View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5086_low_28 (Length: 261)

Name: NF5086_low_28
Description: NF5086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5086_low_28
NF5086_low_28
[»] chr2 (68 HSPs)
chr2 (73-245)||(24859992-24860164)
chr2 (73-238)||(8455320-8455487)
chr2 (73-238)||(25249742-25249908)
chr2 (79-238)||(12023929-12024089)
chr2 (73-238)||(9671144-9671310)
chr2 (73-238)||(11514400-11514566)
chr2 (81-211)||(14444720-14444851)
chr2 (73-238)||(10543662-10543831)
chr2 (73-238)||(14530282-14530451)
chr2 (73-238)||(21779265-21779430)
chr2 (73-228)||(17667976-17668133)
chr2 (73-211)||(10546153-10546294)
chr2 (73-183)||(36871512-36871622)
chr2 (73-228)||(17623538-17623695)
chr2 (73-238)||(25079721-25079889)
chr2 (100-238)||(22371021-22371158)
chr2 (73-238)||(23397730-23397895)
chr2 (73-228)||(24200627-24200786)
chr2 (73-238)||(27573585-27573751)
chr2 (73-236)||(39914310-39914475)
chr2 (75-234)||(26684626-26684789)
chr2 (83-238)||(17896223-17896381)
chr2 (75-217)||(25641487-25641630)
chr2 (75-181)||(30826058-30826164)
chr2 (73-182)||(40762238-40762349)
chr2 (85-225)||(99281-99421)
chr2 (80-224)||(5841006-5841154)
chr2 (81-238)||(14544027-14544189)
chr2 (80-226)||(21377085-21377232)
chr2 (79-226)||(4516361-4516510)
chr2 (81-237)||(7214499-7214659)
chr2 (79-219)||(17380248-17380388)
chr2 (82-151)||(24890464-24890533)
chr2 (76-238)||(19977721-19977885)
chr2 (79-151)||(44643576-44643648)
chr2 (73-151)||(25632562-25632640)
chr2 (89-162)||(32781308-32781382)
chr2 (73-227)||(40416875-40417031)
chr2 (74-132)||(23488555-23488613)
chr2 (73-130)||(40579753-40579810)
chr2 (151-224)||(44604832-44604905)
chr2 (114-224)||(5450263-5450376)
chr2 (85-151)||(13245111-13245177)
chr2 (86-132)||(19185760-19185806)
chr2 (83-129)||(34766330-34766376)
chr2 (75-149)||(39499236-39499310)
chr2 (75-132)||(31158445-31158502)
chr2 (82-139)||(31523296-31523353)
chr2 (73-130)||(41409936-41409993)
chr2 (73-117)||(124918-124962)
chr2 (132-238)||(17705459-17705567)
chr2 (73-117)||(22371199-22371243)
chr2 (73-129)||(34080176-34080232)
chr2 (81-211)||(19614983-19615116)
chr2 (85-140)||(24059012-24059067)
chr2 (81-151)||(44449395-44449466)
chr2 (76-181)||(30864424-30864530)
chr2 (73-139)||(31525771-31525837)
chr2 (81-122)||(8575977-8576018)
chr2 (111-226)||(23145740-23145857)
chr2 (111-226)||(23557530-23557647)
chr2 (89-226)||(33795261-33795400)
chr2 (73-131)||(1289095-1289154)
chr2 (78-148)||(17471605-17471676)
chr2 (81-144)||(31821355-31821418)
chr2 (80-122)||(3633719-3633761)
chr2 (82-135)||(4794871-4794924)
chr2 (85-225)||(45235833-45235976)
[»] chr8 (53 HSPs)
chr8 (73-238)||(35261643-35261810)
chr8 (73-235)||(13160669-13160832)
chr8 (73-238)||(28817630-28817797)
chr8 (81-238)||(36720760-36720919)
chr8 (79-238)||(12670260-12670419)
chr8 (73-238)||(30454101-30454266)
chr8 (73-228)||(45071239-45071395)
chr8 (79-238)||(44530113-44530274)
chr8 (74-238)||(29521690-29521856)
chr8 (73-238)||(39460998-39461167)
chr8 (73-240)||(17823538-17823707)
chr8 (79-238)||(7136537-7136700)
chr8 (73-240)||(18164764-18164932)
chr8 (73-238)||(6760786-6760955)
chr8 (73-238)||(25250486-25250655)
chr8 (73-238)||(2626483-2626653)
chr8 (73-233)||(12625858-12626021)
chr8 (79-226)||(20284079-20284232)
chr8 (81-183)||(29877113-29877217)
chr8 (73-238)||(28407380-28407534)
chr8 (79-226)||(21070707-21070861)
chr8 (81-228)||(8897776-8897925)
chr8 (80-225)||(24365071-24365218)
chr8 (92-238)||(20869523-20869667)
chr8 (74-171)||(5689662-5689761)
chr8 (73-183)||(20869942-20870056)
chr8 (73-181)||(19729363-19729471)
chr8 (73-227)||(26954107-26954266)
chr8 (79-192)||(5135300-5135414)
chr8 (73-219)||(31457156-31457303)
chr8 (79-192)||(8483948-8484063)
chr8 (73-162)||(10857870-10857960)
chr8 (73-143)||(26102578-26102648)
chr8 (82-226)||(44781517-44781665)
chr8 (76-162)||(389686-389773)
chr8 (79-162)||(16225060-16225146)
chr8 (83-226)||(42083712-42083858)
chr8 (79-182)||(44742528-44742634)
chr8 (73-216)||(23000232-23000365)
chr8 (81-226)||(22598133-22598279)
chr8 (88-238)||(24245415-24245565)
chr8 (79-129)||(27507985-27508035)
chr8 (79-151)||(26457782-26457852)
chr8 (73-118)||(27468096-27468141)
chr8 (79-147)||(16013511-16013581)
chr8 (73-132)||(35107315-35107374)
chr8 (73-237)||(40604910-40605075)
chr8 (82-183)||(17250888-17250993)
chr8 (90-181)||(14017989-14018083)
chr8 (90-151)||(11000970-11001031)
chr8 (73-122)||(18595920-18595969)
chr8 (73-130)||(36486570-36486627)
chr8 (113-162)||(43942365-43942417)
[»] chr5 (59 HSPs)
chr5 (73-238)||(41014283-41014449)
chr5 (73-238)||(24448854-24449021)
chr5 (73-238)||(38879545-38879714)
chr5 (73-227)||(27328727-27328885)
chr5 (73-238)||(4619108-4619277)
chr5 (73-238)||(8169988-8170153)
chr5 (73-238)||(43334166-43334335)
chr5 (73-211)||(32703415-32703553)
chr5 (82-227)||(19142956-19143102)
chr5 (73-238)||(35710277-35710442)
chr5 (79-183)||(43574625-43574731)
chr5 (89-228)||(22600428-22600569)
chr5 (81-178)||(7097772-7097870)
chr5 (73-183)||(7368417-7368527)
chr5 (73-144)||(16957374-16957445)
chr5 (79-238)||(208937-209097)
chr5 (79-162)||(16880657-16880741)
chr5 (73-151)||(34154818-34154896)
chr5 (92-179)||(2838802-2838890)
chr5 (73-192)||(13801771-13801894)
chr5 (76-218)||(1850624-1850767)
chr5 (79-209)||(3771334-3771464)
chr5 (73-131)||(25622533-25622591)
chr5 (73-238)||(1565395-1565562)
chr5 (73-183)||(20135623-20135737)
chr5 (79-182)||(29334415-29334521)
chr5 (73-237)||(30006290-30006456)
chr5 (73-238)||(22861673-22861837)
chr5 (83-181)||(5873336-5873435)
chr5 (73-147)||(1405244-1405318)
chr5 (79-147)||(12575670-12575739)
chr5 (79-148)||(13774921-13774990)
chr5 (139-238)||(37024626-37024725)
chr5 (88-142)||(10306493-10306548)
chr5 (81-151)||(12477132-12477203)
chr5 (80-143)||(12006339-12006404)
chr5 (75-162)||(42924836-42924928)
chr5 (130-237)||(22187250-22187359)
chr5 (80-132)||(21784343-21784395)
chr5 (85-226)||(28516449-28516593)
chr5 (73-129)||(39801591-39801647)
chr5 (73-128)||(16028628-16028683)
chr5 (73-120)||(32354211-32354258)
chr5 (79-226)||(39301099-39301248)
chr5 (117-217)||(22907913-22908014)
chr5 (173-237)||(17419879-17419943)
chr5 (158-226)||(23974756-23974824)
chr5 (91-134)||(21542489-21542532)
chr5 (89-182)||(24323725-24323820)
chr5 (89-182)||(24360349-24360444)
chr5 (73-128)||(30877568-30877623)
chr5 (82-144)||(39079764-39079827)
chr5 (76-161)||(9794385-9794471)
chr5 (113-162)||(41425989-41426039)
chr5 (79-151)||(11657709-11657782)
chr5 (73-106)||(29184065-29184098)
chr5 (79-139)||(10943855-10943914)
chr5 (81-149)||(31694120-31694188)
chr5 (73-144)||(37225965-37226037)
[»] chr4 (80 HSPs)
chr4 (73-238)||(5648223-5648389)
chr4 (73-238)||(6430630-6430796)
chr4 (73-238)||(30639344-30639510)
chr4 (73-228)||(40915803-40915959)
chr4 (73-238)||(16408605-16408774)
chr4 (73-237)||(11054152-11054316)
chr4 (73-238)||(20224948-20225113)
chr4 (73-238)||(47528534-47528699)
chr4 (73-238)||(48598829-48598994)
chr4 (73-238)||(21646928-21647097)
chr4 (73-238)||(5306664-5306834)
chr4 (73-224)||(9832317-9832468)
chr4 (73-183)||(20639662-20639775)
chr4 (73-183)||(7909284-7909396)
chr4 (73-238)||(16911526-16911695)
chr4 (73-210)||(29207902-29208039)
chr4 (88-219)||(17043413-17043546)
chr4 (73-237)||(8473624-8473790)
chr4 (73-228)||(44363134-44363293)
chr4 (73-182)||(25629069-25629180)
chr4 (79-238)||(55766476-55766637)
chr4 (79-219)||(54175046-54175190)
chr4 (73-238)||(23501757-23501920)
chr4 (73-178)||(51865042-51865149)
chr4 (81-162)||(30690188-30690270)
chr4 (79-224)||(32478802-32478942)
chr4 (73-201)||(47443958-47444088)
chr4 (79-226)||(35567146-35567295)
chr4 (83-238)||(37494815-37494972)
chr4 (90-182)||(49796818-49796911)
chr4 (78-219)||(19027831-19027974)
chr4 (73-226)||(47441534-47441689)
chr4 (81-238)||(55830733-55830892)
chr4 (73-238)||(13256403-13256568)
chr4 (85-228)||(14983808-14983953)
chr4 (80-226)||(54730225-54730376)
chr4 (73-219)||(39077800-39077946)
chr4 (73-151)||(10277761-10277839)
chr4 (82-151)||(20908649-20908719)
chr4 (87-219)||(49938611-49938742)
chr4 (92-219)||(7385499-7385628)
chr4 (73-151)||(20225127-20225207)
chr4 (89-216)||(25463108-25463237)
chr4 (80-238)||(30352591-30352762)
chr4 (88-238)||(10660368-10660521)
chr4 (88-238)||(10874513-10874666)
chr4 (73-140)||(38786673-38786740)
chr4 (80-238)||(30496333-30496491)
chr4 (73-131)||(38755912-38755970)
chr4 (87-226)||(39029078-39029220)
chr4 (82-219)||(41018807-41018945)
chr4 (73-143)||(33836491-33836563)
chr4 (73-133)||(11394923-11394983)
chr4 (73-133)||(11404650-11404710)
chr4 (79-183)||(9987844-9987950)
chr4 (73-130)||(32484307-32484364)
chr4 (73-122)||(40553941-40553990)
chr4 (79-226)||(54966997-54967144)
chr4 (83-238)||(20405057-20405210)
chr4 (82-183)||(21489106-21489210)
chr4 (79-131)||(50555666-50555718)
chr4 (130-227)||(25343162-25343261)
chr4 (73-162)||(36816388-36816479)
chr4 (73-131)||(25388249-25388307)
chr4 (73-119)||(35532077-35532123)
chr4 (83-132)||(47482864-47482913)
chr4 (85-162)||(30581481-30581560)
chr4 (151-226)||(42164232-42164307)
chr4 (81-126)||(37038135-37038180)
chr4 (73-130)||(44718641-44718698)
chr4 (73-148)||(2813181-2813259)
chr4 (81-148)||(12711461-12711528)
chr4 (89-151)||(3580860-3580922)
chr4 (79-161)||(16494259-16494344)
chr4 (79-133)||(28494222-28494276)
chr4 (85-217)||(32629285-32629418)
chr4 (73-211)||(7038044-7038183)
chr4 (73-106)||(19425923-19425956)
chr4 (73-106)||(48033424-48033457)
chr4 (83-131)||(8820581-8820629)
[»] chr3 (63 HSPs)
chr3 (73-235)||(26869696-26869859)
chr3 (73-238)||(40272816-40272983)
