View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5082_low_3 (Length: 548)

Name: NF5082_low_3
Description: NF5082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5082_low_3
NF5082_low_3
[»] chr5 (7 HSPs)
chr5 (9-532)||(11698940-11699463)
chr5 (328-373)||(35777109-35777154)
chr5 (326-373)||(2532595-2532642)
chr5 (328-373)||(7762337-7762382)
chr5 (327-372)||(1039841-1039886)
chr5 (328-373)||(2532020-2532065)
chr5 (328-373)||(13568169-13568214)
[»] chr2 (7 HSPs)
chr2 (326-373)||(7190044-7190091)
chr2 (328-373)||(43870215-43870260)
chr2 (328-373)||(28137791-28137836)
chr2 (327-369)||(17688219-17688261)
chr2 (328-373)||(39377635-39377680)
chr2 (325-373)||(1149403-1149451)
chr2 (329-373)||(29093927-29093971)
[»] chr3 (11 HSPs)
chr3 (328-373)||(43476125-43476170)
chr3 (324-372)||(42166504-42166552)
chr3 (327-373)||(43478924-43478970)
chr3 (325-373)||(1388198-1388246)
chr3 (328-366)||(48250970-48251008)
chr3 (328-373)||(5138361-5138406)
chr3 (328-373)||(16484550-16484595)
chr3 (328-373)||(47074204-47074249)
chr3 (328-372)||(4331914-4331958)
chr3 (328-372)||(8475761-8475805)
chr3 (328-372)||(52387719-52387763)
[»] chr8 (12 HSPs)
chr8 (325-373)||(43262356-43262404)
chr8 (328-373)||(34366846-34366891)
chr8 (327-373)||(44052320-44052366)
chr8 (328-373)||(7577682-7577727)
chr8 (325-370)||(10749770-10749815)
chr8 (327-372)||(28694513-28694558)
chr8 (327-369)||(27704628-27704670)
chr8 (327-373)||(41250165-41250211)
chr8 (328-373)||(7577050-7577095)
chr8 (328-373)||(39601638-39601683)
chr8 (328-373)||(39604413-39604458)
chr8 (328-372)||(45409806-45409850)
[»] chr4 (7 HSPs)
chr4 (326-373)||(51492004-51492051)
chr4 (327-373)||(44674098-44674144)
chr4 (329-372)||(16473774-16473817)
chr4 (326-373)||(37015863-37015910)
chr4 (327-372)||(37880597-37880642)
chr4 (328-372)||(37880661-37880705)
chr4 (325-373)||(56138178-56138226)
[»] chr7 (7 HSPs)
chr7 (327-373)||(47741713-47741759)
chr7 (328-370)||(46738736-46738778)
chr7 (328-373)||(17834422-17834467)
chr7 (322-373)||(36185650-36185701)
chr7 (328-373)||(36185124-36185169)
chr7 (328-373)||(40323202-40323247)
chr7 (328-373)||(40323725-40323770)
[»] chr1 (17 HSPs)
chr1 (328-373)||(46320547-46320592)
chr1 (328-373)||(50117907-50117952)
chr1 (324-371)||(16281688-16281735)
chr1 (326-373)||(32161386-32161433)
chr1 (328-373)||(253028-253073)
chr1 (328-373)||(15354652-15354697)
chr1 (328-373)||(20114539-20114584)
chr1 (328-373)||(26944413-26944458)
chr1 (326-373)||(44596793-44596840)
chr1 (326-373)||(46319682-46319729)
chr1 (328-373)||(253371-253416)
chr1 (328-365)||(471165-471202)
chr1 (328-373)||(27487730-27487775)
chr1 (328-373)||(32160666-32160711)
chr1 (328-373)||(33206097-33206142)
chr1 (328-373)||(44599000-44599045)
chr1 (328-373)||(51271685-51271730)
[»] chr6 (5 HSPs)
chr6 (328-373)||(11687986-11688031)
chr6 (327-373)||(117928-117974)
chr6 (327-373)||(28362828-28362874)
chr6 (328-373)||(11687393-11687438)
chr6 (328-373)||(29061230-29061275)
[»] scaffold0116 (1 HSPs)
scaffold0116 (326-372)||(16050-16096)
[»] scaffold0206 (1 HSPs)
scaffold0206 (328-373)||(13301-13346)
[»] scaffold0184 (1 HSPs)
scaffold0184 (320-373)||(17957-18010)
[»] scaffold0078 (1 HSPs)
scaffold0078 (320-373)||(54834-54887)


Alignment Details
Target: chr5 (Bit Score: 491; Significance: 0; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 9 - 532
Target Start/End: Original strand, 11698940 - 11699463
Alignment:
Q  9 attattctattattaaacctacaaattagaagtttatacattcaagtttagattcaaagatccggattttagtcttcttgatgtttttggaggaagataa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11698940 attattctattattaaacctacaaattagaagtttatacattcaagtttagattcaaagatccggattttagtcttcttgatatttttggaggaagataa 11699039  T
Q  109 atgtcaatacgtccgtaaatatttctctatttgtaagattttctctaccttgaactgagacatcatcctctcactttaaatttatctcataaaagaaatt 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699040 atgtcaatacgtctgtaaatatttctctatttgtaagattttctctaccttgaactgagacatcatcctctcactttaaatttatctcataaaagaaatt 11699139  T
Q  209 aaataaaaagagttttaaaatttcatatcacaccaaagtgaattactatataatcttatttttaagtatactactactattaatccttcaaagaagtata 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699140 aaataaaaagagttttaaaatttcatatcacaccaaagtgaattactatataatcttatttttaagtatactactactattaatccttcaaagaagtata 11699239  T
Q  309 ctgtggactacaatatttagagaattgatgttctcacattacataaggttgtgccacacgagtaacgtgggaacagcaattcaccaatatttattacttt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11699240 ctgtggactacaatatttagagaattgatgttctcacattacataaggttgtgccacacgagtaatgtgggaacagcaattcaccaatatttattacttt 11699339  T
Q  409 tttgtttgacaaattaatcaaaatatttattactattaatccnnnnnnngaatacaacacaacagcttaaccaacacaagtgcgaaacagggtcgtcgtc 508  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11699340 tttgtttgacaaattaatcaaaatatttattactattaatcctttttttgaatacaacacaacagcttaaccaacacaagtgcgaaacagggtcgtcgtc 11699439  T
Q  509 ttcttcctccagcagcatcgttct 532  Q
    ||||||||||||||||||||||||    
T  11699440 ttcttcctccagcagcatcgttct 11699463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 35777154 - 35777109
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  35777154 gagaattgatgttcccacgttacataaggttgtgccacacgagtaa 35777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 2532642 - 2532595
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  2532642 tagagaattgctgttcccacattacataaggctgtgccacacgagtaa 2532595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 7762382 - 7762337
