View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5085-Insertion-2 (Length: 1040)

Name: NF5085-Insertion-2
Description: NF5085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5085-Insertion-2
NF5085-Insertion-2
[»] chr5 (45 HSPs)
chr5 (667-984)||(13126020-13126338)
chr5 (45-214)||(231537-231706)
chr5 (203-393)||(13126385-13126590)
chr5 (45-216)||(14054449-14054622)
chr5 (46-216)||(32092120-32092290)
chr5 (46-211)||(11489790-11489955)
chr5 (95-216)||(14575670-14575791)
chr5 (94-216)||(35777579-35777701)
chr5 (95-216)||(14721141-14721262)
chr5 (94-216)||(972236-972358)
chr5 (46-199)||(15264081-15264234)
chr5 (96-216)||(41609175-41609295)
chr5 (392-466)||(18638728-18638802)
chr5 (92-212)||(36183814-36183937)
chr5 (394-466)||(3722965-3723037)
chr5 (391-462)||(33743219-33743290)
chr5 (115-216)||(43167052-43167153)
chr5 (60-216)||(7456545-7456700)
chr5 (392-466)||(30301320-30301394)
chr5 (393-466)||(27340979-27341052)
chr5 (393-466)||(34952293-34952366)
chr5 (393-465)||(20125501-20125573)
chr5 (395-466)||(39840593-39840664)
chr5 (392-465)||(16292137-16292210)
chr5 (393-466)||(42825224-42825297)
chr5 (577-625)||(13126345-13126393)
chr5 (126-177)||(664973-665024)
chr5 (394-465)||(36415951-36416022)
chr5 (395-465)||(32425063-32425133)
chr5 (391-465)||(33567125-33567199)
chr5 (394-466)||(8725307-8725377)
chr5 (391-465)||(285337-285411)
chr5 (393-466)||(4878162-4878235)
chr5 (400-440)||(21062918-21062958)
chr5 (391-455)||(33626524-33626588)
chr5 (394-464)||(3141608-3141678)
chr5 (394-465)||(39595385-39595456)
chr5 (395-465)||(125203-125273)
chr5 (45-83)||(36183761-36183799)
chr5 (428-466)||(42807418-42807456)
chr5 (391-464)||(2117526-2117599)
chr5 (393-466)||(12878845-12878918)
chr5 (392-457)||(20591361-20591426)
chr5 (392-465)||(20719902-20719975)
chr5 (393-465)||(40566104-40566177)
[»] chr6 (27 HSPs)
chr6 (46-212)||(22734744-22734910)
chr6 (92-216)||(5078233-5078357)
chr6 (46-216)||(31394228-31394397)
chr6 (46-216)||(32715643-32715812)
chr6 (48-216)||(33610896-33611066)
chr6 (393-466)||(19788964-19789037)
chr6 (92-177)||(3448481-3448566)
chr6 (95-212)||(26611557-26611674)
chr6 (391-466)||(7693425-7693500)
chr6 (119-216)||(10091599-10091696)
chr6 (48-216)||(2197824-2197992)
chr6 (393-466)||(30622134-30622207)
chr6 (169-216)||(3448298-3448345)
chr6 (392-466)||(14569277-14569351)
chr6 (393-466)||(28647323-28647396)
chr6 (391-455)||(2333496-2333560)
chr6 (389-466)||(23633209-23633286)
chr6 (389-465)||(1897797-1897873)
chr6 (393-462)||(3821518-3821587)
chr6 (392-457)||(27102219-27102284)
chr6 (392-457)||(27144041-27144106)
chr6 (394-466)||(6158669-6158741)
chr6 (400-455)||(9200231-9200286)
chr6 (399-466)||(26860509-26860576)
chr6 (391-430)||(28875239-28875278)
chr6 (36-82)||(3448582-3448628)
chr6 (391-464)||(32253892-32253966)
[»] chr8 (39 HSPs)
chr8 (46-216)||(24247473-24247644)
chr8 (46-216)||(16871762-16871931)
chr8 (48-216)||(7087669-7087837)
chr8 (46-216)||(33628402-33628573)
chr8 (46-216)||(43065120-43065293)
chr8 (92-216)||(31940499-31940623)
chr8 (92-216)||(36496342-36496466)
chr8 (95-216)||(45144983-45145104)
chr8 (94-216)||(9178986-9179108)
chr8 (92-212)||(13197585-13197704)
chr8 (95-216)||(2164840-2164962)
chr8 (46-216)||(3642715-3642885)
chr8 (391-465)||(27631058-27631132)
chr8 (389-466)||(34996244-34996321)
chr8 (104-216)||(12980114-12980226)
chr8 (94-216)||(4471640-4471762)
chr8 (46-216)||(19725085-19725255)
chr8 (391-466)||(11155768-11155843)
chr8 (92-216)||(25698937-25699061)
chr8 (391-464)||(29910098-29910171)
chr8 (96-216)||(32719149-32719270)
chr8 (393-466)||(41304870-41304943)
chr8 (94-177)||(36035605-36035688)
chr8 (391-465)||(23258143-23258217)
chr8 (392-465)||(42026483-42026556)
chr8 (391-466)||(35594654-35594723)
chr8 (394-465)||(40719533-40719604)
chr8 (400-466)||(323975-324041)
chr8 (394-464)||(8074614-8074684)
chr8 (405-466)||(5642290-5642351)
chr8 (405-466)||(5644231-5644292)
chr8 (392-461)||(40413250-40413319)
chr8 (391-447)||(10653669-10653725)
chr8 (393-465)||(39153572-39153644)
chr8 (394-466)||(41005874-41005946)
chr8 (394-457)||(9550312-9550375)
chr8 (393-464)||(21273598-21273669)
chr8 (392-464)||(30925541-30925613)
chr8 (391-464)||(31806411-31806484)
[»] chr1 (53 HSPs)
chr1 (47-216)||(22667460-22667629)
chr1 (46-216)||(28712094-28712264)
chr1 (46-216)||(33196464-33196634)
chr1 (45-216)||(33486126-33486288)
chr1 (99-212)||(41903188-41903301)
chr1 (95-216)||(31210707-31210828)
chr1 (46-176)||(41085542-41085672)
chr1 (46-176)||(41090310-41090440)
chr1 (95-216)||(36672017-36672138)
chr1 (119-216)||(46153428-46153525)
chr1 (126-216)||(46152374-46152464)
chr1 (46-216)||(12979622-12979793)
chr1 (36-216)||(42647427-42647606)
chr1 (119-216)||(5800027-5800124)
chr1 (101-216)||(6079789-6079904)
chr1 (94-216)||(39628025-39628147)
chr1 (46-216)||(11444466-11444637)
chr1 (392-466)||(33669710-33669784)
chr1 (94-212)||(51401985-51402103)
chr1 (46-216)||(26921871-26922043)
chr1 (392-466)||(30530286-30530360)
chr1 (48-216)||(45427321-45427493)
chr1 (393-466)||(8464401-8464474)
chr1 (391-466)||(4511663-4511738)
chr1 (391-466)||(52417641-52417716)
chr1 (392-466)||(33422106-33422180)
chr1 (392-466)||(44112564-44112638)
chr1 (94-213)||(48354909-48355032)
chr1 (115-216)||(43025262-43025363)
chr1 (394-466)||(34002209-34002281)
chr1 (391-466)||(44641789-44641864)
chr1 (391-466)||(50017309-50017384)
chr1 (393-466)||(50884658-50884731)
chr1 (394-455)||(51250180-51250241)
chr1 (391-466)||(49596351-49596426)
chr1 (395-466)||(52369001-52369072)
chr1 (394-440)||(21154359-21154405)
chr1 (392-466)||(24775085-24775159)
chr1 (397-455)||(52078542-52078600)
chr1 (392-465)||(11570250-11570323)
chr1 (392-465)||(49589859-49589932)
chr1 (392-464)||(42829195-42829267)
chr1 (48-122)||(33198354-33198429)
chr1 (392-466)||(45470726-45470800)
chr1 (391-452)||(5315335-5315396)
chr1 (394-465)||(26547345-26547417)
chr1 (398-466)||(15059734-15059802)
chr1 (391-447)||(24611973-24612029)
chr1 (402-466)||(40139223-40139287)
chr1 (399-466)||(5975647-5975714)
chr1 (391-457)||(10426852-10426918)
chr1 (391-465)||(22389412-22389485)
chr1 (391-440)||(34395805-34395855)
[»] chr7 (44 HSPs)
chr7 (49-215)||(27275818-27275985)
chr7 (46-216)||(39925994-39926165)
chr7 (46-216)||(46880065-46880234)
chr7 (92-216)||(968696-968820)
chr7 (95-216)||(38034920-38035041)
chr7 (124-216)||(31603387-31603479)
chr7 (95-216)||(24189247-24189368)
chr7 (46-214)||(37118532-37118707)
chr7 (46-216)||(30819490-30819661)
chr7 (94-216)||(45704699-45704823)
chr7 (92-212)||(20883710-20883830)
chr7 (45-216)||(428035-428201)
chr7 (92-199)||(37002334-37002440)
chr7 (45-216)||(24202902-24203078)
chr7 (48-177)||(8294291-8294419)
chr7 (393-466)||(27070557-27070630)
chr7 (393-466)||(27207683-27207756)
chr7 (394-466)||(30391256-30391328)
chr7 (393-466)||(17500807-17500880)
chr7 (393-466)||(17552334-17552407)
chr7 (95-216)||(29982253-29982374)
chr7 (395-466)||(5724148-5724219)
chr7 (392-461)||(36186781-36186850)
chr7 (393-465)||(21153163-21153235)
chr7 (394-466)||(49089053-49089125)
chr7 (391-465)||(31436528-31436601)
chr7 (394-466)||(47644819-47644891)
chr7 (95-174)||(24009083-24009162)
chr7 (392-465)||(36920896-36920969)
chr7 (394-465)||(12141995-12142066)
chr7 (96-216)||(19503315-19503436)
chr7 (96-216)||(45430208-45430329)
chr7 (392-461)||(45981304-45981373)
chr7 (544-580)||(27070707-27070743)
chr7 (544-580)||(27207570-27207606)
chr7 (394-465)||(5978690-5978761)
chr7 (391-464)||(7807168-7807240)
chr7 (96-216)||(15877162-15877284)
chr7 (391-466)||(24267533-24267608)
chr7 (96-216)||(28501535-28501657)
chr7 (94-177)||(29273077-29273160)
chr7 (394-465)||(33212137-33212208)
chr7 (391-465)||(46651783-46651857)
chr7 (394-455)||(18067814-18067875)
[»] chr4 (64 HSPs)
chr4 (47-216)||(52759985-52760154)
chr4 (46-216)||(23390538-23390710)
chr4 (46-216)||(30839439-30839611)
chr4 (44-214)||(20927477-20927649)
chr4 (48-216)||(28013201-28013371)
chr4 (46-212)||(52104609-52104775)
chr4 (47-216)||(54851080-54851250)
chr4 (46-216)||(25814577-25814746)
chr4 (92-216)||(46548447-46548571)
chr4 (94-212)||(48254144-48254262)
chr4 (45-216)||(40319034-40319209)
chr4 (95-216)||(4540756-4540877)
chr4 (67-216)||(30951319-30951468)
chr4 (46-216)||(50716270-50716441)
chr4 (46-216)||(4150324-4150485)
chr4 (94-212)||(39512744-39512862)
chr4 (95-216)||(17616604-17616725)
chr4 (95-216)||(45953740-45953861)
chr4 (45-216)||(16917257-16917428)
chr4 (95-216)||(1182678-1182799)
chr4 (96-216)||(27735115-27735235)
chr4 (94-216)||(36187980-36188103)
chr4 (46-216)||(22413599-22413771)
chr4 (95-216)||(24346925-24347046)
chr4 (92-216)||(10332720-10332844)
chr4 (394-466)||(45274373-45274445)
chr4 (46-216)||(49144140-49144309)
chr4 (95-216)||(34792077-34792199)
chr4 (397-466)||(10096634-10096703)
chr4 (385-466)||(34113997-34114078)
chr4 (393-465)||(35332815-35332887)
chr4 (96-216)||(34936746-34936867)
chr4 (398-466)||(42516744-42516812)
chr4 (92-216)||(53451892-53452016)
chr4 (391-457)||(4489685-4489751)
chr4 (393-466)||(11012235-11012308)
chr4 (397-466)||(17363340-17363409)
chr4 (393-438)||(41154166-41154211)
chr4 (391-456)||(42882575-42882640)
chr4 (397-457)||(25139848-25139908)
chr4 (392-466)||(1688315-1688389)
chr4 (393-450)||(4511938-4511995)
chr4 (393-466)||(4514153-4514226)
chr4 (391-464)||(29406923-29406996)
chr4 (396-465)||(39880921-39880990)
chr4 (394-465)||(40335888-40335956)
chr4 (391-464)||(42915105-42915178)
chr4 (394-455)||(50159055-50159116)
chr4 (96-216)||(56272666-56272789)
chr4 (394-466)||(29525968-29526040)
chr4 (393-465)||(31275257-31275329)
chr4 (393-465)||(53356965-53357037)
chr4 (394-465)||(5234360-5234431)
chr4 (392-465)||(4896387-4896460)
chr4 (393-455)||(8906352-8906414)
chr4 (394-439)||(19720529-19720575)
chr4 (392-438)||(23444719-23444765)
chr4 (400-466)||(39067850-39067916)
chr4 (395-465)||(51540737-51540807)
chr4 (46-79)||(4540893-4540926)
chr4 (544-581)||(10096781-10096818)
chr4 (392-457)||(11063976-11064041)
chr4 (544-577)||(17363229-17363262)
chr4 (392-464)||(31240760-31240833)
[»] chr3 (46 HSPs)
chr3 (92-216)||(542450-542574)
chr3 (46-216)||(47600145-47600315)
chr3 (46-216)||(54830860-54831033)
chr3 (94-212)||(25558438-25558556)
chr3 (46-216)||(40283955-40284123)
chr3 (93-216)||(47243770-47243893)
chr3 (94-213)||(8324474-8324593)
chr3 (105-216)||(45726884-45726995)
chr3 (94-216)||(54910834-54910957)
chr3 (99-216)||(43744422-43744538)
chr3 (48-216)||(41574931-41575101)
chr3 (138-216)||(13451616-13451694)
chr3 (389-466)||(22153974-22154051)
chr3 (391-462)||(11233917-11233988)
chr3 (48-154)||(52458199-52458305)
chr3 (393-466)||(18713713-18713786)
chr3 (92-216)||(43388340-43388464)
chr3 (46-199)||(46948840-46948993)
chr3 (393-466)||(622347-622420)
chr3 (95-216)||(32621428-32621549)
chr3 (395-466)||(26668950-26669021)
chr3 (391-462)||(42424345-42424416)
chr3 (393-465)||(40159714-40159786)
chr3 (394-462)||(43176309-43176377)
chr3 (394-466)||(44334690-44334762)
chr3 (392-462)||(35425559-35425629)
chr3 (392-465)||(46473239-46473312)
chr3 (395-447)||(47509037-47509089)
chr3 (394-465)||(28300535-28300606)
chr3 (392-455)||(42104537-42104600)
chr3 (391-465)||(51032512-51032586)
chr3 (392-465)||(20380776-20380849)
chr3 (393-465)||(7231894-7231966)
chr3 (390-430)||(28300420-28300460)
chr3 (402-466)||(37323777-37323841)
chr3 (394-465)||(11335191-11335262)
chr3 (96-179)||(19608382-19608465)
chr3 (392-455)||(23920418-23920481)
chr3 (96-216)||(52179149-52179271)
chr3 (391-465)||(11173561-11173635)
chr3 (394-464)||(29706015-29706085)
chr3 (395-465)||(41369690-41369760)
chr3 (391-464)||(55344181-55344255)
chr3 (393-430)||(3484891-3484928)
chr3 (392-461)||(4208115-4208184)
chr3 (391-464)||(50745472-50745545)
[»] chr2 (35 HSPs)
chr2 (47-216)||(36053984-36054155)
chr2 (36-216)||(41516029-41516211)
chr2 (46-216)||(29943595-29943766)
chr2 (92-216)||(6279732-6279858)
chr2 (46-212)||(2639954-2640125)
chr2 (94-216)||(39307098-39307220)
chr2 (95-216)||(325542-325663)
chr2 (95-216)||(36430810-36430931)
chr2 (95-216)||(44544133-44544254)
chr2 (95-216)||(3911315-3911435)
chr2 (95-216)||(13118904-13119025)
chr2 (119-216)||(36023699-36023796)
chr2 (94-216)||(13507451-13507571)
chr2 (92-216)||(15354538-15354664)
chr2 (393-466)||(42665700-42665773)
chr2 (393-466)||(546273-546346)
chr2 (126-216)||(5155889-5155981)
chr2 (392-464)||(7497878-7497950)
chr2 (394-466)||(10389329-10389401)
chr2 (394-466)||(11442782-11442854)
chr2 (393-452)||(42554898-42554957)
chr2 (394-463)||(2308213-2308282)
chr2 (96-216)||(22594826-22594947)
chr2 (394-464)||(35965694-35965764)
chr2 (391-464)||(13711173-13711246)
chr2 (392-465)||(42251807-42251880)
chr2 (393-465)||(4723677-4723749)
chr2 (393-464)||(19913896-19913968)
chr2 (395-466)||(6666130-6666201)
chr2 (394-465)||(36909732-36909803)
chr2 (391-465)||(3091852-3091926)
chr2 (395-465)||(36795841-36795911)
chr2 (392-462)||(38912488-38912558)
chr2 (544-578)||(42665851-42665885)
chr2 (391-464)||(36133086-36133159)
[»] scaffold0008 (1 HSPs)
scaffold0008 (95-216)||(263023-263144)
[»] scaffold0190 (1 HSPs)
scaffold0190 (95-216)||(5896-6017)
[»] scaffold0059 (1 HSPs)
scaffold0059 (95-216)||(70890-71011)
[»] scaffold0020 (1 HSPs)
scaffold0020 (392-466)||(156016-156090)
[»] scaffold0154 (1 HSPs)
scaffold0154 (397-465)||(4425-4493)
[»] scaffold0194 (1 HSPs)
scaffold0194 (397-466)||(29702-29771)
[»] scaffold0238 (1 HSPs)
scaffold0238 (391-466)||(16501-16576)
[»] scaffold0072 (1 HSPs)
scaffold0072 (392-466)||(14436-14510)
[»] scaffold0057 (1 HSPs)
scaffold0057 (400-466)||(21469-21535)
[»] scaffold0036 (1 HSPs)
scaffold0036 (392-464)||(18116-18187)
[»] scaffold0111 (1 HSPs)
scaffold0111 (394-466)||(36757-36829)
[»] scaffold0024 (1 HSPs)
scaffold0024 (428-466)||(60577-60615)


Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 667 - 984
Target Start/End: Complemental strand, 13126338 - 13126020
Alignment:
Q  667 attagttcaattgtaactagtgtggctaaatgagagattaactcaaaagcataaacagtagttttcagactcattatgattatcattcatagcacctgtt 766  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13126338 attagttcaattgtaactagtgtggccaaatgagagattaactcaaaagcataaacagtagttttcagactcattatgattatcattcatagcacctgtt 13126239  T
Q  767 aacagcgacaacttatttaatttccctgtctcctcagaccaatataaaactaacggccccgatttctccgtcagaaacaatcacaaccgtcaaactccac 866  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13126238 aacagcgacaacttatttaatttccctgtctcctcagaccaatattaaactaacggccccgatttctccgtcagaaacaatcacaaccgtcaaactccac 13126139  T
Q  867 tcaaaccttgtcccacttaatcattatcaaaactaact-aacggcactactttccatcttatttcccattttacccttactcgtt-caaataacttttgg 964  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  13126138 tcaaaccttgtcccacttaatcaatatc-aaactaactaaacgacactactttccatattatttcccattttacccttactcgttccaaataacttttgg 13126040  T
Q  965 tttttccgtcttaacacttc 984  Q
    ||||||||||||||||||||    
T  13126039 tttttccgtcttaacacttc 13126020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 231537 - 231706
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    ||||||| ||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||| |||| ||||||||||||| ||||| |    
T  231537 tggtacatccatatattaaattaatagtttaatgagttattttttttagaaaaaatatattttctattggttataattataataattatattttatttct 231636  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattat 214  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  231637 caaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattat 231706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 203 - 393
Target Start/End: Complemental strand, 13126590 - 13126385
Alignment:
Q  203 aatattgattatttatgacatgtttgattgtttttaagtgggagtgattttgagtttttgactcaagaattacttctacttgaagttagga--------- 293  Q
    |||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||| ||             
T  13126590 aatattaattatttatgacatgtttgattgtttttaagtcgaaatgattttgagtttttgactcaagaattacttctacttcaagttaagatttatagtt 13126491  T
Q  294 ------atataatttgatttttatatacaaatttaaagttaaatcacttattatatcaatgtagttagatataaatcaatttaccttcaactcacctttc 387  Q
          ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  13126490 tttatcatataatttgatttttatacacaaatttaaagttaaatcactttttatattaatatagttaaatataaatcaatttaccttcaactcacctttc 13126391  T
Q  388 atcaaa 393  Q
    ||||||    
T  13126390 atcaaa 13126385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 14054449 - 14054622
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    ||||| |||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |    
T  14054449 tggtatacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttct 14054548  T
Q  145 caaaagtgtcggcaaatcaaaattcaaattt--ttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||  |||  || | ||||||||||||||||||||||||||||||||||||    
T  14054549 caaaagtgtcggcaaatcaaaattcattttttatttttatttttaatacccataatagtgaatattgattattt 14054622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 32092120 - 32092290
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||| ||| ||||||||        ||||||| |||||||||||||| |||||||| ||||||||||||| ||||| ||    
T  32092120 ggtacacccatatgttaaatgaataatttgatgagttattttttttagaaaaattatattttctattgattacaattataataattatattttatttctc 32092219  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  32092220 aaaagtgtcggcaaattcaaattcaaatttttttaatttttaatacccttaatagtgaatattgattattt 32092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 11489955 - 11489790
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||| ||||| |||||| |||||||||||||||||        |||||||||||||||| ||||||||||||   ||||||||||||| | ||| ||    
T  11489955 ggtacactcatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttttattggttacaacaataataattatattttttttctc 11489856  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgat 211  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11489855 aaaagtgttggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgat 11489790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 14575791 - 14575670
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  14575791 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 14575692  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  14575691 taatagtgaatattgattattt 14575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 35777701 - 35777579
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||| |    
T  35777701 aaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaatttaaatttttttaatttttattactc 35777602  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  35777601 ataatagtgaatattgattattt 35777579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 14721141 - 14721262
