View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5086_high_40 (Length: 231)

Name: NF5086_high_40
Description: NF5086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5086_high_40
NF5086_high_40
[»] chr8 (50 HSPs)
chr8 (29-213)||(43275455-43275639)
chr8 (29-213)||(30999580-30999763)
chr8 (1-213)||(40058359-40058582)
chr8 (29-213)||(40918787-40918971)
chr8 (29-213)||(11174279-11174465)
chr8 (29-213)||(2539986-2540173)
chr8 (29-213)||(7146948-7147134)
chr8 (29-213)||(11646381-11646567)
chr8 (29-213)||(3585486-3585672)
chr8 (29-213)||(37345606-37345792)
chr8 (32-213)||(36068118-36068301)
chr8 (29-213)||(27035032-27035216)
chr8 (53-213)||(20546349-20546505)
chr8 (52-213)||(13881011-13881174)
chr8 (55-213)||(35866675-35866834)
chr8 (42-193)||(28326734-28326883)
chr8 (136-213)||(27563923-27564000)
chr8 (90-211)||(26628874-26628997)
chr8 (52-213)||(28562479-28562642)
chr8 (29-213)||(28567954-28568139)
chr8 (29-213)||(28575547-28575732)
chr8 (52-197)||(39151464-39151607)
chr8 (113-211)||(45400828-45400927)
chr8 (52-213)||(30906745-30906909)
chr8 (93-210)||(11163305-11163422)
chr8 (93-210)||(12248854-12248971)
chr8 (93-210)||(43553078-43553195)
chr8 (93-210)||(3720719-3720836)
chr8 (93-209)||(12763474-12763590)
chr8 (52-98)||(26629182-26629228)
chr8 (93-210)||(167561-167678)
chr8 (156-213)||(10180924-10180981)
chr8 (93-210)||(14061233-14061350)
chr8 (93-210)||(23429948-23430065)
chr8 (42-131)||(37510314-37510405)
chr8 (93-208)||(26740221-26740336)
chr8 (93-211)||(27911756-27911874)
chr8 (93-211)||(27958175-27958293)
chr8 (93-210)||(14228406-14228522)
chr8 (93-210)||(17718542-17718659)
chr8 (181-210)||(32010256-32010285)
chr8 (159-204)||(33751245-33751290)
chr8 (93-210)||(33935144-33935261)
chr8 (93-210)||(34046890-34047007)
chr8 (93-210)||(35052092-35052209)
chr8 (93-210)||(38482876-38482993)
chr8 (137-210)||(45281505-45281578)
chr8 (53-128)||(10180998-10181074)
chr8 (134-210)||(11707610-11707686)
chr8 (93-209)||(23855598-23855713)
[»] chr7 (38 HSPs)
chr7 (29-213)||(10981543-10981729)
chr7 (29-213)||(25614409-25614593)
chr7 (1-213)||(27813809-27814032)
chr7 (29-213)||(36453180-36453366)
chr7 (29-213)||(47110486-47110671)
chr7 (29-213)||(40348995-40349183)
chr7 (53-213)||(16662155-16662314)
chr7 (53-213)||(17636515-17636674)
chr7 (42-213)||(3091565-3091734)
chr7 (52-213)||(16360442-16360598)
chr7 (52-211)||(3498813-3498973)
chr7 (140-213)||(27941040-27941113)
chr7 (52-211)||(7743456-7743615)
chr7 (93-208)||(33257922-33258037)
chr7 (93-210)||(46563210-46563327)
chr7 (93-210)||(8965987-8966104)
chr7 (136-213)||(24456821-24456898)
chr7 (54-132)||(27942176-27942256)
chr7 (60-204)||(27021566-27021710)
chr7 (110-206)||(31815172-31815268)
chr7 (136-211)||(8380082-8380157)
chr7 (154-204)||(6737252-6737302)
chr7 (52-129)||(37983214-37983289)
chr7 (89-210)||(3177969-3178090)
chr7 (93-210)||(26803517-26803634)
chr7 (83-120)||(28200298-28200335)
chr7 (93-210)||(35112468-35112585)
chr7 (110-210)||(42841970-42842070)
chr7 (93-204)||(18194301-18194412)
chr7 (156-211)||(41480639-41480694)
chr7 (144-210)||(24283621-24283687)
chr7 (93-210)||(12838165-12838282)
chr7 (93-210)||(26723963-26724080)
chr7 (89-162)||(30586759-30586832)
chr7 (114-210)||(6799162-6799258)
chr7 (102-210)||(18470346-18470454)
chr7 (89-153)||(32049509-32049573)
chr7 (134-210)||(33173846-33173922)
[»] chr3 (57 HSPs)
chr3 (29-213)||(36881317-36881501)
chr3 (29-213)||(13364878-13365064)
chr3 (29-213)||(23087987-23088173)
chr3 (29-213)||(46694166-46694352)
chr3 (29-213)||(3383111-3383297)
chr3 (29-211)||(198890-199074)
chr3 (30-213)||(19241724-19241909)
chr3 (29-213)||(43750172-43750357)
chr3 (29-213)||(29375173-29375353)
chr3 (85-208)||(27707050-27707172)
chr3 (83-213)||(18355924-18356053)
chr3 (115-213)||(13703338-13703433)
chr3 (53-208)||(37780996-37781152)
chr3 (89-213)||(52009106-52009229)
chr3 (90-213)||(48436325-48436445)
chr3 (94-197)||(48963223-48963324)
chr3 (115-213)||(31873919-31874015)
chr3 (129-213)||(32835045-32835129)
chr3 (52-213)||(53559667-53559829)
chr3 (89-211)||(54086651-54086771)
chr3 (89-193)||(46188863-46188967)
chr3 (29-113)||(13702804-13702890)
chr3 (52-213)||(1455207-1455367)
chr3 (53-210)||(24064283-24064438)
chr3 (89-210)||(23771326-23771447)
chr3 (160-213)||(48820508-48820561)
chr3 (29-89)||(32835138-32835198)
chr3 (83-213)||(6901655-6901782)
chr3 (53-213)||(52805083-52805244)
chr3 (52-205)||(19896994-19897146)
chr3 (93-210)||(48152024-48152141)
chr3 (42-144)||(26105079-26105183)
chr3 (134-210)||(32980679-32980755)
chr3 (110-210)||(43159867-43159967)
chr3 (43-79)||(48820444-48820480)
chr3 (29-72)||(27707363-27707406)
chr3 (119-210)||(48214106-48214197)
chr3 (109-193)||(40228280-40228361)
chr3 (93-210)||(3643286-3643402)
chr3 (93-210)||(33874636-33874753)
chr3 (134-213)||(37293553-37293629)
chr3 (93-210)||(43775480-43775597)
chr3 (52-120)||(44522499-44522567)
chr3 (164-212)||(51584442-51584490)
chr3 (93-205)||(55141566-55141678)
chr3 (111-210)||(52173786-52173885)
chr3 (164-210)||(2154200-2154246)
chr3 (83-121)||(17755246-17755284)
chr3 (83-121)||(19056566-19056604)
chr3 (93-210)||(24154-24271)
chr3 (93-210)||(27039696-27039813)
chr3 (93-210)||(32854038-32854155)
chr3 (109-204)||(44522587-44522679)
chr3 (93-210)||(54106302-54106419)
chr3 (134-210)||(27028146-27028222)
chr3 (110-210)||(47104262-47104362)
chr3 (174-210)||(51219255-51219291)
[»] chr1 (43 HSPs)
chr1 (29-213)||(321661-321847)
chr1 (29-213)||(47037908-47038092)
chr1 (29-213)||(23045335-23045521)
chr1 (29-213)||(40783713-40783899)
chr1 (29-213)||(284368-284554)
chr1 (29-213)||(23526275-23526460)
chr1 (29-210)||(33082780-33082962)
chr1 (29-213)||(27211011-27211206)
chr1 (29-210)||(24771965-24772147)
chr1 (29-213)||(46771672-46771859)
chr1 (53-211)||(18396754-18396913)
chr1 (52-213)||(1837884-1838046)
chr1 (52-202)||(27143079-27143231)
chr1 (42-213)||(34458780-34458950)
chr1 (29-153)||(52037241-52037362)
chr1 (42-213)||(31003843-31004012)
chr1 (42-197)||(52478016-52478170)
chr1 (42-213)||(40261341-40261501)
chr1 (42-197)||(3657125-3657279)
chr1 (116-213)||(40562342-40562437)
chr1 (52-211)||(51064812-51064975)
chr1 (52-140)||(1749365-1749455)
chr1 (62-213)||(24876633-24876782)
chr1 (62-213)||(31061515-31061662)
chr1 (136-213)||(40052520-40052597)
chr1 (53-170)||(7765072-7765186)
chr1 (42-161)||(14351869-14351989)
chr1 (53-121)||(25929173-25929241)
chr1 (115-206)||(23166914-23167004)
chr1 (97-207)||(32348020-32348130)
chr1 (93-211)||(9127705-9127825)
chr1 (93-210)||(18033907-18034024)
chr1 (93-210)||(35700456-35700573)
chr1 (54-117)||(40562733-40562797)
chr1 (138-202)||(49756678-49756742)
chr1 (134-211)||(19455521-19455598)
chr1 (92-209)||(25577582-25577699)
chr1 (142-215)||(25929248-25929321)
chr1 (93-210)||(38597630-38597747)
chr1 (89-153)||(2572067-2572131)
chr1 (138-213)||(14925610-14925683)
chr1 (102-210)||(20605714-20605822)
chr1 (110-210)||(51613450-51613550)
[»] chr6 (37 HSPs)
chr6 (29-213)||(1605614-1605799)
chr6 (29-213)||(8626517-8626703)
chr6 (29-211)||(30734541-30734725)
chr6 (29-213)||(13757243-13757428)
chr6 (29-213)||(29260227-29260413)
chr6 (29-211)||(7761336-7761519)
chr6 (29-213)||(31559794-31559978)
chr6 (49-213)||(4129482-4129647)
chr6 (1-213)||(15064751-15064973)
chr6 (29-213)||(8235659-8235846)
chr6 (29-213)||(17942478-17942664)
chr6 (43-195)||(14287038-14287190)
chr6 (29-107)||(30734772-30734850)
chr6 (52-213)||(26860827-26860985)
chr6 (101-213)||(20398294-20398407)
chr6 (42-213)||(3798151-3798320)
chr6 (93-210)||(31244834-31244951)
chr6 (145-213)||(847832-847900)
chr6 (93-208)||(23777337-23777452)
chr6 (52-129)||(21277574-21277652)
chr6 (93-209)||(17251341-17251457)
chr6 (94-210)||(19811995-19812111)
chr6 (163-204)||(879309-879350)
chr6 (93-210)||(9838207-9838324)
chr6 (93-210)||(22784753-22784870)
chr6 (134-211)||(26470849-26470926)
chr6 (93-210)||(30237017-30237134)
chr6 (52-97)||(33845457-33845502)
chr6 (110-210)||(7170191-7170291)
chr6 (110-210)||(24356156-24356256)
chr6 (134-210)||(24948282-24948358)
chr6 (93-162)||(11000894-11000963)
chr6 (93-210)||(33260739-33260856)
chr6 (134-210)||(52702-52778)
chr6 (161-213)||(1814762-1814814)
chr6 (108-208)||(3621631-3621731)
chr6 (134-210)||(22050088-22050163)
[»] chr4 (55 HSPs)
chr4 (29-213)||(24706303-24706489)
chr4 (29-213)||(12071596-12071781)
chr4 (29-213)||(22321324-22321509)
chr4 (29-213)||(25704686-25704872)
chr4 (29-213)||(14261079-14261265)
chr4 (29-213)||(44568872-44569058)
chr4 (29-213)||(21310460-21310642)
chr4 (29-213)||(40122543-40122727)
chr4 (29-208)||(21661596-21661777)
chr4 (29-208)||(21670360-21670541)
chr4 (29-211)||(50767899-50768081)
chr4 (29-197)||(34324655-34324825)
chr4 (31-210)||(20249073-20249252)
chr4 (29-213)||(31892273-31892453)
chr4 (66-205)||(21064834-21064974)
chr4 (42-213)||(19692771-19692943)
chr4 (42-213)||(19703356-19703528)
chr4 (52-213)||(6129005-6129167)
chr4 (42-192)||(20714426-20714577)
chr4 (48-213)||(32543535-32543700)
chr4 (62-212)||(18507323-18507472)
chr4 (102-208)||(1146143-1146249)
chr4 (29-107)||(1988070-1988150)
chr4 (93-210)||(6150736-6150853)
chr4 (93-210)||(30939197-30939314)
chr4 (42-213)||(48652268-48652445)
chr4 (110-210)||(41955776-41955876)
chr4 (94-209)||(3802203-3802318)
chr4 (136-211)||(38617857-38617932)
chr4 (100-210)||(37551757-37551867)
chr4 (93-210)||(34603666-34603783)
chr4 (89-162)||(38865993-38866066)
chr4 (93-210)||(52057536-52057653)
chr4 (89-172)||(11034408-11034490)
chr4 (156-211)||(42629358-42629413)
chr4 (136-210)||(1615181-1615255)
chr4 (159-213)||(17038356-17038410)
chr4 (175-213)||(50839087-50839125)
chr4 (136-210)||(56576231-56576305)
chr4 (93-210)||(3436152-3436269)
chr4 (93-206)||(14090286-14090399)
chr4 (93-210)||(23719869-23719986)
chr4 (93-210)||(26933857-26933973)
chr4 (54-204)||(34284088-34284234)
chr4 (93-210)||(36750591-36750708)
chr4 (93-210)||(52677230-52677347)
chr4 (163-204)||(53219177-53219218)
chr4 (93-210)||(53599871-53599988)
chr4 (134-210)||(9220167-9220243)
chr4 (134-210)||(19527334-19527410)
chr4 (52-121)||(26676714-26676785)
chr4 (102-210)||(42513120-42513228)
chr4 (89-153)||(48509950-48510014)
chr4 (134-210)||(53691780-53691856)
chr4 (134-210)||(55147187-55147263)
[»] chr5 (45 HSPs)
chr5 (29-213)||(25773684-25773870)
chr5 (29-213)||(40886666-40886852)
chr5 (29-213)||(12806909-12807095)
chr5 (29-213)||(30720548-30720734)
chr5 (29-213)||(10285114-10285299)
chr5 (31-213)||(36561155-36561339)
chr5 (29-213)||(37900679-37900866)
chr5 (32-213)||(25683285-25683467)
chr5 (29-206)||(7277486-7277664)
chr5 (53-211)||(16054173-16054330)
chr5 (29-213)||(16983293-16983478)
chr5 (42-213)||(30403018-30403191)
chr5 (52-213)||(734395-734556)
chr5 (52-213)||(39070941-39071103)
chr5 (111-213)||(23097780-23097880)
chr5 (110-213)||(11797663-11797767)
chr5 (89-208)||(11319656-11319772)
chr5 (96-213)||(15629239-15629357)
chr5 (93-210)||(18393052-18393169)
chr5 (136-208)||(1056684-1056756)
chr5 (48-117)||(23098386-23098457)
chr5 (94-210)||(25785928-25786044)
chr5 (54-152)||(1056402-1056498)
chr5 (155-204)||(12305687-12305736)
chr5 (93-210)||(39893890-39894007)
chr5 (110-210)||(12784540-12784640)
chr5 (96-210)||(4609045-4609159)
chr5 (93-211)||(7466202-7466320)
chr5 (93-210)||(4175561-4175678)
chr5 (93-210)||(4985256-4985373)
chr5 (110-211)||(12723057-12723158)
chr5 (93-210)||(32389007-32389124)
chr5 (93-211)||(7408351-7408469)
chr5 (87-208)||(19831617-19831736)
chr5 (136-210)||(21150513-21150587)
chr5 (136-210)||(21157654-21157728)
chr5 (134-204)||(33239347-33239417)
chr5 (93-210)||(9076092-9076209)
chr5 (93-210)||(18437404-18437521)
chr5 (134-207)||(18465725-18465798)
chr5 (174-210)||(1297900-1297936)
chr5 (160-208)||(11795344-11795392)
chr5 (134-210)||(36239479-36239555)
chr5 (134-210)||(37809780-37809856)
chr5 (174-210)||(42911571-42911607)
[»] chr2 (46 HSPs)
chr2 (29-213)||(23366824-23367010)
chr2 (29-213)||(39938205-39938391)
chr2 (1-213)||(3518906-3519128)
chr2 (29-213)||(1646324-1646508)
chr2 (29-209)||(1102538-1102718)
chr2 (29-213)||(37673799-37673979)
chr2 (29-210)||(12969799-12969981)
chr2 (71-213)||(22388194-22388335)
chr2 (52-215)||(39561944-39562104)
chr2 (69-213)||(4917839-4917982)
chr2 (53-213)||(14779838-14779996)
chr2 (42-213)||(19976380-19976549)
chr2 (52-213)||(1002787-1002949)
chr2 (57-209)||(34242040-34242191)
chr2 (144-213)||(28110151-28110220)
chr2 (136-208)||(28401396-28401468)
chr2 (44-213)||(37284574-37284737)
chr2 (156-211)||(40756969-40757024)
chr2 (52-169)||(32840273-32840394)
chr2 (93-210)||(9370013-9370130)
chr2 (93-210)||(13753994-13754111)
chr2 (42-152)||(18078104-18078215)
chr2 (93-210)||(28967318-28967435)
chr2 (110-210)||(13849819-13849919)
chr2 (134-210)||(43077331-43077407)
chr2 (57-211)||(14117660-14117814)
chr2 (93-210)||(479060-479177)
chr2 (42-107)||(20668322-20668387)
chr2 (53-107)||(35179097-35179153)
chr2 (102-210)||(11222412-11222520)
chr2 (156-204)||(32323698-32323746)
chr2 (110-210)||(32854884-32854984)
chr2 (93-208)||(34399243-34399358)
chr2 (93-211)||(34357216-34357334)
chr2 (93-210)||(10812238-10812355)
chr2 (93-210)||(13000998-13001115)
chr2 (93-210)||(15893667-15893784)
chr2 (93-162)||(25787424-25787493)
chr2 (176-213)||(32838985-32839022)
chr2 (160-209)||(36447426-36447475)
chr2 (89-210)||(37077209-37077330)
chr2 (89-206)||(45065115-45065232)
chr2 (134-210)||(15677419-15677495)
chr2 (136-204)||(16021848-16021916)
chr2 (134-210)||(44360473-44360548)
chr2 (83-119)||(45397302-45397338)
[»] scaffold1770 (1 HSPs)
scaffold1770 (49-213)||(217-382)
[»] scaffold1431 (1 HSPs)
scaffold1431 (29-167)||(1-141)
[»] scaffold0062 (1 HSPs)
scaffold0062 (30-213)||(323-504)
[»] scaffold0054 (1 HSPs)
scaffold0054 (29-210)||(45489-45671)
[»] scaffold0025 (1 HSPs)
scaffold0025 (60-213)||(65221-65375)
[»] scaffold0168 (1 HSPs)
scaffold0168 (111-213)||(7788-7889)
[»] scaffold0003 (1 HSPs)
scaffold0003 (93-210)||(252633-252750)
[»] scaffold0343 (1 HSPs)
scaffold0343 (89-197)||(6972-7079)
[»] scaffold0076 (1 HSPs)
scaffold0076 (90-206)||(15386-15499)
[»] scaffold0036 (1 HSPs)
scaffold0036 (93-210)||(23175-23292)
[»] scaffold0006 (1 HSPs)
scaffold0006 (93-210)||(96146-96263)
[»] scaffold0236 (1 HSPs)
scaffold0236 (93-209)||(14335-14451)
[»] scaffold0056 (2 HSPs)
scaffold0056 (52-129)||(70882-70961)
scaffold0056 (134-213)||(71225-71304)
[»] scaffold0009 (1 HSPs)
scaffold0009 (134-210)||(147254-147330)
[»] scaffold0004 (1 HSPs)
scaffold0004 (145-213)||(234333-234399)
[»] scaffold0135 (1 HSPs)
scaffold0135 (134-210)||(30818-30894)
[»] scaffold0060 (1 HSPs)
scaffold0060 (103-213)||(10856-10963)
[»] scaffold0024 (1 HSPs)
scaffold0024 (134-210)||(49186-49262)


Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 43275639 - 43275455
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43275639 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttcattttat 43275540  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  43275539 ttttttctctctctacaataaatatgcaagggtattattgacaagataataattaatgttgcattgaaacttgaaagtgacaagt 43275455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 30999763 - 30999580
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30999763 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttcattttat 30999664  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  30999663 tttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtaacaagt 30999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40058582 - 40058359
Alignment:
Q  1 aatactccctccgtttcaaaatacgtgt---------agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt-- 89  Q
    |||||||||||||||||||||||| |||         |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||      
T  40058582 aatactccctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgt 40058483  T
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058482 tttctataatacccttaatcatttattatttcattttatttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 40058383  T
Q  190 cattgaaatttgaaagtgacaagt 213  Q
    |||||||| |||||||||||||||    
T  40058382 cattgaaacttgaaagtgacaagt 40058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 40918971 - 40918787
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  40918971 agaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaacatgtgtgttttctataatacccttaatcatttattatttcattttat 40918872  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40918871 ttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 40918787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 11174465 - 11174279
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  11174465 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 11174366  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11174365 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 11174279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 2540173 - 2539986
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  2540173 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 2540074  T
Q  127 atttttct-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2540073 attttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 2539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 7146948 - 7147134
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  7146948 agaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttttataatacccttaatcatttattatttcatttt 7147047  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7147048 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 7147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 11646567 - 11646381
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  11646567 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaatcatttattatttcatttt 11646468  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    | |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  11646467 acttttttctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagt 11646381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 3585486 - 3585672
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  3585486 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaatcatttattatttcatttt 3585585  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    | ||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  3585586 actttttcctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagt 3585672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 37345606 - 37345792
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  37345606 agaaattgcaccaaccaagaaaccaaataaattttgttatttttaatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 37345705  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  37345706 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaaatgacaagt 37345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 36068118 - 36068301
Alignment:
Q  32 aattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcattttatt 129  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||| |    
T  36068118 aattgtactaaccaaaaaaccaaataaattttgttatttttaatgaaaatatatgtgtgttttctataatacccttaatcattaattatttcattttact 36068217  T
Q  130 tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  36068218 tttttctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagt 36068301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 27035032 - 27035216
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt-tttctataatatccttaatcatttattatttcatttta 127  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||||||| ||||| ||| ||||||||||| |||||| |||||||||||||||| ||    
T  27035032 agaaattgcagtaaccaagaaaccaaataattttttttatttttgatgaaattatgtctgtgtttctataatacccttaaccatttattatttcattcta 27035131  T
Q  128 tttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27035132 ttttt-tctctctctacagtaaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 27035216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 20546505 - 20546349
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||  ||||||||||||||| ||||||| |||||    ||||||||||    
T  20546505 aaataaattttgttatttttgatgaaattatgtgtgttttatatgatacccttaacaatttattatttcattatatttttttctct----acaataaata 20546410  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20546409 tgtaagggtattattgacaagacaataattaatgttgcattgaaacctgaaagtgacaagt 20546349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 13881174 - 13881011
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt---ctataatatccttaatcatttattatttcattttatttttctctctctctacaata 148  Q
    |||||||||||||||||||||||||||| | |||| |||||   |||||||| ||||||||||||||||||||||| ||||  | |||||||||||||||    
T  13881174 caaataaattttgttatttttgatgaaattgtgtgcgtttttttctataatacccttaatcatttattatttcattatattagt-tctctctctacaata 13881076  T
Q  149 aatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||  | |||  ||||||| ||||  ||||||||||| ||||||||||| |||||||||||||||    
T  13881075 aattagtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagt 13881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 213
Target Start/End: Original strand, 35866675 - 35866834
Alignment:
Q  55 ataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    |||||| ||||||||||| |||||| | | ||||||||  |||||||| |||||| |||||||||||| ||| |||| || ||||||||||||||| |||    
T  35866675 ataaatgttgttatttttcatgaaattctttgtgttttttctataatacccttaaacatttattattttattctattatt-tctctctctacaatagata 35866773  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || ||| |||||||||| ||  ||||||||||||||| ||||||| |||||||||||||||    
T  35866774 tgtaagagtattattgataaaccaataattaatgttgaattgaaacttgaaagtgacaagt 35866834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 28326883 - 28326734
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctc 141  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||||  ||||||||||||||| |||| || ||||||||    
T  28326883 accaagaaatcaaataaattttgttatttttgatgaaattatgtgt-ttttcaataatactcttaactatttattatttcattctattatt-tctctctc 28326786  T
Q  142 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
     |||||||| |||||||  ||||||||||||  ||||||||| |||||||||    
T  28326785 cacaataaacatgcaagattattattgacaaaccaataattagtgttgcatt 28326734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 27564000 - 27563923
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  27564000 tctctctacaataaataggtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagt 27563923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 26628997 - 26628874
