View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5086_low_27 (Length: 262)

Name: NF5086_low_27
Description: NF5086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5086_low_27
NF5086_low_27
[»] chr7 (40 HSPs)
chr7 (113-262)||(735151-735300)
chr7 (23-112)||(7389389-7389478)
chr7 (23-114)||(19329840-19329931)
chr7 (23-114)||(35137531-35137622)
chr7 (23-113)||(38267039-38267129)
chr7 (23-112)||(4999525-4999614)
chr7 (23-112)||(8080394-8080483)
chr7 (23-112)||(36361924-36362013)
chr7 (23-109)||(3783998-3784084)
chr7 (23-112)||(3434562-3434651)
chr7 (23-112)||(36362026-36362115)
chr7 (23-112)||(38837217-38837306)
chr7 (26-112)||(19436201-19436287)
chr7 (23-112)||(40957707-40957796)
chr7 (23-114)||(8238210-8238302)
chr7 (23-114)||(3694365-3694456)
chr7 (23-112)||(46374813-46374902)
chr7 (23-111)||(32951504-32951592)
chr7 (23-114)||(21234399-21234490)
chr7 (23-112)||(38044197-38044286)
chr7 (23-107)||(35522881-35522965)
chr7 (46-112)||(10343597-10343663)
chr7 (23-113)||(39255935-39256024)
chr7 (47-112)||(22343361-22343426)
chr7 (23-112)||(36208173-36208262)
chr7 (23-112)||(41915741-41915830)
chr7 (23-112)||(11044188-11044267)
chr7 (23-112)||(18207180-18207268)
chr7 (23-112)||(26296644-26296733)
chr7 (51-112)||(35468894-35468955)
chr7 (23-112)||(40846124-40846213)
chr7 (23-112)||(46033812-46033901)
chr7 (47-113)||(32564461-32564527)
chr7 (23-112)||(7727906-7727995)
chr7 (56-114)||(31735882-31735940)
chr7 (30-107)||(2318261-2318338)
chr7 (33-112)||(12310906-12310983)
chr7 (43-111)||(32045838-32045906)
chr7 (33-71)||(16374845-16374883)
chr7 (23-113)||(41423681-41423771)
[»] chr3 (37 HSPs)
chr3 (23-116)||(53982007-53982100)
chr3 (23-113)||(33644199-33644289)
chr3 (22-112)||(54868905-54868995)
chr3 (23-112)||(49607414-49607503)
chr3 (23-107)||(52629305-52629389)
chr3 (23-112)||(8076393-8076482)
chr3 (23-112)||(17470405-17470494)
chr3 (23-112)||(27714902-27714991)
chr3 (36-112)||(11095377-11095453)
chr3 (23-111)||(31456690-31456778)
chr3 (23-108)||(48587102-48587187)
chr3 (23-115)||(26141543-26141635)
chr3 (33-112)||(33118872-33118951)
chr3 (27-112)||(36707439-36707524)
chr3 (31-112)||(35536626-35536707)
chr3 (23-107)||(26754700-26754784)
chr3 (30-112)||(24699972-24700054)
chr3 (23-112)||(41189775-41189864)
chr3 (23-113)||(30801744-30801834)
chr3 (47-112)||(14623874-14623939)
chr3 (30-112)||(11347940-11348022)
chr3 (23-113)||(20764926-20765016)
chr3 (31-112)||(8956762-8956843)
chr3 (23-112)||(9562999-9563088)
chr3 (23-112)||(51419371-51419460)
chr3 (31-111)||(13898074-13898154)
chr3 (47-113)||(45058588-45058653)
chr3 (23-112)||(11907371-11907460)
chr3 (23-112)||(47531865-47531954)
chr3 (44-109)||(25407179-25407245)
chr3 (30-112)||(41080709-41080790)
chr3 (44-112)||(35965806-35965874)
chr3 (23-90)||(36331340-36331407)
chr3 (47-105)||(35093592-35093650)
chr3 (50-112)||(36331416-36331478)
chr3 (26-107)||(42823116-42823197)
chr3 (23-112)||(48375717-48375806)
[»] chr8 (31 HSPs)
chr8 (23-114)||(504132-504223)
chr8 (23-112)||(14547922-14548011)
chr8 (23-114)||(15197331-15197422)
chr8 (23-112)||(12831047-12831136)
chr8 (26-115)||(23122611-23122700)
chr8 (23-115)||(34012307-34012399)
chr8 (23-113)||(40423954-40424044)
chr8 (22-111)||(5957831-5957920)
chr8 (23-112)||(37038479-37038568)
chr8 (23-112)||(1179951-1180040)
chr8 (23-112)||(44507098-44507187)
chr8 (23-112)||(10284642-10284731)
chr8 (23-113)||(15048193-15048282)
chr8 (23-93)||(8841443-8841513)
chr8 (23-107)||(10621098-10621182)
chr8 (23-114)||(43414592-43414683)
chr8 (23-112)||(16383377-16383466)
chr8 (44-115)||(20074966-20075037)
chr8 (23-111)||(9122196-9122274)
chr8 (23-112)||(34307216-34307305)
chr8 (29-112)||(14055609-14055692)
chr8 (23-112)||(4854874-4854963)
chr8 (23-112)||(17443825-17443914)
chr8 (23-112)||(24307804-24307893)
chr8 (47-112)||(30479509-30479574)
chr8 (49-112)||(24307629-24307692)
chr8 (29-112)||(42221515-42221598)
chr8 (23-112)||(15258940-15259029)
chr8 (23-112)||(16056412-16056501)
chr8 (47-112)||(32032725-32032789)
chr8 (33-70)||(38229470-38229507)
[»] chr1 (33 HSPs)
chr1 (23-113)||(9474887-9474977)
chr1 (23-113)||(48716293-48716383)
chr1 (23-112)||(2581915-2582004)
chr1 (23-115)||(27564746-27564838)
chr1 (23-112)||(3000319-3000408)
chr1 (23-112)||(8346399-8346488)
chr1 (23-112)||(38632332-38632421)
chr1 (23-118)||(44548387-44548482)
chr1 (23-114)||(47452331-47452422)
chr1 (23-112)||(38595154-38595243)
chr1 (23-112)||(51898694-51898783)
chr1 (23-112)||(50630458-50630547)
chr1 (23-112)||(32813247-32813336)
chr1 (23-112)||(41758805-41758894)
chr1 (23-112)||(43132-43221)
chr1 (23-118)||(26274426-26274521)
chr1 (35-114)||(37649196-37649275)
chr1 (23-111)||(11152389-11152476)
chr1 (23-113)||(50591011-50591101)
chr1 (23-112)||(5959011-5959100)
chr1 (23-92)||(45044571-45044640)
chr1 (42-112)||(49811557-49811627)
chr1 (23-82)||(13414791-13414850)
chr1 (29-115)||(3302550-3302636)
chr1 (31-112)||(23597110-23597191)
chr1 (47-113)||(41608528-41608594)
chr1 (26-114)||(26440732-26440820)
chr1 (23-107)||(44453984-44454068)
chr1 (23-112)||(37926449-37926538)
chr1 (26-114)||(6260868-6260956)
chr1 (23-71)||(44334181-44334229)
chr1 (47-114)||(47748441-47748507)
chr1 (23-69)||(48489343-48489389)
[»] chr6 (20 HSPs)
chr6 (23-115)||(32869675-32869767)
chr6 (23-114)||(17598552-17598643)
chr6 (23-109)||(22880669-22880755)
chr6 (25-112)||(6209478-6209565)
chr6 (23-112)||(11427616-11427707)
chr6 (26-113)||(31109414-31109501)
chr6 (23-112)||(15832577-15832666)
chr6 (23-112)||(31976248-31976337)
chr6 (26-112)||(29857827-29857913)
chr6 (23-118)||(15990053-15990148)
chr6 (23-113)||(15508035-15508125)
chr6 (23-112)||(30341371-30341460)
chr6 (23-109)||(23128138-23128224)
chr6 (47-114)||(31953065-31953132)
chr6 (23-108)||(28536499-28536582)
chr6 (23-112)||(31110772-31110859)
chr6 (44-112)||(12732482-12732550)
chr6 (36-111)||(946377-946452)
chr6 (23-113)||(4231547-4231637)
chr6 (47-112)||(22422053-22422118)
[»] chr2 (34 HSPs)
chr2 (23-118)||(9058474-9058569)
chr2 (22-113)||(40701477-40701568)
chr2 (23-117)||(10249393-10249487)
chr2 (23-109)||(28863458-28863544)
chr2 (23-112)||(32505659-32505748)
chr2 (23-112)||(33436111-33436200)
chr2 (23-114)||(13438341-13438432)
chr2 (23-112)||(7465746-7465835)
chr2 (23-112)||(17473020-17473109)
chr2 (23-115)||(28381666-28381758)
chr2 (23-114)||(19930831-19930922)
chr2 (23-112)||(5574499-5574588)
chr2 (23-112)||(30915463-30915552)
chr2 (26-114)||(27864702-27864790)
chr2 (29-112)||(38882831-38882913)
chr2 (26-113)||(4060684-4060771)
chr2 (23-114)||(40613913-40614004)
chr2 (26-112)||(20700815-20700901)
chr2 (23-112)||(42257193-42257282)
chr2 (25-112)||(38273155-38273242)
chr2 (31-112)||(26891523-26891604)
chr2 (44-112)||(33436211-33436279)
chr2 (23-118)||(17820015-17820110)
chr2 (23-114)||(43490119-43490210)
chr2 (23-112)||(2533124-2533212)
chr2 (23-112)||(38732354-38732443)
chr2 (23-94)||(2997498-2997569)
chr2 (23-106)||(3439985-3440068)
chr2 (29-111)||(41575138-41575220)
chr2 (47-96)||(13365369-13365418)
chr2 (23-112)||(36168836-36168925)
chr2 (23-112)||(45097746-45097835)
chr2 (23-69)||(3737986-3738032)
chr2 (42-90)||(41758607-41758655)
[»] chr5 (28 HSPs)
chr5 (23-109)||(18520895-18520981)
chr5 (23-112)||(13811652-13811741)
chr5 (23-116)||(40145403-40145496)
chr5 (22-113)||(35785198-35785289)
chr5 (23-112)||(2740274-2740363)
chr5 (23-112)||(36732953-36733042)
chr5 (23-115)||(33149649-33149741)
chr5 (23-114)||(14831812-14831903)
chr5 (23-114)||(42414313-42414404)
chr5 (23-114)||(28177773-28177864)
chr5 (23-112)||(35943903-35943992)
chr5 (23-112)||(6679698-6679787)
chr5 (23-112)||(15409621-15409710)
chr5 (53-111)||(36875644-36875702)
chr5 (23-112)||(3921276-3921365)
chr5 (23-113)||(26720515-26720605)
