View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5085_low_2 (Length: 356)
Name: NF5085_low_2
Description: NF5085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5085_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 9 - 338
Target Start/End: Original strand, 734844 - 735173
Alignment:
| Q |
9 |
gaagaatatacataccaaatataaagaaagcagcaatccaaccaccagtttttgaaagatcctcaatggattttccatgaatattaacaggtgtagaacc |
108 |
Q |
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| T |
734844 |
gaagaatatacataccaaatataaagaaagcagcaatccaaccaccagtttttgaaagatcctcaatggattttccatgaatattaacaggtgtagaacc |
734943 |
T |
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| Q |
109 |
tcttgtataacctcgccctaaagccatccttctatcctcagactcaatgaagaaaataccaagtttctttctgctcattgaagtgcatggtgtcccttgt |
208 |
Q |
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| T |
734944 |
tcttgtataacctcgccctaaagccatccttctatcctcagactcaatgaagaaaataccaagtttctttctgctcattgaagtgcatggtgtcccttgt |
735043 |
T |
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| Q |
209 |
tgaggtgcttctggtgacttgatctcacaagtatccattttactagctctaacacacaagagtgctagttagcacaaaaaactcacttttacatagaagg |
308 |
Q |
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| T |
735044 |
tgaggtgcttctggtgacttgatctcacaagtatccattttactagctctaacacacaagagtgctagatagcacaaaaaactcacttttacatagaagg |
735143 |
T |
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| Q |
309 |
gttcattacttcatttgctcacctactcat |
338 |
Q |
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| T |
735144 |
gttcattacttcatttgctcacctactcat |
735173 |
T |
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