chr3 (73-226)||(22609764-22609918)
chr3 (73-238)||(13628794-13628964)
chr3 (73-238)||(13730606-13730775)
chr3 (73-238)||(22122921-22123086)
chr3 (73-238)||(46421038-46421208)
chr3 (73-238)||(1217076-1217241)
chr3 (73-238)||(39203502-39203667)
chr3 (73-238)||(52926223-52926381)
chr3 (73-238)||(16735427-16735593)
chr3 (88-238)||(8247706-8247860)
chr3 (73-238)||(12914039-12914206)
chr3 (73-238)||(29366724-29366893)
chr3 (73-183)||(54484731-54484844)
chr3 (80-238)||(6411833-6411992)
chr3 (81-226)||(26573125-26573272)
chr3 (79-238)||(7696902-7697056)
chr3 (73-238)||(25517174-25517344)
chr3 (73-192)||(31592881-31593000)
chr3 (82-225)||(34420656-34420802)
chr3 (79-161)||(34771374-34771457)
chr3 (73-216)||(516417-516565)
chr3 (73-238)||(5173723-5173892)
chr3 (73-161)||(15797284-15797373)
chr3 (81-192)||(10795435-10795550)
chr3 (79-192)||(14986989-14987106)
chr3 (73-178)||(45786218-45786327)
chr3 (79-183)||(45948848-45948954)
chr3 (73-162)||(353353-353445)
chr3 (73-181)||(49013477-49013589)
chr3 (73-219)||(7942995-7943143)
chr3 (85-211)||(33926096-33926224)
chr3 (100-178)||(47624088-47624167)
chr3 (81-209)||(54374357-54374488)
chr3 (73-234)||(4495680-4495831)
chr3 (79-226)||(53996575-53996725)
chr3 (86-238)||(9607189-9607345)
chr3 (142-238)||(10870025-10870122)
chr3 (88-162)||(9276327-9276401)
chr3 (79-147)||(829452-829521)
chr3 (81-225)||(25944468-25944615)
chr3 (73-135)||(24851305-24851367)
chr3 (89-216)||(30928167-30928296)
chr3 (73-183)||(43114872-43114986)
chr3 (73-211)||(54032575-54032703)
chr3 (124-226)||(45620883-45620988)
chr3 (79-182)||(52428480-52428592)
chr3 (73-122)||(10484620-10484669)
chr3 (79-201)||(44403565-44403690)
chr3 (73-129)||(30452892-30452948)
chr3 (73-117)||(47624208-47624252)
chr3 (158-233)||(11461732-11461807)
chr3 (73-144)||(24577917-24577988)
chr3 (81-162)||(31904868-31904951)
chr3 (79-146)||(50624963-50625030)
chr3 (79-183)||(19731043-19731149)
chr3 (79-211)||(45139488-45139622)
chr3 (73-109)||(40390358-40390394)
chr3 (79-192)||(55401208-55401324)
chr3 (79-146)||(26292410-26292477)
chr3 (83-140)||(46169981-46170038)
chr3 (73-109)||(14266376-14266412)
[»] chr7 (70 HSPs)
chr7 (79-238)||(2541029-2541191)
chr7 (73-238)||(32758225-32758390)
chr7 (73-238)||(21172013-21172178)
chr7 (73-238)||(42798633-42798800)
chr7 (73-235)||(11617592-11617756)
chr7 (80-238)||(40463841-40464000)
chr7 (73-238)||(10693077-10693242)
chr7 (79-238)||(35334826-35334985)
chr7 (73-238)||(42805488-42805657)
chr7 (73-219)||(42391104-42391250)
chr7 (73-238)||(48735126-48735292)
chr7 (73-234)||(34626212-34626374)
chr7 (81-228)||(33871922-33872070)
chr7 (73-238)||(27629598-27629765)
chr7 (73-201)||(7879639-7879769)
chr7 (73-238)||(47716423-47716592)
chr7 (79-183)||(38604546-38604652)
chr7 (73-238)||(47077859-47078024)
chr7 (73-211)||(38262200-38262340)
chr7 (73-238)||(43557436-43557606)
chr7 (73-237)||(19426894-19427059)
chr7 (73-201)||(18512457-18512586)
chr7 (79-238)||(22698977-22699141)
chr7 (81-237)||(42476838-42476994)
chr7 (89-227)||(13805077-13805216)
chr7 (73-151)||(27889320-27889398)
chr7 (98-238)||(46354158-46354302)
chr7 (79-226)||(19265791-19265938)
chr7 (81-227)||(39123865-39124018)
chr7 (83-226)||(23419688-23419833)
chr7 (73-177)||(35787273-35787378)
chr7 (76-238)||(2662943-2663102)
chr7 (75-238)||(14732827-14732993)
chr7 (73-219)||(11741778-11741924)
chr7 (79-181)||(18747507-18747612)
chr7 (90-162)||(19266491-19266564)
chr7 (79-226)||(28362156-28362304)
chr7 (81-151)||(45018935-45019009)
chr7 (73-183)||(1408476-1408588)
chr7 (73-183)||(31591113-31591223)
chr7 (73-211)||(29907410-29907549)
chr7 (88-236)||(28078151-28078300)
chr7 (84-226)||(3469190-3469338)
chr7 (94-238)||(7644921-7645066)
chr7 (93-226)||(14099030-14099165)
chr7 (93-226)||(14409047-14409182)
chr7 (151-238)||(18326998-18327085)
chr7 (79-195)||(21566442-21566561)
chr7 (80-151)||(23231610-23231681)
chr7 (78-152)||(36267826-36267901)
chr7 (79-223)||(32233145-32233290)
chr7 (151-238)||(42495919-42496006)
chr7 (131-237)||(1423972-1424080)
chr7 (158-234)||(7794597-7794673)
chr7 (82-172)||(21139761-21139852)
chr7 (81-120)||(42495874-42495913)
chr7 (93-226)||(48123508-48123643)
chr7 (84-226)||(42101899-42102044)
chr7 (83-147)||(8148960-8149023)
chr7 (84-132)||(33500587-33500635)
chr7 (73-109)||(36602542-36602578)
chr7 (113-183)||(15108441-15108512)
chr7 (79-179)||(16341301-16341404)
chr7 (85-162)||(17048831-17048910)
chr7 (73-144)||(23618981-23619052)
chr7 (88-226)||(44123641-44123780)
chr7 (73-147)||(23065929-23066003)
chr7 (80-148)||(13792161-13792230)
chr7 (80-109)||(25434115-25434144)
chr7 (78-146)||(1524182-1524250)
[»] chr1 (77 HSPs)
chr1 (73-228)||(27474278-27474434)
chr1 (73-238)||(18944630-18944800)
chr1 (73-238)||(34725102-34725267)
chr1 (74-233)||(23768325-23768486)
chr1 (73-238)||(45402082-45402250)
chr1 (73-238)||(46991791-46991958)
chr1 (80-228)||(6925097-6925247)
chr1 (81-238)||(32632569-32632727)
chr1 (73-238)||(38478286-38478451)
chr1 (73-238)||(46247957-46248124)
chr1 (76-237)||(47214499-47214660)
chr1 (73-228)||(41319810-41319967)
chr1 (73-215)||(10668235-10668381)
chr1 (80-238)||(30395737-30395899)
chr1 (73-238)||(20004094-20004263)
chr1 (73-238)||(45812541-45812706)
chr1 (79-238)||(14617025-14617186)
chr1 (73-211)||(35253191-35253329)
chr1 (73-162)||(4349702-4349792)
chr1 (82-238)||(12126850-12127006)
chr1 (83-227)||(27201645-27201793)
chr1 (73-183)||(31382218-31382329)
chr1 (124-240)||(4430081-4430199)
chr1 (89-211)||(11596527-11596650)
chr1 (89-226)||(18724565-18724704)
chr1 (73-227)||(19414437-19414591)
chr1 (73-209)||(35005139-35005279)
chr1 (79-227)||(6983821-6983969)
chr1 (79-161)||(10378745-10378828)
chr1 (79-238)||(18741967-18742132)
chr1 (79-226)||(35117775-35117927)
chr1 (73-162)||(42304211-42304303)
chr1 (79-227)||(20036218-20036368)
chr1 (81-181)||(22324937-22325039)
chr1 (78-226)||(2435795-2435946)
chr1 (104-238)||(22930104-22930238)
chr1 (73-151)||(1517315-1517393)
chr1 (79-227)||(15511158-15511311)
chr1 (118-241)||(33222968-33223093)
chr1 (80-148)||(15505643-15505710)
chr1 (91-225)||(25468285-25468421)
chr1 (79-225)||(44485120-44485267)
chr1 (73-238)||(8197030-8197197)
chr1 (81-225)||(19701570-19701717)
chr1 (79-184)||(23796506-23796613)
chr1 (84-150)||(4430014-4430080)
chr1 (79-238)||(9939447-9939612)
chr1 (79-160)||(43768205-43768287)
chr1 (79-151)||(20999860-20999932)
chr1 (73-132)||(50606498-50606557)
chr1 (74-136)||(4587568-4587630)
chr1 (82-162)||(50812004-50812085)
chr1 (81-162)||(19932765-19932849)
chr1 (79-162)||(31442399-31442484)
chr1 (79-151)||(35019306-35019377)
chr1 (99-181)||(21723728-21723811)
chr1 (85-209)||(31272397-31272516)
chr1 (81-146)||(4249455-4249520)
chr1 (81-146)||(4249779-4249844)
chr1 (81-146)||(4250103-4250168)
chr1 (82-181)||(19974087-19974188)
chr1 (79-132)||(30555210-30555263)
chr1 (82-134)||(33594144-33594196)
chr1 (83-226)||(17470361-17470505)
chr1 (81-151)||(45264411-45264482)
chr1 (112-165)||(21910692-21910746)
chr1 (81-147)||(28894570-28894636)
chr1 (89-139)||(30682900-30682950)
chr1 (85-149)||(6358199-6358264)
chr1 (79-144)||(23371206-23371270)
chr1 (73-122)||(25554746-25554795)
chr1 (83-184)||(34148974-34149077)
chr1 (73-132)||(41440606-41440665)
chr1 (79-182)||(39214968-39215074)
chr1 (81-122)||(16120821-16120862)
chr1 (85-145)||(10158281-10158341)
chr1 (170-238)||(34714610-34714678)
[»] scaffold0168 (1 HSPs)
scaffold0168 (73-238)||(30543-30708)
[»] chr6 (41 HSPs)
chr6 (73-238)||(1354761-1354926)
chr6 (73-238)||(1346928-1347093)
chr6 (73-223)||(29355859-29356013)
chr6 (73-238)||(12221918-12222088)
chr6 (81-226)||(9161099-9161247)
chr6 (73-183)||(25557744-25557854)
chr6 (79-238)||(3815087-3815248)
chr6 (73-183)||(26097179-26097289)
chr6 (73-234)||(2166414-2166579)
chr6 (73-234)||(2178047-2178212)
chr6 (73-141)||(13267788-13267856)
chr6 (80-147)||(23930138-23930205)
chr6 (86-192)||(32579436-32579543)
chr6 (82-209)||(7947384-7947514)
chr6 (85-238)||(24097545-24097696)
chr6 (82-209)||(23240837-23240964)
chr6 (73-148)||(3116133-3116210)
chr6 (73-131)||(6808468-6808526)
chr6 (73-148)||(12885967-12886044)
chr6 (73-146)||(383764-383837)
chr6 (73-147)||(12892064-12892140)
chr6 (80-238)||(1941819-1941979)
chr6 (136-238)||(8409207-8409311)
chr6 (82-238)||(15866052-15866208)
chr6 (80-151)||(33138886-33138957)
chr6 (76-201)||(28007629-28007753)
chr6 (75-238)||(20400631-20400796)
chr6 (158-238)||(14975171-14975251)
chr6 (79-181)||(18277203-18277307)
chr6 (79-137)||(10734915-10734974)
chr6 (79-137)||(11395827-11395886)
chr6 (79-226)||(13904991-13905138)
chr6 (73-122)||(30786378-30786427)
chr6 (75-143)||(22967237-22967305)
chr6 (75-143)||(23821088-23821156)
chr6 (73-141)||(14975094-14975164)
chr6 (83-226)||(12889402-12889548)
chr6 (82-140)||(15865870-15865928)
chr6 (81-225)||(32728169-32728314)
chr6 (131-233)||(6024202-6024306)
chr6 (83-142)||(19340889-19340949)
[»] scaffold0258 (1 HSPs)
scaffold0258 (73-238)||(13028-13194)
[»] scaffold0057 (4 HSPs)
scaffold0057 (73-238)||(46795-46962)
scaffold0057 (83-238)||(24786-24938)
scaffold0057 (82-182)||(43679-43780)
scaffold0057 (83-132)||(46721-46770)
[»] scaffold0311 (1 HSPs)
scaffold0311 (82-238)||(10774-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (73-238)||(10054-10219)
scaffold0187 (73-238)||(20382-20547)
[»] scaffold0223 (1 HSPs)
scaffold0223 (81-238)||(11096-11252)
[»] scaffold0015 (1 HSPs)
scaffold0015 (73-181)||(48638-48746)
[»] scaffold0180 (1 HSPs)
scaffold0180 (73-151)||(24137-24215)
[»] scaffold0049 (1 HSPs)