chr5 (23-113)||(26990264-26990354)
chr5 (23-112)||(2252179-2252268)
chr5 (23-112)||(31008988-31009077)
chr5 (23-112)||(41470427-41470516)
chr5 (31-121)||(6260020-6260110)
chr5 (23-64)||(31132392-31132433)
chr5 (44-112)||(33825356-33825424)
chr5 (49-107)||(10356639-10356698)
chr5 (49-112)||(39688934-39688997)
chr5 (23-68)||(21370048-21370093)
chr5 (44-111)||(16327902-16327969)
chr5 (23-112)||(20073527-20073616)
[»] chr4 (35 HSPs)
chr4 (23-113)||(11511473-11511563)
chr4 (23-113)||(54473544-54473634)
chr4 (23-112)||(41236347-41236436)
chr4 (23-112)||(48183060-48183149)
chr4 (23-112)||(50052439-50052528)
chr4 (23-113)||(6034043-6034133)
chr4 (23-112)||(480458-480547)
chr4 (23-112)||(29239886-29239975)
chr4 (23-121)||(42044378-42044476)
chr4 (23-114)||(3481652-3481743)
chr4 (23-112)||(29234256-29234345)
chr4 (23-113)||(50526182-50526272)
chr4 (35-112)||(23608235-23608312)
chr4 (23-112)||(24995118-24995207)
chr4 (23-113)||(31910191-31910281)
chr4 (45-114)||(40574777-40574846)
chr4 (23-118)||(29977879-29977974)
chr4 (23-112)||(19670727-19670816)
chr4 (47-112)||(55475191-55475256)
chr4 (23-107)||(53352577-53352660)
chr4 (23-68)||(41823926-41823971)
chr4 (23-112)||(47986208-47986297)
chr4 (23-112)||(50813903-50813992)
chr4 (47-112)||(55079749-55079814)
chr4 (23-94)||(17983754-17983825)
chr4 (23-104)||(28480279-28480360)
chr4 (23-104)||(28481154-28481235)
chr4 (23-104)||(28482029-28482110)
chr4 (47-112)||(29547994-29548059)
chr4 (47-112)||(32766958-32767023)
chr4 (26-112)||(8343177-8343263)
chr4 (23-112)||(48647737-48647826)
chr4 (47-115)||(18924530-18924598)
chr4 (47-112)||(44536781-44536845)
chr4 (44-112)||(47104544-47104612)
[»] scaffold0237 (1 HSPs)
scaffold0237 (26-112)||(4029-4115)
[»] scaffold1268 (1 HSPs)
scaffold1268 (23-114)||(940-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (23-114)||(940-1031)
[»] scaffold0321 (1 HSPs)
scaffold0321 (31-112)||(10128-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (23-118)||(8874-8969)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-96)||(152514-152587)
[»] scaffold0316 (1 HSPs)
scaffold0316 (23-69)||(17097-17143)


Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 735300 - 735151
Alignment:
Q  113 atatttaaaagtgaaaacgataaagtcatgaaactctttaaaatgatcataaattaaatgtgtatggttggttatatagtcctagctacatccactctta 212  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  735300 atatttaaaagtgaaaacaataaagtcatgaaactctttaaaatgatcataaattaaatgtgtatggttggttatatagtcctagctacatccactctta 735201  T
Q  213 cacacaaataacactctcattagatgcatgagtaggtgagcaaatgaagt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  735200 cacacaaataacactctcattagatgcatgagtaggtgagcaaatgaagt 735151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 7389478 - 7389389
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  7389478 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 19329931 - 19329840
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  19329931 ttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 19329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 35137622 - 35137531
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  35137622 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 38267129 - 38267039
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||    
T  38267129 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 4999525 - 4999614
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  4999525 ttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 8080394 - 8080483
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8080394 ttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 36361924 - 36362013
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||    
T  36361924 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 3784084 - 3783998
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  3784084 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 3434651 - 3434562
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  3434651 ttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 36362115 - 36362026
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||    
T  36362115 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 38837306 - 38837217
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  || ||| |||||||||||||||||||||||||||||||||||    
T  38837306 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 19436201 - 19436287
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  19436201 tgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 40957796 - 40957707
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||  || |||||||||||||| ||||||||||||||||||||    
T  40957796 ttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 8238302 - 8238210
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccaccta-agggtgtctatgtatcattactcat 114  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||| ||||||    
T  8238302 ttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcat 8238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 3694456 - 3694365
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||| ||| |||||||| ||||    
T  3694456 ttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcattattcat 3694365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 46374813 - 46374902
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||| ||| ||| | ||||||||||||| |||||||||||||| ||||    
T  46374813 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 32951504 - 32951592
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| ||| | | ||||| || ||||| |||||||||||||||||||    
T  32951504 ttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 21234490 - 21234399
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||| || ||| |||||||||| ||||||||||| |||||||| ||| ||||| ||||||||| |||||||||||||| ||||||    
T  21234490 ttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 38044286 - 38044197
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || |||| |||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  38044286 ttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 35522965 - 35522881
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    ||||||||| ||||  || | ||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  35522965 ttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  46 gtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||   || |||| ||||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 39255935 - 39256024
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||| || ||||||||| | ||||||||||||||||| ||||| |||| |||| ||||||||||||||| |||||||||||||| |||||    
T  39255935 ttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 22343426 - 22343361
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 36208262 - 36208173
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||||||    | |||| ||||||||||||||||||||||||| ||||    
T  36208262 ttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 41915830 - 41915741
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||| ||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  41915830 ttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 11044267 - 11044188
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||||          |||||||||| | | |||||||||||||||||||||||||||||||||||    
T  11044267 ttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 18207268 - 18207180
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||||| |||||| | |||||| |||||||||| ||||||||||  ||| ||||||||||||||| |||||||||||||| ||||    
T  18207268 ttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 26296733 - 26296644
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | |||| |||||||||| ||||| ||| ||| ||||||||| ||||||||| |||||||||||||| ||||    