Alignment:
Q  90 tttctataatatcctta---atcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatg 186  Q
    ||||||||||| |||||   || ||||||||||||||| |||| || ||||||||||||||||||| | |||||||||||||| ||  ||||||||||||    
T  26628997 tttctataatacccttacccataatttattatttcattctattatt-tctctctctacaataaataggtaagggtattattgataaatcaataattaatg 26628899  T
Q  187 ttgcattgaaatttgaaagtgacaa 211  Q
    ||||||||||| |||||| ||||||    
T  26628898 ttgcattgaaacttgaaaatgacaa 26628874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 28562479 - 28562642
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt---ctataatatccttaatcatttattatttcattttatttttctctctctctacaata 148  Q
    ||||||||| |||| ||||||||||||| | | ||||||||   |||||||| ||||| |||||||| ||||||||  ||| || |||||||| | ||||    
T  28562479 caaataaatgttgtcatttttgatgaaattctttgtgtttttttctataatacccttactcatttatgatttcattcaattatt-tctctctcaaaaata 28562577  T
Q  149 aatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| | ||| ||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  28562578 aataggtaagagtaatattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagt 28562642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 28567954 - 28568139
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt---tttctataatatccttaatcatttattatttcattt 125  Q
    ||||||| |||  |||||| || ||||||||| |||| |||||| |||||| | | |||||   ||||||||||| |||   |||||||||||||||||     
T  28567954 agaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctataataccctgc-tcatttattatttcattc 28568052  T
Q  126 tatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||| || |||||||| |||||||||| | ||||||| |||||| ||  ||||||||||||||||||||||| || ||||||||||||    
T  28568053 aattatt-tctctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagt 28568139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 28575547 - 28575732
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt---tttctataatatccttaatcatttattatttcattt 125  Q
    ||||||| |||  |||||| || ||||||||| |||| |||||| |||||| | | |||||   ||||||||||| |||   |||||||||||||||||     
T  28575547 agaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctataataccctgc-tcatttattatttcattc 28575645  T
Q  126 tatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||| || |||||||| |||||||||| | ||||||| |||||| ||  ||||||||||||||||||||||| || ||||||||||||    
T  28575646 aattatt-tctctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagt 28575732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 39151464 - 39151607
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt-ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    |||||||| ||||||||||||||||||| ||||| | |||| |||||||||  || |||||||||||||| ||| |||| ||   ||||| |||||||||    
T  39151464 caaataaactttgttatttttgatgaaattatgtatttttttctataatataatttatcatttattattttattctattatt---tctctttacaataaa 39151560  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaa 197  Q
    || | ||| |||| |||||||||  ||||||||||||||| ||||||    
T  39151561 taggtaagagtatcattgacaagctaataattaatgttgccttgaaa 39151607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 45400927 - 45400828
Alignment:
Q  113 tattatttcattttattttt-ctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||||||||| ||||||| ||| |||||||||||||||| | |||  ||||||||| ||   ||||||||||||||||||||||||| ||||||||||    
T  45400927 tattatttcattatattttttctccctctctacaataaataagtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaa 45400828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 30906909 - 30906745
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt----ctataatatccttaatcatttattatttcattttatttttctctctctctacaat 147  Q
    ||||||||||||||||||||| |||||| | |||| |||||    |||| | | |||||| |||||||||||| ||| |||| || |||| | ||||||     
T  30906909 caaataaattttgttattttttatgaaattttgtgagttttttttctatgaaaaccttaaccatttattatttaattctattatt-tctcacactacaac 30906811  T
Q  148 aaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||| | |||| ||||||| ||||  ||||||||||| ||||||| |||||| ||||| ||||||    
T  30906810 aaataagtaaggatattattaacaattcaataattaatattgcattaaaatttaaaagtaacaagt 30906745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 11163422 - 11163305
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||| ||    
T  11163422 ctataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgtat 11163323  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  11163322 tgaactttgaaagtgaca 11163305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 12248854 - 12248971
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||||||||||||| | | ||| |||| |||||||||| |||||| || |||||  || |||| | ||||| ||||||    
T  12248854 ctataataaccttattcatttaatatttcattttatatatttctttctccacaataaataagcaaggataatattggtaaaacaacatttaatattgcat 12248953  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| || ||||||||||    
T  12248954 tgaacttcgaaagtgaca 12248971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 43553195 - 43553078
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||||||||| ||||||| |||||||||| || | | ||||||||  |||||||||   ||||||| |||||| || ||||   |||| |||||||    
T  43553195 ctataatatccttattcatttaatatttcatttcatatatttctctctccgcaataaataactaagggtaatattgataaaacaacgtttaaagttgcat 43553096  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  43553095 tgaactttgaaagtgaca 43553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 3720836 - 3720719
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| |||||||||| || | | ||||||||| ||||||||||   || ||| |||||  || |||| | ||||||||||||    
T  3720836 ctataatagccttattaatttaatatttcatttcatatgtttctctctctgcaataaatatcttagagtaatattggtaaaacaacatttaatgttgcat 3720737  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  3720736 tgaactttgaaagtgaca 3720719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 12763590 - 12763474
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||||| ||| ||||||| ||| |||||| || | | ||||||||  |||||||||   ||||||| |||||| || |||| | |||| |||||||    
T  12763590 ctataatatcattattcatttaatatctcatttcatatatttctctctccgcaataaataactaagggtaatattgataaaacaacatttaaagttgcat 12763491  T
Q  193 tgaaatttgaaagtgac 209  Q
    |||| ||||||||||||    
T  12763490 tgaactttgaaagtgac 12763474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 26629228 - 26629182
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataa 98  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  26629228 caaataaattttgttatgtttgatgaaattatgtgttttttctataa 26629182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 167561 - 167678
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| ||| ||||||||| | | | |||||| ||||||||||   |||| || |||||  || |||| | ||||||||||||    
T  167561 ctataataaccttattaatttaatatctcattttatatatttatctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcat 167660  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  167661 tgaactttgaaagtgaca 167678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 10180981 - 10180924
Alignment:
Q  156 aagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||||||||||    |||| |||||||||||||||| |||||||||||||||    
T  10180981 aagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagt 10180924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 14061233 - 14061350
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| | ||| ||||||| |||| |||||||||| | |||||||||  ||||||||   ||||| | |||||| || ||||   ||||||||||||    
T  14061233 ctataatagctttagtcatttaatattacattttatttatttctctctctgtaataaataactaagggcaatattgataaaacaacttttaatgttgcat 14061332  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||  |||||||||||||    
T  14061333 tgacctttgaaagtgaca 14061350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 23430065 - 23429948
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||| |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  23430065 ctataatgaccttattcatttaatatctcatttcatatatttctctctctgcaataaataactaaggataatattggtaaaacaacatttaatgttgcat 23429966  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  23429965 tgaactttgaaagtgaca 23429948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 37510314 - 37510405
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttct--ataatatccttaatcatttattatttcattttatttt 131  Q
    ||||| |||| |||||||||||||||||||| || ||| | | | | |||| |  |||||| ||||||||||||| ||||||||||||||||    
T  37510314 accaagaaactaaataaattttgttatttttaataaaattctttctattttttcaataatacccttaatcatttaatatttcattttatttt 37510405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 26740221 - 26740336
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| |||||||||| || | | ||| ||||  ||||||||||  ||||||| |||||  || |||| | ||||||||||||    
T  26740221 ctataatagccttattaatttaatatttcatttcatatgtttctttctccgcaataaatatctaagggtaatattggtaaaacaacatttaatgttgcat 26740320  T
Q  193 tgaaatttgaaagtga 208  Q
    |||| ||| |||||||    
T  26740321 tgaactttaaaagtga 26740336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 27911756 - 27911874
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| ||||||||||||| | | ||||||||  ||||||||||  ||||| | |||||  || |||| | ||||| ||||||    
T  27911756 ctataatggccttattaatttaatatttcattttatatgtttctctctccgcaataaatatctaagggcaatattggtaaaacaacatttaatattgcat 27911855  T
Q  193 tgaaatttgaaagtgacaa 211  Q
     ||| ||||||||||||||    
T  27911856 ggaactttgaaagtgacaa 27911874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 27958175 - 27958293
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| ||||||||||||| | | ||||||||  ||||||||||  ||||| | |||||  || |||| | ||||| ||||||    
T  27958175 ctataatggccttattaatttaatatttcattttatatgtttctctctccgcaataaatatctaagggcaatattggtaaaacaacatttaatattgcat 27958274  T
Q  193 tgaaatttgaaagtgacaa 211  Q
     ||| ||||||||||||||    
T  27958275 ggaactttgaaagtgacaa 27958293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 14228406 - 14228522
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| |||||||||| || | | ||||||||  |||||||||  ||||| || |||||  || |||| | ||||||||| ||    
T  14228406 ctataatgaccttattcatttaatatttcatttcatatatttctctctccgcaataaataa-caaggataatattggtaaaacaacatttaatgttgtat 14228504  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  14228505 tgaactttgaaagtgaca 14228522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 17718659 - 17718542
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||| ||||  ||||||||||  ||||||| |||||  || ||||   ||||||||||||    
T  17718659 ctataatggccttattaatttaatatttcatttcatatgtttctttctccgcaataaatatctaagggtaatattggtaaaacaacgtttaatgttgcat 17718560  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  17718559 tgaactttgaaagtgaca 17718542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 32010256 - 32010285
Alignment:
Q  181 ttaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||||||||||||||||||||||||    
T  32010256 ttaatgttgcattgaaatttgaaagtgaca 32010285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 33751290 - 33751245
Alignment:
Q  159 ggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    ||||||||||| || |||||||||||| |||||||||| |||||||    
T  33751290 ggtattattgataaaacaataattaatattgcattgaactttgaaa 33751245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 33935144 - 33935261
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||||| ||||||||||||    
T  33935144 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaatatttaatgttgcat 33935243  T
Q  193 tgaaatttgaaagtgaca 210  Q
    | || |||||||||||||    
T  33935244 taaactttgaaagtgaca 33935261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 34047007 - 34046890
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   ||||  | |||||  || |||||| ||||||||||||    
T  34047007 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggacaatattggtaaaacaatatttaatgttgcat 34046908  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  34046907 tgaactttgaaagtgaca 34046890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 35052209 - 35052092
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| ||| |||||| || | | |||||||| ||||||||||   |||| || |||||  || |||| | ||||||||||||    
T  35052209 ctataatgaccttatttatttaatatctcatttcatatatttctctctccacaataaataaataaggataatattggtaaaacaacatttaatgttgcat 35052110  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  35052109 tgaactttgaaagtgaca 35052092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 38482876 - 38482993
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  38482876 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcat 38482975  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  38482976 tgaactttgaaagtgaca 38482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 45281505 - 45281578
Alignment:
Q  137 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||| ||||||||||   |||| || ||||| ||| |||| | |||||||||||||||| |||||||||||||    
T  45281505 ctctccacaataaataactaaggataatattggcaaaacaacatttaatgttgcattgaactttgaaagtgaca 45281578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 10181074 - 10180998
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttct-ataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||||| || ||| || || |||||| | |||||| | |||| |||||||||||||||| |||    
T  10181074 aaataaattttgttattttttataaaattacgtttgtttttttataataccgttaaccatttattatttcattctat 10180998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 11707610 - 11707686
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  |||||||||   ||||||| |||||| || |||  | |||||||||||||||| |||||||||||||    
T  11707610 tctctctccgcaataaataattaagggtaatattgataaaacatcatttaatgttgcattgaactttgaaagtgaca 11707686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 23855713 - 23855598
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| ||| ||||||||| | | | |||||| ||||||||||   ||||||| |||||| || |||| | |||||||||||     
T  23855713 ctataataaccttatttatttaatatctcattttatatatttatctctccacaataaataactaagggtaatattgataa-acaacatttaatgttgcaa 23855615  T
Q  193 tgaaatttgaaagtgac 209  Q
    | || ||||||||||||    
T  23855614 taaactttgaaagtgac 23855598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 10981543 - 10981729
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  10981543 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 10981642  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10981643 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 10981729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 25614593 - 25614409
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  25614593 agaaattgcactaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctgaaatacccttaatcatttattatttcattttat 25614494  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  25614493 ttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaaagtgacaagt 25614409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 27813809 - 27814032
Alignment:
Q  1 aatactccctccgtttcaaaatacgtgt---------agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgt--gtgt 89  Q
    |||||||||||||||||||||||| |||         |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||    
T  27813809 aatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtatgtgt 27813908  T
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27813909 tttctataatacccttaatcatttattatttcattttatttttttctctctctacaataaatatgcaagggtattattgacaacacaataattaatgttg 27814008  T
Q  190 cattgaaatttgaaagtgacaagt 213  Q
    |||||||| |||||||||||||||    
T  27814009 cattgaaacttgaaagtgacaagt 27814032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 36453366 - 36453180
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  36453366 agaaattgcactaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgttttttctataatacccttaatcatttattatttcatttt 36453267  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36453266 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 36453180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 47110486 - 47110671
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcatttta- 127  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||     
T  47110486 agaaattgcactaaccaagaaacaaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattattttattttat 47110585  T
Q  128 tttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47110586 tttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 47110671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 40348995 - 40349183
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  40348995 agaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 40349094  T
Q  127 atttttctc--tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||||||||||    
T  40349095 atttttctctctctctctacaataaatatgcaagggtattattgaccaaacaataattaatgttgcattgaaacttaaaagtgacaagt 40349183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 16662155 - 16662314
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||||||||| ||| |||| || ||||| |||||||||||||    
T  16662155 aaataaattttgttatttttgatgaaaatttgtgttttttttataatacccttaaccatttattattttattatattctt-tctctatctacaataaata 16662253  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     | |||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||    
T  16662254 ggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagt 16662314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 17636515 - 17636674
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||||||||| ||| |||| || ||||| |||||||||||||    
T  17636515 aaataaattttgttatttttgatgaaaatttgtgttttttttataatacccttaaccatttattattttattatattctt-tctctatctacaataaata 17636613  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     | |||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||    
T  17636614 ggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagt 17636674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 3091565 - 3091734
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| |||||||||||||||||||||||||||| | | ||||||||  |||||||| |||||| |||||||||||||||| ||| ||||||        
T  3091565 accaaaaaatcaaataaattttgttatttttgatgaaattctttgtgttttttctataatacccttaaccatttattatttcattctatatttctc---- 3091660  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||| |||||||||||||||||  ||||| ||||||||||||||||| || ||| ||||||||    
T  3091661 tctacaataaatatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagt 3091734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 16360442 - 16360598
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaat 151  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||| |||||| ||||||||||||| || |||| || |||||| |||||| ||||    
T  16360442 caaataaattttgttatttttgatgaaattctgtgttttttctataatacccttaaccatttattatttc-ttctattatt-tctctccctacaaaaaat 16360539  T
Q  152 atgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||  |||   | |||||||||  ||||| ||||||||| ||||||| |||||||||||||||    
T  16360540 ataaaag---agtattgacaaaccaatatttaatgttgtattgaaacttgaaagtgacaagt 16360598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 3498973 - 3498813
Alignment:
Q  52 caaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    ||||| ||||||||||||||| ||||||   | ||| | ||||||||||||   |||| |||||||||||||||||||||||| ||||||| || |||||    
T  3498973 caaattaattttgttattttttatgaaattttttgtatcttttctataatacttttaaccatttattatttcattttattttt-tctctctttaaaataa 3498875  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||| ||| ||||||| || ||  ||||||||||| ||||||||||| ||||| |||||||    
T  3498874 atatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 27941113 - 27941040
Alignment:
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  27941113 tctacaataaataagtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagt 27941040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 7743615 - 7743456
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgt-tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||| | ||||| |||||||||||||||  ||| || | |||||||||||||||    
T  7743615 caaataaattttgttatttttgatgaaattatgtgtttctttctataataccgttaattatttattatttcattcaattatt-tatctctctacaataaa 7743517  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||    | |||||| ||| ||  ||||||||||  ||||||||||| || ||| ||||||    
T  7743516 tatatctgagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaa 7743456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 33258037 - 33257922
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| ||||||||| | | |||||||| | ||||||||  |||||||| |||||  || |||| | ||||||||||||    
T  33258037 ctataataaccttattcatttaatatctcattttatatatttctctctccataataaataaccaagggtaatattggtaaaacaacatttaatgttgcat 33257938  T
Q  193 tgaaatttgaaagtga 208  Q
    |||| |||||||||||    
T  33257937 tgaactttgaaagtga 33257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 46563210 - 46563327
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||  ||||||| ||| |||||| || | | |||||||||||||||||||  |||||||| || || ||| |||||| ||||||||| |     
T  46563210 ctataataaccttcctcatttaatatctcatttcatatatttctctctctacaataaataatcaagggtaataatgtcaaaacaatatttaatgttgtac 46563309  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  46563310 tgaactttgaaagtgaca 46563327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 8965987 - 8966104
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| | |||| || | | |||||||||||||||||||  |||||||| ||  |  || |||||  ||||||||||||    
T  8965987 ctataataaccttcatcatttaatatcttatttcatgtatttctctctctacaataaataatcaagggtaataaaggtaaaacaatgtttaatgttgcat 8966086  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  8966087 tgaactttgaaagtgaca 8966104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 24456898 - 24456821
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| ||| |||||||||||||||| ||   | || ||||||||||||||||| |||| ||||||||||    
T  24456898 tctctctacaatacataggcaagggtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagt 24456821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 27942256 - 27942176
Alignment:
Q  54 aataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttattttt 132  Q
    |||||||||| |||||||| |||| | ||||||||||||  |||||||| | |||| |||||||||||||||| |||||||    
T  27942256 aataaatttttttatttttaatgagattatgtgtgttttttctataatacctttaaccatttattatttcattctattttt 27942176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 27021566 - 27021710
Alignment:
Q  60 ttttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagg 159  Q
    |||||||| ||||||||||| ||||| | |||||||||||| ||||||| |||||||||   |||| || | |   |||||   |||||||||   |||     