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||| | ||| ||    
T  14721141 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaattttttttaattttcattactca 14721240  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  14721241 taatagtgaatattgattattt 14721262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 972236 - 972358
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| | |||||| |||| |||||||||||||||||||||||  ||||||||||||||| ||||||||| ||| |    
T  972236 aaaaaaaatattttctatcatttataattattataattttattttatttttcaaaagtgtcggcaaagtaaaattcaaatttttttaatttttattactc 972335  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  972336 ataatagtgaatattgattattt 972358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 15264081 - 15264234
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| ||||||||||| |||||||||||| ||||          |||||| ||||||||||| |||||||||| ||||||||||||| ||||| ||    
T  15264081 ggtacacctatatattaaattaatagtttaatgtgttattttttttttaaaaaaaatattttctatcggttacaattataataattatattttatttctc 15264180  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttct-aatttttaatacccataata 199  Q
    ||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||||    
T  15264181 aaaagtgtccgcaaatcaaaattc-aatttttctaaatttttattactcataata 15264234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 41609175 - 41609295
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccat 195  Q
    |||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| ||| | |    
T  41609175 aaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcgataaagcaaaattcaaatttttttaatttttattactcgt 41609274  T
Q  196 aatagtgaatattgattattt 216  Q
    |||| ||||||||||||||||    
T  41609275 aataatgaatattgattattt 41609295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 18638728 - 18638802
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || | ||||||||    
T  18638728 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaacttttattttctcttttcttattggtcc 18638802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 36183814 - 36183937
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaat---ttttctaatttttaa 188  Q
    ||||||||||||||||||||  |||||||||  ||||  | |||| ||||| ||||||||||||| |||||||||||||| |   |||| |||||||||     
T  36183814 agaaaaaatatattttctatcagttacaattacaatagatttattttatttctcaaaagtgtcggtaaatcaaaattcaactttcttttttaatttttat 36183913  T
Q  189 tacccataatagtgaatattgatt 212  Q
    ||| ||||||||||||||||||||    
T  36183914 tactcataatagtgaatattgatt 36183937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 3722965 - 3723037
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| ||||||||    
T  3722965 gagtaatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtcc 3723037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 33743219 - 33743290
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| ||||||| ||||||    
T  33743219 aaagagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttgctctcttctcattg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 43167052 - 43167153
Alignment:
Q  115 ttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattat 214  Q
    |||||||| |||||| |||||| |||||||||||||||||||  || ||||||||||||||||  | |||||| ||  |||||||||||||||| |||||    
T  43167052 ttacaattttaataactatattttatttttcaaaagtgtcggggaagcaaaattcaaatttttgaattttttattattcataatagtgaatatttattat 43167151  T
Q  215 tt 216  Q
    ||    
T  43167152 tt 43167153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 7456700 - 7456545
Alignment:
Q  60 ttaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaa 159  Q
    |||||| |||||||||||||||||        |||||||||||||||||||||  |||||||| |||||| | |||| ||||| |||||||||||||| |    
T  7456700 ttaaattaatagtttaatgagttatattttttagaaaaaatatattttctattatttacaattataataactgtattttatttctcaaaagtgtcggcga 7456601  T
Q  160 atcaaaattcaaatttttctaatt-tttaatacccataatagtgaatattgattattt 216  Q
    | |||| ||||| ||||   |||| |||| ||| ||||||| || |||||||||||||    
T  7456600 agcaaatttcaactttt--aaattgtttattactcataataatggatattgattattt 7456545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 30301394 - 30301320
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| | |||| ||||||| ||||| ||||    
T  30301394 aagagtagtgatatatgtacaaccatatgtaacaactttgatgacaactttcatttcctctcttctcatttgtcc 30301320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 27341052 - 27340979
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||| | |||| ||||||||| ||||||||    
T  27341052 agagtagtgatatatgtacaatcatttggtacaattttgatgacaactttcatttgctctctttttattggtcc 27340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 34952293 - 34952366
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||  |||||| | |||||||||||||||| |||||||||||||| | ||||||||    
T  34952293 agagtagtgatatatgtacaattatttgggataactttgatgacaacttttattttctctcttcttattggtcc 34952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 20125573 - 20125501
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||| ||||||||| |||||| |||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  20125573 agagtggtgatatatatacaactatttgggacaactttgatgacaactttcattttctctcttctcattggtc 20125501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 39840593 - 39840664
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||| |||||  | |||||||||||||||| |||||||| ||||| ||||||||||    
T  39840593 agtagtgatatatgtacaactatttgtgataactttgatgacaacttttattttccctcttctcattggtcc 39840664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 16292137 - 16292210
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||||||||    |||||||||| ||||||| |||||||||| ||||| |||||||    
T  16292137 aagagtagtgatatatgtacaaccattgatgacaactttgaagacaactattattttctcgctttttattggtc 16292210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 42825297 - 42825224
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||  |||||||||||  |||| |||| |||||||| |||||||||||||| ||||||||||    
T  42825297 agagtagtgatatattgacaaccatttgtgacaattttgttgacaacttttattttctctcttctcattggtcc 42825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 625
Target Start/End: Complemental strand, 13126393 - 13126345
Alignment:
Q  577 ttcatcaaaatcaaattatcaaaaccaactcttttagaatcaattttta 625  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13126393 ttcatcaaaatcaaattataaaaaccaactcttttaaaatcaattttta 13126345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 665024 - 664973
Alignment:
Q  126 ataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattttt 177  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  665024 ataattatattttatttttcaaaagtgtcggcaaagcaaaattcaatttttt 664973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 36415951 - 36416022
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||  ||||| |||||||| ||||||||| |  ||||||||||||| |||||||    
T  36415951 gagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtc 36416022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 32425133 - 32425063
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||||| | ||||||| |||||| |||||||    
T  32425133 agtagtgacatatgtacaactatttggtacaactttcatgacaactttaattttctatcttttgattggtc 32425063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 33567125 - 33567199
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||| |||||||||||  ||||||||  |||||| |  | |||||||||||||||||||||    
T  33567125 aaagagtagtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtc 33567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 8725307 - 8725377
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||| | ||||||||| || | ||||||||    
T  8725307 gagtagtgatatat--acaaccatttgggacaactttgatgacaactttcattttctcttttcttattggtcc 8725377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 285411 - 285337
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||||  ||| | |||||||| ||| ||||| | ||||||| |||||| |||||||    
T  285411 aaagagtagtgatatatgtacaactctttagtacaactttcatgccaactttaattttctatcttttgattggtc 285337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 4878162 - 4878235
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||| ||||||| ||||||||||| |  ||||||||||||||||||| |||||| |||| |||  ||||||||    
T  4878162 agagttgtgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctatttctattggtcc 4878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 21062958 - 21062918
Alignment:
Q  400 tgatatatgtacaaccatttggaacaactttgatgacaact 440  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  21062958 tgatatatgtacaaccatttggtacaattttgatgacaact 21062918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 33626524 - 33626588
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    ||||||| ||||||| ||||||||||| |  ||||||||| ||||||||| |||||| |||||||    
T  33626524 aaagagttgtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctt 33626588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 3141678 - 3141608
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaacttt-gatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||| || ||||||||||   |||||||| |||||||||| || ||||||||||||||||||||    
T  3141678 gagtagtgatatttgaacaaccatttcatacaacttttgatgacaactttt-ttttctctcttttcattggt 3141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 39595456 - 39595385
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||| |||||| || |||||||||||  ||||||||  ||||||||  | |||||||||||||||||||||    
T  39595456 gagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 39595385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 125273 - 125203
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||| || |||||||||||  ||||||||   |||||||  | |||||||||||||||||||||    
T  125273 agtagtgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcattggtc 125203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 36183761 - 36183799
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagtta 83  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  36183761 tggtacacctatatattaaatgaatagtttaatgagtta 36183799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 428 - 466
Target Start/End: Complemental strand, 42807456 - 42807418
Alignment:
Q  428 tttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  42807456 tttgatgacaacttttattttctctctttttattggtcc 42807418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 2117526 - 2117599
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| |||||  ||||||||  ||||||||  | |||||||| |||||||||||    
T  2117526 aaagagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcattggt 2117599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 12878918 - 12878845
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||| ||||| |||||||||||||| | | ||||||||| | || | |||||| |||| |||||||||||||    
T  12878918 agagtaatgatacatgtacaaccatttagtataactttgatcataatttttatttactcttttttcattggtcc 12878845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 20591361 - 20591426
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    |||||| ||||||| ||||||||||| |  ||||||||| ||||||||| ||||||  ||||||||    
T  20591361 aagagttgtgatatttgtacaaccatatctaacaactttaatgacaacttttatttattctctttt 20591426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 20719902 - 20719975
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||| || ||| |||||||  ||||||||  ||||||||  | || ||||||||||||||||||    
T  20719902 aagagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtc 20719975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 40566104 - 40566177
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactctt-attttctctcttttcattggtc 465  Q
    ||||||||||||| || ||| |||||||  ||||||||  | |||||| || ||||||||||||||||||||||    
T  40566104 agagtagtgatatttgaacatccatttgagacaacttttttaacaactttttattttctctcttttcattggtc 40566177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 3e-60; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 22734744 - 22734910
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  22734744 ggtacacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctc 22734843  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgatt 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22734844 aaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgatt 22734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 5078233 - 5078357
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  5078233 agaaaaaatatattttctattgattacaattataataattatattttatttctcaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatac 5078332  T
Q  192 ccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||    
T  5078333 ccataatagtgaatattgattattt 5078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 31394228 - 31394397
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||| |||||| ||||||||||||||||||||||||        |||||| ||||||||| |||||||||||||| ||||||||||||| ||||| ||    
T  31394228 ggtacatccatatgttaaataaatagtttaatgagttatttatttcagaaaa-atatattttttattggttacaattataataattatattttatttctc 31394326  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||    
T  31394327 aaaagtgtcgacaaatcaaaattcaaaattttttaatttttaatattcataatagtgaatattgattattt 31394397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 32715643 - 32715812
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagt-tannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||| ||||||||||||| ||||||||||||| | ||        ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  32715643 ggtacatccatatattaaatgaatagtttaatgaatatatttttcttagaaaaaatatattttctattagttacaattataataattatattttattttt 32715742  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||  || ||||||||||||||||    
T  32715743 caaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatactcat--tattgaatattgattattt 32715812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 33611066 - 33610896
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||| | ||||||||| ||||||||||||| |||        | |||||||||||||||||||  ||| |||| ||||||||||||| ||||| ||||    
T  33611066 tacacctacatattaaattaatagtttaatgaattattttttagaaaaaaaatatattttctattaattataattataataattatattttatttctcaa 33610967  T
Q  148 aagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||| |||||||||||||||| || || | ||||||| ||| ||||  ||||||||||||||||||||    
T  33610966 aagtgtccgcaaatcaaaattcaatttatttttatttttattactcataatatagtgaatattgattattt 33610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 19788964 - 19789037
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  19788964 agagtagtgatatatgtacaaccatttgggacaactttgatgacaactctgattttctctcttctcattggtcc 19789037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 3448566 - 3448481
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattttt 177  Q
    ||||||||||||||| ||| ||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  3448566 agaaaaaatatatttcctactggttacaattataataatcatattttatttctcaaaagtgtcggcaaatcaaaattcaaaatttt 3448481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 26611557 - 26611674
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| |||||||||||||  |||| |||||||||| |||||| |||||||||||||||| | ||||||| ||| ||    
T  26611557 aaaaaaatattttctatcatttataattataataattatatttaatttctcaaaagtgttggcaaagcaaaattcaaatttttttgatttttattactca 26611656  T
Q  195 taatagtgaatattgatt 212  Q
    ||||||||||||||||||    
T  26611657 taatagtgaatattgatt 26611674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 7693500 - 7693425
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| | ||||||||    
T  7693500 aaagagtagtgatatatgtacaaccatttgggacaactttgatgacaatttttattttctctcttcttattggtcc 7693425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 10091599 - 10091696
Alignment:
Q  119 aattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||| |||||| |||||| ||||| ||||| ||||||| ||| |||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||    
T  10091599 aattataataactatattttatttctcaaatgtgtcggtaaagcaaaattcaaatttttttaatttttgttactcataatagtgaatattggttattt 10091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 2197824 - 2197992
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaata-tattttctattggttacaattgtaataattatattatatttttca 146  Q
    ||||||||||| |||||| |||||||||||||||||        |||||||| | ||||||||||   |||||||  |||||| |||||| ||||| |||    
T  2197824 tacacccatat-ttaaattaatagtttaatgagttactttttttagaaaaaaaaatattttctatcatttacaatgataataactatattttatttctca 2197922  T
Q  147 aaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||  || ||||||| ||||||||  |  ||||| ||| |||||||||||||||| |||||||    
T  2197923 aaagtgtcggtgaagcaaaatttaaatttttgaatcttttattactcataatagtgaatatttattattt 2197992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 30622207 - 30622134
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| | ||||| |||||| | ||||||||    
T  30622207 agagtagtgatatatgtacaactatttgggacaactttgatgacaactttcattttttctcttcttattggtcc 30622134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 3448345 - 3448298
Alignment:
Q  169 caaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3448345 caaatttttttaatttttaatacccataatagtgaatattgattattt 3448298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 14569351 - 14569277
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||| |||||||||||||  | ||||||||||| || | ||||| |||||||||||||||||||    
T  14569351 aagagtagtgatatacgtacaaccatttgagataactttgatgataaattttattatctctcttttcattggtcc 14569277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 28647323 - 28647396
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||| | ||||  |||||| ||||||||||    
T  28647323 agagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttctcattggtcc 28647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 2333560 - 2333496
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||||| |||||||||||||| |||||| ||||| ||||||||||| | ||||||||||||||    
T  2333560 aaagagtactgatatatgtacaatcatttgaaacaattttgatgacaatttttattttctctctt 2333496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 23633209 - 23633286
Alignment:
Q  389 tcaaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||| |||||||||  ||||||||||   |||| |||| |||||||| ||||||||||| |||||||||||||    
T  23633209 tcaaagagtggtgatatattgacaaccatttctgacaattttgttgacaacttttattttctcttttttcattggtcc 23633286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 1897873 - 1897797
Alignment:
Q  389 tcaaagagtagtgatatatgtacaaccatttggaacaactttgatgacaac-tcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||| || ||| | ||||| |||||||||  ||||||| |||| |||||||||||||||||||||    