T  26296733 ttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 35468894 - 35468955
Alignment:
Q  51 agatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| ||||||||||||||| | |||||||| |||||| |||||||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 40846124 - 40846213
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  | ||||| ||| |||||||||||||| ||||||  ||| ||||||||||||||| ||| |||||||||| ||||    
T  40846124 ttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 46033812 - 46033901
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| || || ||||| ||||||||||||||| ||||||||| ||| ||| ||||||||||||||  | |||||||||||| ||||    
T  46033812 ttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 32564461 - 32564527
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||  ||| |||||||||| |||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 7727995 - 7727906
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  |||| || |||||||||||| ||||  ||||||  ||| |||| |||||||||||||| |||||||||| ||||    
T  7727995 ttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 31735940 - 31735882
Alignment:
Q  56 tttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||| |||  || ||||||||||||||| |||||||||||||| ||||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 2318261 - 2318338
Alignment:
Q  30 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    ||||||||||||| ||  ||||||||||||||||||||||||  ||| | |||||||||| || |||  |||||||||    
T  2318261 gggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 12310983 - 12310906
Alignment:
Q  33 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||| || |||||||||||||| ||| | || |  | |||||| ||||||||||||||||||||||||| ||||    
T  12310983 tccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcataactc 12310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 32045906 - 32045838
Alignment:
Q  43 tacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    |||||||||||||||| |||||||||| | |  ||||||||||||||||  | | ||||||||||||||    
T  32045906 tacgtgtcagatttttatgtgggtgtccagtaatatattgccacctaagaatatatatgtatcattact 32045838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 16374845 - 16374883
Alignment:
Q  33 tccacgtgactacgtgtcagatttttgtgtgggtgtcaa 71  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  16374845 tccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 41423771 - 41423681
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||| |||| || ||||||| || ||||||||||||||||  |||||||  ||| |||| ||| |||| | |||||||||||||| |||||    
T  41423771 ttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 53982100 - 53982007
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  53982100 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcatat 53982007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 33644289 - 33644199
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  33644289 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 54868905 - 54868995
Alignment:
Q  22 attgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  54868905 attgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 49607503 - 49607414
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  49607503 ttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 52629389 - 52629305
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  52629389 ttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 8076482 - 8076393
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||||    
T  8076482 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 17470494 - 17470405
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||    
T  17470494 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 27714902 - 27714991
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||    
T  27714902 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 11095377 - 11095453
Alignment:
Q  36 acgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 31456778 - 31456690
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  31456778 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 48587102 - 48587187
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatt 108  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  48587102 ttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 26141543 - 26141635
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  26141543 ttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcata 26141635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 33118872 - 33118951
Alignment:
Q  33 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 36707439 - 36707524
Alignment:
Q  27 gcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 35536707 - 35536626
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||| |||| |||||||| |||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  35536707 ggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 26754784 - 26754700
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    |||||||||||||| ||||| || |||||||||||||||||| |||| || ||| |||||||||||||||||||||||| |||||    
T  26754784 ttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 24699972 - 24700054
Alignment:
Q  30 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||| | ||||| ||||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 41189775 - 41189864
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||| | |||||||| |||||| ||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||    
T  41189775 ttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 30801744 - 30801834
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||| ||||||||  ||||||| ||||| |||||||||||||| ||||| ||| ||||  ||||||||||||||||||||||||| ||||    
T  30801744 ttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattgctca 30801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 14623874 - 14623939
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||| |||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 11347940 - 11348022
Alignment:
Q  30 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||| | | ||||| ||||||||| |||||||||||||| ||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 20764926 - 20765016
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||||| |||  || |||| |||||||||| ||||||||| |||| |||||    
T  20764926 ttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 8956843 - 8956762
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||| |||  |||||||| |||||| ||||||||||||| | | ||||||||| ||||| |||||||||||||||||||    
T  8956843 ggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 9563088 - 9562999
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| || |||||||||||||||||||||||||| | ||| ||||||| | | ||||| || |||| ||||| |||||||||||||||    
T  9563088 ttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 51419371 - 51419460
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| | ||| | ||||||||||||||||||||||||| ||| | | ||||| || |||||| |||||||||||||| ||||    
T  51419371 ttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 13898074 - 13898154
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||| |||  ||||||||||||||| ||||||||||||  ||| ||||||||||||||| ||| ||| ||||||||||    
T  13898074 ggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 45058588 - 45058653
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||||| |||||||||| |||||    
T  45058588 tgtcagatttttatgtgggtgtcaag-ggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 11907460 - 11907371
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  |||| || ||||||||||||||||| ||||  |   || ||||| |||||||||||||||||||||||| ||||    
T  11907460 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 47531954 - 47531865