T  27021566 ttttgttacttttgatgaaactatgtcttttttctataataaccttaattatttattatccaatttcatctattgttctcttagcaataaatagtgaagt 27021665  T
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||| ||||  ||||||||||||||||||| || |||||||    
T  27021666 gtattatttacaaatcaataattaatgttgcattcaactttgaaa 27021710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 31815172 - 31815268
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagt 206  Q
    ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||  || |||||| |||||||||||||||| |||||||||    
T  31815172 atttaatatttcatttcatatgtttctctctccgcaataaatatctaagggtaatattggtaaaacaatatttaatgttgcattgaattttgaaagt 31815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 8380082 - 8380157
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||||||||||||||| | ||||||||| || ||||  |||||| |||||||| ||||||| || ||||||||||    
T  8380082 tctctctacaataaataagtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaa 8380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 6737252 - 6737302
Alignment:
Q  154 gcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||    
T  6737252 gcaagggtattattgataaaacaataattaatattgcattgaactttgaaa 6737302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 37983214 - 37983289
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatt 129  Q
    ||||||||||||||||||||||||||||   | | |||||| ||||||| | |||| |||||||||||||||| ||||    
T  37983214 caaataaattttgttatttttgatgaaa--ttttatgttttttataatacctttaaccatttattatttcattatatt 37983289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 3178090 - 3177969
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| ||||  ||||||| ||| || ||| || | | ||||||||| |||||||||  |||||||| ||  | ||| |||| | ||||||||    
T  3178090 ttttctataataaccttcgtcatttaatatatcttttcatatatttctctctctgcaataaataaccaagggtaataacggcaaaacaacatttaatgtt 3177991  T
Q  189 gcattgaaatttgaaagtgaca 210  Q
    | |||||| |||||||||||||    
T  3177990 gtattgaactttgaaagtgaca 3177969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 26803517 - 26803634
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| ||||||||| | | ||||||||||| |||||||  |||||||| ||  |  || |||||| ||||||||| ||    
T  26803517 ctataataaccttcatcatttaatatctcattttatatatttctctctctacgataaataatcaagggtaataaggggaaaacaatatttaatgttgtat 26803616  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| ||| |||| ||||    
T  26803617 tgaactttaaaagcgaca 26803634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 28200298 - 28200335
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattattt 120  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  28200298 tgtgttttttctataatatccttaatcatttattattt 28200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 35112585 - 35112468
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| | ||| | ||||| ||| ||||||||| | | | |||||| ||||||||||   ||||||| |||||  || |||||| |||||||||||     
T  35112585 ctataataactttatttatttaatatctcattttatatatttttctctccacaataaataactaagggtaatattggtaaaacaatatttaatgttgcaa 35112486  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  35112485 tgaactttgaaagtgaca 35112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 42841970 - 42842070
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||| || | || | |||||| ||||||||| ||||||||||||    
T  42841970 atttaatatttcatttcatatgtttctctctccgcaataaatatctaagggtaatattgataaaataacatttaatgatgcattgaactttgaaagtgac 42842069  T
Q  210 a 210  Q
    |    
T  42842070 a 42842070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 18194301 - 18194412
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| | |||  || |||| | ||||| ||||||    
T  18194301 ctataatagccttattaatttaatatttcatttcatatgtttctctctccgcaataaatatataagggtaatgttggtaaaacaacatttaattttgcat 18194400  T
Q  193 tgaaatttgaaa 204  Q
    ||||||||||||    
T  18194401 tgaaatttgaaa 18194412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 41480639 - 41480694
Alignment:
Q  156 aagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||||||||||||||| |||||| ||||| |||||||||| ||| ||| ||||||    
T  41480639 aagggtattattgacaaaacaatagttaatattgcattgaactttcaaaatgacaa 41480694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 24283687 - 24283621
Alignment:
Q  144 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||||  ||||||| |||||| || |||  | |||||||||||||||| |||||||||||||    
T  24283687 caataaatatctaagggtaatattgataaaacatcatttaatgttgcattgaactttgaaagtgaca 24283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 12838165 - 12838282
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| ||| |||||| || | | ||||||||  |||||||||   |||| || ||||| ||| |||| | |||||||||||     
T  12838165 ctataataaccttatttatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggcaaaacaacatttaatgttgcac 12838264  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  12838265 tgaactttgaaagtgaca 12838282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 26724080 - 26723963
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| | |||| || | | |||||||| ||||||||||   ||||||| |||||| || | |  | ||||||||||||    
T  26724080 ctataatgaccttattcatttaatatcttatttcatatatttctctctccacaataaataattaagggtaatattgataaaatatcatttaatgttgcat 26723981  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  26723980 tgaattttgaaagtgaca 26723963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 30586759 - 30586832
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggta 162  Q
    |||||||||||| ||||||||||||| ||| |||||| || | | ||||||||| || |||||||  |||||||    
T  30586759 ttttctataataaccttaatcatttaatatctcatttcatatatttctctctctgcagtaaatatctaagggta 30586832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 6799258 - 6799162
Alignment:
Q  114 attatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||| ||||||||| | | ||||||||   ||||||||   |||| || |||||| || |||| | |||||||||||||||| |||||||||||||    
T  6799258 attatatcattttatatatttctctctccgtaataaataattaaggataatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 6799162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 18470454 - 18470346
Alignment:
Q  102 ccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttg 201  Q
    ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||| | |||||||||||||||| ||||    
T  18470454 ccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg 18470355  T
Q  202 aaagtgaca 210  Q
    |||||||||    
T  18470354 aaagtgaca 18470346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 32049573 - 32049509
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatat 153  Q
    ||||||||||||| |||||||||||| || ||||||| || | | | ||||||| ||||||||||    
T  32049573 ttttctataatattcttaatcatttaatacttcatttcatgtatttatctctctgcaataaatat 32049509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 33173922 - 33173846
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||| |||||||||   |||| || |||||  || |||| | |||||||||||||||| |||||||||||||    
T  33173922 tctctctctgcaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 33173846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 36881317 - 36881501
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  36881317 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaattatttattatttcattttat 36881416  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  36881417 ttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 36881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 13364878 - 13365064
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  13364878 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 13364977  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13364978 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 13365064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 23088173 - 23087987
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  23088173 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 23088074  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23088073 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 23087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 46694352 - 46694166
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  46694352 agaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 46694253  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46694252 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 46694166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 3383111 - 3383297
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||||||||||||    
T  3383111 agaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaaacatttattatttcatttt 3383210  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3383211 atttttttctctctctacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 3383297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 198890 - 199074
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  198890 agaaattgcactgaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaatcatttattatttcatttt 198989  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  198990 atttttttctctctctacaataaatatgcaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaaatgacaa 199074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 19241909 - 19241724
Alignment:
Q  30 gaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttta 127  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  19241909 gaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaatcatttattatttcatttta 19241810  T
Q  128 tttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     |||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  19241809 cttttttctctctctacaataaacatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttaaaagtgacaagt 19241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 43750172 - 43750357
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||| |||||||||||||||| |    
T  43750172 agaaattggagtaaccaagaaaccaaataaattttgttatttttgatgaaattatatgtgtgttttctataatacacttaaccatttattatttcattct 43750271  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43750272 attttt-tctctctcaacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 43750357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 29375173 - 29375353
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaata--tgtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||| ||||    
T  29375173 agaaattgcagtaaccaagaaaccaaataaattttcttatttttgatgaaaatatgtgtgtgttttctataatacccttaaccatttattatttcttttt 29375272  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||||      ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29375273 ttttt------tctctacaataaatatgcaagggcattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 29375353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 27707172 - 27707050
Alignment:
Q  85 tgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaa 184  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||  ||||||||||||||  ||||||||||||||||||||||| ||||    
T  27707172 tgtgttttctataatatccttaaccatttattatttctttttatttttttctcttactacaataaatatg-tagggtattattgacaagacaatagttaa 27707074  T
Q  185 tgttgcattgaaatttgaaagtga 208  Q
    |||| |||| ||||||||||||||    
T  27707073 tgttacattaaaatttgaaagtga 27707050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 18356053 - 18355924
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataatt 182  Q
    ||||| |||||||||||| ||||| |||||||| |||||||| |||| || ||||||||||||||||||| | |||||||||||||| ||  ||||||||    
T  18356053 tgtgttttttctataatacccttactcatttatcatttcattctattatt-tctctctctacaataaataagtaagggtattattgataaatcaataatt 18355955  T
Q  183 aatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||| |||||||||||||||    
T  18355954 aatgttgcattgaaacttgaaagtgacaagt 18355924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 13703338 - 13703433
Alignment:
Q  115 ttatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||| |||||||   ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  13703338 ttatttcattctattttt---tctctctgcaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagt 13703433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 37780996 - 37781152
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    ||||||||||| ||||||||||||||| | ||||||||||  ||||||||   |||| |||||||||||||||| || | || ||| |||||||||||||    
T  37780996 aaataaattttattatttttgatgaaattctgtgtgttttttctataatactattaaccatttattatttcattctagtatt-tctttctctacaataaa 37781094  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    |||  |||||||||||||||||  ||||||||||  ||| ||||||||||||||||||    
T  37781095 tatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 52009229 - 52009106
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    ||||||||||||  |||||  ||||||||||| ||| |||| || | ||||||||||||||||| | || | ||||||||||||||||||||||||||||    
T  52009229 ttttctataatacacttaactatttattattttattctattatt-tatctctctacaataaataggtaatgttattattgacaagacaataattaatgtt 52009131  T
Q  189 gcattgaaatttgaaagtgacaagt 213  Q
    |||| |||| |||||||||||||||    
T  52009130 gcatcgaaacttgaaagtgacaagt 52009106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 48436325 - 48436445
Alignment:
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    |||||||||||  |||||  ||||||||||||||| |||| ||   |||||||||||||||||   ||| ||||||||||||||  ||||||||||||||    
T  48436325 tttctataatacacttaacaatttattatttcattatattatt---tctctctacaataaataattaagtgtattattgacaagctaataattaatgttg 48436421  T
Q  190 cattgaaatttgaaagtgacaagt 213  Q
    |||||||| |||||||||||||||    
T  48436422 cattgaaacttgaaagtgacaagt 48436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 48963223 - 48963324
Alignment:
Q  94 tataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
    |||||||  ||||| |||||||||||||||| ||||| ||||||| |  |||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  48963223 tataataatcttaaccatttattatttcattctatttatctctcttt--acaataaatatataaggatattattgacaagacaataattaatgttgcatt 48963320  T
Q  194 gaaa 197  Q
    ||||    
T  48963321 gaaa 48963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 31874015 - 31873919
Alignment:
Q  115 ttatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||| |||||||  |||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31874015 ttatttcattctattttta-ctctctctgcaataaatatataagggtatt-ttgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 31873919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 32835129 - 32835045
Alignment:
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||| |||||  ||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||    
T  32835129 ttttttctctctctacaattaatatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagt 32835045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 53559829 - 53559667
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctata--atatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    ||||||||| |||||||||||||||||| | | |||||||| | ||  |||||||||  | ||||||||||||||||||| || | | ||||||||||||    
T  53559829 caaataaatgttgttatttttgatgaaattctctgtgttttatttacgatatccttacccgtttattatttcattttattatt-tatttctctacaataa 53559731  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||| | ||  |||||||| | ||  |||| |||||||||||||||||| |||| ||||||||||    
T  53559730 ataagtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagt 53559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 54086651 - 54086771
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| ||||| ||||| ||||||||||| |||| || | |||||||| |||| ||| | |||||||||||||| ||  ||||||||||||||    
T  54086651 ttttctataatacccttactcatt-attatttcattctattatttt-tctctctataatacataggtaagggtattattgataaatcaataattaatgtt 54086748  T
Q  189 gcattgaaatttgaaagtgacaa 211  Q
    | ||||||| |||||||||||||    
T  54086749 gtattgaaacttgaaagtgacaa 54086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 46188863 - 46188967
Alignment:
Q  89 ttttctataatatccttaatcattt-attatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgt 187  Q
    |||||||||||| ||||||| |||| ||||||||||| |||| || ||||||||||||||||||| |||||  ||||||||||||  |||||||||||||    
T  46188863 ttttctataatacccttaatgattttattatttcattatattatt-tctctctctacaataaataagcaagaatattattgacaaaccaataattaatgt 46188961  T
Q  188 tgcatt 193  Q
    | ||||    
T  46188962 tacatt 46188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 13702804 - 13702890
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcattt 113  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||  |||||| |||||||||||||| | |||| |||||    
T  13702804 agaaattgcagtaaccaagaaaccaaataaattttgatatttttgatgaaattatatgtttgttttctataatacctttaaccattt 13702890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 1455367 - 1455207
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttt--tctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    |||||||||||||||||||||||| ||| ||| |||||||  ||||||||   ||| | |||||||||||| ||| |||  ||   || ||||||  ||     
T  1455367 caaataaattttgttatttttgataaaattatttgtgtttcttctataattctcttcaccatttattatttaattatataatt---tccctctacggtag 1455271  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||| | |||| | ||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  1455270 ataggtaaggatgttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagt 1455207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 24064283 - 24064438
Alignment:
Q  53 aaataaattttgttatttttgatgaaaata--tgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    |||||||||||||||| ||| || ||| |   ||||| |||||||||||| |||||  |||||||||||| ||| |||| || |||||||||||||||||    
T  24064283 aaataaattttgttatattttataaaattcactgtgttttttctataatacccttacccatttattattttattctattatt-tctctctctacaataaa 24064381  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    || | ||   ||||||||| ||  |||||||||||||| |||| ||| ||||||||||||    
T  24064382 taggtaa---tattattgataaaccaataattaatgttacattaaaacttgaaagtgaca 24064438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 23771447 - 23771326
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| |||| |||||||| ||| | |||| || | | |||||||||||||||||||  |||||||| ||  |  || |||||| ||||||||    
T  23771447 ttttctataataaccttcatcatttaatatcttatttcatgtatttctctctctacaataaataatcaagggtaataaaggtaaaacaatatttaatgtt 23771348  T
Q  189 gcattgaaatttgaaagtgaca 210  Q
    |||||||| |||||||||||||    
T  23771347 gcattgaactttgaaagtgaca 23771326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 48820508 - 48820561
Alignment:
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagt 48820561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 32835198 - 32835138
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt 89  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  32835198 agaaattgcaataaccaagaaaacaaataaattttgttatttttgatgaaattatgtgtgt 32835138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 6901655 - 6901782
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataatt 182  Q
    ||||| |||||| ||||| ||||| ||||||||||||||||| | || || |||||||| ||||||||  |  |||| ||||||||| ||  |||| |||    
T  6901655 tgtgttttttctctaatacccttactcatttattatttcattctgttatt-tctctctcaacaataaagtt--aaggatattattgataaatcaatgatt 6901751  T
Q  183 aatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||| || ||||||||||||    
T  6901752 aatgttgcattgaaacttaaaagtgacaagt 6901782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 52805244 - 52805083
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    ||||||||||||| ||||||||||||| | | ||  | ||||||||||||  ||||  |||||||||||| ||| |||| || || ||  ||||||| ||    
T  52805244 aaataaattttgtcatttttgatgaaattgtttgcattttttctataatactcttacacatttattattttattatattatt-tccctgcctacaattaa 52805146  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || | |||||| ||||||| ||  ||||||| |||||||||| |||| |||||||||||||||    
T  52805145 taagtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaagt 52805083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 19897146 - 19896994
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    ||||||||||||||||||||| |||||| | | ||||||||  |||||||| ||||| || |||||||||||||| |||| ||   ||| | || |||||    
T  19897146 caaataaattttgttattttttatgaaattctttgtgttttttctataatacccttactcttttattatttcattctattatt---tctttttataataa 19897050  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaag 205  Q
    |||   |||| ||||||||| ||  ||||||||||||||| ||| ||| |||||||    
T  19897049 atagataaggatattattgataaaccaataattaatgttgtattaaaacttgaaag 19896994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 48152141 - 48152024
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||  ||| ||||||||| | | ||||| || ||||||||||   ||||||| |||||  || |||| | ||||||||||||    
T  48152141 ctataataaccttattcatttgatatctcattttatatatttctctttcaacaataaataactaagggtaatattggtaaaacaacatttaatgttgcat 48152042  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  48152041 tgaactttgaaagtgaca 48152024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 26105079 - 26105183
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgt-gtgttttct-ataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||||||| ||||||||||||||||||||| ||||   | | | ||||||| | | |||| |||||| |||||||||||||||| ||||||| ||||||    
T  26105079 accaataaatcaaataaattttgttatttttaatgatttttttttgtgtttttttacaatacccttaaccatttattatttcattatatttttttctctc 26105178  T
Q  140 tctac 144  Q
    |||||    
T  26105179 tctac 26105183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 32980755 - 32980679
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||||||||||||   ||||||| |||||| || ||| || ||||||||| |||||| |||||||||||||    
T  32980755 tctctctctacaataaataactaagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgaca 32980679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 43159867 - 43159967
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| ||||| ||||||| | | | ||||||| ||||||||||  ||||||| |||||| ||  ||| | |||||||||||||||| ||||||||||||    
T  43159867 atttaatattttattttatatgtttttctctctgcaataaatatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgac 43159966  T
Q  210 a 210  Q
    |    
T  43159967 a 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 48820480 - 48820444
Alignment:
Q  43 ccaataaaccaaataaattttgttatttttgatgaaa 79  Q
    |||||||||||||||||||||||||||||||||||||    
T  48820480 ccaataaaccaaataaattttgttatttttgatgaaa 48820444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 27707406 - 27707363