T  1897873 tcaaagagtagtgatatttgaacatctatttgaaacaacttttgtgacaacctctt-ttttctctcttttcattggtc 1897797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 3821587 - 3821518
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    ||||||||||||||||||||  ||||||| | |||||||||||||| | ||||||  |||||| ||||||    
T  3821587 agagtagtgatatatgtacattcatttggtataactttgatgacaatttttatttgttctcttctcattg 3821518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 27102284 - 27102219
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    ||||||||| |||| ||||||||  ||||| |||||||| ||||||||| | ||||||||||||||    
T  27102284 aagagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttt 27102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 27144106 - 27144041
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    ||||||||| |||| ||||||||  ||||| |||||||| ||||||||| | ||||||||||||||    
T  27144106 aagagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttt 27144041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 6158669 - 6158741
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||| ||||||| ||||||||||| |  ||||||||| ||||||||| |||||| ||||||||  ||||||||    
T  6158669 gagttgtgatatgtgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtcc 6158741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 455
Target Start/End: Complemental strand, 9200286 - 9200231
Alignment:
Q  400 tgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||| ||||||||||| |  ||||||||||||||||||| |||||| |||||||    
T  9200286 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctctt 9200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 26860509 - 26860576
Alignment:
Q  399 gtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||| ||||||||||| |  ||||||||| ||||||||| |||||| ||||||||  ||||||||    
T  26860509 gtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtcc 26860576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 28875278 - 28875239
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaacttt 430  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  28875278 aaagagtaatgatatatgtacaaccatttgggacaacttt 28875239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 3448628 - 3448582
Alignment:
Q  36 caatttttatggtacacccatatattaaataaatagtttaatgagtt 82  Q
    |||||| |||||||||||||||| |||||| |||| |||||||||||    
T  3448628 caatttctatggtacacccatatgttaaatgaatactttaatgagtt 3448582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 32253966 - 32253892
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattt-tctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| |||||| ||||||||  |||||| | || ||| |||||||||||||||||    
T  32253966 aaagagtagtgatatttgaacaactatttggtacaacttttgtgacaatttttttttctctctcttttcattggt 32253892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 2e-58; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 24247473 - 24247644
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnn-agaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    ||||||||||||| |||||| |||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |    
T  24247473 ggtacacccatatgttaaatgaatagtttaatgagttatttttttttagaaaaaatatattttctattggttacaattataataattatattttatttct 24247572  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24247573 caaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattattt 24247644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 16871931 - 16871762
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||    
T  16871931 ggtacacccatatgttaaatgaatagtttaatgagttattttttt-agaaaaaatatattttctattggttccaattataataattatattttatttctc 16871833  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16871832 aaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattattt 16871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 7087669 - 7087837
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||| |||| |||||| |||||||||||||||||        ||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  7087669 tacacctatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattagttacaattataataattatattttatttctcaa 7087768  T
Q  148 aagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  7087769 aagtgtcggcaaatcaaaattcaaattttttaaatttttaatacccataatagtgaatattgattattt 7087837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 33628402 - 33628573
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  33628402 ggtacacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctc 33628501  T
Q  146 aaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  33628502 aaaagtgtcggcaaatcaaaatttaatttttttttaatttttaatacccataatagtgaatattgattattt 33628573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 43065293 - 43065120
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnn--agaaaaaatatattttctattggttacaattgtaataattatattatatttt 143  Q
    ||||||||||||| |||||| |||||||||||||||||          ||||||||||||||||||||||||||||||| ||||||||||||| |||||     
T  43065293 ggtacacccatatgttaaatgaatagtttaatgagttattttttttttagaaaaaatatattttctattggttacaattataataattatattttatttc 43065194  T
Q  144 tcaaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||    
T  43065193 tcaaaagtgtcggcaaatcaaaattcaatttttttttaatttttaatacgcataatagtgaatattgattattt 43065120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 31940499 - 31940623
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31940499 agaaaaaatatattttctattagttacaattataataattatattttatttttcaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatac 31940598  T
Q  192 ccataatagtgaatattgattattt 216  Q
     |||| || ||||||||||||||||    
T  31940599 tcatattattgaatattgattattt 31940623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 36496466 - 36496342
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36496466 agaaaaaatatattttctattagttacaattataataattatattttatttttcaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatac 36496367  T
Q  192 ccataatagtgaatattgattattt 216  Q
     |||| || ||||||||||||||||    
T  36496366 tcatattattgaatattgattattt 36496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 45145104 - 45144983
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  45145104 aaaaatatattttttattggttacaattataataattatattttatttctcaaaagtgtcggcaaattaaaattcaattttttttaatttttaataccca 45145005  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||| ||||    
T  45145004 taatagtgaatattgataattt 45144983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 9179108 - 9178986
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |    
T  9179108 aaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactc 9179009  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  9179008 ataatagtgaatattgattattt 9178986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 13197585 - 13197704
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    ||||||||||||||||||||   |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||  |||||||| |||    
T  13197585 agaaaaaatatattttctataaattacaattataataattatattttatttctcaaaagtgtcggcaaatcaaaattcaacttttt-aaatttttattac 13197683  T
Q  192 ccataatagtgaatattgatt 212  Q
     ||||||||||||||||||||    
T  13197684 tcataatagtgaatattgatt 13197704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 2164840 - 2164962
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaataccc 193  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||  ||||| ||||||||| ||| |    
T  2164840 aaaaaaatattttctatcatttataattataataattatattttattttttaaaagtgtcggcaaagcaaaattcaatttttttttaatttttattactc 2164939  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  2164940 ataatagtgaatattgattattt 2164962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 3642715 - 3642885
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| |||||||||||||||||        | ||||||||||||||||||  |||| |||| ||||||||||||| ||||| ||    
T  3642715 ggtacacctacatattaaattaatagtttaatgagttactttttaaa-aaaaaatatattttctatcagttataattataataattatattttatttctc 3642813  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| ||| |||||||||| ||||||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  3642814 aaaagtgtccgcagatcaaaattc-aattttttttatttttattactcataatatagtgaatattgattattt 3642885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 27631132 - 27631058
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||    
T  27631132 aaagagtagtgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggtc 27631058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 34996244 - 34996321
Alignment:
Q  389 tcaaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||| ||||||||||||||||||    
T  34996244 tcaaagagtagtgatatatgtacaactatttggtacaactttgatgacaactttcatttgctctcttttcattggtcc 34996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 12980114 - 12980226
Alignment:
Q  104 ttttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtga 203  Q
    |||||||||  ||| |||| |||||| |||||| ||||| | ||||||||||||||| |||||||| | ||||| ||||||||| ||| |||||||||||    
T  12980114 ttttctattatttataattataataactatattttatttcttaaaagtgtcggcaaagcaaaattctagtttttttaatttttattactcataatagtga 12980213  T
Q  204 atattgattattt 216  Q
    |||||||||||||    
T  12980214 atattgattattt 12980226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 4471762 - 4471640
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| ||||||||||||  |||||||| |||||| |||||| ||||| |||||||||||| | || |||||||||| |||||  | |||||| ||| |    
T  4471762 aaaaaaaatattttctattatttacaattataataactatattttatttatcaaaagtgtcgtcgaagcaaaattcaattttttaaattttttattactc 4471663  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||| ||||||||||||||||    
T  4471662 ataataatgaatattgattattt 4471640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 19725085 - 19725255
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| ||||||||||| |||||||||||||||||        | |||| |||||   |||||  |||| |||| ||||||||||||| |||||  |    
T  19725085 ggtacacctatatattaaattaatagtttaatgagttattttttaaa-aaaatatataccctctatcagttataattataataattatattttatttcac 19725183  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| |||||||||||||| |||||||  |||||||| ||| ||||  ||||||||||||||||||||    
T  19725184 aaaagtgtccgcaaatcaaaattc-aattttttaaatttttattactcataatatagtgaatattgattattt 19725255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 11155768 - 11155843
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||| ||| |||||||| ||||    
T  11155768 aaagagtagtgatatatgtagaaccatttgtgacaactttgatgacaacttttattttttcttttttcattagtcc 11155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 25698937 - 25699061
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||| ||||||| ||||  ||||| || |||||| |||||| ||||| |||||||||| | | || ||||||| || |||||  | |||||| |||    
T  25698937 agaaaaaaaatattttgtattatttacacttataataactatattttatttatcaaaagtgttgtcgaagcaaaatttaattttttaaattttttattac 25699036  T
Q  192 ccataatagtgaatattgattattt 216  Q
     ||||||||||||||||||||||||    
T  25699037 tcataatagtgaatattgattattt 25699061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 29910098 - 29910171
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||||||  ||||||||||   ||||||||| |||||||| |||||||||||||| ||||||||    
T  29910098 aaagagtagtgatatattgacaaccatttttgacaactttgttgacaacttttattttctctcttctcattggt 29910171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 32719270 - 32719149
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaa-tttttaataccca 194  Q
    |||| |||||||||||   |||||||| ||||||| ||||| |||||||||||| ||| ||| || || ||||||| ||||| ||| |||||| |||  |    
T  32719270 aaaaaatattttctatcatttacaattataataataatattttatttttcaaaaatgttggcgaagcagaattcaactttttttaattttttattactta 32719171  T
Q  195 taatagtgaatattgattattt 216  Q
    |||||||||||||| |||||||    
T  32719170 taatagtgaatatttattattt 32719149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 41304870 - 41304943
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||  ||||| |||||  ||||||||| |||||||| |||||||||||||| ||||||||||    
T  41304870 agagtagtgatatattgacaacaatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 41304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 36035605 - 36035688
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattttt 177  Q
    |||||| ||||||||||||  |||||||| |||||| |||||| ||||| |||||||||| | |||| |||||||||| |||||    
T  36035605 aaaaaaaatattttctattatttacaattataataactatattttatttatcaaaagtgttgtcaaagcaaaattcaatttttt 36035688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 23258217 - 23258143
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||| || ||||||||||| ||||| |||  ||||||||  | |||||||||||||||||||||    
T  23258217 aaagagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcattggtc 23258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 42026556 - 42026483
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||| ||||||||| || |||| |  |||| ||||||||||||| |||||||||||||||| |||||||    
T  42026556 aagagtagtaatatatgtataatcattggtgacaattttgatgacaactattattttctctctttttattggtc 42026483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 35594723 - 35594654
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||       ||||||||||||||||| | |||||||||||||| ||||||||    
T  35594723 aaagagtagtgatatatgtacaaccac------caactttgatgacaactttcattttctctctttttattggtcc 35594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 40719533 - 40719604
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||  ||| | |||||||| ||||||||| |  ||||||||||||| |||||||    
T  40719533 gagtagtgatatatgtacaactctttcgtacaacttttatgacaactttggttttctctcttttgattggtc 40719604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 323975 - 324041
Alignment:
Q  400 tgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||| ||||||||||| |  ||||||||||||||||||| |||||| ||||||| | ||||||||    
T  323975 tgatatctgtacaaccatatctaacaactttgatgacaacttttatttactctcttcttattggtcc 324041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 8074614 - 8074684
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||||||||| ||| |   |||||||||||||||||| | |||||||||||| | ||||||    
T  8074614 gagtagtgatatatgtacaatcatatttgacaactttgatgacaactttcattttctctcttcttattggt 8074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 5642290 - 5642351
Alignment:
Q  405 tatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||| |||||  | |||||||||||||||| |||||||||||||| | ||||||||    
T  5642290 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtcc 5642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 5644231 - 5644292
Alignment:
Q  405 tatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||| |||||  | |||||||||||||||| |||||||||||||| | ||||||||    
T  5644231 tatgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtcc 5644292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 40413250 - 40413319
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcatt 461  Q
    |||||||||||||| || |||||||||||  |||||||| |||| ||||  | |||||||||||||||||    
T  40413250 aagagtagtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcatt 40413319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 10653669 - 10653725
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattt 447  Q
    ||||||| ||||||| ||||||||||| |  ||||||||||||||||||| ||||||    
T  10653669 aaagagttgtgatatttgtacaaccatatctaacaactttgatgacaacttttattt 10653725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 39153572 - 39153644
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||  ||| | | |||||| |||| |||| | |||||||||||||| |||||||    
T  39153572 agagtagtgatatatgtacaactctttagtataactttcatgataactttgattttctctcttttgattggtc 39153644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 41005946 - 41005874
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||| ||||  |||||| | || || ||||| |||| |||||||||||||| ||||||||||    
T  41005946 gagtagtgatatatgcacaattatttgggataatttagatgataacttttattttctctcttctcattggtcc 41005874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 9550312 - 9550375
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||| | ||||||| ||||||    
T  9550312 gagtagtgatatatgtacaactctttgatacaactttcatgacaactttaattttctatctttt 9550375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 21273598 - 21273669
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||| || ||||| ||||   ||||||||  |||||||| || ||||||||||||||||||||    
T  21273598 agagtagtgatatttgaacaactatttcatacaacttttgtgacaacttttcttttctctcttttcattggt 21273669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 30925541 - 30925613
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaac-tttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||| || ||||||||||   ||||| |||| |||||||| || ||||||||||||||||||||    
T  30925541 aagagtagtgatatttgaacaaccattttatacaacttttggtgacaact-tttttttctctcttttcattggt 30925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 31806484 - 31806411
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||||||||| |||  ||||| |||||||| || |||||| |  ||||||||| ||| ||||||    
T  31806484 aaagagtagtgatatatgtataactctttggtacaacttttattacaactttagttttctctcatttgattggt 31806411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 3e-57; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 22667629 - 22667460
Alignment:
Q  47 gtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttca 146  Q
    |||||||||||| |||| | |||||||||||||||||        ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||    
T  22667629 gtacacccatatgttaattgaatagtttaatgagttattttttttagaaaaaatatattttctattggttgcaattataataattatattttatttctca 22667530  T
Q  147 aaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22667529 aaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattattt 22667460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 28712264 - 28712094
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||| ||||| |||||| |||||||||||||||||        |||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||    
T  28712264 ggtacactcatatgttaaatgaatagtttaatgagttactttttttagaaaaaatatattttttattggttacaattataataattatattttatttctc 28712165  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  28712164 aaaagtgtcggcaaatcaaaattcaattttttttaatttttaatacccataatagtgaatattgattattt 28712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 33196634 - 33196464
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||| |||||| |||||||||||||||||||| |||        ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||    