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||| ||  || | |||||||||||| |||||||| ||| ||| ||| |||||||| |||||| |||||||||||||| ||||    
T  47531954 ttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 25407179 - 25407245
Alignment:
Q  44 acgtgtcagattttt-gtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||| || ||| ||||||||||||    
T  25407179 acgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 41080790 - 41080709
Alignment:
Q  30 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| |||| || | ||||||||||| |||||||||||| ||| | |||| | |||||| |||||||||||||||||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||| ||||||||||||| | | ||||  ||| ||||| ||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 36331340 - 36331407
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaa 90  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  |||  ||||||||||||    
T  36331340 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 35093650 - 35093592
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatc 105  Q
    ||||||||||||| |||| ||||||||| | ||||| ||||||| | ||||||||||||    
T  35093650 tgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 36331416 - 36331478
Alignment:
Q  50 cagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||| ||||||  |||  ||||||| |||||||||| |||||||||| ||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 42823197 - 42823116
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    |||||||||||  |||| || ||||| |||||| ||||||||||||  ||| |||| |||| ||| ||||| ||||||||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 48375717 - 48375806
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||| ||  ||||||||||||| ||| | |  |  ||| ||||| |||||||||||||||||| ||||| ||||    
T  48375717 ttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 504132 - 504223
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  504132 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 14548011 - 14547922
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14548011 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 15197422 - 15197331
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  15197422 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 12831136 - 12831047
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  12831136 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 23122611 - 23122700
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  23122611 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcata 23122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34012307 - 34012399
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  34012307 ttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcata 34012399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 40423954 - 40424044
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  40423954 ttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 5957920 - 5957831
Alignment:
Q  22 attgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  5957920 attgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 37038568 - 37038479
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||    
T  37038568 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 1179951 - 1180040
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  1179951 ttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 44507098 - 44507187
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||  || |||| ||||||||||||||||||||||||||||||    
T  44507098 ttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 10284642 - 10284731
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  || ||||| ||| |||||||||||||||||||| ||||    
T  10284642 ttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 15048193 - 15048282
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||| |||||    
T  15048193 ttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 8841443 - 8841513
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaaggg 93  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  8841443 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 10621098 - 10621182
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    ||||||||| || | ||| ||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||    
T  10621098 ttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 43414592 - 43414683
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||||||||| ||| | |||||| |||||| |||||||||||||| ||||||    
T  43414592 ttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 16383466 - 16383377
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  16383466 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 20074966 - 20075037
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    |||||||| |||||| |||||||||||||  || ||||||||||||||| ||||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcata 20075037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 9122274 - 9122196
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  9122274 ttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtg----------tattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 34307305 - 34307216
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||| ||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  34307305 ttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  29 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||   || ||||| |||||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 4854874 - 4854963
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||| ||| | || | |||||||||| ||| ||||| ||| ||| ||||||||||||||| |||||||||||||||||||    
T  4854874 ttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 17443914 - 17443825
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||| ||   || ||||| ||||||||| |||||||||||||| ||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 24307804 - 24307893
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || | |||||||||||||||||||||||  | | ||||||||||||||||||| |||||||||| ||||    
T  24307804 ttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 24307692 - 24307629
Alignment:
Q  49 tcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||| |||||||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 42221598 - 42221515
Alignment:
Q  29 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |    | ||||| ||||||||| ||| |||||||||||||||    
T  42221598 ggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 15258940 - 15259029
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||||||||| || |||||||||||| ||||| |||| |  | | |||||||| ||||| || |||||||||||| ||||    
T  15258940 ttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 16056412 - 16056501
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  | | ||||| ||| ||||| ||| |||||||||| ||||    
T  16056412 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 32032789 - 32032725
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||| ||||||  | | ||||||||||||||||||| |||||||||| ||||    
T  32032789 tgtcagatttttgtgtggatgtcaag-gatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 38229507 - 38229470
Alignment:
Q  33 tccacgtgactacgtgtcagatttttgtgtgggtgtca 70  Q
    |||||||||| || ||||||||||||||||||||||||    
T  38229507 tccacgtgaccacatgtcagatttttgtgtgggtgtca 38229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 9474887 - 9474977
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  9474887 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 48716293 - 48716383
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48716293 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 2582004 - 2581915
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2582004 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 27564746 - 27564838
