View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5086_high_21 (Length: 337)
Name: NF5086_high_21
Description: NF5086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5086_high_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 17 - 337
Target Start/End: Complemental strand, 7088758 - 7088438
Alignment:
| Q |
17 |
cattatcactttcacacaacaatttcagtggaactattagtccttcacttacactttccaacactcttcaaaaactaaaccttagtcacaactcattttc |
116 |
Q |
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| T |
7088758 |
cattatcactttcacacaacaatttcagtggaactattagtccttcacttacactttccaacactcttcaaaaactaaaccttagtcacaactcattttc |
7088659 |
T |
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| Q |
117 |
tggtccattacctctttcttttgtcaacattagttcaataaggttcatcgatctctcgcataattcattcacgggacaaatgcctgatagtttctttgag |
216 |
Q |
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| T |
7088658 |
tggtccattacctctttcttttgtcaacatgagttcaataaggttcattgatctctcgcataattcgttcgcgggacaaatgcctgatggtttcttcgag |
7088559 |
T |
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| Q |
217 |
aattgtttctcccttcgtcgcgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgatc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7088558 |
aattgtttctcccttcgtcgcgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgatc |
7088459 |
T |
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| Q |
317 |
tttcaaataatcattttagtg |
337 |
Q |
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| T |
7088458 |
tttcaaataatcattttagtg |
7088438 |
T |
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