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttattttt 72  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  27707406 agaaattgcagtaaccaagaaaccaaataaattttgttattttt 27707363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 48214197 - 48214106
Alignment:
Q  119 ttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||| | | |||||||| ||||||||||   ||||||| |||||  || |||| | |||||||||||||||| |||||||||||||    
T  48214197 ttcattttatatatttctctctccacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 48214106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 40228361 - 40228280
Alignment:
Q  109 catttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
    ||||||||||||| || |||| ||   ||||||||||||||||| | ||| || ||||| ||||| |||||||||||||||||||    
T  40228361 catttattatttcgttatattatt---tctctctacaataaataagtaagagttttattaacaagccaataattaatgttgcatt 40228280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 3643286 - 3643402
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||| || |||| | |||| |||||||    
T  3643286 ctataatgaccttattaatttaatatttcatttcatatgtttctctctccgcaataaatatctaagggtaatattgataaaacaacatttaa-gttgcat 3643384  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  3643385 tgaactttgaaagtgaca 3643402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 33874636 - 33874753
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| ||   | ||||||||  ||||||||||  ||||||| |||||  || ||| || ||||||||||||    
T  33874636 ctataatggccttattaatttaatatttcatttcatacgtttctctctccgcaataaatatctaagggtaatattggtaaaacactatttaatgttgcat 33874735  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  33874736 tgaactttgaaagtgaca 33874753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 37293553 - 37293629
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||||| | ||||||| |||||| ||   |  ||||||||||||||||||| ||||||| |||||||    
T  37293553 tctctctctacaataaataggtaagggtaatattgataa---atcaattaatgttgcattgaaacttgaaagggacaagt 37293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 43775480 - 43775597
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||||| ||||||||||||    
T  43775480 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaatagctaaggataatattggtaaaacaatatttaatgttgcat 43775579  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  43775580 tgaactttgaaagtgaca 43775597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 44522499 - 44522567
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattattt 120  Q
    |||||||||||| |||||||| ||||||  |||||| ||||||||||||   |||| ||||||||||||    
T  44522499 caaataaattttattattttttatgaaatcatgtgttttttctataatacttttaaccatttattattt 44522567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 51584442 - 51584490
Alignment:
Q  164 tattgacaagacaataattaatgttgcattgaaatttgaaagtgacaag 212  Q
    ||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  51584442 tattgacaaaacaataattaatgttacattgaaatttgaatatgacaag 51584490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 55141566 - 55141678
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| ||||||||| | | | ||| || ||||||||||   ||||||| |||||  || |||| | ||||||||||||    
T  55141566 ctataataaccttattcatttaatatctcattttatatatttatctttcaacaataaataactaagggtaatattggtaaaacaacatttaatgttgcat 55141665  T
Q  193 tgaaatttgaaag 205  Q
    |||| ||||||||    
T  55141666 tgaactttgaaag 55141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 52173885 - 52173786
Alignment:
Q  111 tttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||| |||||||||| || | | | ||||||| |||||||||| ||| |||| |||||  || |||| | ||| |||||||||||| |||||||||||||    
T  52173885 tttaatatttcatttcatatgtttttctctctgcaataaatattcaaaggtaatattggtaaaacaacatttattgttgcattgaactttgaaagtgaca 52173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 2154200 - 2154246
Alignment:
Q  164 tattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||||| | |||||||||||||||| |||||||||||||    
T  2154200 tattgataagacaacatttaatgttgcattgaactttgaaagtgaca 2154246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 17755246 - 17755284
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattatttc 121  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  17755246 tgtgttttttctataatatctttaatcatttattatttc 17755284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 19056566 - 19056604
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattatttc 121  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  19056566 tgtgttttttctataatatctttaatcatttattatttc 19056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 24154 - 24271
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| |||||||||| || | | ||| |||| | |||||||  |||| | || |||||  || |||| | ||||||||||||    
T  24154 ctataataaccttattcatttaatatttcatttcatatatttctttctccaaaataaattagcaaagataatattggtaaaacaacatttaatgttgcat 24253  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| || ||||||||||    
T  24254 tgaacttcgaaagtgaca 24271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 27039696 - 27039813
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| | |||| || | | ||||||||  |||||||||  |||||||| | |||  || |||| | ||| ||||||||    
T  27039696 ctataatagccttattcatttaatatcttatttcatatatttctctctccgcaataaataatcaagggtaatgttggtaaaacaacatttattgttgcat 27039795  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  27039796 tgaactttgaaagtgaca 27039813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 32854038 - 32854155
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||||| |||| || | | ||||||||  |||||||||   ||||||| | |||| || |||| | ||| |||| |||    
T  32854038 ctataataaccttagtcatttaatattttatttcatatatttctctctccgcaataaataactaagggtaatgttgataaaacaacatttattgttacat 32854137  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  32854138 tgaactttgaaagtgaca 32854155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 44522587 - 44522679
Alignment:
Q  109 catttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||||||| |||||||| |    ||||||||||||||||||| ||   ||||||| ||||  ||||| ||||||||| ||| ||||||||||    
T  44522587 catttattatttaattttattata---tctctctacaataaatatgtaaaaatattattaacaaaccaatatttaatgttgtattaaaatttgaaa 44522679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 54106419 - 54106302
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||| | |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  54106419 ctataatgaccttattcatttaatatctcatttcatatatttctctctatgcaataaataactaaggataatattggtaaaacaacatttaatgttgcat 54106320  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  54106319 tgaactttgaaagtgaca 54106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 27028146 - 27028222
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  |||||||||  |||||||| | |||  || |||||| ||| |||||||||||| |||||||||||||    
T  27028146 tctctctccgcaataaataaccaagggtaatgttggtaaaacaatatttattgttgcattgaactttgaaagtgaca 27028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 47104262 - 47104362
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | |||||||  |||||||||||  || | || |||||  || |||| | |||||||||||||||| ||||||||||||    
T  47104262 atttaatatttcatttcatatgtttctctcttcacaataaatatctaatgataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgac 47104361  T
Q  210 a 210  Q
    |    
T  47104362 a 47104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 51219255 - 51219291
Alignment:
Q  174 acaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| |||||||||||||||| |||||||||||||    
T  51219255 acaatatttaatgttgcattgaactttgaaagtgaca 51219291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 321661 - 321847
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  321661 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatatccttaatcatttattatttcatttt 321760  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  321761 atttttttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 321847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 47038092 - 47037908
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47038092 agaaattgtactaactaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttcattttat 47037993  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47037992 ttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 47037908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 23045521 - 23045335
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  23045521 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 23045422  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  23045421 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 23045335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 40783899 - 40783713
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  40783899 agaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 40783800  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40783799 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 40783713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 284368 - 284554
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  284368 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaatcatttattatttcatttt 284467  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  284468 acttttctctctctctacaataaatatgcaagggtattattgataagtcaataattaatgttgcattgaaacttgaaagtgacaagt 284554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 23526275 - 23526460
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||| |||||||||||||||| |    
T  23526275 agaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgttttctataatacccttaaccatttattatttcattct 23526374  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23526375 attttt-tctatctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 23526460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 33082780 - 33082962
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||| |||||||||||| ||| |    
T  33082780 agaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccatttattattttattct 33082879  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||| ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  33082880 attttt-tctctttctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagaca 33082962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 27211206 - 27211011
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| |||||| |||||||||||| ||| |    
T  27211206 agaaattgcaataaccaagaaaccaaataaattttgttatttttgaggaaattatatgtgtgttttctataatacccttaaccatttattattttattct 27211107  T
Q  127 atttt---------tctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||         ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  27211106 attttttttttctctctctctctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaatgtgacaagt 27211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 24772147 - 24771965
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||| |||||||||||| ||| |    
T  24772147 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccatttattattttattct 24772048  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||| ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||| ||||||| ||||    
T  24772047 attttt-tctctttctacaataaatatttaaggctattattgaaaaaacaataattaatattgcattgaaacttgaaagagaca 24771965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 46771672 - 46771859
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||  ||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||| |||||||| ||||||| |    
T  46771672 agaaattgcagtaaccaagaaattaaataaattttgttatttttgatgaaattatgtgtgtgttttctataatacccttaaccatttattttttcattct 46771771  T
Q  127 atttttct-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| | |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||    
T  46771772 attttttttctctctctacaataaatatgtaagagtattattgacaagaaaataattaatgttacattgaaacttgaaagtgataagt 46771859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 211
Target Start/End: Original strand, 18396754 - 18396913
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    |||||||||||||||||||| |||||| ||||||||  |||||||||||||  |||| |||| ||||||||||| |||| || |||||||||||||||||    
T  18396754 aaataaattttgttattttttatgaaattatgtgtggtttttctataatatatttaaccattcattatttcattctattatt-tctctctctacaataaa 18396852  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    || | ||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  18396853 taagtaagggaattattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaa 18396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 1838046 - 1837884
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatt-tttctctctctctacaataaa 150  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| |||||  |||||||||||| ||  |||| ||||||||||| |||||||||    
T  1838046 caaataaattttgttatttttgatgaaattatgtgttttttctataatacccttacccatttattattttatcatattatttctctctctttacaataaa 1837947  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||    ||||||||||||| ||  ||||||||||||||||||||||| || ||||||||||||    
T  1837946 tagattagggtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaagt 1837884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 202
Target Start/End: Complemental strand, 27143231 - 27143079
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtg---tgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaata 148  Q
    ||||||||||||||||||||||| |||| |  |||   | ||||||||||||| |||||||||||||||||||||| |||| || |||||||||||| ||    
T  27143231 caaataaattttgttatttttgaggaaattccgtgagtttttttctataatattcttaatcatttattatttcattctattatt-tctctctctacagta 27143133  T
Q  149 aatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttga 202  Q
    |||| | |||||||||||||||||  ||||||||||||||| ||||||| ||||    
T  27143132 aataggtaagggtattattgacaaaccaataattaatgttgtattgaaacttga 27143079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 34458950 - 34458780
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctc 141  Q
    ||||| ||| ||||||||||||  ||||||| |||||| | ||||| |||||||||||| ||||| | ||||||||||||||| |||| || ||||||||    
T  34458950 accaagaaatcaaataaatttttctattttttatgaaattctgtgttttttctataataaccttactaatttattatttcattctattatt-tctctctc 34458852  T
Q  142 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || ||| |||||| ||||||||||| |  ||  |||||||||||||||||| |||| |||||||||||||||    
T  34458851 tataatgaatatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagt 34458780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 52037362 - 52037241
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||| || |||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||  ||||| |||||||||||||||| |||    
T  52037362 agaaattgcattatccaaaaaaccaaataaattttattatttttgataaaattatgtgtgttttctataatactcttaaccatttattatttcattctat 52037263  T
Q  129 ttttctctctctctacaataaatat 153  Q
    ||||   ||||||||||||||||||    
T  52037262 tttt---tctctctacaataaatat 52037241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 31004012 - 31003843
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| ||||||||||||   |||||| |||||| ||||||| ||||  |||||||| |||||| |||||||||||| ||| |||| || ||||||    
T  31004012 accaagaaatcaaataaatttt---atttttaatgaaagtatgtgtattttttctataatacccttaaccatttattatttaattctattatt-tctctc 31003917  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| | ||||||||||| |||||  ||| ||||||||||||||||||| ||||||||| |||||    
T  31003916 tctacaataaataggtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagt 31003843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 52478016 - 52478170
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctc 141  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||  |||||| |||||||| |||| || || |||||    
T  52478016 accaagaaatcaaataaattttgttatttttgatgaaattttgtgttttttctataataaccttaaaaatttatcatttcattctattatt-tccctctc 52478114  T
Q  142 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 197  Q
    ||| |||||||   |||| ||||||||||||  ||||||||||||||| |||||||    
T  52478115 taccataaatagataaggatattattgacaaatcaataattaatgttgaattgaaa 52478170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 40261501 - 40261341
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt---ctataatatccttaatcatttattatttcattttatttttctctct 138  Q
    ||||| ||| |||||||||||||||| ||||||||||| |  |||||||||   |||||||||| |||| |||||||||||||              |||    
T  40261501 accaagaaatcaaataaattttgttaattttgatgaaattgcgtgtgtttttttctataatatcattaaccatttattatttc--------------tct 40261416  T
Q  139 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  40261415 ctctacaataaatatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagt 40261341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 3657125 - 3657279
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| ||||||||||||||||||||| |||||| | ||| ||||||  |||||||| |||||| ||||||  |||||||| |||| ||| |||||    
T  3657125 accaagaaatcaaataaattttgttatttttaatgaaattttgtatgttttttctataataaccttaaccattta--atttcattctattattc-ctctc 3657221  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 197  Q
    ||||||||||||| | ||  |||||||||||||  |||||||||||||||||||||||    
T  3657222 tctacaataaataggtaaaagtattattgacaaaccaataattaatgttgcattgaaa 3657279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 40562437 - 40562342
Alignment:
Q  116 tatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||| ||||||| ||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40562437 tatttcattatattttt-tctatctctgcaataaatatgcaagg-tatcattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 40562342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 51064975 - 51064812
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttct-----ataatatccttaatcatttattatttcattttatttttctctctctctacaa 146  Q
    ||||||||| |||| ||||||||||||| | | |||||||| |     |||||| ||||| || |||||||||||||| |||| || |||||||||||||    
T  51064975 caaataaatgttgtcatttttgatgaaattctttgtgttttttctataataatacccttactcgtttattatttcattatattatt-tctctctctacaa 51064877  T
Q  147 taaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||| | |||||||||||||| ||   ||||||||| |||||||||||| |||||||||||||    
T  51064876 taaataggtaagggtattattgataaactaataattaacgttgcattgaaacttgaaagtgacaa 51064812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 1749365 - 1749455
Alignment:
Q  52 caaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctct 140  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||| |||||||||||| ||| |||||||||||||||    
T  1749365 caaataaattttgttatttttgatgaaattatatgtgtgttttctataatagcattaaccatttattattttattctatttttctctctct 1749455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 24876633 - 24876782
Alignment:
Q  62 ttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggt 161  Q
    |||||||||||||||| | ||||||| |||||||||||| | || | ||||||| |||||||| |||| || || ||| ||| |||||||| | ||| ||    
T  24876633 ttgttatttttgatgatattatgtgt-ttttctataatacctttgaccatttatcatttcattctattatt-tcactcactagaataaataagtaagagt 24876730  T
Q  162 attattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||||  ||||||||||||| ||||||| | |||||||||||||||    
T  24876731 attattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagt 24876782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 31061662 - 31061515
Alignment:
Q  62 ttgttatttttgatgaaaatatgtgtgttttct--ataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagg 159  Q
    ||||||||||| |||||| |||||||||||| |  |||||| ||| || |||||||||||||||| |||| ||     |||||||| ||||||||  |||    
T  31061662 ttgttattttttatgaaattatgtgtgttttttccataataccct-aaccatttattatttcattatattatt-----tctctacagtaaatatgtgagg 31061569  T
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||| |||  ||||||||||||||||||||||| |||| ||||||||||    
T  31061568 gtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagt 31061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 40052597 - 40052520
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||| |||||||| |||| | ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  40052597 tctctctataataaataagcaacgatattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagt 40052520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 7765072 - 7765186
Alignment:
Q  53 aaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    ||||||||||||||||||||| |||||  ||||||||||||||  ||||| || ||| |||||||||||| ||||| ||||     |||| | |||||||    
T  7765072 aaataaattttgttatttttggtgaaattatatgtgtgttttccgtaatacccataaccatttattatttaattttttttt-----ctctttgcaataaa 7765166  T
Q  151 tatgcaagggtattattgac 170  Q
    ||||||| | ||||||||||    
T  7765167 tatgcaatgatattattgac 7765186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 14351989 - 14351869
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaat---atgtgtgttttctataatatccttaatcatttattatttcattttatttttctctct 138  Q
    ||||| ||| |||||||||||||||||||||||||| | |   |||| | ||||||||||||||| ||| |||||| |||||| || |||| || | |||    
T  14351989 accaagaaaacaaataaattttgttatttttgatgatattctaatgt-tattttctataatatccgtaaccatttaatatttcgttctattatt-tttct 14351892  T
Q  139 ctctacaataaatatgcaagggt 161  Q
    |||||||||||||| | ||||||    
T  14351891 ctctacaataaataagtaagggt 14351869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 25929173 - 25929241
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttc 121  Q
    ||||||||||||||| ||||||| ||| | ||||| |||||||  |||||||||| |||||||||||||    
T  25929173 aaataaattttgttaattttgattaaattctgtgttttttctacgatatccttaaccatttattatttc 25929241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 23167004 - 23166914
Alignment:
Q  115 ttatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagt 206  Q
    |||||| |||||||| || || ||||||| ||||||||   ||| |||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  23167004 ttattttattttattatt-tccctctctaaaataaatagataagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagt 23166914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 32348130 - 32348020
Alignment:
Q  97 aatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 196  Q
    |||| ||||| ||||||| ||| ||||||||| | | ||| |||| ||||||||||   ||||||| |||||  || |||| | ||||||||||||||||    
T  32348130 aataaccttattcatttaatatctcattttatatatttctttctccacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaa 32348031  T
Q  197 atttgaaagtg 207  Q
     ||||||||||    
T  32348030 ctttgaaagtg 32348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 9127825 - 9127705
Alignment:
Q  93 ctataatatccttaatcatttattatttcattt--tatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 190  Q