scaffold0049 (73-238)||(58941-59110)
[»] scaffold1176 (1 HSPs)
scaffold1176 (81-227)||(1599-1745)
[»] scaffold0018 (1 HSPs)
scaffold0018 (81-174)||(72879-72974)
[»] scaffold0954 (1 HSPs)
scaffold0954 (80-151)||(3597-3668)
[»] scaffold0036 (1 HSPs)
scaffold0036 (114-216)||(35062-35167)
[»] scaffold0194 (1 HSPs)
scaffold0194 (73-148)||(24704-24779)
[»] scaffold0254 (1 HSPs)
scaffold0254 (106-234)||(4125-4258)
[»] scaffold0167 (1 HSPs)
scaffold0167 (89-211)||(23590-23714)
[»] scaffold0116 (1 HSPs)
scaffold0116 (155-229)||(8864-8938)


Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 24859992 - 24860164
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagaga 172  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||     
T  24859992 ggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcctaccatgtttttacaccagagg 24860091  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaagatacaat 245  Q
     ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  24860092 ttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaagatacaat 24860164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 8455320 - 8455487
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgt-ttttacactaga 170  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||    
T  8455320 ggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaaga 8455419  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  8455420 ggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 8455487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 25249742 - 25249908
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  25249742 ggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagag 25249841  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||| | ||| |||| || ||||| ||||||||| ||||||| |||||||  |||||||||    
T  25249842 actgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaag 25249908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 12023929 - 12024089
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtt 177  Q
    |||||||| ||||||| ||  |||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  12023929 ccggtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtt 12024028  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  12024029 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 9671310 - 9671144
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  9671310 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 9671212  T
Q  172 actgtttccagggcttaaacctgtaac-cttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     |||||||||||  || |||| || ||  |||||||||||| ||||||| |||||| | |||||||||    
T  9671211 gctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaag 9671144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 11514566 - 11514400
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt-acactaga 170  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||| ||  ||||||| |||| |||    
T  11514566 ggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttacacaaga 11514468  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | |||||||||||  || |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  11514467 ggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 11514400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 14444851 - 14444720
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||| |||||||||||||||| |||| |||||||    
T  14444851 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttc 14444752  T
Q  180 cagggcttaaacctgtaaccttccagtcacat 211  Q
    |||| ||| |||| || |||||||||||||||    
T  14444751 caggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 10543831 - 10543662
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||||||| ||||||||| |    
T  10543831 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 10543732  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| | ||||||||| ||| |||| || ||||| ||||||||| ||||||| |||| ||| |||||||||    
T  10543731 gaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaag 10543662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 14530451 - 14530282
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||| |||| ||||||| |||||| || |    
T  14530451 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaa 14530352  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  14530351 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 14530282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 21779265 - 21779430
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||    
T  21779265 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttacacaagag 21779363  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     |||| |||||| ||| |||| || ||||| ||||||||| ||||||| || ||||| |||||||||    
T  21779364 gctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaag 21779430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 17668133 - 17667976
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| |||||||||||||||||||  ||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  17668133 ggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17668034  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |  | |||||||| ||| |||| || ||||||||||||||| ||||||| ||||||||    
T  17668033 ggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 17667976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 10546294 - 10546153
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactag 169  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| || ||    
T  10546294 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaag 10546195  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    ||  |||||||||| ||| |||| || ||||| |||||||||    
T  10546194 aggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 36871622 - 36871512
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  36871622 ggcaacccggtgcactaaagctcccgcatacgcaggt-ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaagag 36871524  T
Q  172 actgtttccagg 183  Q
     |||||||||||    
T  36871523 gctgtttccagg 36871512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 17623695 - 17623538
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| || ||||||||||||| || ||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  17623695 ggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17623596  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |  |||||| ||| ||| |||| || ||||||||||| ||| ||||||| ||||||||    
T  17623595 ggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccag 17623538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 25079721 - 25079889
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactag 169  Q
    ||||| |||||||||||||||||  |||||||||||| |||||||||||| |||||||| ||||||||||||||| || |||| ||  ||||||||| ||    
T  25079721 ggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaag 25079820  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||  |||||| | | ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  25079821 aggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 25079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 22371158 - 22371021
Alignment:
Q  100 atacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagggcttaaacctgtaac 198  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||| ||| |||| || ||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgac 22371061  T
Q  199 cttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || |||||||||| ||||||| |||||||| || ||||||    
T  22371060 ctcccagtcacatgacaacaactttaccagttgggccaag 22371021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 23397895 - 23397730
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| | |||| ||| |||||||| |||||||||||||||||||||| |||| ||||||  |||||||| ||||    
T  23397895 ggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccct-attttacacaagag 23397797  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| ||||  | ||||| ||||||||| ||||||| |||||||| ||| |||||    
T  23397796 gctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaag 23397730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 24200627 - 24200786
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||| | ||||| ||||| |||||||||| | ||||||  ||||||||||||||||||||| ||||||| ||||||||| |    
T  24200627 ggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 24200726  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    ||| ||||||||||| ||| |||| || || || ||||||||| ||||||| ||||||||    
T  24200727 gaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccag 24200786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 27573751 - 27573585
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||| ||||||||||||||| ||||| |||||   |||||  ||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||    
T  27573751 ggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttatacacaagag 27573652  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||| || || ||| ||||  | ||||| ||||||||| ||||||| |||||||| |||||||||    
T  27573651 gctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaag 27573585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 39914310 - 39914475
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt--acactag 169  Q
    ||||| ||| ||||||||||||||||||||||||||| | || ||||||| |||||||| |||||||||||| || ||| |||||||||||  |||| ||    
T  39914310 ggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaag 39914408  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgcca 236  Q
