttatcttaaattagatgatcg 14160843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 246 - 378
Target Start/End: Complemental strand, 9743225 - 9743093
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  9743225 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaacaactacaaggttaaaccctttttca 9743126  T
Q  346 ggattacatacttatgattaaagaaggttagtc 378  Q
    |||||||||||||||||||||||||||||||||    
T  9743125 ggattacatacttatgattaaagaaggttagtc 9743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 395
Target Start/End: Complemental strand, 15119453 - 15119306
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  15119453 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
     ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  15119353 agattacatacttatgattaaagaaggttag--tcctacccttaccttag 15119306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 43276890 - 43276731
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||    
T  43276890 tcatcggattatttactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccatt-ttca 43276792  T
Q  346 ggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    | |||| |  ||  || |||| |||| |||||  |||||||||||||||| ||||||||||||    
T  43276791 gaattatacaacccattattagagaaagttag--tcccacccttaccttaaattagatgatcg 43276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 459
Target Start/End: Complemental strand, 4690759 - 4690598
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||  || ||||||||||||| |||||||||| ||||| |||| | | ||||  |||| |||| |||||||  ||||| ||||||||    
T  4690759 ttctataacatcaaaag-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtc--ccacctttacctta 4690663  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    | ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | ||||||    
T  4690662 ggttagatgatcgcaaggttctatcgctttctcttctctgactcttctcttctcttggtttctcc 4690598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 446
Target Start/End: Original strand, 43745612 - 43745760
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||  |||| | | || || |||| |||| | |||||  ||||||||||||||    
T  43745612 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtc--ccacccttacctta 43745708  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43745709 ggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttc 43745760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 340
Target Start/End: Complemental strand, 8513898 - 8513806
Alignment:
Q  249 tcggattatctactcttt-ctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    |||||||||||||||||| |||| || | ||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  8513898 tcggattatctactcttttctacaattagttttagtttcaaaccctaattctacagcatcaaaacctataaacaactacaaggttaaaccctt 8513806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 444
Target Start/End: Complemental strand, 48212739 - 48212677
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctct 444  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  48212739 cacccttaccttaggttagatgatcgcaaggttctaccactttctcttctctgactcttctct 48212677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 42565907 - 42565829
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||| |||||||  |||||||||||||||||    
T  42565907 aacaactacaagattaaaccctttttcagaattatatatttatgattaaagaagattagtct--cacccttaccttagatt 42565829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 8135275 - 8135187
Alignment:
Q  355 acttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    ||||| |||||  |||||||||||||  ||||||||||||||||   ||||| |||| |||||||||||| ||||||||| ||||||||||    
T  8135275 acttaggattagtgaaggttagtctc--acccttaccttagattgattgatcacaaggttctaccgctttatcttctctggctcttctctt 8135187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 33060383 - 33060494
Alignment:
Q  284 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 383  Q
    ||||||||| | |||||  |||||||||  ||| |||||| |||| ||||||||||| | ||| |||| | ||| ||||||||||||||||||  |||||    
T  33060383 ttcaaacctaacttctattacatcaaaat-tataaacaacaacaaaattaaacccttttccagaattatagactcatgattaaagaaggttag--tccca 33060479  T
Q  384 cccttaccttagatt 398  Q
    |||||||||||||||    
T  33060480 cccttaccttagatt 33060494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 8488194 - 8488147
Alignment:
Q  293 taattctacaacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  8488194 taattctacagcatcaaaacctataaacaactataaggttaaaccctt 8488147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 20214184 - 20214250
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||||   || || | || ||||||||||||||| |||||||||||||||||    
T  20214184 tcccacccttaccttagattaatcga-cgaaggactctaccgctttctctcctctgactcttctcttc 20214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 24269962 - 24269895
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||| | ||||  |||| ||||||  |||||||||||||||||||| |||||    
T  24269962 tcccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgactctcctctt 24269895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 47095489 - 47095555
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||||||||   ||| || | || ||||||||||||||| |||||||||||||||||    
T  47095489 tcccacccttaccttagattgattga-cgaaggactctaccgctttctctcctctgactcttctcttc 47095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 425
Target Start/End: Complemental strand, 15095652 - 15095606