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  27564746 ttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcata 27564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 3000408 - 3000319
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  3000408 ttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 8346399 - 8346488
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  8346399 ttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 38632332 - 38632421
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  38632332 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 44548387 - 44548482
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||| ||| ||||    
T  44548387 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcattaatcaaattt 44548482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 47452331 - 47452422
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  47452331 ttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 38595243 - 38595154
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||    
T  38595243 ttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 51898694 - 51898783
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||    
T  51898694 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 50630547 - 50630458
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| | | ||||||||||||||||| |||||||||||||||||    
T  50630547 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 32813336 - 32813247
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||| ||||    
T  32813336 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 41758894 - 41758805
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||  ||| |||||||||||||||||||||    
T  41758894 ttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 43221 - 43132
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||||| | ||||||  |||||||||||||||||||    
T  43221 ttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 26274521 - 26274426
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    |||||| || |||||||||||| ||||||||||||| ||||| ||||||||| | ||||||||| |||||||||||||||||||||| || |||||    
T  26274521 ttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattcttattt 26274426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 37649275 - 37649196
Alignment:
Q  35 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||| |||||||||||||||||||||||||||||  || ||||||||||||| | |||||||||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 11152389 - 11152476
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    |||||||||||| || |||||||||||||||||||||||||| |||| || ||| ||||||||||||| ||||||||||| ||||||||    
T  11152389 ttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 50591011 - 50591101
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| |||||    
T  50591011 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 5959011 - 5959100
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  |||| || |||||||||||||||||||||||||  ||| ||||||||| ||||||||| |||||||||| ||||    
T  5959011 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 45044571 - 45044640
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagg 92  Q
    |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||    
T  45044571 ttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 49811557 - 49811627
Alignment:
Q  42 ctacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| |||||| ||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 13414850 - 13414791
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattg 82  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  13414850 ttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 3302550 - 3302636
Alignment:
Q  29 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||||||  ||| ||||||||||||||||||||||||||| |    ||||||| ||||||||| ||| ||||||||||||||||||    
T  3302550 ggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcata 3302636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 23597110 - 23597191
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||| | ||||||||||||||| ||||||| |||||  || ||||||||||||| | |||||||||||||||||||    
T  23597110 ggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 41608528 - 41608594
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||||| |||||||  ||| ||||||||||||||| ||| |||||||||| |||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 26440820 - 26440732
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||| |||| ||| | ||||||||||||||||||||||||| ||| ||| ||||| || |||||| ||||||| |||| | ||||||    
T  26440820 tgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 44454068 - 44453984
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    ||||| ||| ||||||| || || |||||||||||||||||||| ||||  | | ||||||||| ||| ||||||||||||||||    
T  44454068 ttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 37926449 - 37926538
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| |||| |||| ||| | ||||||||||||||| ||||||||| ||| | | ||||||||||||| | | |||||||||||| ||||    
T  37926449 ttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 6260956 - 6260868
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||||| || ||| |||||||| |||||||||  |  ||| |||| |||||||||| | ||||| |||||| ||||||    
T  6260956 tgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactcat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 44334181 - 44334229
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 71  Q
    |||||| ||||||| ||||||||||||||| ||||||||||| ||||||    
T  44334181 ttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaa 44334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 47748507 - 47748441
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||| | ||||||||||  ||| ||||||||||||||||| | |||||||||| ||||||    
T  47748507 tgtcagatttttatatgggtgtcaag-ggtgtattgccacctaagggtatttatgtatcataactcat 47748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 48489389 - 48489343
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 69  Q
    ||||||||| |||||||||| || |||||||||||||||||| ||||    
T  48489389 ttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 32869767 - 32869675
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  32869767 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcata 32869675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 17598643 - 17598552
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  17598643 ttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 22880669 - 22880755
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  22880669 ttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 6209478 - 6209565
Alignment:
Q  25 gtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  6209478 gtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 11427707 - 11427616
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccaccta--agggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||  |||||||||||||||||||||||    
T  11427707 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 31109414 - 31109501
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||  |||||||||||    
T  31109414 tgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 15832666 - 15832577
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 31976337 - 31976248
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||    
T  31976337 ttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 29857913 - 29857827
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||| |||||||||||||||||||||    
T  29857913 tgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 15990053 - 15990148
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| |||| |||||    