T  33196634 ggtacatccatatgttaaataaatagtttaatgaattattttttttagaaaaaatttattttctattggttacaattataataattatattttatttctc 33196535  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  33196534 aaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattaattattt 33196464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 33486288 - 33486126
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    ||||||| |||||| |||||| |||||||||||||||||        |||||||||||||||||||||||||||||||         ||||| ||||| |    
T  33486288 tggtacatccatatgttaaatgaatagtttaatgagttatttattttagaaaaaatatattttctattggttacaatt---------atattttatttct 33486198  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33486197 caaaagtatcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattattt 33486126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 41903188 - 41903301
Alignment:
Q  99 atatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataat 198  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  41903188 atatattttctattggttacaattataataattatattttatttcttaaaagtgtcggcaaatcaaaattcaattttttttaatttttaatacccataat 41903287  T
Q  199 agtgaatattgatt 212  Q
    | ||||||||||||    
T  41903288 actgaatattgatt 41903301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 31210707 - 31210828
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  31210707 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 31210806  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  31210807 taatagtgaatattgattattt 31210828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 41085542 - 41085672
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||| |||||| |||||| ||||||||||||| |||        |||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||    
T  41085542 ggtacatccatatgttaaatgaatagtttaatgaattattttttttagaaaaaatatattttctattggttataattataataattatattttatttctc 41085641  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttt 176  Q
    |||||||||||||||||||||||||||||||    
T  41085642 aaaagtgtcggcaaatcaaaattcaaatttt 41085672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 41090310 - 41090440
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||| |||||| |||||| ||||||||||||| |||        |||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||    
T  41090310 ggtacatccatatgttaaatgaatagtttaatgaattattttttttagaaaaaatatattttctattggttataattataataattatattttatttctc 41090409  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttt 176  Q
    |||||||||||||||||||||||||||||||    
T  41090410 aaaagtgtcggcaaatcaaaattcaaatttt 41090440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 36672017 - 36672138
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||| ||| ||    
T  36672017 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaattttttttaatttttattactca 36672116  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  36672117 taatagtgaatattgattattt 36672138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 46153525 - 46153428
Alignment:
Q  119 aattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  46153525 aattataataattatattttatttttcaaaagtgtcggcaaaacaaaattcaaatttttttaatttttattactcataatagtgaatattgattattt 46153428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 46152464 - 46152374
Alignment:
Q  126 ataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  46152464 ataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactcataatagtgaatattgattattt 46152374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 12979622 - 12979793
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| |||||||||||||||||        | ||||||||||||||||||  |||| |||| ||||||||||||| ||||| ||    
T  12979622 ggtacacctacatattaaattaatagtttaatgagttattttttagaaaaaaaatatattttctatcagttataattataataattatattttatttctc 12979721  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| |||||||||||||| ||||||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  12979722 aaaagtgtccgcaaatcaaaattc-aattttttttatttttattactcataatatagtgaatattgattattt 12979793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 36 - 216
Target Start/End: Original strand, 42647427 - 42647606
Alignment:
Q  36 caatttttatggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatat 135  Q
    |||||| |||||||||||||||| |||||| ||||||||||| |||||        |||||||| |||||||||||   ||| |||| |||||| |||||    
T  42647427 caatttctatggtacacccatat-ttaaattaatagtttaataagttattttttttagaaaaaaaatattttctatcatttaaaattataataactatat 42647525  T
Q  136 tatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    | ||||| |||||||||||||| || ||||||||||||||||  | |||||| ||| |||||||||||||||| |||||||    
T  42647526 tttatttctcaaaagtgtcggcgaagcaaaattcaaatttttgaattttttattactcataatagtgaatatttattattt 42647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 5800027 - 5800124
Alignment:
Q  119 aattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||| | ||||||||| ||| ||||||||||||||||||||||||    
T  5800027 aattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaattttctttaatttttattactcataatagtgaatattgattattt 5800124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 6079904 - 6079789
Alignment:
Q  101 atattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatag 200  Q
    |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| || |||||  |||||||| ||| ||||||||    
T  6079904 atattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaatttaatttttttaaatttttattactcataatag 6079805  T
Q  201 tgaatattgattattt 216  Q
    ||||||||||||||||    
T  6079804 tgaatattgattattt 6079789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 39628147 - 39628025
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| |||| ||| |||| |||||||||||||||||||||||  ||||||||||||||  ||||||||| ||| |    
T  39628147 aaaaaaaatattttctatcatttataattataattattttattttatttttcaaaagtgtcggcaaagtaaaattcaaattttgttaatttttattactc 39628048  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  39628047 ataatagtgaatattgattattt 39628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 11444637 - 11444466
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| |||||||||||||||||        | ||||||||||||||||||  |||| |||| ||||||||||||| ||||| |     
T  11444637 ggtacacctacatattaaattaatagtttaatgagttattttttagaaaaaaaatatattttctatcagttataattataataattatattttatttcta 11444538  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    |||||||||  ||||||||||||| ||||||| ||||||||| ||| ||||  ||||| ||||||||||||||    
T  11444537 aaaagtgtccacaaatcaaaattc-aatttttttaatttttattactcataatatagtcaatattgattattt 11444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 33669710 - 33669784
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||    
T  33669710 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttttctcttctcattggtcc 33669784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 51402103 - 51401985
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    ||||||||||||||  ||  |||| |||| ||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||| ||||||||| ||       
T  51402103 aaaaaatatatttttaatcagttataattataataattatattttattttttaaaagtgtcgacaaatcaaaattcaactttttttaatttttattattt 51402004  T
Q  194 ataatagtgaatattgatt 212  Q
    |||||||||||||||||||    
T  51402003 ataatagtgaatattgatt 51401985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 26922043 - 26921871
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaa-atatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||| | ||||||||| ||||||||||| |||||        | ||||| |||||||||||||  |||| |||| ||||||||||||| ||||| |    
T  26922043 ggtacacctacatattaaattaatagtttaataagttattttttttaaaaaaatatatattttctatcagttataattataataattatattttatttct 26921944  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    |||||||||| |||||||||||||| ||| ||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  26921943 caaaagtgtccgcaaatcaaaattc-aatgttttttatttttattactcataatatagtgaatattgattattt 26921871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 30530286 - 30530360
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| | ||||||||    
T  30530286 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctcttcttattggtcc 30530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 45427493 - 45427321
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||| | ||||||||| ||||||||||||| |||        | ||||||||||||||||||  |||| |||| |||||||| |||| ||||| ||||    
T  45427493 tacacctacatattaaattaatagtttaatgaattattttttagaaaaaaaatatattttctatcagttataattataataattctattttatttctcaa 45427394  T
Q  148 aagtgtcggcaaatcaaaattcaaattt--ttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||| |||||||||||||||| |||  || | ||||||| ||| ||||  ||||||||||||||||||||    
T  45427393 aagtgtccgcaaatcaaaattcaatttttatttttatttttattactcataatatagtgaatattgattattt 45427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 8464401 - 8464474
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| | |||||||||||||| ||||||||    
T  8464401 agagtagtgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtcc 8464474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 4511663 - 4511738
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||||| | ||||| |||||| ||||||||||    
T  4511663 aaagagtaatgatatatgtacaaccatttgggacaacttagatgacaactttcattttttctcttctcattggtcc 4511738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 52417716 - 52417641
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| |||| | |||||||||||| | ||||||||    
T  52417716 aaagagtagtgatatatatacaactatttggaacaactttgatgataactttcattttctctcttcttattggtcc 52417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 33422106 - 33422180
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||||| |||||||||||||| ||||||||||    
T  33422106 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 33422180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 44112638 - 44112564
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||||| |||||||||||||| ||||||||||    
T  44112638 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 44112564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 48355032 - 48354909
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattt----ttctaatttttaat 189  Q
    |||| |||||||||||||   |||| ||| ||||||||||||| ||||| |||||||| ||||||||||||||||||| |||    || | |||||||||    
T  48355032 aaaacatatattttctatcaattacgattataataattatattttatttctcaaaagtatcggcaaatcaaaattcaacttttttatttttatttttaat 48354933  T
Q  190 acccataatagtgaatattgatta 213  Q
    || ||||||| | |||||||||||    
T  48354932 actcataatattcaatattgatta 48354909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 43025363 - 43025262
Alignment:
Q  115 ttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattat 214  Q
    |||||||| |||||| |||||| ||||| |||||| ||||||| || ||||||||||||||||  | || ||| ||| |||||||||||||||| |||||    
T  43025363 ttacaattataataactatattttatttctcaaaattgtcggcgaagcaaaattcaaatttttgaatttcttattactcataatagtgaatatttattat 43025264  T
Q  215 tt 216  Q
    ||    
T  43025263 tt 43025262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 34002209 - 34002281
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||| | |||||||||||| | ||||||||    
T  34002209 gagtagtgatatatgtacaactatttgggacaactttgatcacaactttcattttctctcttcttattggtcc 34002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 44641789 - 44641864
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||  |||||||||||  | ||||||| |||||||| |||||||||||||| ||||||||||    
T  44641789 aaagagtagtgatatattgacaaccatttgtgataactttgttgacaacttttattttctctcttctcattggtcc 44641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 50017309 - 50017384
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||| |||| | | |||||||||||||||||||||    
T  50017309 aaagagtactgatatatgtacaaccatttgagacaactttgttgataactttcaatttctctcttttcattggtcc 50017384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 50884658 - 50884731
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| | |||| || |||| ||||| ||||    
T  50884658 agagtagtgatatatgtacaaccatttggtacaactttgatgaaaactttcatttgctatcttctcattagtcc 50884731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 51250180 - 51250241
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    ||||| |||||||||||||| |||||| || |||||||||||||||| ||||||||||||||    
T  51250180 gagtactgatatatgtacaatcatttgaaataactttgatgacaacttttattttctctctt 51250241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 49596426 - 49596351
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| |||| | |||| |||  || ||||||||||    
T  49596426 aaagagtaatgatatatgtacaaccatttggtacaactttgatgataactttaatttgctccattctcattggtcc 49596351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 52369001 - 52369072
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||| |||| | |||||||||||||||||| | |||| |||| || ||||||||||    
T  52369001 agtagtgatatatgtacaactatttagtacaactttgatgacaactttcatttgctctattctcattggtcc 52369072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 21154405 - 21154359
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaact 440  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  21154405 gagtagtgatatatgtacaaccatttgatacaactttgatgacaact 21154359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 24775159 - 24775085
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||  ||||||||||   ||||||||| |||||| | |||||||||||||| ||||||||||    
T  24775159 aagagtagtgatatattgacaaccatttttgacaactttgttgacaatttttattttctctcttctcattggtcc 24775085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 397 - 455
Target Start/End: Complemental strand, 52078600 - 52078542
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||||||||||||||| |||| ||||||||||||||| |||| | ||||||||||||    
T  52078600 tagtgatatatgtacaactattttgaacaactttgatgataactttcattttctctctt 52078542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 11570250 - 11570323
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||||  ||| | |||||||| ||||||||| || | ||||||||||| |||||||    
T  11570250 aagagtagtgatatatgtacaactctttcgtacaactttcatgacaacttttgtcttctctcttttgattggtc 11570323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 49589859 - 49589932
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||  | ||| |||||  ||||||||| |||||||| |||||||||||||| |||||||||    
T  49589859 aagagtagtgatatattgataactatttgtgacaactttgttgacaacttttattttctctcttctcattggtc 49589932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 42829195 - 42829267
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||| |||||||||||||  ||||| |||| ||||||| ||| ||||||||||| | ||||||    
T  42829195 aagagtagtgatatttgtacaaccatttataacaattttggtgacaacccttcttttctctcttcttattggt 42829267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 33198429 - 33198354
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnn-agaaaaaatatattttctattggttacaatt 122  Q
    ||||||||||| |||||| |||||||||||||||||         |||||||||||||||||||||||||||||||    
T  33198429 tacacccatatgttaaatgaatagtttaatgagttatttttttatagaaaaaatatattttctattggttacaatt 33198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 45470726 - 45470800
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||| |||| || |||||| |||||||| ||||||||| |||||| | |||||||||||| | ||||||||    
T  45470726 aagagtagcgataaatttacaactatttggaaaaactttgatcacaactttcattttctctcttcttattggtcc 45470800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 5315396 - 5315335
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctct 452  Q
    ||||||||||| |||||||||||||||||   |||||||||||||| ||| | |||||||||    
T  5315396 aaagagtagtgctatatgtacaaccattttagacaactttgatgacgactttcattttctct 5315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 26547417 - 26547345
Alignment:
Q  394 gagtagtgatatatgtacaaccatttgga-acaactttgatgacaactcttattt-tctctcttttcattggtc 465  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||| ||||| |||| |||||||    
T  26547417 gagtagtgatatatgtacatccatttgaagacaactttgatgacaac-cttatttctctcttttttaattggtc 26547345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 15059802 - 15059734
Alignment:
Q  398 agtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||| |||||||| ||||||| |||| ||||||||||| | | |||||||||||| ||||| ||||    
T  15059802 agtgatacatgtacaatcatttgggacaattttgatgacaattttcattttctctcttctcatttgtcc 15059734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 24612029 - 24611973
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattt 447  Q
    ||||||| ||||||| ||||||||||| |  ||||||||||||||||||| ||||||    
T  24612029 aaagagttgtgatatttgtacaaccatatctaacaactttgatgacaacttttattt 24611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 40139287 - 40139223
Alignment:
Q  402 atatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||| |||||  |||| ||||||||||||| | |||||||||||| ||||| ||||    
T  40139287 atatatgtacaactatttgtgacaagtttgatgacaactttcattttctctcttctcatttgtcc 40139223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 5975714 - 5975647
Alignment:
Q  399 gtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||| ||||||||||| |  ||||||||| ||||||||| |||||| ||||||||  ||||||||    
T  5975714 gtgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtcc 5975647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 457
Target Start/End: Complemental strand, 10426918 - 10426852
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactctta-ttttctctctttt 457  Q
    ||||||||||||||| ||||||||||| ||  |||||||| |||||||| |||| |||||||||||||    
T  10426918 aaagagtagtgatatttgtacaaccatgtgtgacaacttttatgacaac-cttacttttctctctttt 10426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 22389412 - 22389485
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||| |||||| || ||||||||||| | |||||||  ||||||||  | |||||||||||||||||||||    
T  22389412 aaagagtaatgatatttgaacaaccatttg-atcaacttttgtgacaacttcttttttctctcttttcattggtc 22389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 34395805 - 34395855
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttgga-acaactttgatgacaact 440  Q
    |||||||||||||||||||| | ||||||| | ||||||||||||||||||    
T  34395805 aaagagtagtgatatatgtatatccatttgaagacaactttgatgacaact 34395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 4e-56; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 27275818 - 27275985
Alignment:
Q  49 acacccatatattaaataaatagtttaatgagttannnnnnnnagaaaa-aatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||||||| |||||| |||||||||||||||||        |||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  27275818 acacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaaatatattttctattggttacaattataataattatattttatttctcaa 27275917  T
