View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5082_low_33 (Length: 280)
Name: NF5082_low_33
Description: NF5082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5082_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 13303444 - 13303698
Alignment:
| Q |
13 |
aaaatatacattatttgcggtacccgtaaagggttgagtcgcaggagagggacatccccacgcgctactatacttagaaatataaatgtccctctaaaca |
112 |
Q |
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| T |
13303444 |
aaaatatacattatttgcggtacccgtaaagggttgagtcgcaggagagggacatccccacgcgctactatacttagaaatataaatgtccctctaaaca |
13303543 |
T |
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| Q |
113 |
tagaatcattcaaaaatactcgatttggcgacattattaaaatacctatacaatgtgcaactagtcataaagtttggacatattgtctctgattccagtt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
13303544 |
tagaatcattcaaaaatactcgatttggcgacattattaaaatacctatacaatgtgcaactagtcataaagtttggacatattgtctctaattccagtt |
13303643 |
T |
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| Q |
213 |
ttctattggttaagcacatgtgagcagtgaacaaggtttcattcaccaataagat |
267 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
13303644 |
ttctattggttaagcacatgtgaacagtgaacaaggtttcattcaccaataagat |
13303698 |
T |
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