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttc 425  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||    
T  15095652 tcccacccttaccttagattgattgatcgcaaggttctaccgctttc 15095606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 13132349 - 13132285
Alignment:
Q  381 ccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  13132349 ccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 13132285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Complemental strand, 58428 - 58400
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  58428 tcccacccttaccttagattagatgatcg 58400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Complemental strand, 12127178 - 12127150
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  12127178 tcccacccttaccttagattagatgatcg 12127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 446
Target Start/End: Complemental strand, 14180379 - 14180347
Alignment:
Q  414 tctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||||||    
T  14180379 tctaccgctttctctcctctgactcttctcttc 14180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 19195648 - 19195676
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  19195648 tcccacccttaccttagattagatgatcg 19195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 56882 - 57090
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||   |||| ||||    
T  56882 tcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacatctacaaggtta---cctttttca 56978  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctctt 445  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  56979 ggattacatacttatgattaaagaaggttag--tcccacccttaccttaggttatatgatcgccaggttctaccactttctcttctctgactcttctctt 57076  T
Q  446 ccctttgcttctcc 459  Q
    | ||| | ||||||    
T  57077 ctcttggtttctcc 57090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 174127 - 174274
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  174127 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 174226  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  174227 ggattacatacttatgattaaagaaggttag--tcccacccttactttag 174274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 246 - 446
Target Start/End: Complemental strand, 23968769 - 23968571
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| || ||||    
T  23968769 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacgactacaaggttaaaccttttttca 23968670  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagat-gatcgcaagattctaccgctttctcttctctgactcttctct 444  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| |  | ||| ||| | | || ||||||||||||||| |||||||||||||||    
T  23968669 ggattacatacttatgattaaagaaggttagtct--cacccttacctttggattgatcgat-gaaggactctaccgctttctctcctctgactcttctct 23968573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 14179874 - 14179715
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||| || |||  |||||| || ||||    
T  14179874 tcatcagattatctactctttctacaatcaattttagtttcaaaccctaattccacaacatcaaaatctattaacaagtataaggataaaccttttttca 14179775  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  14179774 ggattacatactcatgattaaagaaggttag--tcccacccttaccttatattagatgatcg 14179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 14183612 - 14183453
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||  |||| | || ||||    
T  14183612 tcatcggattatctaccctttctacaatcaattttagtttcaaaccctaattccacaacatcaaaacctattaacaagtataaggataaatcttttttca 14183513  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg 407  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  14183512 ggattacatactcatgattaaagaaggttag--tcccacccttaccttaaattagatgatcg 14183453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 390
Target Start/End: Original strand, 24717925 - 24718067
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||| |||| |||||| |||||||| | ||||    
T  24717925 tcatcggattatctactctttctacaatcaattttagtttcaaacccgaattctgcaacatcaaaacctattgacaaatacaaggttaaaccccttttca 24718024  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttac 390  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||    
T  24718025 ggattacatacttatgattaaagaatgttag--tcccacccttac 24718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 19647206 - 19647289
Alignment:
Q  313 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||  ||||| |||||||||||    
T  19647206 ctattaacaactacaagattaaaccctttttcagaattatatacttatgattaaagaaggttagtct--cacccataccttagatt 19647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 446
Target Start/End: Complemental strand, 19201230 - 19201148
Alignment:
Q  362 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| |||| |||||||||  ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19201230 attagagaaagttagtctc--acccttaacttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttcccttc 19201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 20006078 - 20005967
Alignment:
Q  284 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 383  Q
    ||||||||| | ||||| ||||||||||  |||||||||| |||| ||||||||||| ||||| |||| | ||| |||||||||||||| |||  |||||    
T  20006078 ttcaaacctaacttctataacatcaaaat-tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggctag--tccca 20005982  T
Q  384 cccttaccttagatt 398  Q
    |||||||||||||||    