T  15990053 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttattt 15990148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 15508035 - 15508125
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| |||||    
T  15508035 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 30341371 - 30341460
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  30341371 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 23128138 - 23128224
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| | | ||||  ||| ||| ||||||||| ||||||||    
T  23128138 ttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 31953065 - 31953132
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||| ||||||| |||||||||||||    
T  31953065 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcat 31953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 28536499 - 28536582
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatt 108  Q
    ||||| ||||||||| ||||  |||||||||||||||||||||||||||  | | ||||||||||||||| ||| |||||||||||    
T  28536499 ttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 31110772 - 31110859
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||| |||  ||||||||||||||||||| |  ||||||| ||| ||||||||||||||| |||||||||||||| ||||    
T  31110772 ttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 12732550 - 12732482
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||    ||||||||||| ||||  |||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  36 acgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||| |||||||||||||| || ||||||||| ||| ||||  ||||||||| |||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 4231637 - 4231547
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||  || | |||||||||||||||||||||||| |||  ||| ||||||||||||| | ||| |||| ||||| |||||    
T  4231637 ttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 22422053 - 22422118
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||| |||||| || |||||||  | | ||||||||||||||| |||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactc 22422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 9058569 - 9058474
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  9058569 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttattt 9058474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 40701568 - 40701477
Alignment:
Q  22 attgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  40701568 attgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 10249393 - 10249487
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  10249393 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactcttatt 10249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 28863544 - 28863458
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  28863544 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 32505659 - 32505748
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  32505659 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 33436111 - 33436200
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  33436111 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 13438432 - 13438341
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
T  13438432 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 7465746 - 7465835
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  7465746 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 17473109 - 17473020
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  17473109 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 28381666 - 28381758
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  28381666 ttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcata 28381758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 19930831 - 19930922
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  19930831 ttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcattattcat 19930922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 5574499 - 5574588
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  5574499 ttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 30915552 - 30915463
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  30915552 ttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 27864790 - 27864702
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  27864790 tgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 38882831 - 38882913
Alignment:
Q  29 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 4060771 - 4060684
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  4060771 tgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 40613913 - 40614004
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||    
T  40613913 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 40614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 20700901 - 20700815
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||||| ||||| |||||||||||||||||||    
T  20700901 tgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 42257282 - 42257193
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||| | ||||||||||||||| ||||||||||||||| | ||||||||||||| | |||||||||||||| ||||    
T  42257282 ttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 38273155 - 38273242
Alignment:
Q  25 gtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| ||| ||| |||||||| |||||  |||||||||||||| ||||    
T  38273155 gtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 26891523 - 26891604
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| || ||||||||||||||||||||||| |  ||| |||||||||||||||||| ||||||||||| ||||    
T  26891523 ggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 33436279 - 33436211
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 17820015 - 17820110
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    ||||| ||||||||||| || || |||||||||||||||||||||||||  ||| ||||||||||||  | |||||||||||||| ||||| ||||    
T  17820015 ttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactcaaattt 17820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 43490210 - 43490119
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||| ||||||||||||| |||||||||| ||||||    
T  43490210 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 2533212 - 2533124
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||| | ||| ||||||||||||||||||||| ||||||||| | | ||||||||| ||||| |||||||||||||| ||||    
T  2533212 ttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 38732443 - 38732354
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  |||| || |||||||||||||||||||||||||  | | ||||| ||| ||||||||| |||||||||| ||||    
T  38732443 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 2997498 - 2997569
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggt 94  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| |||||||||||||||||    
T  2997498 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 3440068 - 3439985
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatca 106  Q
    ||||||||||||||||| |  || ||| ||||||||||||||||||| |   || |||||||||||||||||||||| ||||||    
T  3440068 ttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 41575220 - 41575138
Alignment:
Q  29 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||| |||| || ||||| |||||||||||  ||||||| ||| |||| ||| |||||| ||||||||||||||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 13365418 - 13365369
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgt 96  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  13365418 tgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgt 13365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 36168925 - 36168836
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||| | |||||||| ||||||||||||| || ||| | | ||||| || |||||| |||||||||||||| ||||    