    |||||||| ||||| ||||||| ||||||| ||  ||| |||||||||||| |||||||||  |||||| || || ||  || |||| | ||||| ||||    
T  9127825 ctataataaccttattcatttaatatttcacttcatatatttctctctctccacaataaatgagcaaggataatactggaaaaacaacatttaatattgc 9127726  T
Q  191 attgaaatttgaaagtgacaa 211  Q
    |||||| || |||||||||||    
T  9127725 attgaacttcgaaagtgacaa 9127705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 18033907 - 18034024
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||| || |||||| ||||||||| ||    
T  18033907 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattgataaaacaatatttaatgttggat 18034006  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  18034007 tgaactttgaaagtgaca 18034024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 35700456 - 35700573
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| |||||| || | | ||| ||||  |||||||||   ||||||| |||||| || |||| | |||| |||||||    
T  35700456 ctataatagccttattcatttaatatctcatttcatatatttctttctccgcaataaataactaagggtaatattgataaaacaacatttaaagttgcat 35700555  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  35700556 tgaattttgaaagtgaca 35700573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 40562797 - 40562733
Alignment:
Q  54 aataaattttgttatttttgatgaaa-atatgtgtgttttctataatatccttaatcatttatta 117  Q
    |||||||||||||||||||||| ||  |||| |||||||||||||||| | |||| |||||||||    
T  40562797 aataaattttgttatttttgataaattatatatgtgttttctataataccattaaccatttatta 40562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 49756742 - 49756678
Alignment:
Q  138 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttga 202  Q
    ||||| |||||||||   |||||||| |||||||| |||||||||| |||||||||||| |||||    
T  49756742 tctctgcaataaatacttaagggtataattgacaaaacaataattattgttgcattgaactttga 49756678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 19455521 - 19455598
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||||||  |||||||||   ||||||| |||||  || |||| | |||||||||||||||| ||||||||||||||    
T  19455521 tctctctccgcaataaataattaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaa 19455598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 25577582 - 25577699
Alignment:
Q  92 tctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgca 191  Q
    ||||| ||| |||| || ||||||||| |||||| || ||| ||| |||||||||||||||   |||||| || |||| || ||||| |||| | || ||    
T  25577582 tctatgatacccttgataatttattatgtcatttcatctttttctttctctacaataaataactaagggttttgttgataaaacaatcattagttttaca 25577681  T
Q  192 ttgaaatttgaaagtgac 209  Q
    ||||| ||||||| ||||    
T  25577682 ttgaactttgaaaatgac 25577699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 25929248 - 25929321
Alignment:
Q  142 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagtga 215  Q
    |||||||||||   |||||||||||||| ||  ||||| |||||||||| |||||| ||||||| | |||||||    
T  25929248 tacaataaatagataagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtga 25929321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 38597747 - 38597630
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| | |||| || | | |||||||| | ||||||||   ||||||| | |||  || |||||| ||| ||||||||    
T  38597747 ctataataaccttagtcatttaatatcttatttcatatatttctctctccataataaataactaagggtaatgttggtaaaacaatatttattgttgcat 38597648  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  38597647 tgaactttgaaagtgaca 38597630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 2572131 - 2572067
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatat 153  Q
    |||||||||||| ||||||| ||||| |||||||||| || | | || |||||| ||||||||||    
T  2572131 ttttctataataaccttaattatttaatatttcatttcatatatttcactctctgcaataaatat 2572067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 14925610 - 14925683
Alignment:
Q  138 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||| | ||| |||||||||||||  |||||  ||| |||||||||||| ||||||  |||||||    
T  14925610 tctctacaataaataggtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagt 14925683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 20605714 - 20605822
Alignment:
Q  102 ccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttg 201  Q
    ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||  ||| | || |||||  || |||| | |||||||||||||||| ||||    
T  20605714 ccttattcatttaatatctcatttcatatatttctctctccgcaataaataaccaatgataatattggtaaaacaacatttaatgttgcattgaagtttg 20605813  T
Q  202 aaagtgaca 210  Q
    |||||||||    
T  20605814 aaagtgaca 20605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 51613550 - 51613450
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||| ||  ||||||||||  ||| ||| |||||| || |||| | |||||| ||||||||| ||||||||||||    
T  51613550 atttaatatttcatttcatatgtttctctatccgcaataaatatctaagagtaatattgataaaacaacatttaatgatgcattgaactttgaaagtgac 51613451  T
Q  210 a 210  Q
    |    
T  51613450 a 51613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 1605614 - 1605799
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  1605614 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 1605713  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1605714 attttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaatttgaaagtgacaagt 1605799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 8626517 - 8626703
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  8626517 agaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 8626616  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  8626617 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 8626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 30734725 - 30734541
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  30734725 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 30734626  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  30734625 atttttttctctctctacaataaatatgcaagggtattattgataagataataattaatgttgcattgaaatttgaaaatgacaa 30734541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 13757243 - 13757428
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||    
T  13757243 agaaattacactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcaattattatttcatttt 13757342  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13757343 attttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 13757428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 29260227 - 29260413
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  29260227 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 29260326  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  29260327 atttttttctctctctacaataaatatgtaagggtattattgacaagacagtaattaatgttgcattgaaacttgaaaatgacaagt 29260413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 7761336 - 7761519
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7761336 agaaattgcactaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttcattttat 7761435  T
Q  129 ttttct-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||| | |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  7761436 ttttttcctctctctacaataaatatgcaagggtattattgacaaaataataattaatattgcattgaaacttgaaagtgacaa 7761519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 31559978 - 31559794
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgt--gttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  31559978 agaaattgcattaaccaaaaaatcaaataaattttgttatttttgatgaaaatatgtgtatgttttctgtaatacccttaatcatttattatttcatttt 31559879  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  31559878 ttttttctctctct--acaataaatatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaagtaacaagt 31559794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 4129482 - 4129647
Alignment:
Q  49 aaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaa 146  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  4129482 aaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatacccttaaccatttattatttcattttatttttttctctctctacaa 4129581  T
Q  147 taaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4129582 taaatatgcaagggtattattgacaagacaat-attaatgttgcattgaaacttgaaagtgacaagt 4129647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 15064973 - 15064751
Alignment:
Q  1 aatactccctccgtttcaaaatacgtgt---------agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt-- 89  Q
    |||||||||||||||||||||||| |||         ||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||      
T  15064973 aatactccctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgt 15064874  T
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    ||| |||| || |||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15064873 tttttatactacccttaaccatttattatttgattatattttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 15064775  T
Q  190 cattgaaatttgaaagtgacaagt 213  Q
     ||||||| |||||||||||||||    
T  15064774 tattgaaacttgaaagtgacaagt 15064751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 8235659 - 8235846
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||| ||||||| |||||||||||| |||| | |||||||||  ||||||||||| ||||||||||||||||||||||| |    
T  8235659 agaaattgcagtaaccaagaaacgaaataaaatttgttattttttatgatattatgtgtgtgttttctataatacccttaatcatttattatttcattct 8235758  T
Q  127 atttttctc-tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |  ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  8235759 attttttttatctctctacaataaatatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaagtgacaagt 8235846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 17942478 - 17942664
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgtt--atttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatt 124  Q
    |||||||||| ||||||| ||||||||||  |||| ||  ||||||||||||| ||||||  |||| ||||||||| |||||| ||||||||||||||||    
T  17942478 agaaattgcagtaaccaagaaaccaaatatttttttttttatttttgatgaaattatgtgcgtgttctctataatacccttaaccatttattatttcatt 17942577  T
Q  125 ttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||| ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17942578 ttatttttttctc--tctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagt 17942664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 195
Target Start/End: Original strand, 14287038 - 14287190
Alignment:
Q  43 ccaataaaccaaataaattttgttatttttgatgaaaatatgtg-tgttttctataatatccttaatcatttattatttcattttatttttctctctctc 141  Q
    |||||||| ||||||||||||||||||||| |||||| | |||| | |||||||||||| |||||  | ||||||||||||||||||| || | ||||||    
T  14287038 ccaataaatcaaataaattttgttattttttatgaaattctgtgcttttttctataatacccttacccctttattatttcattttattatt-tatctctc 14287136  T
Q  142 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 195  Q
    |||||||| || | ||| ||||||| || ||  ||||||||| |||||||||||    
T  14287137 tacaataactaggtaagagtattatggataaatcaataattagtgttgcattga 14287190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 30734850 - 30734772
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaa 107  Q
    |||||||||| |||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  30734850 agaaattgcagtaacaaaaaaatcaaataaattttgttatttttgatgaaattatgtgtgttttctataatacccttaa 30734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 26860827 - 26860985
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaat 151  Q
    ||||||| |||| ||||||||||||||| | ||||| | ||||||||   |||||| |||||||||||| ||| |||| || |||||||||  |||||||    
T  26860827 caaataactttttttatttttgatgaaattttgtgtttattctataac--ccttaaccatttattattttattctattatt-tctctctctgtaataaat 26860923  T
Q  152 atgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    | | || ||||||||||||||  ||||||| ||||||| |||||||  ||||| ||||||||    
T  26860924 aggtaaaggtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagt 26860985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 20398407 - 20398294
Alignment:
Q  101 tccttaatcatttattatttcattttatt-tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatt 199  Q
    ||||||| |||||||||||| ||| |||| ||| ||||||| || |||||||| | |||||||||||||||||   |||||||||||||||||| ||| |    
T  20398407 tccttaaccatttattattttattatattatttttctctctgtataataaataggtaagggtattattgacaatttaataattaatgttgcattaaaact 20398308  T
Q  200 tgaaagtgacaagt 213  Q
    |||||||| |||||    
T  20398307 tgaaagtggcaagt 20398294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 3798151 - 3798320
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| ||||||||||||||||||||| |||||  ||| ||||||||  |||||| | |||||  |||||||||||||| | |||| ||   |||     
T  3798151 accaaaaaatcaaataaattttgttatttttcatgaagttatttgtgttttttctataacacccttacacatttattatttcaatatattatt---tct- 3798246  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||| | |||||||||||||| ||    ||||||||||||||||| ||| |||||||||||||||    
T  3798247 tctataataaataggtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagt 3798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 31244834 - 31244951
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | |||||||| |||||||||||  |||  || |||||| || |||| ||||||||||||||    
T  31244834 ctataatgaccttattaatttaatatttcatttcatatgtttctctctccacaataaatatctaagaataatattgataaaacaagaattaatgttgcat 31244933  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  31244934 tgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 847900 - 847832
Alignment:
Q  145 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||  ||| |||||||||||||  |||||||||||||||||||||| ||||||| ||||||||    
T  847900 aataaatatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaagt 847832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 23777452 - 23777337
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| |||||||||| || | | |||||||| |||||||||  |||||| || |||||  || |||| | ||||||||||||    
T  23777452 ctataataaccttattcatttaatatttcatttcatatatttctctctccacaataaatgagcaaggataatattggtaaaacaacatttaatgttgcat 23777353  T
Q  193 tgaaatttgaaagtga 208  Q
    |||| || ||||||||    
T  23777352 tgaacttcgaaagtga 23777337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 21277652 - 21277574
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtg-ttttctataatatccttaatcatttattatttcattttatt 129  Q
    ||||||||||||||||||||| |||||||| | |||| |||||||||||| ||||||| ||||| || |||||| ||||    
T  21277652 caaataaattttgttattttttatgaaaatttatgtgtttttctataatacccttaattatttagtacttcattctatt 21277574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 17251341 - 17251457
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||||||| | ||||||||||  ||||||| |||||  || |||| | ||||||||||||    
T  17251341 ctataatgaccttattaatttaatatttcatttcatatgtttctctctttgcaataaatatctaagggtaatattggtaaaacaacatttaatgttgcat 17251440  T
Q  193 tgaaatttgaaagtgac 209  Q
    |||| ||||||||||||    
T  17251441 tgaactttgaaagtgac 17251457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 19812111 - 19811995
Alignment:
Q  94 tataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
    ||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||   ||||||| ||  | ||| |||| | ||||||||| |||    
T  19812111 tataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataattaagggtaataaaggcaaaacaacatttaatgttgtatt 19812012  T
Q  194 gaaatttgaaagtgaca 210  Q
    ||| |||||||||||||    
T  19812011 gaactttgaaagtgaca 19811995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 879350 - 879309
Alignment:
Q  163 ttattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  879350 ttattgacaaaacaataattaatgttgcattgaactttgaaa 879309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 9838207 - 9838324
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| |||||| || | | || |||||  |||||||||   ||||||| |||||| || |||| | |||| |||||||    
T  9838207 ctataatagccttattcatttaatatctcatttcatatatttccctctccgcaataaataactaagggtaatattgataaaacaacatttaaagttgcat 9838306  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  9838307 tgaactttgaaagtgaca 9838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 22784753 - 22784870
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| || || |||| || | | | |||||| |||||||||| | |||| || |||||  || |||| | ||||||||||||    
T  22784753 ctataatagccttattcatttaataatttatttaatatatttttctctccacaataaataagtaaggataatattggtaaaacaacatttaatgttgcat 22784852  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  22784853 tgaactttgaaagtgaca 22784870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 26470849 - 26470926
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||||| ||||||||||   |||| || ||||| ||| |||| | |||||||||||||||| ||||||||||||||    
T  26470849 tctctctccacaataaataactaaggataatattggcaaaacaacatttaatgttgcattgaactttgaaagtgacaa 26470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 30237134 - 30237017
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| ||| ||||||||| | | ||||| || ||||||||||   ||||||| |||||  || ||||   ||||||||||||    
T  30237134 ctataataaccttattaatttaatatctcattttatatatttctctttcaacaataaataactaagggtaatattggtaaaacaacgtttaatgttgcat 30237035  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  30237034 tgaattttgaaagtgaca 30237017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 33845502 - 33845457
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctata 97  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||    
T  33845502 caaataaattttgttatttttgatgaaattatgtattttttctata 33845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 7170291 - 7170191
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| ||||||||||||| | | ||||||||  ||||||||||  | ||||| || ||  || |||| | |||||||||||||||| ||||||||||||    
T  7170291 atttaatatttcattttatatgtttctctctccgcaataaatatttaggggtaataatggtaaaacaacatttaatgttgcattgaattttgaaagtgac 7170192  T
Q  210 a 210  Q
    |    
T  7170191 a 7170191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 24356156 - 24356256
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||   |||||||||  ||||||| |||||| || |||| | |||||| ||||||||| ||||||||||||    
T  24356156 atttaatatttcatttcatatgtttctctctccggaataaatatctaagggtaatattgataaaacaacatttaatgatgcattgaactttgaaagtgac 24356255  T
Q  210 a 210  Q
    |    
T  24356256 a 24356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 24948358 - 24948282
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  |||||||||| |||||||| ||||   || ||| || |||||||||||||||| |||||||||||||    
T  24948358 tctctctccgcaataaatatccaagggtaatattagtaaaacactatttaatgttgcattgaattttgaaagtgaca 24948282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 11000894 - 11000963
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggta 162  Q
    |||||||||||||||||||||| || ||||||| || | | ||||||| | ||||||||||  |||||||    
T  11000894 ctataatatccttaatcatttaatacttcatttcatatatttctctctatgcaataaatatataagggta 11000963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 33260856 - 33260739
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| | |||||||| || | | ||||||||  ||||||| ||  ||||||| |||||  || |||| | ||||||||||||    
T  33260856 ctataatgaccttattaatttaatgtttcatttcatatgtttctctctccgcaataaacatctaagggtaatattggtaaaacaacatttaatgttgcat 33260757  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  33260756 tgaactttgaaagtgaca 33260739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 52778 - 52702
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||| ||||||||||   ||||||| |||||| || |||  | |||||||||||||||| ||| |||||||||    
T  52778 tctctctccacaataaataattaagggtaatattgataaaacataatttaatgttgcattgaactttaaaagtgaca 52702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 1814762 - 1814814
Alignment:
Q  161 tattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||  ||||||| |||||||||||| || || ||||||||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagt 1814814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 3621731 - 3621631
Alignment:
Q  108 tcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtg 207  Q
    ||||||| ||| |||||| || | | ||||||||| |||||||||   |||| || |||||  |  |||||| |||||||||||||||| ||||||||||    
T  3621731 tcatttaatatctcatttcatatatttctctctctgcaataaataactaaggataatattggtagaacaatatttaatgttgcattgaactttgaaagtg 3621632  T
Q  208 a 208  Q
    |    
T  3621631 a 3621631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 22050163 - 22050088
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  ||||||||||  |||||||| ||||| || |||  | |||||||||||||||| |||||||||||||    
T  22050163 tctctctccgcaataaatatttaagggtat-attgataaaacatcatttaatgttgcattgaactttgaaagtgaca 22050088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 24706489 - 24706303
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  24706489 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 24706390  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  24706389 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 24706303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 12071596 - 12071781
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  12071596 agaaattgcactaaccaataaactaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 12071695  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12071696 attttt-tctctctctacaataaatatgcaagggtattattgacaagacaagaattaatgttgcattgaaacttgaaagtgacaagt 12071781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 22321509 - 22321324
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  22321509 agaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 22321410  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22321409 attttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 22321324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 25704686 - 25704872
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  25704686 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 25704785  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  25704786 atttttttttctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcactgaaacttgaaagtgacaagt 25704872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 14261079 - 14261265
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||| |||||||||||||||||    
T  14261079 agaaattgcactaaccaagaaaccaaataaattttgttatttttgataaaaatatgtgtgtgttttctataatacccttaataatttattatttcatttt 14261178  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14261179 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagt 14261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 44568872 - 44569058
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  44568872 agaaattgcactaaccaaaaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 44568971  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  44568972 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacatgaaagggacaagt 44569058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 21310460 - 21310642