T  20005981 cccttaccttagatt 20005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 22502008 - 22502082
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||    
T  22502008 tcccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttttctgactcttctcttc 22502082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 22509942 - 22510016
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||    
T  22509942 tcccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttttctgactcttctcttc 22510016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 28652648 - 28652548
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  ||||||||||| |  ||||||||| ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  28652648 ttctataacatcaaaac-taacaacaactacaaaggctaaaccctttttcagaattacatacttatgattaatgaaggttag--tcccacccttacctta 28652552  T
Q  395 gatt 398  Q
    ||||    
T  28652551 gatt 28652548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 23610663 - 23610730
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||| | ||||||||||    
T  23610663 tcccacccttaccttaggttagatgttcgcaaggttctaccgttttctcttctctaattcttctcttc 23610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 149514 - 149446
Alignment:
Q  381 ccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 442  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  149514 ccacccttaccttagattagatgatcggactctacaagattctaccgctttctcttctctgactcttct 149446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 446
Target Start/End: Complemental strand, 12626488 - 12626367
Alignment:
Q  331 ttaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag-atgatcg-------caagattctaccgct 422  Q
    |||||||||| ||||| |||| | |||||||||||| |||||||||  |||||||||||||||| ||| | |||||||       |||||||||||| ||    
T  12626488 ttaaaccctttttcagaattatacacttatgattaatgaaggttag--tcccacccttaccttacatttgaatgatcggactctacaagattctaccact 12626391  T
Q  423 ttctcttctctgactcttctcttc 446  Q
    |||||||||| |||||||||||||    
T  12626390 ttctcttctccgactcttctcttc 12626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 45535903 - 45535981
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||| |||||||||||||||| ||||| |||| | |||  |||||||||||||||||  ||||||||||||||||||||    
T  45535903 aacaacaacaagattaaaccctttttcagaattatagactcgtgattaaagaaggttag--tcccacccttaccttagatt 45535981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 18388214 - 18388151
Alignment:
Q  368 gaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctct 433  Q
    |||||||||||||  ||||||||||||||||   |||||||||| |||||||||||||||||||||    
T  18388214 gaaggttagtctc--acccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 43938684 - 43938779
Alignment:
Q  55 aatcatcatcaaacatttaccacatcaaataagtagca--acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 147  Q
    ||||||||||||||||||||||||||||| ||||| ||   |||||||||||| || || ||||| ||| |||||| ||||||| |||||| ||||    
T  43938684 aatcatcatcaaacatttaccacatcaaagaagtaacatctcttcatttagcaaaaataacattttagacgattaaccatttacacctagtcaatc 43938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 149652 - 149585
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaa-ttctacaacatcaaaac 312  Q
    ||||||||||| |||||||||| || |||||||||| ||||||||| ||| ||||| |||||||||||    
T  149652 tcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaac 149585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 375
Target Start/End: Complemental strand, 25584358 - 25584280
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggtta 375  Q
    ||||| ||||||||||| ||| | |||| ||||| |||||||||| ||||| |||| ||||| |||||||||||||||||    
T  25584358 ttctataacatcaaaac-tatcatcaacgacaaggttaaaccctttttcagaattatatactcatgattaaagaaggtta 25584280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 12626578 - 12626527
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaatt 297  Q
    ||||||||||| |||||||||| || |||||||||||||||||| | |||||    
T  12626578 tcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 12626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 24516223 - 24516289
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  24516223 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 24516289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 22260082 - 22260155
Alignment:
Q  386 cttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||   ||||||||||| ||||||| |||||||  |||||||||| ||||| ||| | ||||||    
T  22260082 cttaccttagattgattgatcgcaagactctaccgttttctctcttctgactcttttcttctcttggtttctcc 22260155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 17307523 - 17307551
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  17307523 tcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 21369330 - 21369358
Alignment:
Q  379 tcccacccttaccttagattagatgatcg 407  Q
    |||||||||||||||||||||||||||||    
T  21369330 tcccacccttaccttagattagatgatcg 21369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 27609183 - 27609151
Alignment:
Q  20 catcgtcactttatatatgtatactcatcatca 52  Q
    ||||||||||||||| |||||||||||||||||    
T  27609183 catcgtcactttataaatgtatactcatcatca 27609151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 246 - 398
Target Start/End: Original strand, 62624 - 62774