Q  148 aagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattatt 215  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27275918 aagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattatt 27275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 39926165 - 39925994
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagt-tannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||||||||||||||||||||||||||||| | |         ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  39926165 ggtacacccatatattaaataaatagtttaatgaatatttttttcttagaaaaaatatattttctattagttacaattataataattatattttattttt 39926066  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  39926065 caaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatactcatattattgaatattgattattt 39925994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 46880234 - 46880065
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||  |||| |||| ||||||||||||| ||||| ||    
T  46880234 ggtacacccatatattaaataaatagtttaatgagttattttttttagaaaaaatatattttctatcagttataattataataattatattttatttctc 46880135  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||| ||||| |||||||| | |  ||||||||||||||||||||||||    
T  46880134 aaaagtgtcggcaaatcaaaattcaactttttttaattttt-acaatcataatagtgaatattgattattt 46880065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 968820 - 968696
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  968820 agaaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattac 968721  T
Q  192 ccataatagtgaatattgattattt 216  Q
     ||||||||||||||||||||||||    
T  968720 tcataatagtgaatattgattattt 968696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 38035041 - 38034920
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  38035041 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 38034942  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  38034941 taatagtgaatattgattattt 38034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 31603387 - 31603479
Alignment:
Q  124 taataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  31603387 taataattatattatatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactcataatagtgaatattgattattt 31603479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 24189368 - 24189247
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||| ||    
T  24189368 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaaacaaaatttaaatttttttaatttttattactca 24189269  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  24189268 taatagtgaatattgattattt 24189247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 37118707 - 37118532
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||| |||||||||||| |||||||||||||||||        ||||||||||||||||||||   |||||||| ||||||||||||| ||||| ||    
T  37118707 ggtacactcatatattaaatgaatagtttaatgagttattttttttagaaaaaatatattttctatcatttacaattataataattatattttatttctc 37118608  T
Q  146 aaaagtg------tcggcaaatcaaaattcaaatttttc-taatttttaatacccataatagtgaatattgattat 214  Q
    |||||||      || |||||||||||||||| |||||  ||||||||||||| ||| ||||||||||||||||||    
T  37118607 aaaagtgaaagtgtcagcaaatcaaaattcaacttttttataatttttaatactcatgatagtgaatattgattat 37118532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 30819490 - 30819661
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| |||||||||||||||||        | |||||| |||||||||||  |||| |||| ||||||||||||| ||||| ||    
T  30819490 ggtacacctacatattaaattaatagtttaatgagttatttttttga-aaaaaacatattttctatcagttataattataataattatattttatttctc 30819588  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| |||||||||||||||| ||||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  30819589 aaaagtgtccgcaaatcaaaattcaatttttttttatttttattactcataatatagtgaatattgattattt 30819661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 45704823 - 45704699
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaatac 191  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||| ||   ||||| |||||||||||||    
T  45704823 aaaaaatatattttctattagttacaattataataattatattttattttttaaaagtgtcggcaaattaaaatttaattttttttttaatttttaatac 45704724  T
Q  192 ccataatagtgaatattgattattt 216  Q
      ||| || ||||||||||||||||    
T  45704723 ttatattattgaatattgattattt 45704699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 20883710 - 20883830
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||| |||||||||||   ||| |||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||  |||||||| | |    
T  20883710 agaaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtatcggcaaagcaaaattcaaattttttaaatttttattgc 20883809  T
Q  192 ccataatagtgaatattgatt 212  Q
     ||||||||||||||||||||    
T  20883810 tcataatagtgaatattgatt 20883830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 428201 - 428035
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||||||||| |||||| |||||||||||||||||        | |||||| |||||||||||   |||||||| |||||| |||||| ||||| |    
T  428201 tggtacacccatat-ttaaattaatagtttaatgagttatttt----aaaaaaaaaatattttctatcatttacaattataataactatattttatttct 428107  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||| || ||||||||||| ||||  | |||||| ||| |||||||||||||||| |||||||    
T  428106 caaaagtgtcggcgaagcaaaattcaaaattttgaattttttattactcataatagtgaatatttattattt 428035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37002440 - 37002334
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaata 190  Q
    ||||||||||||||  |||||  |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  37002440 agaaaaaatatatt--ctattacttacaattataataattatactttatttttcaaaagtgtcggcaaatcaaaattcaatttttttttaatttttaata 37002343  T
Q  191 cccataata 199  Q
    | |||||||    
T  37002342 ctcataata 37002334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 24202902 - 24203078
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaa-atatattttctattggttacaattgtaataattatattatatttt 143  Q
    ||||||||| | ||||||||| |||||||||||||||||        | ||||| |||||||||||||  |||| |||| ||||| ||||||| |||||     
T  24202902 tggtacacctacatattaaattaatagtttaatgagttattttttagaaaaaaatatatattttctatcagttataattataatagttatattttatttc 24203001  T
Q  144 tcaaaagtgtcggcaaatcaaaattcaaatttt--tctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||||| |||||||||||||||| ||||  | | ||||||| ||| ||||  ||||||||||||||||||||    
T  24203002 tcaaaagtgtccgcaaatcaaaattcaattttttattttatttttattactcataatatagtgaatattgattattt 24203078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 8294291 - 8294419
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||||| ||||||||| ||||||||||||||||         || ||||||| |||||||||  |||||| || | ||||||||||| ||||||||||    
T  8294291 tacacccaaatattaaatgaatagtttaatgagtt-tcttttttagtaaaaatacattttctatctgttacatttatgataattatattttatttttcaa 8294389  T
Q  148 aagtgtcggcaaatcaaaattcaaattttt 177  Q
    |||||||||||||||||||||||| |||||    
T  8294390 aagtgtcggcaaatcaaaattcaacttttt 8294419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 27070557 - 27070630
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  27070557 agagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtcc 27070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 27207756 - 27207683
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  27207756 agagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtcc 27207683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 30391328 - 30391256
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||| ||||||| ||||||||||    
T  30391328 gagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttactctcttctcattggtcc 30391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 17500880 - 17500807
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||| | ||||||||    
T  17500880 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtcc 17500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 17552334 - 17552407
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||| | ||||||||    
T  17552334 agagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtcc 17552407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 29982374 - 29982253
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| ||||||||||||  |||||||| |||||| |||||| ||||| |||||| ||||| | || |||||||||| |||||  | |||||| ||| ||    
T  29982374 aaaaaaatattttctattatttacaattataataactatattttatttatcaaaaatgtcgtcgaagcaaaattcaattttttaaattttttattactca 29982275  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||| ||||||||||||||||    
T  29982274 taataatgaatattgattattt 29982253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 5724219 - 5724148
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||   |||| || |||||||||| |||||||||||||||||||||||||    
T  5724219 agtagtgatatatgtacaaccatttaagacaaattggatgacaacttttattttctctcttttcattggtcc 5724148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 36186781 - 36186850
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcatt 461  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||| ||||||  ||||||||||||    
T  36186781 aagagtaatgatatatgtacaaccatttggtataactttgatgacaacttttatttgttctcttttcatt 36186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 21153235 - 21153163
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||||||| | |||||||||||||| |||||||    
T  21153235 agagtagtgatatatgtacaactttttggtacaactttcatgacaactttgattttctctcttttgattggtc 21153163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 49089053 - 49089125
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||| ||||   |||||||||||||||||| | |||||||||||| ||||||||||    
T  49089053 gagtagtgatatatgtacaacaatttctgacaactttgatgacaactttcattttctctcttctcattggtcc 49089125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 31436601 - 31436528
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||| | ||||| |||||| |||||||||    
T  31436601 aaagagtagtgatatatgtacaaccatttgatacaa-tttgatgacaactttcattttatctcttctcattggtc 31436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 47644891 - 47644819
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||  |||||| | |||||||||||||||| | |||| ||||||| ||||||||||    
T  47644891 gagtagtgatatatgtacaattatttggtataactttgatgacaactttcatttgctctcttctcattggtcc 47644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 24009083 - 24009162
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatt 174  Q
    ||||| |||||||||||   ||| |||  ||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  24009083 aaaaaaatattttctatcatttataataataataattatattttatttttcaaaagtgtcggaaaagcaaaattcaaatt 24009162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 36920969 - 36920896
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||||  ||||| |||||||| || |||||| | |||||||||| ||| |||||||    
T  36920969 aagagtagtgatatatgtacaactctttggtacaacttttattacaactttgattttctctcatttgattggtc 36920896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 12142066 - 12141995
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||| || |||||||||||  ||||||||  |||||||| || |||||| ||||||||||||||    
T  12142066 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtc 12141995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 19503436 - 19503315
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaa-tttttaataccca 194  Q
    |||| |||||||||||   |||||||| ||||||  ||||| ||||| |||||| ||| ||| || |||||||||| | ||| ||| |||||| |||  |    
T  19503436 aaaaaatattttctatcatttacaattataataacaatattttatttctcaaaaatgttggcgaagcaaaattcaactatttttaattttttattactta 19503337  T
Q  195 taatagtgaatattgattattt 216  Q
    |||||||||||||| |||||||    
T  19503336 taatagtgaatatttattattt 19503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 45430329 - 45430208
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaa-tttttaataccca 194  Q
    |||| |||||||||||   |||||||| ||||||  ||||| ||||| | |||| ||| ||| || |||||||||| ||||| ||| |||||| |||  |    
T  45430329 aaaaaatattttctatcatttacaattataataacaatattttatttcttaaaaatgttggcgaagcaaaattcaattttttttaattttttattactta 45430230  T
Q  195 taatagtgaatattgattattt 216  Q
    |||||||||||||| |||||||    
T  45430229 taatagtgaatatttattattt 45430208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 45981304 - 45981373
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcatt 461  Q
    ||||||| ||||||||||||||| |||    | |||||||||||||||| ||| ||||||||||||||||    
T  45981304 aagagtaatgatatatgtacaactattaatgataactttgatgacaacttttactttctctcttttcatt 45981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 27070707 - 27070743
Alignment:
Q  544 tgtaataaactgattgtacaaatatcatttctcttca 580  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27070707 tgtaataaaatgattgtacaaatatcatttctcttca 27070743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 27207606 - 27207570
Alignment:
Q  544 tgtaataaactgattgtacaaatatcatttctcttca 580  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27207606 tgtaataaaatgattgtacaaatatcatttctcttca 27207570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 5978761 - 5978690
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||| || |||||||| ||  |||||| |  ||||||||  |||||||||||||||||||||||    
T  5978761 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcattggtc 5978690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 7807240 - 7807168
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaac-tttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||||||||   ||||| |||||||||||  ||| ||||||||||||||||||||    
T  7807240 aaagagtagtgatatttgaacaaccatttcatacaacttttgatgacaa--cttcttttctctcttttcattggt 7807168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 15877162 - 15877284
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttct--aatttttaataccc 193  Q
    |||| |||||||||||   |||||||| ||||||  ||||| ||||| |||||| ||| ||| || |||||||||| ||||| |  | |||||| |||      
T  15877162 aaaaaatattttctatcatttacaattataataacaatattttatttctcaaaaatgttggcgaagcaaaattcaacttttttttaattttttattactt 15877261  T
Q  194 ataatagtgaatattgattattt 216  Q
    ||||||||||||||| |||||||    
T  15877262 ataatagtgaatatttattattt 15877284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 466
Target Start/End: Original strand, 24267533 - 24267608
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||  |||||| ||||||||||| |  ||||||||||||||||||| |||||| |||| |||  ||||||||    
T  24267533 aaagagttatgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctttttctattggtcc 24267608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 28501657 - 28501535
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttct--aatttttaataccc 193  Q
    |||| |||||||||||   ||||| || ||||| | ||||| ||||| |||||| ||||||| || |||||||||| ||||| |  | |||||| |||      
T  28501657 aaaaaatattttctatcatttacagttataatactaatattttatttctcaaaaatgtcggcgaagcaaaattcaacttttttttaattttttattactt 28501558  T
Q  194 ataatagtgaatattgattattt 216  Q
    ||||||||||||||| |||||||    
T  28501557 ataatagtgaatatttattattt 28501535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 29273077 - 29273160
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattttt 177  Q
    |||||| ||||||||||||  |||||||| |||||| |||||| ||||| |||||||| | | | || |||||||||| |||||    
T  29273077 aaaaaaaatattttctattatttacaattataataactatattttatttatcaaaagtattgtcgaagcaaaattcaatttttt 29273160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 33212208 - 33212137
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||  ||||| |||||||  ||||||||| | ||| |||||| ||| |||||||    
T  33212208 gagtagtgatatatgtacaactctttggtacaacttctatgacaactttaattgtctctcatttgattggtc 33212137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 46651857 - 46651783
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||| || |||||||| ||  |||| | |  ||||||||  |||||||||||||||||||||||    
T  46651857 aaagagtagtgatatttgaacaaccatatgatacaattcttgtgacaacttctattttctctcttttcattggtc 46651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 18067814 - 18067875
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||| ||||||| |||||||| || |  ||||||||||||||||||| |||||| |||||||    
T  18067814 gagttgtgatatttgtacaactatatctaacaactttgatgacaacttttatttactctctt 18067875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 7e-55; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 52760154 - 52759985
Alignment:
Q  47 gtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttca 146  Q
    |||||| |||||||||||| |||||||||||||||||        ||||||||||||||||||||| |||| |||| ||||||||||||| ||||| |||    
T  52760154 gtacacgcatatattaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattagttataattataataattatattttatttctca 52760055  T
Q  147 aaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  52760054 aaagtgtcggcaaatcaaaattcaattttttttaatttttaatacccataatagtgaatattgattattt 52759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 23390538 - 23390710
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||||||||||||||| |||||||||||||||||        |||||| ||||||||||||||||||||||||  |||||||||||| ||||| ||    
T  23390538 ggtacacccatatattaaatgaatagtttaatgagttattttttttagaaaatatatattttctattggttacaattagaataattatattttatttctc 23390637  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttct--aatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||    
T  23390638 aaaagtgtcggcaaatcaaaattcaatttttttttaaatttttaatacccataatagtgaatattgattattt 23390710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 30839611 - 30839439
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  30839611 ggtacacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctc 30839512  T
Q  146 aaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||||    
T  30839511 aaaagtgtcggcaaatcaaaattcaattttttttttaatttttaatacccataatagtgaatattgtttattt 30839439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 44 - 214
Target Start/End: Original strand, 20927477 - 20927649
Alignment:
Q  44 atggtacacccatatattaaataaatagtttaatgagttannnnnnnn-agaaaa-aatatattttctattggttacaattgtaataattatattatatt 141  Q
    |||||||| ||||||||||||| |||||||||||||||||         |||||| |||||||||||||||||||| |||| ||||||||||||| ||||    
T  20927477 atggtacatccatatattaaatgaatagtttaatgagttatttttttttagaaaaaaatatattttctattggttataattataataattatattttatt 20927576  T
Q  142 tttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattat 214  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20927577 tctcaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattat 20927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 28013371 - 28013201
Alignment:
Q  48 tacacccatatattaaa-taaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttca 146  Q