    ||  |||||||||  ||| | || || ||||||||||||||| ||||||| |||||||| |||||||    
T  39914409 aggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 26684626 - 26684789
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccc---tgtttttacactaga- 170  Q
    |||||||||||| ||||||||||||||||||||||  ||||||| ||| ||||||||| || |||||||||||||||  ||   | ||||||||| |||     
T  26684626 caatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagag 26684725  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
    | |||||| |||| ||||||||| | ||||| || |||||| ||||||| |||||||| |||||    
T  26684726 gtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 17896381 - 17896223
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccc--tgtttttacactagagactgtttc 179  Q
    ||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| |||||||||||||| |||||  | ||||||||| ||||  ||||||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttc 17896282  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| ||| || | || ||||| | ||||||| ||||||| |||||||| |||| ||||    
T  17896281 taggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaag 17896223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 25641630 - 25641487
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccctgtttttacactagagac 173  Q
    ||||||||| ||||||||||| ||||||||||||   ||||||||||| |||| ||||||||||||||||||| |  ||||||||||| |||| | |  |    
T  25641630 caatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgc 25641531  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaac 217  Q
    |||||||||| ||| |||| || ||||| ||||||||| |||||    
T  25641530 tgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 30826164 - 30826058
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagac 173  Q
    ||||| |||||||||||||||||||||| | |||| | |||||||| |||||||||||||||||||||||||| || |||||| ||||||||| |||| |    
T  30826164 caatctggtgcactaaagctcccgcatatgtagggtctgggaaggg-ttccaccatttggtgtattgtacgcaaccttaccctatttttacacaagaggc 30826066  T
Q  174 tgtttcca 181  Q
    ||||||||    
T  30826065 tgtttcca 30826058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 40762238 - 40762349
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||||| ||||||||||| || |||| |||| |||||||||||||||||||||| |||| ||||| | ||||||||| |||    
T  40762238 ggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacacaaga 40762337  T
Q  171 gactgtttccag 182  Q
    | ||||||||||    
T  40762338 ggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 99281 - 99421
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagg 183  Q
    ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||| | || |||||||  || |||| ||||||| |||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttt-tacaagaggctgtttctagg 99379  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
     ||| |||| || ||||| ||||||| | ||||||| |||||    
T  99380 acttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 5841154 - 5841006
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccct-gtttttacactagagactg 175  Q
    ||||||||||||||||||||||| || ||| |||||||||||| |||||||  ||| ||||||||||||| || ||||||  ||||||||| | || |||    
T  5841154 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctg 5841055  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaatttta 224  Q
    |||| ||| ||| |||| || ||||||||||||||| ||||||| ||||    
T  5841054 tttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 14544189 - 14544027
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtg--tattgtacgcag-cctaccctgtttt--tacactagagactg 175  Q
    ||||||||||||||||||||||||||||| || ||||||||| | |||||||  ||  ||||| |||||| | |||||||||||  ||||| |||| |||    
T  14544189 ggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacacaagaggctg 14544090  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||  | |  |||||||||||| ||||||||| ||||||| |||||||  |||||||||    
T  14544089 tttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaag 14544027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 21377085 - 21377232
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtt 177  Q
    |||||||| ||||||||| |||||||||||  ||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||| ||||  ||||    
T  21377085 cggtgcac-aaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtt 21377183  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || | | ||| |||  |||||||| ||||||||| ||||||| ||||||    
T  21377184 tctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 4516361 - 4516510
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccctg-tttttacactagagactgt 176  Q
    ||||| |||||||||| || ||||||||||| |||||||||||| |||||| |||||||||||||||||||  | ||||| ||||||||| |||| ||||    
T  4516361 ccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgt 4516460  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||| ||  ||| ||  ||| ||||| ||||||| | ||||||| ||||||    
T  4516461 ttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 7214659 - 7214499
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttg--gtgtattgtacgcagcct-accctgt-ttttacactagagactgt 176  Q
    ||||||||||| ||| ||||||||||| | ||| |||||| |  ||||||||   |||||||||||||||||| ||||||| |||||||| |||||||||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgt 7214560  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||||| | ||| ||||  | ||||| ||||||||| ||||||| |||||||| || |||||    
T  7214559 ttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaa 7214499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 219
Target Start/End: Original strand, 17380248 - 17380388
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||| |||||||||||||| || || || |||||||||| ||||| ||||  ||||    
T  17380248 ccggtgcac-aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtt 17380346  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
    |||| | ||| |||| || ||||| | ||||||| |||||||    
T  17380347 tccaagacttgaacccgtgacctttcggtcacatgacaacaa 17380388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 24890533 - 24890464
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||||| |||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagcct 24890464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 238
Target Start/End: Original strand, 19977721 - 19977885
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagac 173  Q
    |||| ||||||||||||||||||||||| || ||  ||||||||| | |||||||||||||||||||||||| || || |||  ||||||||  |||| |    
T  19977721 aatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggc 19977820  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||  ||| |||| || ||||| | ||||||| ||||||| || ||||| | |||||||    
T  19977821 tgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaag 19977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 44643648 - 44643576
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    |||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||  ||||||||||||||    
T  44643648 ccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagcct 44643576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 25632640 - 25632562
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||| |||||||||||||||||||||||||| | ||  ||||||||  | ||||||||||||||||||||||||||||    
T  25632640 ggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagcct 25632562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 32781308 - 32781382
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgttttt 162  Q
    ||||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttt 32781382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 40416875 - 40417031
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||| |||||| |||||| ||   || |||| ||| || |||||||||||||| ||||| | ||||| |||||| || |||    
T  40416875 ggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaaga 40416974  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    |  |||||||| | ||| |||| || ||||||||||||||| ||||||| |||||||    
T  40416975 ggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 23488613 - 23488555
Alignment:
Q  74 gcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 40579753 - 40579810
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat 130  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  40579753 ggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 44604905 - 44604832
Alignment:
Q  151 taccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaatttta 224  Q
    |||||||||||||||| ||||  |||||||||| ||| ||||||| ||||||||||||||| ||||||| ||||    
T  44604905 taccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 5450376 - 5450263
Alignment:
Q  114 ggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcaca 210  Q
    ||||||||| ||||| ||||||||||||||||||||| |||| ||  ||||||||| ||||  ||||||||||  || |||| || ||||| ||||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcaca 5450277  T
Q  211 tcacaacaatttta 224  Q
    | ||||||| ||||    
T  5450276 tgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 13245111 - 13245177
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    |||||||||||||| ||| ||| || |||||||||||| ||||||||| ||||| ||||||||||||    
T  13245111 cactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagcct 13245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 19185760 - 19185806
Alignment:
Q  86 actaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattt 19185806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccacca 129  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 39499236 - 39499310