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  62624 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccacaaggttaaaccctttttca 62723  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  62724 ggattacatacttatgattaaagaaggttagtct--catccttaccttagatt 62774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 246 - 395
Target Start/End: Complemental strand, 10592 - 10445
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  10592 tcatcgtattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccctttttca 10493  T
Q  346 ggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  10492 ggattacatacttatgattaaagaaggttag--tcccacccttaccttag 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 3853 - 3927
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||||||||| | ||||| |||| |||||||||||||||||||| |||||||||||| |  || ||||||||||||||    
T  3853 aacaactacatg-ttaaatcctttttcaggattacatacttatgtttaaagaaggttgg--tcacacccttaccttag 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 246 - 459
Target Start/End: Original strand, 6322 - 6535
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaaca-tcaaaacctattaacaactacaagattaaacccttcttc 344  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||| ||||| |||    
T  6322 tcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacattaaaaacctataaacaactacaagattaatccctttttc 6421  T
Q  345 aggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctc 443  Q
    || ||||||  ||| || |||| |||| | ||||||   ||||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||    
T  6422 agaattacacaactcattattagagaaagctagtct--tacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgaatcttctc 6519  T
Q  444 ttccctttgcttctcc 459  Q
    ||| ||| | ||||||    
T  6520 ttctcttggtttctcc 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 5536 - 5630
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5536 tcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactacaaagttaaaccctt 5630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 297 - 443
Target Start/End: Complemental strand, 6514 - 6371
Alignment:
Q  297 tctacaacatcaaaacctattaacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    |||| ||||||||||| ||  ||||||||||| | |||||||||| || || ||||||||||||||||||| |||||||||||  |||||||||||||||    
T  6514 tctataacatcaaaac-taacaacaactacaaaggttaaacccttttt-agaattacatacttatgattaatgaaggttagtc--ccacccttaccttag 6419  T
Q  396 attagatgatcgcaagattctaccgctttctcttctctgactcttctc 443  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6418 gttagatgatcgcaaggttctaccgctttctcttctctgactcttctc 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 246 - 365
Target Start/End: Complemental strand, 440 - 321
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    ||||||||||||||| ||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||      
T  440 tcatcggattatctaatctttttatgatcaattttagtttccaaccttaattttacaacatcaaaacctattaacaactacaatgttaaacccttttttt 341  T
Q  346 ggattacatacttatgatta 365  Q
    |||| |||||||||||||||    
T  340 ggatgacatacttatgatta 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 590 - 683
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccct 339  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  590 tcatcggattatatactctttctatgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaatgttaaaccct 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 20105 - 20199
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaaccctt 340  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  20105 tcatcggattatctattctttctacaatcaattttaatttcaaaccctaattctaaaacatcaaaacctattaacaactacaaggttaaaccctt 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 38588 - 38438
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattt-tagtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttc 344  Q
    |||| |||||| |||| ||||| || ||||| || || ||| |||||| | ||||| ||||||||||| ||||||||||||||| ||||||||||| |||    
T  38588 tcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttctataacatcaaaac-tattaacaactacaaaattaaaccctttttc 38490  T
Q  345 aggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    || |||| ||||| ||||||||||||||||||  || |||||||||||||||||    
T  38489 agaattatatactcatgattaaagaaggttag--tcacacccttaccttagatt 38438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 8e-25; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 169346 - 169408
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaaccttaattctacaacatca 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  169346 tcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatca 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 400
Target Start/End: Original strand, 17078 - 17163
Alignment:
Q  313 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag 400  Q
    |||| |||||||||||  |||||||||| || || |||| ||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  17078 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcg--tcccacccttaccttagattag 17163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 400
Target Start/End: Original strand, 26609 - 26694
Alignment:
Q  313 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattag 400  Q
    |||| |||||||||||  |||||||||| || || |||| ||||| ||||||||||||| || |  ||||||||||||||||||||||    
T  26609 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcg--tcccacccttaccttagattag 26694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 382 - 459
Target Start/End: Original strand, 18315 - 18392