    ||||||||||| ||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||    
T  28013371 tacacccatatgttaaaataaatagtttaatgagttattttttttaaaaaaaatatattttctattggttacaattataataattatattttatttctca 28013272  T
Q  147 aaagtgtcggcaaatcaaaattcaa-atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  28013271 aaagtgtcggcaaatcaaaattcaatttttttttaatttttaatacccataatagtgaatattgattattt 28013201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 52104775 - 52104609
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||| | |||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  52104775 ggtacatctatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctc 52104676  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgatt 212  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  52104675 aaaagtgtcggcaaatcaaaattcaattttttttaatttttaatacccataatagtaaatattgatt 52104609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 54851080 - 54851250
Alignment:
Q  47 gtacacccatatattaaataaatagtttaatgagt-tannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||||||||| ||||||||||||| | |         ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  54851080 gtacacccatatattaaatgaatagtttaatgaatatttttttcttagaaaaaatatattttctattagttacaattataataattatattttatttttc 54851179  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  54851180 aaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatactcatattattgaatattgattattt 54851250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 25814746 - 25814577
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| ||||||||||| |||||        |||||||||||||||||||  |||||||||| ||||||||||||| ||||| ||    
T  25814746 ggtacacccatatgttaaatgaatagtttaataagttattttttt-agaaaaaatatattttctaaaggttacaattataataattatattttatttctc 25814648  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  25814647 aaaagtgtcagcaaatcaaaattcaaatttttttaatttctaatacccataatagtgaatattgattattt 25814577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 46548447 - 46548571
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  46548447 agaaaaaatatattttctattagttacaattataataattatattttattttttaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatac 46548546  T
Q  192 ccataatagtgaatattgattattt 216  Q
     ||||||| ||||||||||||||||    
T  46548547 tcataatattgaatattgattattt 46548571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 48254262 - 48254144
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  48254262 aaaaaaaatattttctattggttacaattataataattatattttatttctcaaaagtatcggcaaatcaaaattcaaatttttttaatttttaataccc 48254163  T
Q  194 ataatagtgaatattgatt 212  Q
    |||||||||||||||||||    
T  48254162 ataatagtgaatattgatt 48254144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 40319034 - 40319209
Alignment:
Q  45 tggtacacccatatattaaataaatagtttaatgagttannnnnnnn-agaaaaaatatattttctattggttacaattgtaataattatattatatttt 143  Q
    ||||||||||||||||||||| |||||||||||||||||         |||||||||||||||| ||||||||||||||  |||||||||||| |||||     
T  40319034 tggtacacccatatattaaatgaatagtttaatgagttatttttttttagaaaaaatatattttttattggttacaattagaataattatattttatttc 40319133  T
Q  144 tcaaaagtgtcggcaaatcaaaattcaaatttttctaa---tttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||| ||||||||||||||| ||||| |||   |||||||||||||||||||||||||||||||||||    
T  40319134 tcaaaagtgtcgacaaatcaaaattcaattttttttaaaattttttaatacccataatagtgaatattgattattt 40319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 4540877 - 4540756
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    |||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||    
T  4540877 aaaaatattttttctattagttacaattataataattatattttatttttcaaaagtgtcggcaaatcaaaattcaaaattttttaatttttaatactca 4540778  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||| ||||||||||||||||    
T  4540777 taatattgaatattgattattt 4540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 30951468 - 30951319
Alignment:
Q  67 aatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaa 166  Q
    |||||||||||||||||        ||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  30951468 aatagtttaatgagttattttttttagaaaaaatatattttctatttgttacaattataataattatattttatttctcaaaagtgtcggtaaatcaaaa 30951369  T
Q  167 ttcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||| || |||| |||| |||||||||||||||||||||||||    
T  30951368 ttcaaatttttttagttttaaatatccataatagtgaatattgattattt 30951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 50716270 - 50716441
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagt-tannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||||||||||||||| ||||||||||||| | |         |||||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  50716270 ggtacacccatatattaaatgaatagtttaatgaatatttttttcttagaaaaaatatattttttattagttacaattataataattatattttattttt 50716369  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||  |||| || ||||||||||||||||    
T  50716370 caaaagtgttggcaaatcaaaattcaattttttttaatttttaatattcatattattgaatattgattattt 50716441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 4150485 - 4150324
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||  ||||||||||||||||         |||||||||||||||||||||||||||||||         ||||| ||||| ||    
T  4150485 ggtacacccatatgttaaacgaatagtttaatgagtttttttttttagaaaaaatatattttctattggttacaatt---------atattttatttctc 4150395  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  4150394 aaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatatccataatagtgaatattgattattt 4150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 39512744 - 39512862
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  39512744 aaaaaatttattttctattagttacaattataataattatattttatttttcaaaagtgtcggcaaatcaaaatttaaatttttttaatttttaatactc 39512843  T
Q  194 ataatagtgaatattgatt 212  Q
    ||| |  ||||||||||||    
T  39512844 atattgttgaatattgatt 39512862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 17616725 - 17616604
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  17616725 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 17616626  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  17616625 taatagtgaatattgattattt 17616604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 45953740 - 45953861
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  45953740 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 45953839  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  45953840 taatagtgaatattgattattt 45953861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 16917257 - 16917428
Alignment:
Q  45 tggtacacccatatatt-aaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttt 143  Q
    |||||||||| |||||| |||| ||||||||||||| |||        |||||||| |||||||||||   ||| |||| ||||||| ||||| ||||||    
T  16917257 tggtacacccgtatatttaaatgaatagtttaatgatttattttctttagaaaaaa-atattttctatcatttataattataataatcatattttatttt 16917355  T
Q  144 tcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  16917356 tcaaaagtgtcggcaaagaaaaattcaaatttttttaatttttattactcataatagtgaatattgattattt 16917428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 1182678 - 1182799
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||| |||  ||||||||||||||| ||||||||| ||| ||    
T  1182678 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggaaaagtaaaattcaaatttttttaatttttattactca 1182777  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  1182778 taatagtgaatattgattattt 1182799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 27735235 - 27735115
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccat 195  Q
    |||| |||||||||||   ||| |||| ||||||||||||| |||||||||||||||||| |||| |||||||||| ||||| ||| ||||| ||| |||    
T  27735235 aaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcgacaaagcaaaattcaattttttttaacttttattactcat 27735136  T
Q  196 aatagtgaatattgattattt 216  Q
    |||||||||||||||||||||    
T  27735135 aatagtgaatattgattattt 27735115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 36187980 - 36188103
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaatacc 192  Q
    |||||| |||||||||||   ||| |||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||  ||||| ||||||||| |||     
T  36187980 aaaaaaaatattttctatcatttataattataataattacattttatttttcaaaagtgtcggcaaagcaaaattcaatttttttttaatttttattact 36188079  T
Q  193 cataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||    
T  36188080 cataatagtgaatattgattattt 36188103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 22413599 - 22413771
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| ||||||||||||| |||        | |||| |||||||||||||   ||| |||| ||||||||||||| ||||| ||    
T  22413599 ggtacacctacatattaaattaatagtttaatgaattatttattagaaaaaatatatattttctatcaattataattataataattatattttatttctc 22413698  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| |||||||||||||||| ||||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  22413699 aaaagtgtccgcaaatcaaaattcaatttttttttatttttattactcataatatagtgaatattgattattt 22413771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 24346925 - 24347046
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| |||||||||||||  |||| |||||||||| |||||| |||||||||| ||||| | ||||||| ||| ||    
T  24346925 aaaaaaatattttctatcatttataattataataattatatttaatttctcaaaagtgttggcaaagcaaaattcaatttttttttatttttattactca 24347024  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  24347025 taatagtgaatattgattattt 24347046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 10332720 - 10332844
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||| |||||||||||||   |||  ||| ||||||||||||| ||||| | |||||||| ||||||||||||||||| ||||| ||||||||| ||     
T  10332720 agaaaatatatattttctatcaattatgattataataattatattttatttcttaaaagtgttggcaaatcaaaattcaattttttttaatttttattaa 10332819  T
Q  192 ccataatagtgaatattgattattt 216  Q
      |||||||||||||||||||||||    
T  10332820 ttataatagtgaatattgattattt 10332844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 45274445 - 45274373
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  45274445 gagtggtgatatatgtacaactatttgggacaactttgatgacaactctcattttctctcttttcattggtcc 45274373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 49144309 - 49144140
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||| | ||||||||| |||||||||||||||||        | |||||| |||||||||||  |||| |||| ||||||||||||| ||||| ||    
T  49144309 ggtacacctacatattaaattaatagtttaatgagttattttt---aaaaaaaaaatattttctatcagttataattataataattatattttatttctc 49144213  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||| | |||||||||||||  ||||| | ||||||| ||| ||||  |||||||| |||||||||||    
T  49144212 aaaagtgtccgtaaatcaaaattcattttttttttatttttattactcataatatagtgaaaattgattattt 49144140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 34792199 - 34792077
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaattt-ttctaatttttaataccc 193  Q
    ||||| |||||||||||   ||| |||| |||||||||||||  |||| |||||||||| |||||| |||||||||| ||| || | ||||||| ||| |    
T  34792199 aaaaaaatattttctatcatttataattataataattatatttaatttctcaaaagtgttggcaaagcaaaattcaactttatttttatttttattactc 34792100  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  34792099 ataatagtgaatattgattattt 34792077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 10096634 - 10096703
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||| |||||||| |||||||||||||||||| | |||| ||||||| ||||||||||    
T  10096634 tagtgatatatgtacagccatttggtacaactttgatgacaactttcatttgctctcttctcattggtcc 10096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 34113997 - 34114078
Alignment:
Q  385 ttcatcaaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||| | |||||||||||||||||||| ||||||||||||||||||||  |||| | |||||||||||| | ||||||||    
T  34113997 ttcatctatgagtagtgatatatgtacaatcatttggaacaactttgatggtaactttcattttctctcttcttattggtcc 34114078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 35332887 - 35332815
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||| |||||| |  ||||||||||||| |||| |||||||||||||||||| |||||    
T  35332887 agagtagtgatatatgtaccaccattggtgacaactttgatgataactattattttctctcttttcactggtc 35332815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 34936867 - 34936746
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaa-tttttaataccca 194  Q
    |||| |||||||||||   |||||||| ||||||  ||||| |||||||||||||||| | | || |||||||||| ||||| ||| |||||| |||  |    
T  34936867 aaaaaatattttctatcatttacaattataataacaatattttatttttcaaaagtgttgtcgaagcaaaattcaactttttttaattttttattactta 34936768  T
Q  195 taatagtgaatattgattattt 216  Q
    |||||||||||||| |||||||    
T  34936767 taatagtgaatatttattattt 34936746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 42516812 - 42516744
Alignment:
Q  398 agtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||  |||| ||||||||||||| | ||||| |||||| ||||||||||    
T  42516812 agtgatatatgtacaaccatttgtgacaattttgatgacaactttcattttttctcttctcattggtcc 42516744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 53452016 - 53451892
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||||||||||||||||  |||||||| | |||| |||||| ||||| | |||||| | |   || |||||||||| ||| |  | |||||| |||    
T  53452016 agaaaaaatatattttctattatttacaattattataactatattttatttattaaaagtattgttgaagcaaaattcaattttctaaattttttactac 53451917  T
Q  192 ccataatagtgaatattgattattt 216  Q
     ||||||||||||||||||||||||    
T  53451916 tcataatagtgaatattgattattt 53451892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 4489685 - 4489751
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    ||||||||||||||||||||||||  ||||| |||||||| ||||||||| | ||||||| ||||||    
T  4489685 aaagagtagtgatatatgtacaactctttggtacaactttcatgacaactttaattttctatctttt 4489751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 11012308 - 11012235
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||| | ||||||||| || | ||||||||    
T  11012308 agagtagtgatatatgtacaatcatatgtgacaactttgatgacaactttcattttctcttttcttattggtcc 11012235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 17363409 - 17363340
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||| |||| ||||||||   |||||||||||||||||| | |||| ||||||||||||||||||    
T  17363409 tagtgatatttgtaaaaccattttatacaactttgatgacaactttcatttgctctcttttcattggtcc 17363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 41154211 - 41154166
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaa 438  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  41154211 agagtagtgatatatgtacaaccatttgatacaactttgatgacaa 41154166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 42882640 - 42882575
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttt 456  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||| | | ||||| |||||||    
T  42882640 aaagagtagtgatatatgtacaaccatgtgtgacaactttgatgacaattttcattttttctcttt 42882575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 25139848 - 25139908
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    |||||||||||| |||||||||||| ||||||||||| | |||| ||||||||||| ||||    
T  25139848 tagtgatatatgaacaaccatttgggacaactttgatcataacttttattttctctttttt 25139908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 1688315 - 1688389
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||  |||||||||||  |||| |||  | |||||| |||||||||||||| ||||||||||    
T  1688315 aagagtagtgatatattgacaaccatttgtgacaattttattcacaacttttattttctctcttctcattggtcc 1688389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 4511995 - 4511938
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttct 450  Q
    |||||||| ||||||||||||||||| |  ||||||| |||||||||| |||||||||    
T  4511995 agagtagtaatatatgtacaaccattggtgacaacttagatgacaactattattttct 4511938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 4514153 - 4514226
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||| |||||||||||||||| |||    |||||||||||||||| | | |||||||||||| ||||||||||    
T  4514153 agagtggtgatatatgtacaactattcatgacaactttgatgacaattttcattttctctcttctcattggtcc 4514226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 29406923 - 29406996
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||||||||||||  ||||| |||||||| ||||||| | |  |||||||| |||| ||||||    
T  29406923 aaagagtagtgatatatgtacaactctttggtacaactttcatgacaattttggttttctctattttgattggt 29406996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 39880921 - 39880990
Alignment:
Q  396 gtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||  ||| | |||||||| ||||||||| |  ||||||||||||| |||||||    
T  39880921 gtagtgatatatgtacaactctttcgtacaactttcatgacaactttggttttctctcttttgattggtc 39880990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 40335956 - 40335888
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||| | |||||||||||  |||||||||    
T  40335956 gagtagtgatatatgtacaa---tttgagacaactttgatgacaactttcattttctctctcctcattggtc 40335888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 42915105 - 42915178
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| |||||  ||||||||  ||||||||  | ||||||||||||||||||||    
T  42915105 aaagagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggt 42915178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 50159116 - 50159055
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||| ||||||| ||||||||||| || ||||||||| ||||||||| |||||| |||||||    
T  50159116 gagttgtgatatttgtacaaccatatgtaacaactttaatgacaacttttatttactctctt 50159055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 56272666 - 56272789
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttct---aatttttaatacc 192  Q
    |||| |||||||||||   ||||| || ||||||| ||||| ||||| |||||| ||||||| || |||||||||| ||||| |   | |||||| |||     
T  56272666 aaaaaatattttctatcatttacagttataataataatattttatttctcaaaaatgtcggcgaagcaaaattcaactttttttttaattttttattact 56272765  T
Q  193 cataatagtgaatattgattattt 216  Q
     ||||||||||||||| |||||||    
T  56272766 tataatagtgaatatttattattt 56272789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 29526040 - 29525968
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||| |||||||| | || |||| |||||||| | ||||  |||||| ||||||||||    
T  29526040 gagtagtgatatatgtacatccatttggtataattttgttgacaactttaatttgttctcttctcattggtcc 29525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 31275329 - 31275257
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||| || |||||||||||  ||||||||  |||||| |  | |||||||||||||||||||||    
T  31275329 agagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtc 31275257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 53356965 - 53357037