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc 149  Q
    ||||| ||||||||||||||||||||||||||||   ||  ||||| | |||||||||| |||||||||||||||    
T  39499236 caatctggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagc 39499310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 31158445 - 31158502
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||| |||| |||||||||||||||||||||||| | |||||||||| |||||||||    
T  31158445 caatcaggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 31158502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 31523353 - 31523296
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtat 139  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||||||||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 41409993 - 41409936
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat 130  Q
    ||||| |||||||||| ||||||||||||| |||||| |||||||||||| |||||||    
T  41409993 ggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaa 117  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 17705567 - 17705459
Alignment:
Q  132 tggtgtattgtacgcagcc-taccctgtt-tttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagc 229  Q
    ||||||||||||| ||||| ||| ||||| ||||||| |||| | ||||||||| ||| |||| || |||||| |||||||| ||||||| ||||||||     
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagt 17705468  T
Q  230 tgcgccaag 238  Q
    ||| |||||    
T  17705467 tgcaccaag 17705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 22371243 - 22371199
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaa 117  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||    
T  22371243 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 34080232 - 34080176
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca 129  Q
    ||||| ||||||||||||| |||||||||| |||||| |||||||||||| ||||||    
T  34080232 ggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 19615116 - 19614983
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcag-cctaccctg-tttttacactagagactgt 176  Q
    |||||||||||||||| ||||||||||||  |||||||||| ||||| ||  ||||| |||||||||||| | ||||||| |||||| || ||||  |||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaagggg-tccactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgt 19615018  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacat 211  Q
    ||| ||| ||| |||| || ||||| |||||||||    
T  19615017 ttcaaggacttgaacccgtgacctttcagtcacat 19614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 24059012 - 24059067
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtatt 140  Q
    ||||||||||||| ||||||||||| |||| ||||||| ||||||| |||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 44449395 - 44449466
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct 151  Q
    |||||| |||| ||||| || |||||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  44449395 ggtgcattaaaactcccacaaacgcagggtccgggaaggggtcccactattttggtgtattgtacgcagcct 44449466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 30864424 - 30864530
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagact 174  Q
    ||||||||||||  ||||| ||||||||||||||   ||||| || |   |||||||||| ||||||||||| || |||||| ||||||||| |||| ||    
T  30864424 aatccggtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggct 30864523  T
Q  175 gtttcca 181  Q
    |||||||    
T  30864524 gtttcca 30864530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 31525837 - 31525771
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtat 139  Q
    ||||||||||| |||||||||||||||||| |||||| | || || |||| ||| ||||||||||||    
T  31525837 ggcaatccggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 8576018 - 8575977
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  8576018 ggtgcactaaagctcccacatacgcagggtccgggaaggggt 8575977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 23145740 - 23145857
Alignment:
Q  111 ccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtca 208  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||| ||| ||||||||| |||| |||||| || | ||| |||| || ||||| ||||||    
T  23145740 ccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtca 23145839  T
Q  209 catcacaacaattttacc 226  Q
    |   ||||||| ||||||    
T  23145840 cgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 23557530 - 23557647
Alignment:
Q  111 ccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtca 208  Q
    ||||||| |||| |||||| |||||||||||||||||||| ||| ||| ||||||||| |||| |||||| || | ||| |||| || ||||| ||||||    
T  23557530 ccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtca 23557629  T
Q  209 catcacaacaattttacc 226  Q
    |   ||||||| ||||||    
T  23557630 cgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 33795400 - 33795261
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgta-ttgtacgcagcc-taccctg-tttttacactagagactgtttccagggc 185  Q
    ||||||||||||||| ||||| | |||||||||| |||||| | |||||| |||||||||||| ||||||| ||||||| | ||||  ||||||| || |    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  186 ttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || |||| || ||||| || |||| | ||||||| ||||||    
T  33795301 ttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 1289154 - 1289095
Alignment:
Q  73 ggcaatccggtgcactaaa-gctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||||| ||||||||    
T  1289154 ggcaatccggtgcactaaaagctcccgcatatgcatgatccgggaaggggtcccaccatt 1289095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 17471676 - 17471605
Alignment:
Q  78 tccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcag 148  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||  || || |||||| ||||||||||||    
T  17471676 tccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcag 17471605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 31821355 - 31821418
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtac 144  Q
    |||||| |||||||||||||||| ||||   ||| ||||||| ||| |||||||||||||||||    
T  31821355 ggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtac 31821418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 3633719 - 3633761
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||||||||||||||||||||| || ||| ||||||||||||    
T  3633719 cggtgcactaaagctcccgcatatgcggggtccgggaaggggt 3633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 4794924 - 4794871
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggt 135  Q
    |||||||| |||||||||||| |||||  |||||||||||| ||| ||||||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatttggt 4794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 45235833 - 45235976
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgt--ttttacactagagactgtttcca 181  Q
    |||||||||||| ||||||| |||| | || ||||||| ||||||||| |||||||  ||| |||| |||||| |  |||||||  |||||||||||| |    
T  45235833 cactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttcta 45235932  T
Q  182 gggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    || ||| |||  || | ||| ||||||||| | ||||| |||||    
T  45235933 ggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 35261810 - 35261643
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| || ||||||| ||||||||| |||    
T  35261810 ggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaaga 35261711  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||||||||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  35261710 gactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 35261643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 13160832 - 13160669
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  13160832 ggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 13160733  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgcc 235  Q
     ||||||| ||| ||| |||| || ||||| ||||||||| ||||||| |||||||| ||||||    
T  13160732 gctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 28817630 - 28817797
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||| |||    
T  28817630 ggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaaga 28817729  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| ||| |||||    
T  28817730 ggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaag 28817797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 36720919 - 36720760
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgttt 178  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||    
T  36720919 ggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 36720820  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||| ||| |||| || ||||||||||||||| ||||||| |||||||| | |||||||    
T  36720819 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaag 36720760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 12670260 - 12670419
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||    
T  12670260 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtt 12670358  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  12670359 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12670419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 30454101 - 30454266
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagaga 172  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||  |||  |||||||| ||||     
T  30454101 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttacacaagagg 30454200  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  30454201 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 30454266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 45071395 - 45071239