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  18315 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttctcttctcttggtttctcc 18392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 28686 - 28769
Alignment:
Q  313 ctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  28686 ctattaacaactacaagattaaacgctttttcagaattatatacttatgattaaagaaggttag--tcccactcttaccttagatt 28769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 400
Target Start/End: Original strand, 31877 - 31987
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||||||||||||||| |||||||||||| || ||||||||||| ||||| || | ||||| ||||||||||| |||||||||  |||||    
T  31877 aaacctaacttctacaacatcaaaac-tattaacaactataaaattaaaccctttttcagaatcatatactcatgattaaagatggttagtct--caccc 31973  T
Q  387 ttaccttagattag 400  Q
    ||||||||||||||    
T  31974 ttaccttagattag 31987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 32038 - 32100
Alignment:
Q  330 attaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||||||||| ||||| || | ||||| ||||||||||||||||||   |||||||||||||||    
T  32038 attaaaccctttttcagaatcatatactcatgattaaagaaggttag--ccccacccttacctta 32100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 450
Target Start/End: Complemental strand, 18036 - 17877
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| ||||| |||| ||||| |||| | | ||||  |||| |||| |||||||  ||||||||||||||    
T  18036 ttctataacatcaaaac-taacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtc--ccacccttacctta 17940  T
Q  395 gattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttccctt 450  Q
    |||||||||||||       ||||||||||||| |||||||||||||||||||||||||||||    
T  17939 gattagatgatcggattctacaagattctaccgttttctcttctctgactcttctcttccctt 17877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 459
Target Start/End: Original strand, 49686 - 49847
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttag 395  Q
    ||||| ||||||||||| ||| |||||  | || ||||||||||| ||||| ||||   ||| ||||||||||||||||||||  |||||||||||||||    
T  49686 ttctataacatcaaaac-tatcaacaaaaataaaattaaaccctttttcagaattatggactcatgattaaagaaggttagtc--ccacccttaccttag 49782  T
Q  396 attagatgatcgcaagattctacc-gctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||| | ||||  |||| ||||||  ||||||||||||||||||||||||||| ||| | ||||||    
T  49783 attggttgattacaaggttctacaagctttctcttctctgactcttctcttctcttggtttctcc 49847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 3152 - 3260
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||  |||| ||||| ||||||||||||||||||  ||||||||    
T  3152 aaacctaacttctataacatcaaaac-tatcaacaactacaaaattaaaccctttttcataattatatactcatgattaaagaaggttag--tcccaccc 3248  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  3249 ttaccttagatt 3260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 23561 - 23669
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| ||||||||||| ||||||||||||||| ||||||||||| || || |||| ||||| ||||||||||||||| ||  ||||||||    
T  23561 aaacctaacttctataacatcaaaac-tattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcag--tcccaccc 23657  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  23658 ttaccttagatt 23669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 459
Target Start/End: Original strand, 26764 - 26844
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||| ||||||   |||||||||| |||||||||||||||||||||  ||| ||||||| ||| | ||||||    
T  26764 tcccacccttaccgtagattgattgatcgcaaggttctaccgctttctcttctctagctcatctcttctcttggtttctcc 26844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 328303 - 328223
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| | ||||||    
T  328303 tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctcactcttcccttctcttggtttctcc 328223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 30436 - 30532
Alignment:
Q  93 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatcatagccaaatcaatcatcatt 189  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||| || |||||||    
T  30436 acttcatttattacaattagcatttgaaacgattaatcatttacgcctagttaatccacattt-aagtatacatatcgtagccaaattaaccatcatt 30532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 2275 - 2162
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattct 416  Q
    |||||||||||| |||||||||| ||||| |||| | | ||||  |||| ||||  ||||||  ||||||||||||||| ||||||||||||||| ||||    
T  2275 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtc--ccacccttaccttaggttagatgatcgcaaggttct 2178  T
Q  417 accgctttctcttctc 432  Q
    ||||||||||||||||    
T  2177 accgctttctcttctc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 5380 - 5267
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattct 416  Q
    |||||||||||| |||||||||| || || |||| |  |||||  |||| |||| |||||  ||||||||||||||||| ||||||||||||||| ||||    
T  5380 aacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttag--tcccacccttaccttaggttagatgatcgcaaggttct 5283  T
Q  417 accgctttctcttctc 432  Q
    ||||||||||||||||    
T  5282 accgctttctcttctc 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 5223 - 5170
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctc 432  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5223 tcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 158837 - 158757
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||||||||   |||||||||| || ||||||||||||||||||||||||||||||| ||| | ||||||    