T  36168925 ttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 45097746 - 45097835
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||| ||||||||||  | | ||||||||||||||| ||| |||||||||| ||||    
T  45097746 ttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 3738032 - 3737986
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 69  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||    
T  3738032 ttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 41758655 - 41758607
Alignment:
Q  42 ctacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaa 90  Q
    ||||||||||||||||| | | ||||||||| |||||||| ||||||||    
T  41758655 ctacgtgtcagatttttatataggtgtcaaaaggtatattaccacctaa 41758607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 18520895 - 18520981
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcatta 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18520895 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 13811741 - 13811652
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  13811741 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 40145496 - 40145403
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatat 116  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  40145496 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactcatat 40145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 35785289 - 35785198
Alignment:
Q  22 attgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  35785289 attgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 2740363 - 2740274
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  2740363 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 36732953 - 36733042
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  36732953 ttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 33149649 - 33149741
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  33149649 ttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcata 33149741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 14831903 - 14831812
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  14831903 ttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 42414313 - 42414404
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||    
T  42414313 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 28177864 - 28177773
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||    
T  28177864 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 35943903 - 35943992
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  35943903 ttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 6679787 - 6679698
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||||    
T  6679787 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 15409621 - 15409710
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||   | ||||| ||||||||| |||||||||||||| ||||    
T  15409621 ttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  53 atttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 3921276 - 3921365
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  3921276 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 26720605 - 26720515
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||| |||| ||| | ||||||||||||||| ||| ||||| ||| ||| ||||||||||||||| |||||||||||||| |||||    
T  26720605 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 26990354 - 26990264
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||| |||| ||| | ||||||||||||||| ||| ||||| ||| ||| ||||||||||||||| |||||||||||||| |||||    
T  26990354 ttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 2252179 - 2252268
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| ||||||||||||||| ||| |||||||||| ||||    
T  2252179 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 31009077 - 31008988
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  ||   | ||||| ||||||||| ||| |||||||||| ||||    
T  31009077 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 41470427 - 41470516
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||| | ||  | | ||| | | ||||||||||||| ||||||||||||| |||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 6260020 - 6260110
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatatttaaa 121  Q
    |||||| ||||| | |||| ||||||||| |||||||| ||| ||| ||||| |||||| || ||| |||||||||||||||| |||||||    
T  6260020 ggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactcaaatttaaa 6260110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 31132433 - 31132392
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  31132433 ttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 33825356 - 33825424
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||| ||||||||||||   || ||||||||||||||  |||||||| ||||||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  49 tcagatttttgtgtgggtgtcaaatgg-tatattgccacctaagggtgtctatgtatcat 107  Q
    |||||||||||||||||||||||  || | ||||||||||||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 39688934 - 39688997
Alignment:
Q  49 tcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||  | | ||||||||| ||||||||| |||||||||| ||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 21370093 - 21370048
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgt 68  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  21370093 ttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 16327969 - 16327902
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattact 111  Q
    ||||||||||||||| ||||||||||||  | | ||||||||||||||| | | ||| ||||||||||    
T  16327969 acgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 20073527 - 20073616
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| |||||||||||   |||||  |||||||| |||| |||||||| ||| ||||| || |||| | ||||||| |||||||||||    
T  20073527 ttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 11511473 - 11511563
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  11511473 ttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 54473544 - 54473634
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  54473544 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 41236436 - 41236347
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  41236436 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 48183060 - 48183149
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  48183060 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 50052439 - 50052528
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  50052439 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 6034133 - 6034043
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6034133 ttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 480458 - 480547
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  480458 ttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 29239975 - 29239886
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29239975 ttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 42044378 - 42044476
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatatttaaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || | | ||||||||||||||||||||||||||||||||||| | ||||||    
T  42044378 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactcttttttaaa 42044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 3481743 - 3481652
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||||||    
T  3481743 ttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 29234256 - 29234345
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  29234256 ttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 50526182 - 50526272
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||    