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  45071395 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 45071296  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
     ||||||||||  ||| |||| || ||||| || |||||| ||||||| ||||||||    
T  45071295 gctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccag 45071239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 79 - 238
Target Start/End: Complemental strand, 44530274 - 44530113
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||  |||    
T  44530274 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgt 44530175  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||| | ||| |||| || |||||| |||||||| ||| ||| |||||||| |||||||||    
T  44530174 ttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaag 44530113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 74 - 238
Target Start/End: Original strand, 29521690 - 29521856
Alignment:
Q  74 gcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagag 171  Q
    |||| ||||||||||||||||||||||||||||||| | |||| ||| | ||||||||||||||||||||||||||| ||||||| |||||| || ||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagag 29521789  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||||||||||||  ||||||| |||| ||| |||||||||    
T  29521790 gctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaag 29521856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 39460998 - 39461167
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||  |||||||||||||||||||| ||| ||| ||||||||| |    
T  39460998 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaa 39461097  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||| ||||| ||| ||||||| |||||||| |||||||||    
T  39461098 gaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaag 39461167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 17823707 - 17823538
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccct-gtttttacactaga 170  Q
    ||||| |||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||| ||||||| | || ||| |||||||||| |||    
T  17823707 ggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaaga 17823608  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaagat 240  Q
    | ||||||||||| ||| |||| || ||||| | ||||||| ||||||| |||||||| |||||||||||    
T  17823607 ggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagat 17823538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 7136537 - 7136700
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctg-tttttacactagagact 174  Q
    |||||||||||||||||||||||| || ||| |||||||||||| ||||||||  |||||||||||||||||||| |||||| ||||||||| ||||  |    
T  7136537 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggtt 7136636  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||| ||| ||||  | ||||||||||||||| ||||||| |||||||| |||||||||    
T  7136637 gtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaag 7136700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 18164764 - 18164932
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagag 171  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||  |||  || | |||||||||||||||||| ||| ||||||||||||||| ||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttacacaagag 18164863  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaagat 240  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| || ||| | |||||||||||    
T  18164864 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagat 18164932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 6760955 - 6760786
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| ||| |||||||| ||||||||  |||||||||||||| ||||| ||||||||||| |||| |    
T  6760955 ggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaa 6760856  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || |||||| ||||| || ||||||| |||||||| |||||||||    
T  6760855 gaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaag 6760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 25250655 - 25250486
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcc-taccctgttttt-acacta 168  Q
    ||||| ||||||||||||| |||||||||| || |||  ||||||||||| ||||||||  ||||||||||||||||||| |||||| ||||| |||| |    
T  25250655 ggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaa 25250556  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     || ||||||||||| ||| ||| ||| ||||||||||||||| ||||||| |||||||| || ||||||    
T  25250555 taggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaag 25250486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 2626653 - 2626483
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg----tttttacact 167  Q
    ||||||| |||||||| ||||||||||||| |||||| | |||||||||| ||| ||||||||||||||||||||| | |||||||    |||||||||     
T  2626653 ggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacaca 2626554  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||||| ||| |||| || ||||| | ||||||| ||||||| |||||||  |||||||||    
T  2626553 agaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaag 2626483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 12626021 - 12625858
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg--tttttacactag 169  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||| | |||||||  ||||||||| ||    
T  12626021 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaag 12625922  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcg 233  Q
    ||  |||||||||| ||| | || || |||| | |||||||  ||||||| |||||||| ||||    
T  12625921 aggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 20284079 - 20284232
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccc---tgtttttacactagaga 172  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| |||||   | |||||| || ||||     
T  20284079 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagagg 20284178  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||||    
T  20284179 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 29877217 - 29877113
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgttt 178  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| | || ||||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgttt 29877118  T
Q  179 ccagg 183  Q
    |||||    
T  29877117 ccagg 29877113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 28407534 - 28407380
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagaga 172  Q
    ||||| |||||||| ||||||||||||||||| |||| |||||||||||| |||||||||||||  ||           ||||||||||||||| ||||     
T  28407534 ggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtgcctt-----------accctgtttttacacaagagg 28407446  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  28407445 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 28407380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 21070707 - 21070861
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccc----tgtttttacactagag 171  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| |||||    | |||||| || ||||    
T  21070707 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagag 21070806  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||||    
T  21070807 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 228
Target Start/End: Original strand, 8897776 - 8897925
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgttt 178  Q
    |||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||| ||||||  ||||||||| || |  |||||    
T  8897776 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 8897875  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    ||||| ||| |||| || ||||| | ||||||| ||||||| ||||||||    
T  8897876 ccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccag 8897925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 24365071 - 24365218
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactagagactgt 176  Q
    |||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||  ||||||||| |||| ||||    
T  24365071 cggtgcac-aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgt 24365169  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    ||| ||||||| |||| || || ||  |||||||| ||||||| |||||    
T  24365170 ttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 20869523 - 20869667
Alignment:
Q  92 gctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtttccagggcttaaa 190  Q
    ||||||||||| |||||| ||||||||||||  ||||  |||||||||||||| |||||| |||||||||| |||| |||| ||||||||||| ||| ||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 20869619  T
Q  191 cctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  20869620 cccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 20869667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 5689761 - 5689662
Alignment:
Q  74 gcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagag 171  Q
    |||| ||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  5689761 gcaaaccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagag 5689662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 20870056 - 20869942
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| || ||||||||| |||||||  |||||||||||||||||||| ||||||| ||||||||| |    
T  20870056 ggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 20869957  T
Q  169 gagactgtttccagg 183  Q
    |||||||||||||||    
T  20869956 gagactgtttccagg 20869942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 19729471 - 19729363
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    |||||||| |||||||| |||||||| ||| |||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||  ||||    