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||  ||||| |||||||  ||||||||| | ||| |||||| ||| |||||||    
T  53356965 agagtagtgatatatgtacaactctttggtacaacttctatgacaactttgattgtctctcatttgattggtc 53357037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 5234360 - 5234431
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||| || |||||||||||  ||||||||  |||||| | || ||||||||||||| |||||||    
T  5234360 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtc 5234431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 4896387 - 4896460
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaa-ctcttattttctctcttttcattggtc 465  Q
    |||||||||||||| || ||| | ||||| |||||||||  |||||| ||||| |||||||||||||||||||||    
T  4896387 aagagtagtgatatttgaacatctatttgaaacaacttttgtgacaacctctt-ttttctctcttttcattggtc 4896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 393 - 455
Target Start/End: Original strand, 8906352 - 8906414
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||| |||||||||||||||||| ||  |||| ||||||||||| | | ||||||||||||    
T  8906352 agagtaatgatatatgtacaaccatatgtgacaattttgatgacaattttcattttctctctt 8906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 19720529 - 19720575
Alignment:
Q  394 gagtagtgatatatgtacaaccatttgga-acaactttgatgacaac 439  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||    
T  19720529 gagtagtgatatatgtacatccatttgaagacaactttgatgacaac 19720575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 23444719 - 23444765
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaa 438  Q
    |||||||||||||||||||||| ||||||||| || ||||| |||||    
T  23444719 aagagtagtgatatatgtacaatcatttggaataattttgaagacaa 23444765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 39067850 - 39067916
Alignment:
Q  400 tgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||| ||| ||||||| |  ||||||||||||||||||| |||||| ||||||||  ||||||||    
T  39067850 tgatatttgttcaaccatatctaacaactttgatgacaacttttatttactctctttctattggtcc 39067916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 51540737 - 51540807
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||| ||||||  ||||| |||||||| ||||||| | |  ||||||||||||| |||||||    
T  51540737 agtagtgatatatatacaactctttggtacaacttttatgacaattttggttttctctcttttgattggtc 51540807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 4540926 - 4540893
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatga 79  Q
    |||||||||||||||||||| |||||||||||||    
T  4540926 ggtacacccatatattaaatgaatagtttaatga 4540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 10096781 - 10096818
Alignment:
Q  544 tgtaataaactgattgtacaaatatcatttctcttcat 581  Q
    ||||||||| || |||||||||||||||||||||||||    
T  10096781 tgtaataaagtggttgtacaaatatcatttctcttcat 10096818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 11063976 - 11064041
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctttt 457  Q
    |||||||||||||| || ||||||||||   ||||||||| |||||||| | ||||||| ||||||    
T  11063976 aagagtagtgatatttgaacaaccatttaagacaactttggtgacaactttcattttctttctttt 11064041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 544 - 577
Target Start/End: Complemental strand, 17363262 - 17363229
Alignment:
Q  544 tgtaataaactgattgtacaaatatcatttctct 577  Q
    ||||||||| ||||||||||||||||||||||||    
T  17363262 tgtaataaagtgattgtacaaatatcatttctct 17363229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 464
Target Start/End: Complemental strand, 31240833 - 31240760
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaacttt-gatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||| || ||||||||||   |||||||| | ||||||||  | ||||||||||||||||||||    
T  31240833 aagagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattggt 31240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 7e-52; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 542450 - 542574
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  542450 agaaaaaatatattttctattggttacaattataataattatattttatttctcaaaaatgtcggcaaatcaaaattcaaatttttttaatttttaatac 542549  T
Q  192 ccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||    
T  542550 ccataatagtgaatattgattattt 542574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 47600315 - 47600145
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  47600315 ggtacacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctc 47600216  T
Q  146 aaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||||||||    
T  47600215 aaaagtgtcggcaaatcaaaattcaatttttttttaatttttaataccca-aatagtgaatattgattattt 47600145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 54830860 - 54831033
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    |||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||  |||||||||||| ||||| ||    
T  54830860 ggtacacccatatattaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattagaataattatattttatttctc 54830959  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttct---aatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||| ||||| |   |||||||||||||| |||||||||||| |||||||||    
T  54830960 aaaagtgtcggcaaatcaaaattcaattttttttttaaatttttaatacccgtaatagtgaataatgattattt 54831033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 25558438 - 25558556
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||    
T  25558438 aaaagatatattttctattggttacaattataataattatattttatttctcaaaagtgtcagcaaatcaaaatttaaatttttttaatttttaataccc 25558537  T
Q  194 ataatagtgaatattgatt 212  Q
    |||||||||||||||||||    
T  25558538 ataatagtgaatattgatt 25558556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 40283955 - 40284123
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | ||| |||| ||||||||||||| ||||| ||    
T  40283955 ggtacacccatatattaaataaatagtttaatgagttattttttt-agaaaaaatatattttctatcgattataattataataattatattttatttctc 40284053  T
Q  146 aaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||| ||||| |||||||| | |  ||||||||||||||||||||||||    
T  40284054 aaaagtgtcggcaaatcaaaattcaactttttttaattttt-acaatcataatagtgaatattgattattt 40284123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 47243770 - 47243893
Alignment:
Q  93 gaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacc 192  Q
    |||||||||||||| ||||| ||||||||| |||||| |||||| ||||| |||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  47243770 gaaaaaatatatttcctattagttacaattataataaatatattttatttctcaaaagtgtcggcaaattaaaattaaaatttttttaatttttaatacc 47243869  T
Q  193 cataatagtgaatattgattattt 216  Q
    |||||||| ||||||| |||||||    
T  47243870 cataatagcgaatatttattattt 47243893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 8324474 - 8324593
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |    
T  8324474 aaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactc 8324573  T
Q  194 ataatagtgaatattgatta 213  Q
    ||||||||||||||||||||    
T  8324574 ataatagtgaatattgatta 8324593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 45726884 - 45726995
Alignment:
Q  105 tttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaa 204  Q
    |||||||| |||| |||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||| ||||    
T  45726884 tttctattagttataattataataattatattttatttctcaaaagtgtcggtaaatcaaaattcaacattttctaatttttaatactcataatattgaa 45726983  T
Q  205 tattgattattt 216  Q
    ||||||||||||    
T  45726984 tattgattattt 45726995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 54910834 - 54910957
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaa-tttttctaatttttaatacc 192  Q
    |||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||     
T  54910834 aaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaattttttttaatttttattact 54910933  T
Q  193 cataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||    
T  54910934 cataatagtgaatattgattattt 54910957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 43744538 - 43744422
Alignment:
Q  99 atatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaatacccata 196  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||   ||||| |||||||||||||||       
T  43744538 atatattttctattggttacaattataataattatattttatttctcaaaagtgtcggcaaattaaaattcaattttttttttaatttttaataccc--- 43744442  T
Q  197 atagtgaatattgattattt 216  Q
    ||||||||||||| ||||||    
T  43744441 atagtgaatattgtttattt 43744422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 41575101 - 41574931
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||| ||||||||||| |||||||||||||||||        |  | | |||||||||||||  |||| |||| ||||||||||||| ||||| ||||    
T  41575101 tacacctatatattaaattaatagtttaatgagttattttaaaaaatatatatatattttctatcagttataattataataattatattttatttctcaa 41575002  T
Q  148 aagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataat--agtgaatattgattattt 216  Q
    ||||| | |||||||||||||||| ||||| ||||||||| ||| ||| ||  ||||||||||||||||||    
T  41575001 aagtggctgcaaatcaaaattcaattttttttaatttttattactcattatacagtgaatattgattattt 41574931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 13451694 - 13451616
Alignment:
Q  138 tatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  13451694 tatttctcaaaagtggcagcaaatcaaaattcaaatttttttaatttttaatacccataatagtggatattgattattt 13451616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 22154051 - 22153974
Alignment:
Q  389 tcaaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||| | |||| ||||||||||||||||||    
T  22154051 tcaaagagtagtgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtcc 22153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 11233917 - 11233988
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||    
T  11233917 aaagagtactgatatatgtacaaccatttggtacaactttgatgacaacttttatttactctcttctcattg 11233988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 52458305 - 52458199
Alignment:
Q  48 tacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttcaa 147  Q
    |||||||||||||||||||||||||||||||| |            ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  52458305 tacacccatatattaaataaatagtttaatgaatatttttttcttaaaaaaatatattttctattagttacaattataataattatattttatttttcaa 52458206  T
Q  148 aagtgtc 154  Q
    |||||||    
T  52458205 aagtgtc 52458199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 18713786 - 18713713
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| | ||| |||||||| ||||||||||    
T  18713786 agagtagtgatatatgtacaaccatttggaacaattttaatgacaactttcattctctctcttctcattggtcc 18713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 43388464 - 43388340
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatac 191  Q
    |||||||| |||||||||||   |||||||| |||||| |||||| ||||| |||||||| | ||| || |||||||||| |||||    |||||| |||    
T  43388464 agaaaaaaaatattttctatcatttacaattataataactatattttatttctcaaaagttttggcgaagcaaaattcaacttttttagttttttattac 43388365  T
Q  192 ccataatagtgaatattgattattt 216  Q
     ||||||||||||||||||||||||    
T  43388364 tcataatagtgaatattgattattt 43388340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 46948993 - 46948840
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaa-atatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||| | ||||||||| ||||||||||||| |||        | ||||| |||||||||||||  |||| |||| ||||||||||||| ||||| |    
T  46948993 ggtacacctacatattaaattaatagtttaatgaattattttttagaaaaaaatatatattttctatcagttataattataataattatattttatttct 46948894  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataata 199  Q
    |||||||||| |||||||||||||  ||||||| | ||||||| ||| |||||||    
T  46948893 caaaagtgtctgcaaatcaaaatt-taattttttttatttttattactcataata 46948840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 622347 - 622420
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||  |||||||||||  ||||||||| |||||||| |||||||||||||| ||||||||||    
T  622347 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 622420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 32621428 - 32621549
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| |||||| |||||| ||||| |||||||||||||| || ||||||||||| ||||  | |||||| ||| ||    
T  32621428 aaaaaaatattttctatcatttataattataataactatattttatttctcaaaagtgtcggcgaagcaaaattcaaaattttgaattttttattactca 32621527  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||| |||||| |||||||    
T  32621528 taatagtaaatatttattattt 32621549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 26669021 - 26668950
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||| | ||||||||  |||||||||||||    
T  26669021 agtagtgatatatgtacaaccatttaggacaactatgatgacaactttcattttctcatttttcattggtcc 26668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 462
Target Start/End: Complemental strand, 42424416 - 42424345
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||  |||||| ||||||    
T  42424416 aaagagtagtgatatatgtacatccatttggtacaactttgatgacaactttcatttattctcttctcattg 42424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 40159714 - 40159786
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||||||| |  ||||||||||||| |||||||    
T  40159714 agagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtc 40159786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 43176377 - 43176309
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    |||||||||||||| ||||||||||||  ||||||||||||| |||| |||||| ||||||||| ||||    
T  43176377 gagtagtgatatatatacaaccatttgatacaactttgatgataacttttatttgctctctttttattg 43176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 44334690 - 44334762
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||  |||||||||||  ||||||||| |||||| | |||||||||||||| ||||||||||    
T  44334690 gagtagtgatatattgacaaccatttgtgacaactttgttgacaatttttattttctctcttctcattggtcc 44334762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 35425559 - 35425629
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    ||||||||||||||||||| || ||||||| ||| |||||||||||||| | |||| ||||||| ||||||    
T  35425559 aagagtagtgatatatgtataatcatttggtacatctttgatgacaactttcatttgctctcttctcattg 35425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 46473312 - 46473239
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||| |||||| || |||||||||||  |||||||| |||||||||  | |||||||||||||||||||||    
T  46473312 aagagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtc 46473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 47509037 - 47509089
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattt 447  Q
    ||||||||||||||||||||||||||  |||||||||||||||| | ||||||    
T  47509037 agtagtgatatatgtacaaccatttgatacaactttgatgacaatttttattt 47509089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 28300535 - 28300606
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||| || |||||||| ||  |||||| |  |||||||| ||||||||||||||||||||||||    
T  28300535 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtc 28300606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 42104600 - 42104537
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||| ||||||| ||||||||||| || ||||||||| ||||||||| |||||| |||||||    
T  42104600 aagagttgtgatatttgtacaaccatatgtaacaactttaatgacaacttttatttactctctt 42104537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 51032512 - 51032586
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||||||||  |||   |||||||| ||||||||| | ||||||| |||||| |||||||    
T  51032512 aaagagtagtgatatatgtacaacttttttatacaactttcatgacaactttaattttctatcttttgattggtc 51032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 20380776 - 20380849
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||| || ||||||||||  |||||||||  ||||||||  | ||||||| |||||||||||||    
T  20380776 aagagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcattggtc 20380849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 7231894 - 7231966
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||| || |||||||||||  ||||||||  |||||| |  | |||||||||||||||||||||    
T  7231894 agagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcattggtc 7231966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 28300460 - 28300420
Alignment:
Q  390 caaagagtagtgatatatgtacaaccatttggaacaacttt 430  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  28300460 caaagagtagtgatatatgtacatccatttggtacaacttt 28300420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 37323841 - 37323777
Alignment:
Q  402 atatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||| |||||| |||||||||||||||| | | |||||||| ||| | ||||||||    
T  37323841 atatatgtacaactatttgggacaactttgatgacaattttcattttctcccttcttattggtcc 37323777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 11335191 - 11335262
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||  ||||| |||||||| || |||||| |  ||||||||| ||| |||||||    
T  11335191 gagtagtgatatatgtacaactctttggtacaacttttattacaactttagttttctctcatttgattggtc 11335262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 19608382 - 19608465
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttct 179  Q
    |||| |||||||||||   |||||||| ||||||  ||||| |||||||||||| ||| ||| || |||||||||| |||||||    
T  19608382 aaaaaatattttctatcatttacaattataataacaatattttatttttcaaaaatgttggcgaagcaaaattcaactttttct 19608465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 23920481 - 23920418
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctctt 455  Q
    |||||| ||||||| ||||||||||| || ||||||||| ||||||| | |||||| |||||||    
T  23920481 aagagttgtgatatttgtacaaccatatgtaacaactttaatgacaatttttatttactctctt 23920418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 52179271 - 52179149
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttct--aatttttaataccc 193  Q
    |||| |||||||||||   |||||||| ||||||  ||||| ||||| |||||| ||| ||| || |||||||||| ||||| |  | |||||| |||      
T  52179271 aaaaaatattttctatcatttacaattataataacaatattttatttctcaaaaatgttggcgaagcaaaattcaacttttttttaattttttattactt 52179172  T
Q  194 ataatagtgaatattgattattt 216  Q
    ||||||||||||||| |||||||    
T  52179171 ataatagtgaatatttattattt 52179149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 11173635 - 11173561
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||| | |||| || |||||||||||  ||||||||  ||||||||  | |||||||||||||||||||||    
T  11173635 aaagagtaataatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 11173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 29706085 - 29706015
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||| || ||||| |||||  ||||||||  ||||||||  | ||||||||||||||||||||    
T  29706085 gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggt 29706015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 41369760 - 41369690