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  7762382 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 7762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 1039886 - 1039841
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    ||||||||||||||  ||| |||||||| |||||||||||||||||    
T  1039886 agagaattgatgtttacactttacataaagttgtgccacacgagta 1039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 2532020 - 2532065
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| |||||||||| |||||    
T  2532020 gagaattgttgttcccacattacataaggctgtgccacacaagtaa 2532065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 13568214 - 13568169
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||| ||||||||    
T  13568214 gagaattgttgttcccacattacataaggctgtgccatacgagtaa 13568169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 7190091 - 7190044
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7190091 tagagaattgatgttcccacattacataaggttgtgccacacgagtaa 7190044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 43870260 - 43870215
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  43870260 gagaattgatgttcccacattacataaggttgtgccacacgagtaa 43870215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 28137791 - 28137836
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||    
T  28137791 gagaattgctgttcccacattatataaggttgtgccacacgagtaa 28137836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 17688219 - 17688261
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacga 369  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||    
T  17688219 agagaattgctgttcccacattacataaggctgtgccacacga 17688261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 39377635 - 39377680
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||  |||||||||||||| ||||||||||||||||    
T  39377635 gagaattgctgtttccacattacataaggctgtgccacacgagtaa 39377680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 1149403 - 1149451
Alignment:
Q  325 ttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||||| ||||| ||||||  ||||||||||||||||| |||||    
T  1149403 ttagagaattgttgttcccacatttgataaggttgtgccacactagtaa 1149451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 29093971 - 29093927
Alignment:
Q  329 agaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||| ||||| |||||||||||||| |||| |||||||||||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaa 29093927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 43476125 - 43476170
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  43476125 gagaattgttgttctcacattacataaggttgtgccacacgagtaa 43476170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 42166552 - 42166504
Alignment:
Q  324 tttagagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  42166552 tttagagaattgatgtttacacattacataaggttgtgccacacgagta 42166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 43478970 - 43478924
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  43478970 agagaattgttgttcccacattacataaggttgtgccacacgagtaa 43478924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 1388246 - 1388198
Alignment:
Q  325 ttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  1388246 ttagagaattgttgttcccacattacataaggctgtgccacacaagtaa 1388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 48251008 - 48250970
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccaca 366  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  48251008 gagaattgttgttcccacattacataaggttgtgccaca 48250970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 5138406 - 5138361
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  5138406 gagaattgctgttcccacatgacataaggctgtgccacacgagtaa 5138361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 16484595 - 16484550
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||| | ||||||||||| |||||||||||||||||||    
T  16484595 gagaattgttgtacccacattacatagggttgtgccacacgagtaa 16484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 47074249 - 47074204
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| |||||||| ||||||||| ||| ||||||||||||||    
T  47074249 gagaattgttgttctcatattacataatgttctgccacacgagtaa 47074204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 4331958 - 4331914
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||    
T  4331958 gagaattgctgtttacacattacataaggctgtgccacacgagta 4331914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 8475761 - 8475805
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||| ||||  || |||||||||||||||||||||||||||    
T  8475761 gagaattgctgtttacatattacataaggttgtgccacacgagta 8475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 52387719 - 52387763
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||| ||||  |||||||||||||||||||||||| |||||    
T  52387719 gagaattgctgtttgcacattacataaggttgtgccacatgagta 52387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 43262356 - 43262404
Alignment:
Q  325 ttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43262356 ttagagaattgttgttctcacattacataaggctgtgccacacgagtaa 43262404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 34366846 - 34366891
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  34366846 gagaattgatgttcccacattacataaggctgtgccacacgagtaa 34366891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 44052366 - 44052320
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  44052366 agagaattgttgttcccacattacataaggttgtggcacacgagtaa 44052320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 7577727 - 7577682