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  21310460 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 21310559  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21310560 ttttttctc----tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 21310642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 40122727 - 40122543
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  40122727 agaaattgcagtaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaaccatttattatttcatttt 40122628  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40122627 atttttttctctct--acaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 40122543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 21661777 - 21661596
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||||||    
T  21661777 agaaattgcagtaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgtgttttctataatacctttaaccatttattatttcatttt 21661678  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21661677 atttttttctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtga 21661596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 21670541 - 21670360
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||||||    
T  21670541 agaaattgcagtaaccaagaaaccaaataaatttttttatttttgatgaaaatatgtgtgtgttttctataatacctttaaccatttattatttcatttt 21670442  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21670441 atttttttctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtga 21670360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 50767899 - 50768081
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||    
T  50767899 agaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataatacccttaataatttattatttcatttt 50767998  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50767999 atttttttctc--tctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 50768081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 34324825 - 34324655
Alignment:
Q  29 agaaattgcactaaccaataaaccaaat-aaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcattt 125  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  34324825 agaaattgcactaaccaagaaactaaattaaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcattt 34324726  T
Q  126 tatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 197  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  34324725 tattttt-tctctctctacaataaatatgcaagggtattattgacaagaaaatcattaatgttgcattgaaa 34324655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 20249252 - 20249073
Alignment:
Q  31 aaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt-tttctataatatccttaatcatttattatttcattttatt 129  Q
    |||||| | ||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| |||||||||||| ||| ||||    
T  20249252 aaattgtattaaccaagaaaccaaataaattttgttatttttgaagaaattatgtgtgtgtttctataatacccttaaccatttattattttattctatt 20249153  T
Q  130 tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  20249152 ttt-tctctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacttgaaagagaca 20249073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 31892273 - 31892453
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||||| ||||||| ||| |||||||||||| ||||||||||||||| |||||||  ||||||||||| | || | |||||||||||||||| |||    
T  31892273 agaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaattatgtgt--tttctataatacctttgaccatttattatttcattctat 31892370  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||| |   |||||||||||||||| |||||||||||||||||||||||||||| |||| ||| || ||||||||||||    
T  31892371 ttttctctctttg--caataaatatgcaaggctattattgacaagacaataattaatgttacattaaaacttaaaagtgacaagt 31892453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 21064834 - 21064974
Alignment:
Q  66 tatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctct-ctctctacaataaatatgcaagggtatt 164  Q
    |||||||||||||| |||||||||||| |||||||  |||||  ||||||||||||||| ||||||| | | |||||||||||||||||| ||| |||||    
T  21064834 tatttttgatgaaattatgtgtgttttttataatactcttaactatttattatttcattctattttttttttctctctacaataaatatgtaagagtatt 21064933  T
Q  165 attgacaagacaataattaatgttgcattgaaatttgaaag 205  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  21064934 attgtcaagacaataattaatgttgcattgaaatttgaaag 21064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 19692771 - 19692943
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| ||||||||| |||| |||||| |||||| | | ||||||||  |||||||||||||| ||||||||||||||||| |||| || ||||||    
T  19692771 accaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttattatttcattctattatt-tctctc 19692869  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  19692870 tctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagt 19692943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 19703356 - 19703528
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| ||||||||| |||| |||||| |||||| | | ||||||||  |||||||||||||| ||||||||||||||||| |||| || ||||||    
T  19703356 accaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttattatttcattctattatt-tctctc 19703454  T
Q  140 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  19703455 tctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagt 19703528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 6129167 - 6129005
Alignment:
Q  52 caaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    |||||||||||||||||||||||| |||   | ||| | ||||||| |||| |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  6129167 caaataaattttgttatttttgataaaattctttgtattttttctacaatacccttaatcatttattatttcattccattatt-tctctctctacaataa 6129069  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||   |||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  6129068 atagataagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagt 6129005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 20714577 - 20714426
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtg---ttttctataatatccttaatcatttattatttcattttatttttctctct 138  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||   |||||||||||| |||||| |||||||||||||||| |||| || | |||    
T  20714577 accaataaatcaaataaattttgttatttttgatgaaactatgtgtgtgtttttctataata-ccttaaccatttattatttcattatattatt-tatct 20714480  T
Q  139 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
     |||| ||||||||   |||||||||||||||||  ||||||||||||||||||    
T  20714479 ttctaaaataaataaataagggtattattgacaaaccaataattaatgttgcat 20714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 32543535 - 32543700
Alignment:
Q  48 aaaccaaataaattttgttatttttgatgaaaatatgtgtgttttct-ataatatccttaatcatttattatttcattttatttttctctctctctacaa 146  Q
    ||||||||||| |||||||| ||||||||||| | | |||||||| | |||||| |||||||||||||||||||||||||||| || ||| | |||||||    
T  32543535 aaaccaaataatttttgttaattttgatgaaattctttgtgtttttttataatacccttaatcatttattatttcattttattatt-tctttttctacaa 32543633  T
Q  147 taaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||   |||||||||| ||||||  ||||||||||||| ||||| ||| |||||||| ||||||    
T  32543634 taaatagataagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagt 32543700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 18507472 - 18507323
Alignment:
Q  62 ttgttatttttgatgaaaatatgtgtgtttt--ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagg 159  Q
    |||||||||||||||||| | ||||||||||  |||||||| |||| |  ||||||||||||||| |||| |||||||||| ||  ||||||| | |||     
T  18507472 ttgttatttttgatgaaattttgtgtgttttttctataata-ccttgacaatttattatttcattatattattctctctctata--ataaataagtaaga 18507376  T
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaag 212  Q
     ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  18507375 atattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaag 18507323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 1146143 - 1146249
Alignment:
Q  102 ccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttg 201  Q
    |||| |||||||| ||| |||||| || | | |||||||||||||||||||  |||||||| ||  | ||| |||| | |||||||||||||||||||||    
T  1146143 ccttcatcatttaatatctcatttcatatatttctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgcattgaaatttg 1146242  T
Q  202 aaagtga 208  Q
    |||||||    
T  1146243 aaagtga 1146249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 1988070 - 1988150
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatg--tgtgttttctataatatccttaa 107  Q
    |||||||||| |||| || ||| |||||||||||| ||||||||||||||| ||||  |||||||||||||||| ||||||    
T  1988070 agaaattgcagtaactaagaaatcaaataaattttattatttttgatgaaattatgtatgtgttttctataatacccttaa 1988150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 6150853 - 6150736
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| ||| || ||||   |||||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||| ||    
T  6150853 ctataataaccttcatcatttaatatctcacttcatttacttctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgtat 6150754  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  6150753 tgaactttgaaagtgaca 6150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 30939314 - 30939197
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| ||   | ||||||||  |||||||||| |||||||| |||||  || |||| | ||||||||||||    
T  30939314 ctataatgaccttattaatttaatatttcatttcatacgtttctctctccgcaataaatatccaagggtaatattggtaaaacaacatttaatgttgcat 30939215  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  30939214 tgaactttgaaagtgaca 30939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 48652268 - 48652445
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgt-gttttctataatatccttaatcatttattatttcattttatt-----tttctc 135  Q
    ||||| ||| |||||||||||||||||||||||||||| | | |||  |||||| ||| |   ||| ||||||||||||||||| ||||     | ||||    
T  48652268 accaagaaatcaaataaattttgttatttttgatgaaattctttgtatttttctttaacacatttactcatttattatttcattatattatctctctctc 48652367  T
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    | |||||||  |||||| | |||||||||||| | ||  ||||||||||||| ||||| ||| || ||||| ||||||    
T  48652368 tttctctacgttaaataggtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagt 48652445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 41955776 - 41955876
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || ||| ||||||||| ||||||||||  |||| || |||||| || |  ||| |||||||||||||||| ||| ||||||||    
T  41955776 atttaatatttcatttcatatttttctctctctgcaataaatatctaaggataatattgataaaattatatttaatgttgcattgaactttaaaagtgac 41955875  T
Q  210 a 210  Q
    |    
T  41955876 a 41955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 3802318 - 3802203
Alignment:
Q  94 tataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
    ||||||| |||| |||||||| ||||| |||| || |   |||||||||||||||||||  |||||||| ||  |  || |||||| |||||||| ||||    
T  3802318 tataataaccttcatcatttaatattttatttcatatacttctctctctacaataaataatcaagggtaataaaggtaaaacaatatttaatgttacatt 3802219  T
Q  194 gaaatttgaaagtgac 209  Q
    ||| ||||||||||||    
T  3802218 gaactttgaaagtgac 3802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 38617932 - 38617857
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||||| ||||||||||  |||| || |||||| || |||||| ||||||||||||| || ||||||||||||||    
T  38617932 tctctctgcaataaatatataaggataatattgataaaacaatatttaatgttgcattaaactttgaaagtgacaa 38617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 37551757 - 37551867
Alignment:
Q  100 atccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatt 199  Q
    |||||| |||||||| |||||||||| || | | ||||||||| |||||||||  |||||||| ||  | ||  |||| | ||||||||| |||||| ||    
T  37551757 atccttcatcatttaatatttcatttcatatgtttctctctctgcaataaataaccaagggtaataaaggcacaacaacatttaatgttgtattgaactt 37551856  T
Q  200 tgaaagtgaca 210  Q
    |||||||||||    
T  37551857 tgaaagtgaca 37551867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 34603783 - 34603666
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||||||||||| ||||| |||   |||| || | | ||||||||| ||||||||    ||||||||||| || || |||| | |||||||| |||    
T  34603783 ctataatatccttaattatttaatatcatatttcatatatttctctctctgcaataaattactaagggtattatagaaaaaacaacatttaatgttacat 34603684  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  34603683 tgaactttgaaagtgaca 34603666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 38866066 - 38865993
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggta 162  Q
    |||||||||||| ||||||||||||| ||| |||||  || | | ||||||||||||| |||||| ||||||||    
T  38866066 ttttctataataaccttaatcatttaatatctcattacatatatttctctctctacaacaaatatccaagggta 38865993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 52057536 - 52057653
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    ||||||||  |||| | ||||| ||||||||||||| | | |||||||| ||||||||||   |||| || |||||| || | || | ||||| ||||||    
T  52057536 ctataataatcttatttatttaatatttcattttatatatttctctctccacaataaataactaaggataatattgataaaataacatttaattttgcat 52057635  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  52057636 tgaactttgaaagtgaca 52057653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 11034408 - 11034490
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaa 172  Q
    |||| ||||||||  |||| ||||| |||||||||| |||| || ||||| |  ||||||||||||||||| ||||||||||||    
T  11034408 ttttttataatatatttaaccatttgttatttcattctattatt-tctctatgcacaataaatatgcaaggatattattgacaa 11034490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 42629413 - 42629358
Alignment:
Q  156 aagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    ||||||| |||||| || |||| | |||||||||||||||| ||||||||||||||    
T  42629413 aagggtaatattgataaaacaaaatttaatgttgcattgaactttgaaagtgacaa 42629358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 1615181 - 1615255
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||||||||||  ||| |||| ||  | ||| |||| | ||||||||| ||||||||||||||||||||    
T  1615181 tctctctacaataaataatcaatggtaataaaggcaaaacaacatttaatgttgtattgaaatttgaaagtgaca 1615255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 17038410 - 17038356
Alignment:
Q  159 ggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||| ||||||||||||||||||||||  || ||| ||| ||||||||    
T  17038410 ggtattattgataagacaataattaatgttgcatgaaactttcaaaatgacaagt 17038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 50839125 - 50839087
Alignment:
Q  175 caataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  50839125 caataattaatgttgcattgaaacttgaaaatgacaagt 50839087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 56576231 - 56576305
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||||||||   |||| || |||||  || |||||| |||||||||||||||| |||||||||||||    
T  56576231 tctctccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 56576305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 3436152 - 3436269
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| |||||||||| || | | ||||||||   ||||||||   |||| || |||||  || |||| | ||||||||||||    
T  3436152 ctataataaccttattaatttaatatttcatttcatatatttctctctccgtaataaataactaaggataatattggtaaaacaacatttaatgttgcat 3436251  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  3436252 tgaactttgaaagtgaca 3436269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 14090399 - 14090286
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||||||||||| ||||| |||   |||| || | | ||||||||| ||||||||    ||||||||||| || || |||| | |||||||| |||    
T  14090399 ctataatatccttaattatttaatatcatatttcatatatttctctctctgcaataaattactaagggtattatagaaaaaacaacatttaatgttacat 14090300  T
Q  193 tgaaatttgaaagt 206  Q
    |||| |||||||||    
T  14090299 tgaactttgaaagt 14090286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 23719869 - 23719986
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| |||||| ||| || | | ||| |||| |||||||||  |||||  || |||||  || |||| | ||||||||||||    
T  23719869 ctataataaccttattcatttaatatttcttttcatatatttctttctccacaataaatgagcaagaataatattggtaaaacaacatttaatgttgcat 23719968  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| || ||||||||||    
T  23719969 tgaacttcgaaagtgaca 23719986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 26933857 - 26933973
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||||||||| || |||| |||||||||| || | | ||||||||| | |||||||   ||||||| |||||| || |||| | |||| |||||||    
T  26933857 ctataatatccttattc-tttaatatttcatttcatatatttctctctctgcgataaataactaagggtaatattgataaaacaacatttaaagttgcat 26933955  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| ||| ||| |||||    
T  26933956 tgaactttaaaaatgaca 26933973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 34284234 - 34284088
Alignment:
Q  54 aataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaat 151  Q
    |||||||||||||| |||||||||||  || ||| | |||||||||||| ||||||| ||   |||| |||||| |  |||   ||||| | ||||||||    
T  34284234 aataaattttgttacttttgatgaaactatttgtattttttctataatacccttaattat---ttatctcatttcaccttt---tctctttgcaataaat 34284141  T
Q  152 atgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |   ||||||||| |||| || ||||||  ||||||||||||||| |||||||    
T  34284140 agtgaagggtattgttgagaaaacaatagataatgttgcattgaactttgaaa 34284088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 36750708 - 36750591
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||||||||||| ||| | ||||||| | | ||||||||  |||||||||   ||||||| | |||  || |||| | ||| ||||||||    
T  36750708 ctataatagccttaatcatttaatatattattttatatatttctctctccgcaataaataattaagggtaatgttggtaaaacaacatttattgttgcat 36750609  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||| ||||||||    
T  36750608 tgaactttgtaagtgaca 36750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 52677230 - 52677347
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  52677230 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcat 52677329  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  52677330 tgaactttgaaagtgaca 52677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 53219177 - 53219218
Alignment:
Q  163 ttattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    ||||||||||  |||||||||||||||||||||| |||||||    
T  53219177 ttattgacaaatcaataattaatgttgcattgaactttgaaa 53219218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 53599871 - 53599988
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| |||  ||||| || | | ||||||||  |||||||||   |||| || |||||  || |||||| ||||||||||||    
T  53599871 ctataatgaccttattcatttaatatcacatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaatatttaatgttgcat 53599970  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  53599971 tgaactttgaaagtgaca 53599988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 9220167 - 9220243
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||| ||||||||||  ||||||| |||||  || |||  | |||||||| ||||||| |||||||||||||    
T  9220167 tctctctctgcaataaatatctaagggtaatattggtaaaacatcatttaatgttacattgaactttgaaagtgaca 9220243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 19527334 - 19527410
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||| ||||||||||   |||| || |||||  || |||| | |||||||||||||||| |||||||||||||    
T  19527334 tctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 19527410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 26676785 - 26676714
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatat--gtgtgttttctataatatccttaatcatttattatttc 121  Q
    ||||||||| |||| |||||| |||||| | |  |||| |||||||||||| ||||| ||||||||||||||    
T  26676785 caaataaatgttgtcattttttatgaaattcttcgtgttttttctataatacccttactcatttattatttc 26676714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 42513120 - 42513228
Alignment:
Q  102 ccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttg 201  Q
    ||||| ||||||| |||  |||||||| | | ||||||||  |||||||||   |||| || |||||  || |||| | |||||||||||||||| ||||    
T  42513120 ccttattcatttaatatcacattttatatatttctctctccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg 42513219  T
Q  202 aaagtgaca 210  Q
    |||||||||    
T  42513220 aaagtgaca 42513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 48509950 - 48510014
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatat 153  Q
    ||||||||||||| |||||||||||| || ||||||| || | | ||||||| | ||||||||||    
T  48509950 ttttctataatattcttaatcatttaatacttcatttcatatatttctctctatgcaataaatat 48510014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 53691780 - 53691856
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||| || |||||||||||  ||||||| |||||| || |||| | |||||| || |||||| |||||||||||||    
T  53691780 tctctttccacaataaatatttaagggtaatattgataaaacaacatttaatgatgtattgaactttgaaagtgaca 53691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 55147187 - 55147263
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  ||||||||| | |||| || |||||  || |||| | |||||||||||||||| |||||||||||||    
T  55147187 tctctctccgcaataaataagtaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 55147263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 25773684 - 25773870
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  25773684 agaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 25773783  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  25773784 atttttctctatctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgataagt 25773870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 40886852 - 40886666
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  40886852 agaaattgcactaaccaagaaatcgaataaattttgttatttttgatgaaaatatgtgtgtattttctataatacccttaatcatttattatttcatttt 40886753  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40886752 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 40886666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 12807095 - 12806909
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  12807095 agaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 12806996  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  12806995 attttttcctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagagacaagt 12806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 30720734 - 30720548
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||| ||||||||||||||    
T  30720734 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttttataatacccttaatcatctattatttcatttt 30720635  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  30720634 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataactaatgttgcattgaaacttgaaagtgacaagt 30720548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 10285299 - 10285114