T  19729471 ggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg-ttttacataagag 19729373  T
Q  172 actgtttcca 181  Q
    ||||||||||    
T  19729372 actgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 26954266 - 26954107
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt--acact 167  Q
    ||||| || ||||||||||||||||||||| ||  || | |||||||||| ||||||||  |||||||||||||||||||| |||||||||||  ||||     
T  26954266 ggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacaca 26954167  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    |||| ||||||||||| ||| |||| || |||||| | |||||| ||||||| |||||||    
T  26954166 agaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 5135300 - 5135414
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgt 176  Q
    ||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||  ||||||||| |||| ||||    
T  5135300 ccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgt 5135398  T
Q  177 ttccagggcttaaacc 192  Q
    ||||||| ||| ||||    
T  5135399 ttccaggacttgaacc 5135414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 31457303 - 31457156
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||||||||||||||| |||||||||||||||||||   |||||||||| | |||||||| |||||||||||||||| |  ||| ||||||||| ||||    
T  31457303 ggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacacaagag 31457204  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
      ||||| |||| ||| |||| || ||||| ||| ||||| |||||||    
T  31457203 gttgtttacaggacttgaacccgtgacctttcagccacatgacaacaa 31457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 8483948 - 8484063
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    ||||||| ||||||||||||||||||||||| | |||| ||||| |||||| |||||||||||||||||||| | ||||| ||||||||| ||||  |||    
T  8483948 ccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgt 8484047  T
Q  177 ttccagggcttaaacc 192  Q
    ||||||| ||| ||||    
T  8484048 ttccaggacttgaacc 8484063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 10857960 - 10857870
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||| |||||||||||||||||||||||||||| || || ||||| ||| |||||| |||||||||||| ||||||| ||||||||||||    
T  10857960 ggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgttttt 10857870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 26102648 - 26102578
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgta 143  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  26102648 ggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 44781517 - 44781665
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgt-ttttacactagagactgtt 177  Q
    |||||||||||||||||||||||||||| | |||| ||||| ||| ||  ||||||||||||||| ||||| |||||||| |||||||| ||||  ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||| ||| |||| || | ||| ||||||| | ||||||| ||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 389773 - 389686
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||||||||||||| ||||||||||||| | || ||||| | ||| |||||||||||||||||||| || ||||||||||||    
T  389773 aatccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgttttt 389686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 16225146 - 16225060
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcag-cctaccctgttttt 162  Q
    |||||||||||||||||||||||| || ||| |||||||||| | |||||||  |||||||||||||||||| | ||||||||||||    
T  16225146 ccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttt 16225060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 42083712 - 42083858
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgcagccta--ccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||| | ||| |||||  ||||||||||| ||||||||| ||| || ||||||||||||   |||  ||||||||| | || |||||||    
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttc 42083811  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||| ||| |||| || ||||| ||||||| | ||||||||||||||    
T  42083812 caggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 44742528 - 44742634
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    |||||||||||| |||||||||| || |||| ||  |||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||  |||| ||    
T  44742528 ccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattg 44742627  T
Q  176 tttccag 182  Q
    |||||||    
T  44742628 tttccag 44742634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 23000232 - 23000365
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||||||||||||||||         |||||||||||| |||||||||||||||||||| | | || |||| ||||||||||| ||||    
T  23000232 ggcaacccggtgcactaaagctcccgcat---------ccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagag 23000322  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaa 216  Q
     ||||||||||| |||  ||| || ||||| ||||||||| ||||    
T  23000323 gctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 22598279 - 22598133
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgttt 178  Q
    |||||||||||| ||||||||||||| || ||||||| ||||  ||||| ||||||||||||||  |||| ||||||| ||||||||| ||||  |||||    
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgttt 22598181  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||  || |||| || ||||| ||||||  | ||||||| ||||||    
T  22598180 ccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 238
Target Start/End: Complemental strand, 24245565 - 24245415
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccacca---tttggtgtattgtacgcag-cctaccctgtttttacactagagactgtttccagg 183  Q
    |||||||||||||||||||||| || ||||||||| |||| |   ||||||| |||||||| || | |||||||   |||||  |||||| |||||||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctg---ttacataagagac-gtttccagg 24245470  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| |||| || ||||| ||||||||| ||||||| |||||||| ||| |||||    
T  24245469 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaag 24245415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 27508035 - 27507985
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca 129  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  27508035 ccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 26457852 - 26457782
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||||| |||||||| || | ||  |||||| |||||| |||||||||||||||||||||    
T  26457852 ccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagcct 26457782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 27468096 - 27468141
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaag 118  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27468096 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 16013581 - 16013511
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgca 147  Q
    |||||||||||||||||||||||| |||||| | ||||||||||  |||||  ||| ||||||||||||||    
T  16013581 ccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 35107315 - 35107374
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||| |||||||||||||||| |||||||| ||| | |||||||||||| |||||||||    
T  35107315 ggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 40604910 - 40605075
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct--accctgtttttacactaga 170  Q
    |||||| ||||||||||||||||||||||||| ||||    |||| ||| |||| ||||| |||||||||||||| |||   ||   ||||||||| | |    
T  40604910 ggcaattcggtgcactaaagctcccgcatacgtagggtttcggaa-gggatccatcatttagtgtattgtacgcaaccttatccaattttttacacaaaa 40605008  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    || |||||||| | ||| ||||  ||| | |||| |||||| ||||||| |||||||| ||||||||    
T  40605009 gattgtttccatgacttgaacccataatcatccaatcacatgacaacaactttaccagttgcgccaa 40605075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 17250888 - 17250993
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtt 177  Q
    |||||||||||||||  |||||||||||  |||||| |||| |||||||  |||||||||||||||| ||| || |||| ||||||||| |||| ||| |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  178 tccagg 183  Q
    ||||||    
T  17250988 tccagg 17250993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 14017989 - 14018083
Alignment:
Q  90 aagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct-accctgttttt-acactagagactgtttcca 181  Q
    ||||| ||||||  |||||| || ||||| ||| |||||| ||| ||||||||||||||| || ||||||||||| |||| ||||||||||||||    
T  14017989 aagctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttcca 14018083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 11000970 - 11001031
Alignment:
Q  90 aagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||| |||||  |||||  |||| |||||| ||||||||||||||||||||| ||||||    
T  11000970 aagctcctgcataaacagggttcgggtaggggtcccaccatttggtgtattgtacacagcct 11001031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 18595969 - 18595920
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||| ||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  18595969 ggcaacccgatgcactaaaactcccgcatacacagggtccgggaaggggt 18595920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 36486570 - 36486627
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat 130  Q
    ||||| |||| ||||||||||||| ||||||||| || |||||||| ||| |||||||    
T  36486570 ggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 43942417 - 43942365
Alignment:
Q  113 gggaaggggttccaccattt--ggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||| |||||||||  |||||||||||||||||| ||||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 43942365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 41014449 - 41014283