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  7577727 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 7577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 10749815 - 10749770
Alignment:
Q  325 ttagagaattgatgttctcacattacataaggttgtgccacacgag 370  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  10749815 ttagagaattgctgtttacacattacataaggttgtgccacacgag 10749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 28694558 - 28694513
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  28694558 agagaattgctgttaacacattacataaggttgtgccacacgagta 28694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 27704670 - 27704628
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacga 369  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||    
T  27704670 agagaattgctgttcccacattacataaggctgtgccacacga 27704628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 41250211 - 41250165
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| ||||| |||||| |||||||||||| |||||||||||    
T  41250211 agagaattgttgttcccacattgcataaggttgtggcacacgagtaa 41250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 7577050 - 7577095
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  7577050 gagaattgctgttcccacattacataaggctgtgccacatgagtaa 7577095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 39601638 - 39601683
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| | ||| |||||||||||||| ||||||||||||||||    
T  39601638 gagaattgctattcccacattacataaggctgtgccacacgagtaa 39601683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 39604458 - 39604413
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||| | |||||||||||||| ||||||||||||||||    
T  39604458 gagaattgttgtccccacattacataaggctgtgccacacgagtaa 39604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 45409806 - 45409850
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||    
T  45409806 gagaattgctgtttacacattacataaggctgtgccacacgagta 45409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 51492004 - 51492051
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  51492004 tagagaattgttgttcccacattacataaggttgtgccacacgagtaa 51492051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 44674098 - 44674144
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  44674098 agagaattgttgttcccacattacataaggttgtgccacacgagtaa 44674144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 16473817 - 16473774
Alignment:
Q  329 agaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||    
T  16473817 agaattgctgtttacacattacataaggttgtgccacacgagta 16473774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 37015863 - 37015910
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  37015863 tagagaattgttgttcccacattacataaggatgtgccacatgagtaa 37015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 37880597 - 37880642
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    ||||||||| ||||  |||||||||||||| |||||||||||||||    
T  37880597 agagaattgctgtttacacattacataaggctgtgccacacgagta 37880642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 37880705 - 37880661
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||    
T  37880705 gagaattgttgtttacacattacataaggctgtgccacacgagta 37880661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 56138178 - 56138226
Alignment:
Q  325 ttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||||| ||||| ||||||  ||||||||||||||||| |||||    
T  56138178 ttagagaattgctgttcccacatttgataaggttgtgccacactagtaa 56138226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 47741713 - 47741759
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  47741713 agagaattgttgttctcacattacataaggttgtgccacactagtaa 47741759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 46738736 - 46738778
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgag 370  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  46738736 gagaattgttgttcccacattacataaggttgtgccacacgag 46738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 17834422 - 17834467
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||    
T  17834422 gagaattgatgtttacacattacataaggctgtgccacacgagtaa 17834467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 36185701 - 36185650
Alignment:
Q  322 tatttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||| ||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  36185701 tattaagagaattgctgtttccacattacataaggctgtgccacacgagtaa 36185650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 36185124 - 36185169
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| | ||| |||||| ||||||||||||||||||||||||    
T  36185124 gagaattgcttttcccacattccataaggttgtgccacacgagtaa 36185169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 40323202 - 40323247
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  40323202 gagaattgttgttcccacattacataaggctgtgccacatgagtaa 40323247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 40323770 - 40323725
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| |||||||||| |||||    
T  40323770 gagaattgctgttcccacattacataaggctgtgccacacaagtaa 40323725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 46320592 - 46320547
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  46320592 gagaattgctgttcccacattacataaggttgtgccacacgagtaa 46320547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 50117952 - 50117907
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  50117952 gagaattgctgttcccacattacataaggttgtgccacacgagtaa 50117907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 16281688 - 16281735
Alignment:
Q  324 tttagagaattgatgttctcacattacataaggttgtgccacacgagt 371  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  16281688 tttagagaattgatgttcccacattacataaggttgtggcacatgagt 16281735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 32161433 - 32161386
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  32161433 tagagaattgttgttcccacattacataaggctgtgccacacgagtaa 32161386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 253028 - 253073
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  253028 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 253073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 15354697 - 15354652
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||    
T  15354697 gagaattgctgttcccacattacataaggttgtgtcacacgagtaa 15354652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 20114539 - 20114584
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  20114539 gagaattgttgttcccacattacataaggctgtgccacacgagtaa 20114584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 26944413 - 26944458
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  26944413 gagaattgttgttcccacattacataaggctgtgccacacgagtaa 26944458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 44596793 - 44596840
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  44596793 tagagaattgttgttcccacattacataagactgtgccacacgagtaa 44596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 46319682 - 46319729
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||| ||||| ||||||||||| || ||||||||||||||||    
T  46319682 tagagaattgttgttcccacattacatatggctgtgccacacgagtaa 46319729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 253416 - 253371
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||| ||||| ||||||||||||||||    
T  253416 gagaattgttgttcccacattacgtaaggctgtgccacacgagtaa 253371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 471202 - 471165
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccac 365  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  471202 gagaattgttgttcccacattacataaggttgtgccac 471165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 27487775 - 27487730
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||||    
T  27487775 gagaattgatgttcccacatttgataaggttgtggcacacgagtaa 27487730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 32160666 - 32160711
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| || || |||||||||||||| ||||||||||||||||    
T  32160666 gagaattgctgatcccacattacataaggctgtgccacacgagtaa 32160711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 33206142 - 33206097
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||||    
T  33206142 gagaattgctgttcccacattacataagactgtgccacacgagtaa 33206097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 44599045 - 44599000
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||| | ||||||||||| |||||||||||||||||||    
T  44599045 gagaattgttgtacccacattacatagggttgtgccacacgagtaa 44599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 51271730 - 51271685
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| || ||||||||||||||||||||||| ||||    
T  51271730 gagaattgttgttcccaaattacataaggttgtgccacacgggtaa 51271685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 11688031 - 11687986
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  11688031 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 11687986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 117974 - 117928
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||||||||| ||||||  ||||||||||| |||||||||||    
T  117974 agagaattgatgttcccacatttgataaggttgtgtcacacgagtaa 117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 28362874 - 28362828
Alignment:
Q  327 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    ||||||||| | ||| |||||||||||||| ||||||||||||||||    
T  28362874 agagaattgctattcccacattacataaggctgtgccacacgagtaa 28362828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 11687393 - 11687438
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  11687393 gagaattgctgttcccacattatataaagttgtgccacacgagtaa 11687438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 29061230 - 29061275
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||| |||||||||||||| |||| |||||||||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaa 29061275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 16096 - 16050
Alignment:
Q  326 tagagaattgatgttctcacattacataaggttgtgccacacgagta 372  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||||    
T  16096 tagagaattgctgtttacactttacataaggttgtgccacacgagta 16050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 13346 - 13301
Alignment:
Q  328 gagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||||||| ||||  |||||||||||||| ||||||||||||||||    
T  13346 gagaattgctgtttccacattacataaggctgtgccacacgagtaa 13301  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 17957 - 18010
Alignment:
Q  320 aatatttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||| ||||||||||||||||| ||||||  |||| |||||| |||||||||||    
T  17957 aataattagagaattgatgttcccacatttgataaagttgtggcacacgagtaa 18010  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 54887 - 54834
Alignment:
Q  320 aatatttagagaattgatgttctcacattacataaggttgtgccacacgagtaa 373  Q
    |||| ||||||||||||||||| ||||||  |||| |||||| |||||||||||    
T  54887 aataattagagaattgatgttcccacatttgataaagttgtggcacacgagtaa 54834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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