T  50526182 ttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 23608312 - 23608235
Alignment:
Q  35 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||    
T  23608312 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 24995118 - 24995207
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||||||||| || |||||||||||    
T  24995118 ttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 31910281 - 31910191
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactca 113  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||||  || ||||| ||||||||| |||||||||||||| |||||    
T  31910281 ttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 40574846 - 40574777
Alignment:
Q  45 cgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||| ||||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 29977974 - 29977879
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||| ||  ||| |||||||||||| || | | ||||||||||||||| |||||    
T  29977974 ttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactcttattt 29977879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 19670727 - 19670816
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || ||||||||||||||||| |||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  19670727 ttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 55475256 - 55475191
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||| ||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 53352577 - 53352660
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcat 107  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||| |||   | ||||| ||||||||||||||||||||||||    
T  53352577 ttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 41823971 - 41823926
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgt 68  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  41823971 ttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 47986297 - 47986208
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||||||  || | || |||||||||||||||||| ||||||  | | ||||||||||||||||||| |||||||||| ||||    
T  47986297 ttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 50813903 - 50813992
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    ||||||||||| ||  |||| || |||||||||||||||||||||||||  ||| |||| ||||||||| |||| |||||||||| ||||    
T  50813903 ttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||||||||  ||| ||||||||||||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 17983754 - 17983825
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggt 94  Q
    ||||||||||||||  || | || |||||||||||||||||||||||||  ||| |||||||||||||||||    
T  17983754 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

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Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 28480279 - 28480360
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtat 104  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||| ||   || ||||| ||||||||| |||||||||||    
T  28480279 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

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Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 28481154 - 28481235
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtat 104  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||| ||   || ||||| ||||||||| |||||||||||    
T  28481154 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

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Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 28482029 - 28482110
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtat 104  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||| ||   || ||||| ||||||||| |||||||||||    
T  28482029 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

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Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||  | | ||||||||||||||| ||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

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Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 32767023 - 32766958
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||| ||||||||||  ||| |||||||||||||| |||| |||||||||| ||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

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Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 8343177 - 8343263
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||  || | || |||||||||||| ||| ||||||||| | | ||||||||||||||| ||| |||||||||| ||||    
T  8343177 tgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

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Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 48647737 - 48647826
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||||| ||  ||| |||||  |||||||| ||| ||||| |||| ||||    
T  48647737 ttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 18924530 - 18924598
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcata 115  Q
    |||||||||||||||||| | ||||  ||| ||||||||||||||||| | |||| ||||| |||||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactcata 18924598  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 44536781 - 44536845
Alignment:
Q  47 tgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||| |||| || ||| |||||||||||||  |||| |||||||||| ||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  44 acgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||| |||||||||||||||||| |  || ||||| || |||||  ||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

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Target: scaffold0237 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 4115 - 4029
Alignment:
Q  26 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||| |||||||||||||||||||||    
T  4115 tgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold1268 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 940 - 1031
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| | |||||||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||| | |||||||||||||||||||||    
T  940 ttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold1267 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 940 - 1031
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcat 114  Q
    ||||||||| | |||||||||||||||||| ||||||||||| ||| ||| ||| ||||||||||||| | |||||||||||||||||||||    
T  940 ttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold0321 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 10128 - 10209
Alignment:
Q  31 ggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactc 112  Q
    |||||||||||||||||||||||||||| ||||| ||||||| | | ||||||||||||| |||||||||||||||| ||||    
T  10128 ggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

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Target: scaffold0110 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 8874 - 8969
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgtctatgtatcattactcatattt 118  Q
    ||||| |||||||||||||||| |||||| |||||||||| | |||||||| || ||||| ||| ||||| ||||||| |||||| ||||| ||||    
T  8874 ttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactcaaattt 8969  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 152587 - 152514
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtatattgccacctaagggtgt 96  Q
    ||||||||| ||||  |||| || |||||||||||||||||||||||||  ||| |||||||||| ||||||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 17143 - 17097
Alignment:
Q  23 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 69  Q
    |||||||||||||| ||||| || |||||||||||||||||| ||||    
T  17143 ttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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