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||||||    ||||| |||||||| ||||||||| |  ||||||||||||| |||||||    
T  41369760 agtagtgatatatgtacacttctttggtacaacttttatgacaactttagttttctctcttttgattggtc 41369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 55344181 - 55344255
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaac-tttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| ||||   ||||| ||| ||||||||| || ||||||||||||||||||||    
T  55344181 aaagagtagtgatatttgaacaactatttcatacaacattttatgacaacttttcttttctctcttttcattggt 55344255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 3484928 - 3484891
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaacttt 430  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  3484928 agagtagtgatatatgtacaaccatttgtgacaacttt 3484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 4208115 - 4208184
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcatt 461  Q
    |||||||||||||||||||||||||| ||  |||| |||  |||||||| | ||||||| |||| |||||    
T  4208115 aagagtagtgatatatgtacaaccatctgtgacaattttattgacaactttcattttctttcttctcatt 4208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 50745545 - 50745472
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||| |||||||||||||  ||||| |||||||  ||||||||| | ||| |||||| ||| ||||||    
T  50745545 aaagagtagtaatatatgtacaactctttggtacaacttctatgacaactttaattgtctctcatttgattggt 50745472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 7e-52; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 36053984 - 36054155
Alignment:
Q  47 gtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttca 146  Q
    |||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||    
T  36053984 gtacacccatatgttaaatgaatagtttaatgagttattttttttagaaaaaatatattttctattggttacaattataataattatattttatttctca 36054083  T
Q  147 aaagtgtcggcaaatcaaaattcaa--atttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||||| ||||||||||||||||    
T  36054084 aaagtgtcggcaaatcaaaattcaattttttttttaatttttaatacccataataatgaatattgattattt 36054155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 36 - 216
Target Start/End: Complemental strand, 41516211 - 41516029
Alignment:
Q  36 caatttttatggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaata--tattttctattggttacaattgtaataattat 133  Q
    |||||| ||||||||| |||||| |||||| |||||||||||||||||        | |||||| |  |||||||||||||||| |||| ||||||||||    
T  41516211 caatttctatggtacatccatatgttaaatgaatagtttaatgagttattttttttaaaaaaaaaaaatattttctattggttataattataataattat 41516112  T
Q  134 attatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41516111 attttatttctcaaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatacccataatagtgaatattgattattt 41516029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 29943595 - 29943766
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagt-tannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatattttt 144  Q
    |||||||||||||||||||| ||||||||||||| | |         ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  29943595 ggtacacccatatattaaatgaatagtttaatgaatatttttttcttagaaaaaatatattttctattagttacaattataataattatattttattttt 29943694  T
Q  145 caaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  29943695 caaaagtgtcggcaaatcaaaattcaaatttttttaatttttaatactcatattattgaatattgattattt 29943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 6279858 - 6279732
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaat 189  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||    
T  6279858 agaaaaaatatattttttattggttacaattataataattatattttatttctcaaaagtgtcggcaaatcaaaattcaattttttttttaatttttaat 6279759  T
Q  190 acccataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||||||    
T  6279758 acccataatagtgaatattgattattt 6279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 2639954 - 2640125
Alignment:
Q  46 ggtacacccatatattaaataaatagtttaatgagttannnnnnnnagaaaaaatatattttctattggttacaattgtaataattatattatatttttc 145  Q
    ||||||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  2639954 ggtacacccatatgttaaatgaatagtttaatgagttattttttt-agaaaaaatatattttctattggttacaattataataattatattttatttctc 2640052  T
Q  146 aaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaatac----ccataatagtgaatattgatt 212  Q
    ||||||||||||||||||||||||||   ||||| |||||||||||||    |||||||||||||||||||||    
T  2640053 aaaagtgtcggcaaatcaaaattcaattttttttttaatttttaatacccatccataatagtgaatattgatt 2640125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 39307098 - 39307220
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |    
T  39307098 aaaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactc 39307197  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||||||||||||||||||||    
T  39307198 ataatagtgaatattgattattt 39307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 325542 - 325663
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  325542 aaaaaaatattttctatcatttataattataataattttattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 325641  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  325642 taatagtgaatattgattattt 325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 36430931 - 36430810
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||| ||| ||    
T  36430931 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttaaaatttttattactca 36430832  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  36430831 taatagtgaatattgattattt 36430810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 44544133 - 44544254
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||| ||| ||    
T  44544133 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaattttttttaatttttattactca 44544232  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  44544233 taatagtgaatattgattattt 44544254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 3911315 - 3911435
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||| ||    
T  3911315 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaatttaaattttt-taatttttattactca 3911413  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  3911414 taatagtgaatattgattattt 3911435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 13118904 - 13119025
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||| ||    
T  13118904 aaaaaaatattttctatcatttataattataataattttattttatttttcaaaagtgtcggcaaagcaaaattcaaaattttttaatttttattactca 13119003  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  13119004 taatagtgaatattgattattt 13119025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 36023699 - 36023796
Alignment:
Q  119 aattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccataatagtgaatattgattattt 216  Q
    |||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  36023699 aattataataatcatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactcataatagtgaatattgattattt 36023796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 13507571 - 13507451
Alignment:
Q  94 aaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccc 193  Q
    |||||| |||||||||||   |||||||| |||  |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| |    
T  13507571 aaaaaaaatattttctatcaattacaattataa--attatattttatttttcaaaagtgtcggcaaatcaaaattcaattttttttaatttttattactc 13507474  T
Q  194 ataatagtgaatattgattattt 216  Q
    |||||| ||||||| ||||||||    
T  13507473 ataataatgaatatcgattattt 13507451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 15354538 - 15354664
Alignment:
Q  92 agaaaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa--atttttctaatttttaat 189  Q
    |||| ||| |||||||||||   |||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||   ||||| |  |||||| |    
T  15354538 agaataaaaatattttctatcatttacaattataataactatattttatttttcaaaagtgtcggcaaagcaaaattcaactttttttgttttttttatt 15354637  T
Q  190 acccataatagtgaatattgattattt 216  Q
    || ||||||||||||||||||||||||    
T  15354638 actcataatagtgaatattgattattt 15354664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 42665700 - 42665773
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| | |||| |||| |||||||||||||    
T  42665700 agagtagtgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttcattggtcc 42665773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 546273 - 546346
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||  |||||||||||  ||||||||| |||||||| |||||||||||||| ||||||||||    
T  546273 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtcc 546346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 5155981 - 5155889
Alignment:
Q  126 ataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaatacccata--atagtgaatattgattattt 216  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||  |||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  5155981 ataattatattgtatttatcaaaagtgtccgcaaatcaaaattcaatgtttttttatttttattactcataatatagtgaatattgattattt 5155889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 7497878 - 7497950
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||||| |||||||||||||| ||||||||    
T  7497878 aagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggt 7497950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 10389401 - 10389329
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||| | | |||||||||| ||||||||||    
T  10389401 gagtagtgatatatgtacaaccatttgggacaactttggtgacgactttcactttctctcttctcattggtcc 10389329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 11442854 - 11442782
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||| | ||||  |||||||||||||||||    
T  11442854 gagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttttcattggtcc 11442782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 42554957 - 42554898
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctct 452  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||||| | |||||||||    
T  42554957 agagtagtgatataagtacaaccatttggtacaactttgataacaactttcattttctct 42554898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 394 - 463
Target Start/End: Original strand, 2308213 - 2308282
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattgg 463  Q
    |||||||||||| ||||||||||| |   |||||||||||||||||| | |||||||||||| |||||||    
T  2308213 gagtagtgatatttgtacaaccatatatgacaactttgatgacaactttcattttctctcttctcattgg 2308282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 22594826 - 22594947
Alignment:
Q  96 aaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaa-atttttctaatttttaataccca 194  Q
    |||| ||||||||||||  |||||||| ||||||  ||||| ||||| |||||| ||| ||| || ||||||||||  ||||| ||||||||| |||  |    
T  22594826 aaaaaatattttctattatttacaattataataacaatattttatttctcaaaaatgttggcgaagcaaaattcaacttttttttaatttttattactta 22594925  T
Q  195 taatagtgaatattgattattt 216  Q
    |||||||| ||||| |||||||    
T  22594926 taatagtgtatatttattattt 22594947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 35965764 - 35965694
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||||||||||||||   | ||||||||||| |||| ||| ||||||| || ||||||||    
T  35965764 gagtagtgatatatgtacaaccatttatgagaactttgatgataacttttactttctctattctcattggt 35965694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 13711246 - 13711173
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| |||| | ||||||||  ||||||||  | ||||||||||||||||||||    
T  13711246 aaagagtagtgatatttgaacaactattttgtacaacttttgtgacaacttcttttttctctcttttcattggt 13711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 42251807 - 42251880
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||| |  |||| |||||||||||||||   ||||||||  | |||||||||||||||||||||    
T  42251807 aagagtagtgatatttaaacaatcatttggaacaacttatgtgacaacttcttttttctctcttttcattggtc 42251880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 4723749 - 4723677
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||| |||||||||||||||||  ||||| |||||||| || |||||| |  ||||||||||||| |||||||    
T  4723749 agagcagtgatatatgtacaactctttggtacaacttttataacaactttagttttctctcttttgattggtc 4723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 19913968 - 19913896
Alignment:
Q  393 agagtagtgatatatgtacaaccatttggaacaacttt-gatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||| || ||||||||||   |||||||| | |||||||| || ||||||||||||||||||||    
T  19913968 agagtagtgatatttgaacaaccatttcatacaactttcggtgacaactttttttttctctcttttcattggt 19913896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 6666201 - 6666130
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||  | || ||||||  |||| |||| |||||||| |||||||||||||| ||||||||||    
T  6666201 agtagtgatatattgataatcatttgtgacaattttgttgacaacttttattttctctcttctcattggtcc 6666130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 36909732 - 36909803
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||| |||||| ||||||   |||||||||||||||||| |  ||||||||||| | |||||||    
T  36909732 gagtagtgatatttgtacatccatttcatacaactttgatgacaactttgtttttctctcttcttattggtc 36909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 3091926 - 3091852
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    ||||||||||||||| || ||||  |||||  ||||||||  ||||||||  | |||||||||||||||||||||    
T  3091926 aaagagtagtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtc 3091852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 36795911 - 36795841
Alignment:
Q  395 agtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||| ||||||||||||||| |||| | ||||||||||||| | || | ||||||||| |||| |||||||    
T  36795911 agtaatgatatatgtacaactatttaggacaactttgatgatagctttcattttctctttttttattggtc 36795841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 38912488 - 38912558
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattg 462  Q
    ||||||| |||||||||||||||||||||| |||||||| || | |||| | ||||  | |||||||||||    
T  38912488 aagagtaatgatatatgtacaaccatttggtacaactttaataataactttcatttgttttcttttcattg 38912558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 544 - 578
Target Start/End: Original strand, 42665851 - 42665885
Alignment:
Q  544 tgtaataaactgattgtacaaatatcatttctctt 578  Q
    ||||||||| |||||||||||||||||||||||||    
T  42665851 tgtaataaagtgattgtacaaatatcatttctctt 42665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 36133159 - 36133086
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    ||||||||||||||| || ||||| ||||   ||||||||  ||||||||  | ||||||||||||||||||||    
T  36133159 aaagagtagtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggt 36133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 8e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 263144 - 263023
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||    
T  263144 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaatttttttaatttttattactca 263045  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  263044 taatagtgaatattgattattt 263023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 6017 - 5896
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||| ||| ||    
T  6017 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcgaagcaaaattcaaatttttttaatttttattactca 5918  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  5917 taatagtgaatattgattattt 5896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 71011 - 70890
Alignment:
Q  95 aaaaatatattttctattggttacaattgtaataattatattatatttttcaaaagtgtcggcaaatcaaaattcaaatttttctaatttttaataccca 194  Q
    ||||| |||||||||||   ||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||| ||    
T  71011 aaaaaaatattttctatcatttataattataataattatattttatttttcaaaagtgtcggcaaagcaaaattcaaaattttttaatttttattactca 70912  T
Q  195 taatagtgaatattgattattt 216  Q
    ||||||||||||||||||||||    
T  70911 taatagtgaatattgattattt 70890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 8e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 156090 - 156016
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  156090 aagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttctctcttctcattggtcc 156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 4493 - 4425
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtc 465  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||    
T  4493 tagtgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggtc 4425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 29702 - 29771
Alignment:
Q  397 tagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||| ||| || || ||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  29702 tagtgatgtatatataatcatttgggacaactttgatgacaactttcattttctctcttttcattggtcc 29771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 16576 - 16501
Alignment:
Q  391 aaagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||||||  ||||||||||   ||||||||| |||||||| ||||||||||| || ||||||||||    
T  16576 aaagagtagtgatatattgacaaccatttatgacaactttgttgacaacttttattttctctattctcattggtcc 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 14436 - 14510
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||| | | ||||  |||||| ||||||||||    
T  14436 aagagtagtgatatatgtacatccatttggtacaactttgttgacaattttaatttgttctcttctcattggtcc 14510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 21469 - 21535
Alignment:
Q  400 tgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    |||||||||||||| ||||||  ||||||||||| |||||| | |||||||||||| ||||||||||    
T  21469 tgatatatgtacaatcatttgtgacaactttgataacaactttcattttctctcttctcattggtcc 21535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 464
Target Start/End: Complemental strand, 18187 - 18116
Alignment:
Q  392 aagagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggt 464  Q
    |||||||||||||| || ||||| |||||  |||||||| ||||||||| || ||||||||||||||||||||    
T  18187 aagagtagtgatatttgaacaactatttgatacaacttttatgacaact-tttttttctctcttttcattggt 18116  T

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Target: scaffold0111 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 36757 - 36829
Alignment:
Q  394 gagtagtgatatatgtacaaccatttggaacaactttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||| ||||||||  |||| |||||   ||||||||| |||||||| |||||||||||||| ||||||||||    
T  36757 gagtattgatatattgacaatcatttttgacaactttgttgacaacttttattttctctcttctcattggtcc 36829  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 428 - 466
Target Start/End: Complemental strand, 60615 - 60577
Alignment:
Q  428 tttgatgacaactcttattttctctcttttcattggtcc 466  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  60615 tttgatgacaactttcattttctctcttttcattggtcc 60577  T

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