T  158837 tcccacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctgactcttctcttctcttggtttctcc 158757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 18716 - 18635
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||| |||||||||| | ||||  |||| ||||||  ||||||||||||||||||||| ||||| ||| | ||||||    
T  18716 tcccaccctcaccttagattggttgattacaaggttctacaagctttctcttctctgactcttttcttctcttggtttctcc 18635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 38 - 181
Alignment:
Q  251 ggattatctactctttctacgatcaatttt-agtttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggat 349  Q
    |||||| |||||||||| || ||||||||| | ||| || ||| | ||||| ||||||||||| |||||||||||||||  | |||||||| ||||| |     
T  38 ggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaac-tattaacaactacaaattaaaaccctttttcagaac 136  T
Q  350 tacatacttatgattaaagaaggttagtctcccacccttaccttaga 396  Q
     | ||||| ||||||||||||||||||  ||||||||||||||||||    
T  137 catatactaatgattaaagaaggttag--tcccacccttaccttaga 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 7618 - 7510
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| ||||||||||| ||| |||||||| || ||||||||||| ||||| || | ||||| || |||||||||||||||  ||||||||    
T  7618 aaacctaacttctataacatcaaaac-tatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttag--tcccaccc 7522  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  7521 ttaccttagatt 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 12548 - 12474
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  12548 tcccacccttaccttggattagatgatcggactctacaagattctaccgctttctcttctctgactcttctcttc 12474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 59760 - 59652
Alignment:
Q  287 aaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccaccc 386  Q
    |||||| | ||||| || |||||||| ||| |||||||||||  |||||||||| ||||| |||| ||||| ||||||||||||||||||   |||||||    
T  59760 aaacctaatttctataatatcaaaac-tatcaacaactacaaagttaaaccctttttcagaattatatactcatgattaaagaaggttag--acccaccc 59664  T
Q  387 ttaccttagatt 398  Q
    ||||||||||||    
T  59663 ttaccttagatt 59652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 2029 - 1947
Alignment:
Q  314 tattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagatt 398  Q
    |||||||||| |||| ||||||||||| ||||| |||| | ||| ||||||||||||||||||  ||||||| ||||||||||||    
T  2029 tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttag--tcccaccgttaccttagatt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 405
Target Start/End: Original strand, 28528 - 28614
Alignment:
Q  318 aacaactacaa-gattaaacccttcttcaggattacatacttatgattaaagaaggttagtctcccacccttaccttagattagatgat 405  Q
    ||||||||||| | |||||||||| ||||| |||| ||||| |||||||| |||||||||  |||||| ||||||||||||||||||||    
T  28528 aacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttag--tcccactcttaccttagattagatgat 28614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 552 - 663
Alignment:
Q  284 ttcaaaccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacatacttatgattaaagaaggttagtctccca 383  Q
    ||||||||| | ||||| ||||||||||  ||| |||||| |||| |||||||| || || || |||| | ||| ||||||||||||||||||  |||||    
T  552 ttcaaacctaacttctataacatcaaaat-tatcaacaacaacaaaattaaaccatttttaagaattatagactcatgattaaagaaggttag--tccca 648  T
Q  384 cccttaccttagatt 398  Q
    |||||||||||||||    
T  649 cccttaccttagatt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 11193 - 11261
Alignment:
Q  382 cacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctc 443  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  11193 cacccttaccttagattagatgatcggactctacaagattctaccgctttctcgtctctgactcttctc 11261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 445
Target Start/End: Complemental strand, 61922 - 61790
Alignment:
Q  318 aacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttaccttagattagatgatcg-------ca 409  Q
    |||||||||||| ||||| |||| ||||| |||| | | ||||  |||| |||| |||||||||  |||||||||||||||||||||||||       ||    
T  61922 aacaactacaaggttaaatcctt-ttcagaattatacaacttagaattagagaaagttagtctc--acccttaccttagattagatgatcggattctaca 61826  T
Q  410 agattctaccgctttctcttctctgactcttctctt 445  Q
    ||||||||||||||||| ||||||||||||| ||||    
T  61825 agattctaccgctttcttttctctgactcttatctt 61790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 2918 - 2992
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttctcttc 446  Q
    ||||||||||||||||||||| ||||||        ||||||||||||| |||||||||||||||||||||||||    
T  2918 tcccacccttaccttagattaaatgatcagactctacaagattctaccgttttctcttctctgactcttctcttc 2992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 407
Target Start/End: Original strand, 19157 - 19272
Alignment:
Q  290 ccttaattctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattaca-tacttatgattaaagaaggttagtctcccaccctt 388  Q
    ||||| ||||| ||||||||||| || ||||||||||||| |||||||||| ||||| |||| |  |||||  |||| |||| |||||  ||||||||||    
T  19157 ccttatttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttag--tcccaccctt 19253  T
Q  389 accttagattagatgatcg 407  Q
    || ||||||||||| ||||    
T  19254 acgttagattagatcatcg 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  302 aacatcaaaacctattaacaactacaagattaaacccttcttca 345  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 17799 - 17893
Alignment:
Q  56 atcatcatcaaacatttaccacatcaaataagtagcaact--tcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatc 147  Q
    |||||||||||||||||||||||||||| ||  | ||  |  |||||||||| || |||||||| ||| |||||||||||||| |||||||||||    
T  17799 atcatcatcaaacatttaccacatcaaagaatcaacatatgttcatttagcaaaaatagcattttagacgattaatcatttacacctagttaatc 17893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 14092 - 14015
Alignment:
Q  93 acttcatttagcacaattagcatttgaga-gattaatcatttacgcctagttaatccacttttcatgtatacatatca 169  Q
    |||||||||| || ||||||||||  ||| ||||||||||||| ||||||||||||||| ||||| || | |||||||    
T  14092 acttcatttaacaaaattagcattaaagacgattaatcatttatgcctagttaatccacatttcaggtttgcatatca 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 459
Target Start/End: Original strand, 8679 - 8758
Alignment:
Q  379 tcccacccttaccttagattagat-gatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||||||||||| ||| ||| | |||| ||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  8679 tcccacccttaccttagatt-gatcgat-gtaagactctaccgctttctctcctctgactcttctcttctcttggtttctcc 8758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 446
Target Start/End: Original strand, 35512 - 35593
Alignment:
Q  362 attaaagaaggttagtctcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| |||| |||||||||  |||||||||||||||| ||| |||| | || ||||||||||||||  |||||||||||||||||    
T  35512 attagagaaagttagtctc--acccttaccttagatt-gatcatcgaaggactctaccgctttctcacctctgactcttctcttc 35593  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 26649 - 26568
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctacc-gctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    |||||||||||| ||||||| | ||||  |||| ||||||  ||||||||||||||||||||||||||| ||| | ||||||    
T  26649 tcccacccttactttagattggttgattacaaggttctacaagctttctcttctctgactcttctcttctcttggtttctcc 26568  T

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Target: scaffold1186 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 446
Target Start/End: Original strand, 1976 - 2123
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  1976 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 2072  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  2073 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 2123  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 18655 - 18586
Alignment:
Q  379 tcccacccttaccttagattagatgatcg-------caagattctaccgctttctcttctctgactcttct 442  Q
    |||||||||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||||    
T  18655 tcccacccttaccttagattagatgatcggactctacaagattct-tcgctttctcttctctgactcttct 18586  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 446
Target Start/End: Complemental strand, 186292 - 186145
Alignment:
Q  296 ttctacaacatcaaaacctattaacaactacaagattaaacccttcttcaggattacata-cttatgattaaagaaggttagtctcccacccttacctta 394  Q
    ||||| ||||||||||| ||  |||||||||||| |||||||||| ||||| |||| | | |  || |||| |||| | |||||||  ||||||||||||    
T  186292 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctc--acccttacctta 186196  T
Q  395 gattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  186195 gatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 186145  T

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Target: scaffold1941 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 175 - 241
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  175 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 241  T

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Target: scaffold0802 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 4724 - 4658
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttc 446  Q
    |||||||||||||||||||| |||   || | || ||||||||||||||| |||||||||||||||||    
T  4724 tcccacccttaccttagatt-gatcgacgaaggactctaccgctttctctcctctgactcttctcttc 4658  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 1073 - 1034
Alignment:
Q  379 tcccacccttaccttagattagatgatcgcaagattctac 418  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  1073 tcccacccttaccttagattagatgatcggaaggttctac 1034  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 2146 - 2189
Alignment:
Q  246 tcatcggattatctactctttctacgatcaattttagtttcaaa 289  Q
    ||||||||||| |||||||||| || ||||||||||||||||||    
T  2146 tcatcggattacctactctttcaacaatcaattttagtttcaaa 2189  T

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Target: scaffold0485 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 4457 - 4496
Alignment:
Q  44 tcatcatcaaaaatcatcatcaaacatttaccacatcaaa 83  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  4457 tcatcatcaataatcatcatcaaacaattaccacatcaaa 4496  T

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Target: scaffold0308 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 13483 - 13557
Alignment:
Q  385 ccttaccttagattagatgatcgcaagattctaccgctttctcttctctgactcttctcttccctttgcttctcc 459  Q
    ||||||||||||||   ||||||||   || |||| |||||||||||||||||||||||||| ||| | ||||||    
T  13483 ccttaccttagattgattgatcgcagagttttaccactttctcttctctgactcttctcttctcttggtttctcc 13557  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 8758 - 8722
Alignment:
Q  382 cacccttaccttagattagatgatcgcaagattctac 418  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  8758 cacccttaccttagattagatgatcggaaggttctac 8722  T

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