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  10285299 agaaattgcattaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 10285200  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10285199 atttttttctctctctacaataaatatgcaa-ggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 10285114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 31 - 213
Target Start/End: Complemental strand, 36561339 - 36561155
Alignment:
Q  31 aaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcattttat 128  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||||||||    
T  36561339 aaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacctttaaccatttattatttcattttat 36561240  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  36561239 ttttttctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgacaagt 36561155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 37900866 - 37900679
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||| |    
T  37900866 agaaattgcagtaaccaagaaactaaataaattttgatatttttgatgaaattatatgtgtgttttctataatacccttaaccatttattatttcattct 37900767  T
Q  127 atttttct-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| | | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37900766 attttttttcactctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagt 37900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 25683467 - 25683285
Alignment:
Q  32 aattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcattttatt 129  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||||| |||||||||||| ||| ||||    
T  25683467 aattgcaataaccaagaaaccaaataaattttgttatttttgataaaattatgtgtgtgttttctataatacccttaaccatttattattttattctatt 25683368  T
Q  130 tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  25683367 ttt-tctctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagt 25683285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 206
Target Start/End: Complemental strand, 7277664 - 7277486
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||| | |||| |||||||||||||||| |    
T  7277664 agaaattggagtaaccaataaaccaaataaattttgttatttttgatcaaattatgtgtgtgttttctataatacctttaaccatttattatttcattat 7277565  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagt 206  Q
    |||||| ||||| ||||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  7277564 attttt-tctctatctacaataaataagtaagggcattattgacaagacaataattaattttgcattgaaatttaaaagt 7277486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 53 - 211
Target Start/End: Original strand, 16054173 - 16054330
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    |||||||||||||||||||| |||||| | ||||| ||||||||||||||||| | |||||||||||| ||| |||| || |||||||||||||||||||    
T  16054173 aaataaattttgttattttttatgaaattttgtgttttttctataatatccttgaccatttattattttattctattatt-tctctctctacaataaata 16054271  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
       |||||||||||||||||   |||||||||||||||||||||| |||||||||||||    
T  16054272 gataagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaa 16054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 16983293 - 16983478
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttattttt--gatgaaa--atatgtgtgttttctataatatccttaatcatttattatttcatt 124  Q
    |||||||||| ||||||| ||||||||||| |||| || |||||  |||||||  |||||||| ||||||| |||| |||||| |||| ||||||| |||    
T  16983293 agaaattgcagtaaccaagaaaccaaataattttttttttttttttgatgaaatgatatgtgttttttctacaatacccttaaccatt-attattttatt 16983391  T
Q  125 tt-atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || ||||||   ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  16983392 tttattttt---tctctctgcaatagatatgcaagggtattattgaaaagacaataattaatgttgcattgaaacttaaaagtgacaagt 16983478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 30403191 - 30403018
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtg---tgttttctataatatccttaatcatttattatttcattttatttttctctct 138  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||   | ||||||||||||  ||||||||||| ||||||||||||||| || | |||    
T  30403191 accaagaaaccaaataaattttgttatttttgatgaaattctgtgtttttttttctataatactcttaatcatttgttatttcattttattatt-tttct 30403093  T
Q  139 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||| ||||||||    |||||||||||||||||  ||||||||||| ||| ||||||| || ||||||||||||    
T  30403092 ttcttcaataaatggataagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagt 30403018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 734556 - 734395
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgtttt-ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaa 150  Q
    |||||||||||||| ||| ||||||||| | | |||||||| |||||||| ||||| ||||||||||||||||| |||| || | |||||||| |||| |    
T  734556 caaataaattttgtcattattgatgaaattctttgtgtttttctataatacccttactcatttattatttcattctattatttt-tctctctataatata 734458  T
Q  151 tatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    || | ||| |||||||||| ||  ||||||||||||||| ||||||| |||||||||||||||    
T  734457 taggtaagagtattattgataaaccaataattaatgttgtattgaaacttgaaagtgacaagt 734395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 39070941 - 39071103
Alignment:
Q  52 caaataaattttgttatttttgatgaaaata--tgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    ||||||||| |||| |||||||||||||     ||||| |||||||||||| ||||| ||||||||||||||||| |||| || ||||||||||||||||    
T  39070941 caaataaatgttgtcatttttgatgaaatctgttgtgttttttctataatacccttactcatttattatttcattctattatt-tctctctctacaataa 39071039  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||| | ||| | |||||||| ||  ||||||||||||||||||||| | || ||||||||||||    
T  39071040 ataggtaagtggattattgataaaccaataattaatgttgcattgatacttaaaagtgacaagt 39071103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 23097880 - 23097780
Alignment:
Q  111 tttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||| ||| ||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||  ||||||| |||    
T  23097880 tttattattttattctatttttttctctct--acaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaaca 23097783  T
Q  211 agt 213  Q
    |||    
T  23097782 agt 23097780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 11797663 - 11797767
Alignment:
Q  110 atttattatttcattttatt-tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    ||||||||||||||| |||| ||||||| | ||||||||||||| |||||||||| ||||||||   |||||||||||||| |||||||||||||| |||    
T  11797663 atttattatttcattatattatttctctttatctacaataaataagcaagggtatcattgacaaactaataattaatgttgtattgaaatttgaaaatga 11797762  T
Q  209 caagt 213  Q
    |||||    
T  11797763 caagt 11797767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 11319656 - 11319772
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| ||||| ||||||||||||||||| |||| ||   ||||||||||||||||| | ||| |||||||| | ||  ||||||||||| ||    
T  11319656 ttttctataatacccttactcatttattatttcattctattatt---tctctctacaataaataggtaagagtattattaataaaccaataattaatatt 11319752  T
Q  189 gcattgaaatttgaaagtga 208  Q
    ||||| |||  |||||||||    
T  11319753 gcattaaaacctgaaagtga 11319772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 15629239 - 15629357
Alignment:
Q  96 taatatccttaatcatttattatttcattttatt-tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattg 194  Q
    ||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||| | |||  |||  |||| ||   ||||||||||| |||||||    
T  15629239 taatatccttaatcatttactatttcattatattatttttctctctctacaataaataggtaagtatatcgttgataaattaataattaatgctgcattg 15629338  T
Q  195 aaatttgaaagtgacaagt 213  Q
    |||||| ||| | ||||||    
T  15629339 aaatttaaaaataacaagt 15629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 18393052 - 18393169
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||| ||    
T  18393052 ctataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgtat 18393151  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  18393152 tgaactttgaaagtgaca 18393169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 1056756 - 1056684
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    |||||||||||||||||   ||| |||||||||||||   |||||||||||||||||||||| ||||||||||    
T  1056756 tctctctacaataaataaataagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtga 1056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 23098457 - 23098386
Alignment:
Q  48 aaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttatta 117  Q
    |||| ||||||||||||||||||||||||||| ||||||  ||||| |||||||| |||||| |||||||||    
T  23098457 aaactaaataaattttgttatttttgatgaaattatgtgcatgtttcctataatacccttaaccatttatta 23098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 25786044 - 25785928
Alignment:
Q  94 tataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 193  Q
    ||||||| ||||  ||||||| ||| |||||| || | | |||||||||||||||||||  |||||||| || || ||| |||| | ||||||||| |||    
T  25786044 tataataaccttcctcatttaatatctcatttcatatatttctctctctacaataaataatcaagggtaataatgccaaaacaacatttaatgttgtatt 25785945  T
Q  194 gaaatttgaaagtgaca 210  Q
    ||| |||||||||||||    
T  25785944 gaactttgaaagtgaca 25785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 1056498 - 1056402
Alignment:
Q  54 aataaattttgttatttttgatgaaaatatgtgtg-ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    ||||||||||||||||||| |||||| | | |||| ||||||||||||   || |||||||||||||||||| |||| ||   |||||||||||||||||    
T  1056498 aataaattttgttatttttaatgaaattctttgtgtttttctataatactattgatcatttattatttcattatattatt---tctctctacaataaata 1056402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 12305687 - 12305736
Alignment:
Q  155 caagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  12305687 caagggtattattgacaaaacaataatcaatgttgcattgaactttgaaa 12305736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 39893890 - 39894007
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||  || |||||| ||||||||||||    
T  39893890 ctataatgaccttattaatttaatatttcatttcatatgtttctctctccgcaataaatatttaagggtaatattggtaaaacaatatttaatgttgcat 39893989  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| ||| |||||||||    
T  39893990 tgaactttaaaagtgaca 39894007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 12784540 - 12784640
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||  || |||| ||||| |||||||||||| ||||||||||||    
T  12784540 atttaatatttcatttcatatgtttctctctccgcaataaatatataagggtaatattggtaaaacaacaattagtgttgcattgaactttgaaagtgac 12784639  T
Q  210 a 210  Q
    |    
T  12784640 a 12784640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 4609159 - 4609045
Alignment:
Q  96 taatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 195  Q
    ||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  ||| |||| ||  | ||| |||| | ||||||||| |||||    
T  4609159 taataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaaaggtaataaaggcaaaacaacatttaatgttgtattga 4609060  T
Q  196 aatttgaaagtgaca 210  Q
    | |||||||||||||    
T  4609059 actttgaaagtgaca 4609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 7466320 - 7466202
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||  || ||| || ||||||||||||    
T  7466320 ctataatgaccttattaatttaatatttcatttcatatgtttctctctccgcaataaatatctaagggtaatattggtaaaacactatttaatgttgcat 7466221  T
Q  193 tgaaatttgaaagtgacaa 211  Q
    |||| ||||||||| ||||    
T  7466220 tgaagtttgaaagtaacaa 7466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 4175561 - 4175678
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   ||||  | |||||| || |||| | ||||||||||||    
T  4175561 ctataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggacaatattgataaaacaacatttaatgttgcat 4175660  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  4175661 tgaactttgaaagtgaca 4175678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 4985256 - 4985373
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| | |||| || | | ||||||||  |||||||||   ||||||| |||||| || ||| || ||||||||||||    
T  4985256 ctataatgaccttattcatttaatatcttatttcatatatttctctctcctcaataaataattaagggtaatattgataaaacattatttaatgttgcat 4985355  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  4985356 tgaactttgaaagtgaca 4985373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 12723057 - 12723158
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||  || |||| ||||| |||||||||||| ||| ||||||||    
T  12723057 atttaatatttcatttcatatgtttctctctccgcaataaatatataagggtaatattggtaaaacaacaattagtgttgcattgaactttaaaagtgac 12723156  T
Q  210 aa 211  Q
    ||    
T  12723157 aa 12723158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 32389124 - 32389007
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||| ||||  ||||||||||  ||||||| |||||  || |||| | ||||||||||||    
T  32389124 ctataatggccttattaatttaatatttcatttcatatgtttctttctccgcaataaatatctaagggtaatattggtaaaacaacatttaatgttgcat 32389025  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  32389024 tgaactttgaaagtgaca 32389007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 7408469 - 7408351
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| |||||| || | | | |||||| | |||||||| | ||| ||| |||||  || |||||| ||||| |||| |    
T  7408469 ctataataaccttattcatttaatatctcatttcatatatttttctctccataataaataagtaagagtaatattggtaaaacaatatttaatattgctt 7408370  T
Q  193 tgaaatttgaaagtgacaa 211  Q
    |||| ||||||||||||||    
T  7408369 tgaactttgaaagtgacaa 7408351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 19831617 - 19831736
Alignment:
Q  87 tgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatg 186  Q
    ||||| |||||||  ||||| ||||||| ||| |||||| || ||||||| ||   ||||||||||   ||||||| |||||  || |||| | ||||||    
T  19831617 tgtttactataatgaccttattcatttaatatctcatttaatatttctctttcc--acaataaatagttaagggtaatattggtaaaacaacatttaatg 19831714  T
Q  187 ttgcattgaaatttgaaagtga 208  Q
    |||||||||| |||||||||||    
T  19831715 ttgcattgaactttgaaagtga 19831736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 21150587 - 21150513
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||||||||||  |||||||| ||  |  || |||| | |||||||||||||||| |||||||||||||    
T  21150587 tctctctacaataaataatcaagggtaataaaggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 21150513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 21157728 - 21157654
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||||||||||  |||||||| ||  |  || |||| | |||||||||||||||| |||||||||||||    
T  21157728 tctctctacaataaataatcaagggtaataaaggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 21157654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 33239417 - 33239347
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    ||||||| | |||||||||   || ||| |||||||||| |||| |||||||||||||||||| |||||||    
T  33239417 tctctctttgcaataaatacttaaaggtgttattgacaaaacaaaaattaatgttgcattgaactttgaaa 33239347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 9076209 - 9076092
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   ||||  | |||||| || |||| | ||||||||||||    
T  9076209 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggacaatattgataaaacaacatttaatgttgcat 9076110  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  9076109 tgaactttgaaagtgaca 9076092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 18437404 - 18437521
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||||||| |||||| || | | |||||||| | ||||||||   ||||||| |||||  || |||| | |||||||| |||    
T  18437404 ctataataaccttatttatttattatctcatttcatatatttctctctccataataaataactaagggtaatattggtaaaacaacatttaatgttacat 18437503  T
Q  193 tgaaatttgaaagtgaca 210  Q
    || | |||||||||||||    
T  18437504 tggattttgaaagtgaca 18437521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 18465798 - 18465725
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtg 207  Q
    |||||||| ||||||||||   |||| || |||||  || |||||| |||||||||||||||| ||||||||||    
T  18465798 tctctctccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaactttgaaagtg 18465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 1297900 - 1297936
Alignment:
Q  174 acaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| |||||||||||||||| |||||||||||||    
T  1297900 acaatatttaatgttgcattgaattttgaaagtgaca 1297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 11795392 - 11795344
Alignment:
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||||||||    
T  11795392 gtattattgataaacctataattaatgttgcattgaaacttgaaagtga 11795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 36239555 - 36239479
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  |||||||||   ||||||| |||||| || |||  | |||||||||||||||| |||||||||||||    
T  36239555 tctctctccgcaataaataattaagggtaatattgataaaacatcatttaatgttgcattgaactttgaaagtgaca 36239479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 37809856 - 37809780
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||| ||||||||||  ||||||| |||||  || |||  | ||||||||||| |||| |||||||||||||    
T  37809856 tctctctctgcaataaatatataagggtaatattggtaaaacatcatttaatgttgcaatgaactttgaaagtgaca 37809780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 42911607 - 42911571
Alignment:
Q  174 acaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| |||||||||||||||| |||||||||||||    
T  42911607 acaatatttaatgttgcattgaactttgaaagtgaca 42911571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 23366824 - 23367010
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  23366824 agaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 23366923  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23366924 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagt 23367010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 39938205 - 39938391
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  39938205 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 39938304  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  39938305 atttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattaaaacttaaaagtgacaagt 39938391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 3518906 - 3519128
Alignment:
Q  1 aatactccctccgtttcaaaatacgtgt---------agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt-- 89  Q
    |||||||||||||||||||||||| |||         |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||      
T  3518906 aatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgt 3519005  T
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3519006 tttctataatacccttaataatttattatttcattttattttt-tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtta 3519104  T
Q  190 cattgaaatttgaaagtgacaagt 213  Q
    |||||||| |||||||||||||||    
T  3519105 cattgaaacttgaaagtgacaagt 3519128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 1646324 - 1646508
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttat 128  Q
    ||||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1646324 agaaattgcagcaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttcattttat 1646423  T
Q  129 ttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| ||||    
T  1646424 ttttttctctctctacaataaatatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagt 1646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 1102538 - 1102718
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  1102538 agaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaaccatttattatttcatttt 1102637  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  1102638 atttttttctc--tctacaataaatatgcaagggtgttattgacaagacaataattaatgttgcattgaaacttgaaagtgac 1102718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 37673979 - 37673799
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgt--gtgttttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  |||||    
T  37673979 agaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatt--atttt 37673882  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37673881 ttttt----tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttggaagtgacaagt 37673799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 12969981 - 12969799
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |  ||||||||||| |||||| |||||||||||| ||| |    
T  12969981 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtatattttctataatacccttaaccatttattattttattct 12969882  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  12969881 attttt-tctctctctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaacttgaaagagaca 12969799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 22388335 - 22388194
Alignment:
Q  71 ttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattg 168  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  22388335 ttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcattttattttt---tctctctacaataaatatgcaagggtattattg 22388239  T
Q  169 acaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  22388238 acaagacaataattaatgttgcattgaaacttgaaagtgacaagt 22388194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 39562104 - 39561944
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaat 151  Q
    ||||||||||||||||||||||| |||| ||| | |||||| | ||||| |||||| |||||||||||  ||| |||| ||   ||||||||||||||||    
T  39562104 caaataaattttgttatttttgaagaaattatttttgttttttctaatacccttaaccatttattattgtattctattatt---tctctctacaataaat 39562008  T
Q  152 atgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagtga 215  Q
    | | |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  39562007 aagtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaagtga 39561944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 4917839 - 4917982
Alignment:
Q  69 ttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattg 168  Q
    ||||||| ||| ||||||| ||||||||||||  |||||| ||||||||||||||| |||| || |||| |||||| ||||||| | ||||| | |||||    
T  4917839 ttttgataaaattatgtgttttttctataataatcttaattatttattatttcattctattatt-tctcactctaccataaataggtaagggaactattg 4917937  T
Q  169 acaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||| ||||||||||||||| ||| ||||| |||||||||||||    
T  4917938 acaagccaataattaatgttgaattaaaattcgaaagtgacaagt 4917982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 14779838 - 14779996
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaata 152  Q
    ||||||||||| ||||||||||||||| ||| |||||||| | ||  || |||| ||||||||||||||||| |||| || ||| |||||||| ||||||    
T  14779838 aaataaatttttttatttttgatgaaattatttgtgttttttctataatacttactcatttattatttcattatattatt-tctttctctacagtaaata 14779936  T
Q  153 tgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
     ||||||||||| || ||||   |||  ||||| ||||||||||| |||||||||||||||    
T  14779937 ggcaagggtatt-ttaacaaacaaatcgttaatcttgcattgaaacttgaaagtgacaagt 14779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 213
Target Start/End: Original strand, 19976380 - 19976549
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgtttt-ctataatatccttaatcatttattatttcattttatttttctctctct 140  Q
    ||||| ||| ||||||||||||| || ||||||| ||| ||||||| |||| |||||||| |||||   ||||||||||| ||| |||| |   ||||||    
T  19976380 accaagaaatcaaataaattttggtacttttgataaaattatgtgtttttttctataatacccttacctatttattattttattatattat---ctctct 19976476  T
Q  141 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||   || | ||||||||| ||   |||||||||||||||||||||| |||||||||||||||    
T  19976477 ctacaataaatagataatgatattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagt 19976549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 1002949 - 1002787
Alignment:
Q  52 caaataaattttgttatttttgatgaaaata--tgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataa 149  Q
    |||||||||||| ||||||||||||||| |   | ||| ||||| | |||| | ||| ||||||||||||||||| |||| || ||||||||||||||||    
T  1002949 caaataaattttattatttttgatgaaattccttttgttttttcgacaataacattactcatttattatttcattctattatt-tctctctctacaataa 1002851  T
Q  150 atatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||   |||| ||| ||| | ||  ||||||||||||||||||||| |||||||| ||||||||    
T  1002850 atagataaggatataattaataaaccaataattaatgttgcattgagatttgaaaatgacaagt 1002787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 34242040 - 34242191
Alignment:
Q  57 aaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgca 156  Q
    ||||||||||||||||||||||| | ||||| |||| | ||| | |||||  |||||||||||||||| | || || ||||||||||||||||||| | |    
T  34242040 aaattttgttatttttgatgaaattctgtgttttttttgtaacacccttacccatttattatttcattatgttatt-tctctctctacaataaataggta 34242138  T
Q  157 agggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||| ||||||||| ||  ||||| ||||| ||||||| ||| || ||||||||    
T  34242139 aggatattattgataaaccaatatttaatattgcattaaaacttaaaagtgac 34242191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 28110220 - 28110151
Alignment:
Q  144 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||||||||||||| |||||| ||||||||    
T  28110220 caataaatatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagt 28110151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 28401468 - 28401396
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtga 208  Q
    ||||| |||||||| || |||||||||||||||||||  ||||||||||||| || |||||| ||||||||||    
T  28401468 tctctttacaataattaggcaagggtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 37284737 - 37284574
Alignment:
Q  44 caataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctcta 143  Q
    ||||||| ||||||||||||||||||||| || ||| |  |||| ||||||||||||   ||||  |||||||  |||||| ||| ||    ||||||||    
T  37284737 caataaatcaaataaattttgttattttttataaaattgcgtgt-ttttctataatacatttaactatttattgcttcattctatatt----tctctcta 37284643  T
Q  144 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||| | ||| |||||| ||| ||  |||||| |||||||||||||||| |||||| ||||||||    
T  37284642 caataaataggtaagagtattagtgataaatcaataa-taatgttgcattgaaacttgaaaatgacaagt 37284574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 40757024 - 40756969
Alignment:
Q  156 aagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||    
T  40757024 aagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaa 40756969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 32840394 - 32840273
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtgt-----tttctataatatccttaatcatttattatttcattttatttttctctctctctacaa 146  Q
    |||||||||||||||||||||||||||| | ||||| |     ||||||||||| | |||   ||||||||||||||| |||| || ||||||| || ||    
T  32840394 caaataaattttgttatttttgatgaaattctgtgtttttttctttctataataccattatcgatttattatttcattctattatt-tctctctgtaaaa 32840296  T
Q  147 taaatatgcaagggtattattga 169  Q
    |||||| | ||||||||||||||    
T  32840295 taaataagtaagggtattattga 32840273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 9370130 - 9370013
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| | ||||| |||||||||| || | | ||||||||  ||||||||||  ||||||| |||||| || |||| | ||||| ||||||    
T  9370130 ctataatgaccttattaatttaatatttcatttcatatgtttctctctccgcaataaatatttaagggtaatattgataaaacaacacttaatattgcat 9370031  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  9370030 tgaactttgaaagtgaca 9370013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 13754111 - 13753994
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| |||||||| | || | | ||||||||  |||||||||   ||||||| |||||| || |||| | ||||||||| ||    
T  13754111 ctataatagccttattcatttaatatttcatgtcatatatttctctctccgcaataaataactaagggtaatattgataaaacaacatttaatgttgtat 13754012  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  13754011 tgaactttgaaagtgaca 13753994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 18078104 - 18078215
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaatcatttattatttcattttatttttctctctc 139  Q
    ||||| ||| |||||||||||||||||||||||||||  | | ||||  ||||||||||||  ||| | ||||||||| |||||| |||| || | ||||    
T  18078104 accaaaaaatcaaataaattttgttatttttgatgaatttttttgtggattttctataatactcttgaccatttattaattcattctattatt-tttctc 18078202  T
Q  140 tctacaataaata 152  Q
    |||||||||||||    
T  18078203 tctacaataaata 18078215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 28967318 - 28967435
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   ||||||||||| |||||||  |||||||| ||  | ||| |||| | ||||||||| ||    
T  28967318 ctataataacctttatcatttaatatctcatttcatttacttctctctctacgataaataatcaagggtaataaaggcaaaacaacatttaatgttgtat 28967417  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  28967418 tgaactttgaaagtgaca 28967435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 13849819 - 13849919
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||| ||||||||||  || |||| |||||| || |||| | |||||| ||||||||| ||||||||||||    
T  13849819 atttaatatttcatttcatatgtttctctctctgcaataaatatctaaaggtaatattgataaaacaacatttaatgatgcattgaactttgaaagtgac 13849918  T
Q  210 a 210  Q
    |    
T  13849919 a 13849919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 43077407 - 43077331
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  ||||||||||  ||||||| |||||  || |||||| |||||||||||||||| |||||||||||||    
T  43077407 tctctctccgcaataaatatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 14117814 - 14117660
Alignment:
Q  57 aaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgca 156  Q
    ||||||||||| ||||||||||| ||||| | ||| ||||||||  |||||  ||||||||| | |||| || | | | |||||||  |||||| |   |    
T  14117814 aaattttgttacttttgatgaaattatgtctttttcctataatactcttaagtatttattatcttatttcatctatttatctctctggaataaacagtta 14117715  T
Q  157 agggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaa 211  Q
    |||||||||||||||| | || | |||| ||| ||||||| ||||||| ||||||    
T  14117714 agggtattattgacaaaataacagttaacgttacattgaactttgaaaatgacaa 14117660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 479060 - 479177
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||| || |||| | ||||||||||||    
T  479060 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattgataaaacaacatttaatgttgcat 479159  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  479160 tgaactttgaaagtgaca 479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 20668387 - 20668322
Alignment:
Q  42 accaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaa 107  Q
    ||||||||| | |||||||| ||||| |||||||||||||| || | ||| |||||||||||||||    
T  20668387 accaataaaactaataaattctgttacttttgatgaaaatacgtctttttcctataatatccttaa 20668322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 35179153 - 35179097
Alignment:
Q  53 aaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaa 107  Q
    ||||||||||||||||||||||||||| | ||||||  |||||||||||| ||||||    
T  35179153 aaataaattttgttatttttgatgaaattttgtgtgttttttctataataaccttaa 35179097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 11222412 - 11222520
Alignment:
Q  102 ccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttg 201  Q
    ||||| ||||||| ||| |||||| || | | ||||||||| |||||||||   |||| || |||||  || |||| | |||||||||||||||| ||||    
T  11222412 ccttattcatttaatatctcatttcatatatttctctctctgcaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg 11222511  T
Q  202 aaagtgaca 210  Q
    |||||||||    
T  11222512 aaagtgaca 11222520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 32323746 - 32323698
Alignment:
Q  156 aagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||||||    
T  32323746 aagggtatttttgacaaaacaataattgatgttgcattgaactttgaaa 32323698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 32854884 - 32854984
Alignment:
Q  110 atttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    ||||| |||||||||| || | | ||||||||  ||||||| ||  ||||||| |||||  || |||| | |||||||||||||||| ||||||||||||    
T  32854884 atttaatatttcatttcatatgtttctctctccgcaataaacatctaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgac 32854983  T
Q  210 a 210  Q
    |    
T  32854984 a 32854984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 34399358 - 34399243
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||||| ||||||||||||    
T  34399358 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaatatttaatgttgcat 34399259  T
Q  193 tgaaatttgaaagtga 208  Q
    |||| |||||||||||    
T  34399258 tgaactttgaaagtga 34399243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 34357334 - 34357216
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| ||||||||| | | ||||| || ||| ||||||   |||| || |||||  || |||| | ||||||||||||    
T  34357334 ctataatgaccttattcatttaatatctcattttatatatttctctttccacagtaaataactaaggataatattggtaaaacaacatttaatgttgcat 34357235  T
Q  193 tgaaatttgaaagtgacaa 211  Q
    |||| ||||||||||||||    
T  34357234 tgaactttgaaagtgacaa 34357216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 10812355 - 10812238
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||  ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  10812355 ctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataattaaggataatattggtaaaacaacatttaatgttgcat 10812256  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  10812255 tgaactttgaaagtgaca 10812238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 13000998 - 13001115
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| | ||||| ||| |||||| || | | ||||||||  |||||||||   ||||||| || ||| || |||| | |||| |||||||    
T  13000998 ctataatagccttatttatttaatatctcatttcatatatttctctctccgcaataaataactaagggtaatactgataaaacaagatttaaagttgcat 13001097  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  13001098 tgaactttgaaagtgaca 13001115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 15893667 - 15893784
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| ||||| ||||||| ||| |||||| || | | ||||||||  |||||||||   |||| || |||||  || |||| | ||||||||||||    
T  15893667 ctataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcat 15893766  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| ||||||| |||||    
T  15893767 tgaactttgaaaatgaca 15893784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 25787493 - 25787424
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggta 162  Q
    |||||||||||||||||||||| || ||||||| || | | ||||||| | ||||||||||  |||||||    
T  25787493 ctataatatccttaatcatttaatacttcatttcatatatttctctctatgcaataaatatataagggta 25787424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 32839022 - 32838985
Alignment:
Q  176 aataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  32839022 aataattaatattgcattgaaacttgaaagtgacaagt 32838985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 36447426 - 36447475
Alignment:
Q  160 gtattattgacaagacaataattaatgttgcattgaaatttgaaagtgac 209  Q
    |||||||||| ||  ||||||||||  |||||||||||||||||||||||    
T  36447426 gtattattgataaaccaataattaacattgcattgaaatttgaaagtgac 36447475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 37077330 - 37077209
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| |||| || ||||| ||| |||||| || | | ||||| ||| |||||||||  ||| |||| || |||||| | || | ||||||||    
T  37077330 ttttctataataaccttcataatttaatatctcatttcatatatttctctatctgcaataaataaccaatggtaataatgacaaaataacatttaatgtt 37077231  T
Q  189 gcattgaaatttgaaagtgaca 210  Q
    | |||||| ||||||| |||||    
T  37077230 gtattgaactttgaaaatgaca 37077209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 45065232 - 45065115
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    |||||||||||| | || |||||||| ||| | |||| ||||   ||||||| |||||||||||  |||||||| ||  | ||| |||| | ||||||||    
T  45065232 ttttctataataacattcatcatttaatatcttatttcatttacttctctctttacaataaataatcaagggtaataaaggcaaaacaacatttaatgtt 45065133  T
Q  189 gcattgaaatttgaaagt 206  Q
    | |||||| |||||||||    
T  45065132 gtattgaactttgaaagt 45065115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 15677419 - 15677495
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  |||||||||   |||| || |||||| || | |||| |||||||||||||||| |||||||||||||    
T  15677419 tctctctccgcaataaataactaaggataatattgataaaataatatttaatgttgcattgaactttgaaagtgaca 15677495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 16021916 - 16021848
Alignment:
Q  136 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaa 204  Q
    |||||||||||||| ||   || |||||||||||||| |||||| ||| |||| ||||||| |||||||    
T  16021916 tctctctacaataattagttaaaggtattattgacaaaacaatagttattgttccattgaactttgaaa 16021848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 44360548 - 44360473
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||  ||||||||||  |||||||| ||||| || |||  | |||||||||||||||| |||||||||||||    
T  44360548 tctctctccgcaataaatatttaagggtat-attgataaaacatcatttaatgttgcattgaactttgaaagtgaca 44360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 45397302 - 45397338
Alignment:
Q  83 tgtgtgttttctataatatccttaatcatttattatt 119  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  45397302 tgtgttttttctataatatccttaataatttattatt 45397338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 217 - 382
Alignment:
Q  49 aaccaaataaattttgttatttttgatgaaaatatgtg--tgttttctataatatccttaatcatttattatttcattttatttttctctctctctacaa 146  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  217 aaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatacccttaaccatttattatttcattttatttttttctctctctacaa 316  T
Q  147 taaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  317 taaatatgcaagggtattattgacaagacaat-attaatgttgcattgaaacttgaaagtgacaagt 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 141 - 1
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatatccttaatcatttattatttcatttt 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  141 agaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcatttt 42  T
Q  127 atttttctctctctctacaataaatatgcaagggtattatt 167  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  41 atttttttctctctctacaataaatatgcaagggtattatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 504 - 323
Alignment:
Q  30 gaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataatatccttaatcatttattatttcattttatt 129  Q
    ||||||||| ||| ||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  504 gaaattgcagtaatcaaaaaatcaaataaattttgttatttttgataaaattatgtgtgttttttataatacccttaatcatttattatttcattctatt 405  T
Q  130 tttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||  |||||||||||||||| || | ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  404 tttctct--ctctacaataaatatgtaatgatattattgacaagacaataattaatgttgcattaaaatttaaaagtgacaagt 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 45489 - 45671
Alignment:
Q  29 agaaattgcactaaccaataaaccaaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaatcatttattatttcatttt 126  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||| |||||||||||| ||| |    
T  45489 agaaattgcaccaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccatttattattttattct 45588  T
Q  127 atttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||| ||||| ||||||||||||||  |||| ||||||||| || |||||||||||| ||||||||||||||||||| ||||    
T  45589 attttt-tctctttctacaataaatatttaaggttattattgataatacaataattaatattgcattgaaatttgaaagagaca 45671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 65375 - 65221
Alignment:
Q  60 ttttgttatttttgatgaaaatatgtgtgtttt---ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgca 156  Q
    |||| ||||||||||||||| ||| ||||||||   |||||||| |||||| |||||||||||||||| ||||||| ||||| |||||| ||||||   |    
T  65375 ttttattatttttgatgaaattatatgtgtttttttctataatacccttaaccatttattatttcattctattttt-tctctttctaca-taaatagata 65278  T
Q  157 agggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||    
T  65277 agggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagt 65221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 7788 - 7889
Alignment:
Q  111 tttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||||||||| |||| || ||||||| ||||||||||| | ||| |||||||||||||  | ||||||||||||||||| ||| ||||||||||||    
T  7788 tttattatttcattctattgtt-tctctctttacaataaataggtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgaca 7886  T
Q  211 agt 213  Q
    |||    
T  7887 agt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 252750 - 252633
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  |||||||| ||  ||||| |||||| ||||||||| ||    
T  252750 ctataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaagggtaataaagacaaaacaatatttaatgttgtat 252651  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  252650 tgaactttgaaagtgaca 252633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 7079 - 6972
Alignment:
Q  89 ttttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 188  Q
    ||||||||||||  |||||| | ||||||||| ||| |||| || | ||||||||||||||||| | ||| |||||||||||| | ||||||||||||||    
T  7079 ttttctataatacacttaattaattattattttattatattatttt-tctctctacaataaataagtaagagtattattgacacgtcaataattaatgtt 6981  T
Q  189 gcattgaaa 197  Q
    |||||||||    
T  6980 gcattgaaa 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 15499 - 15386
Alignment:
Q  90 tttctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 189  Q
    ||||||| ||| |||||| ||||||||||||||||  ||| ||   ||||||||||||||| | | ||| |||||||||||||  | |||||||||||||    
T  15499 tttctattatacccttaaccatttattatttcattcaattatt---tctctctacaataaaaaagtaagcgtattattgacaaaccgataattaatgttg 15403  T
Q  190 cattgaaatttgaaagt 206  Q
    |||||||| || |||||    
T  15402 cattgaaacttaaaagt 15386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 23292 - 23175
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| ||||||||| | | | ||||||  |||||||||  |||||||| || |||||| |||| | ||||||||| ||    
T  23292 ctataataacctttatcatttaatatctcattttatatatttttctctcggcaataaataaccaagggtaataatgacaaaacaacatttaatgttgtat 23193  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  23192 tgaactttgaaagtgaca 23175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 96146 - 96263
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||| ||    
T  96146 ctataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgtat 96245  T
Q  193 tgaaatttgaaagtgaca 210  Q
    |||| |||||||||||||    
T  96246 tgaactttgaaagtgaca 96263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 14335 - 14451
Alignment:
Q  93 ctataatatccttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 192  Q
    |||||||| |||| |||||||| ||| |||||| ||||   |||||||||||||||||||  |||||||| ||  ||||| |||| | ||||||||| ||    
T  14335 ctataataaccttcatcatttaatatctcatttcatttacttctctctctacaataaataatcaagggtaataaagacaaaacaacatttaatgttgtat 14434  T
Q  193 tgaaatttgaaagtgac 209  Q
    |||| ||||||| ||||    
T  14435 tgaactttgaaaatgac 14451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 70882 - 70961
Alignment:
Q  52 caaataaattttgttatttttgatgaaaatatgtgtg--ttttctataatatccttaatcatttattatttcattttatt 129  Q
    |||||||||||||||||||||||||||| | ||||||  |||||| ||| | |||||| |||||||||||||||| ||||    
T  70882 caaataaattttgttatttttgatgaaattctgtgtgttttttctgtaacacccttaaccatttattatttcattctatt 70961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 71225 - 71304
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    ||||| ||||||||||||| | |||||||| ||| ||||  ||||||||||| ||||||| ||| || ||||||||||||    
T  71225 tctctatctacaataaataggtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagt 71304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 147254 - 147330
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||  |||||||||||  ||||||| |||||| || |||| | |||||||||||||||| |||||||||||||    
T  147254 tctctcttcacaataaatatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 234399 - 234333
Alignment:
Q  145 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgacaagt 213  Q
    |||||||||  ||| ||||||||||||| ||| |||||||||||||||  || ||||||| ||||||||    
T  234399 aataaatatttaagagtattattgacaaaacagtaattaatgttgcat--aactttgaaaatgacaagt 234333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 30818 - 30894
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    ||||||||| ||||||||||  ||||||| |||||  || |||  | |||||||| ||||||| |||||||||||||    
T  30818 tctctctctgcaataaatatctaagggtaatattggtaaaacatcatttaatgttacattgaactttgaaagtgaca 30894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 213
Target Start/End: Original strand, 10856 - 10963
Alignment:
Q  103 cttaatcatttattatttcattttatttttctctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttga 202  Q
    |||| ||||||||||||||| | |||| ||   |||||| |||||||||| | |||  ||||||||||||  ||||| ||||||||||||  ||| || |    
T  10856 cttagtcatttattatttcactatattatt---tctctccacaataaataggtaagaatattattgacaaatcaatatttaatgttgcatataaacttaa 10952  T
Q  203 aagtgacaagt 213  Q
    | |||||||||    
T  10953 atgtgacaagt 10963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 49262 - 49186
Alignment:
Q  134 tctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaatttgaaagtgaca 210  Q
    |||||||| ||||||||||   |||| || |||||  || |||| | |||||||||||||||| |||||||||||||    
T  49262 tctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 49186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University