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||||||||||||||||| || ||| || ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  41014449 ggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 41014350  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  41014349 gctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 41014283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 24449021 - 24448854
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactaga 170  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||| | |    
T  24449021 ggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaa 24448922  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  24448921 ggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 24448854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 38879714 - 38879545
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| |||||| || |    
T  38879714 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaa 38879615  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  38879614 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 38879545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 27328885 - 27328727
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| |||| |    
T  27328885 ggcaatccgatgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 27328786  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||||||||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||    
T  27328785 gagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 27328727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 4619108 - 4619277
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| ||||||||||||||||| |||||| || ||| |||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| |||| |    
T  4619108 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 4619207  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| || |||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  4619208 gaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 4619277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 8169988 - 8170153
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||| || |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||    
T  8169988 ggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaaaag 8170086  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| | ||||||| ||||||| |||||||| |||||||||    
T  8170087 gctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaag 8170153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 43334335 - 43334166
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt--ggtgtattgtacgcagcct-accctgttttt--acact 167  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||  ||||||||||||||||||| |||||||||||  ||||     
T  43334335 ggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacaca 43334237  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  43334236 ggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 43334166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 32703553 - 32703415
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  32703553 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 32703455  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
     ||||||||||| ||| |||| || ||||| |||||||||    
T  32703454 gctgtttccaggacttgaacccgtgacctttcagtcacat 32703415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 19142956 - 19143102
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttcc 180  Q
    |||||||||| |||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||  |||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttcc 19143055  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||| ||| |||||||  | ||  |||||| | |||||||||||||||    
T  19143056 aggacttgaacctgtggcattttagtcacgtgacaacaattttacca 19143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 35710442 - 35710277
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| ||| |  |||||||||||| |||||||||||||||||| |||||||| ||||||  |||||||| ||||    
T  35710442 ggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccct-attttacacaagag 35710344  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| |||| |||| ||||||| |||||||| |||||||||    
T  35710343 gctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaag 35710277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 43574731 - 43574625
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt-tacactagagactgt 176  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||| ||||| |||    
T  43574731 ccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgt 43574632  T
Q  177 ttccagg 183  Q
    |||||||    
T  43574631 ttccagg 43574625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 22600569 - 22600428
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgt-ttttacactagagactgtttccagggct 186  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||||||||||| ||||| |||||||| |||||||| | | | |||||||||| ||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggact 22600470  T
Q  187 taaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    | |||| |||||||||||||||||| | ||||| ||||||||    
T  22600469 tgaacccgtaaccttccagtcacatgataacaactttaccag 22600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 7097772 - 7097870
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgttt 178  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||| || |||||||||||||||| |||| ||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 7368527 - 7368417
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| ||||||| |||| |||||| |||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||| ||||    
T  7368527 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg-ttttacacaagag 7368429  T
Q  172 actgtttccagg 183  Q
     |||||||||||    
T  7368428 gctgtttccagg 7368417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 16957445 - 16957374
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtac 144  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  16957445 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 208937 - 209097
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgtttttacactagagactgt 176  Q
    |||||||||||||||||  |||||| ||||| || ||||||||| |||||| |||||||||||| | |||||| |||||||||||||||| ||||  |||    
T  208937 ccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgt 209036  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||| ||| ||| ||| |||||  |||||||| ||||||| |||||| |||||||||||    
T  209037 tgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc-gctgcgccaag 209097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 16880657 - 16880741
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||||||||||||||||||||| || |||||||| |||  |||||||||||||||||||||||||| ||||||||||||    
T  16880657 ccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttt 16880741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 34154818 - 34154896
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||| ||||||||||| |||| ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  34154818 ggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcct 34154896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 2838890 - 2838802
Alignment:
Q  92 gctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    |||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttc 2838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 13801771 - 13801894
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||| |||||| || ||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||||||| |    
T  13801771 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 13801870  T
Q  169 gagactgtttccagggcttaaacc 192  Q
    ||| ||| ||||||| ||| ||||    
T  13801871 gaggctgcttccaggacttgaacc 13801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 1850767 - 1850624
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagact 174  Q
    ||||||||||||||||||| |||||| ||||||| || ||||| ||| |||||||||| ||||||||||||| || ||  |||||||||||| ||||  |    
T  1850767 aatccggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggtt 1850668  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaaca 218  Q
     ||||| || ||| |||| || ||||| ||||||||| ||||||    
T  1850667 atttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 3771464 - 3771334
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||||||||||||| ||||| ||| | |||||||||||| |||||| |||||||||||| | ||||| ||||||||||||  || | ||||||||    
T  3771464 ccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttttac-acagactgtt 3771366  T
Q  178 tccagggcttaaacctgtaaccttccagtcac 209  Q
    | || | ||||||||||| ||||| |||||||    
T  3771365 tacatgacttaaacctgtgacctttcagtcac 3771334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 25622591 - 25622533
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  25622591 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 1565562 - 1565395
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactag 169  Q
    ||||| |||||||||||| |||||| |||| |||||| |||||||||||| || |||||||||| ||||||||||||| ||   ||  ||||||| | ||    
T  1565562 ggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaag 1565464  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||  |||||||||| ||| |||| |  ||||| ||||||||| ||||||| |||||||| |||||||||    
T  1565463 aggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaag 1565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 20135737 - 20135623
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||||||| ||||||| ||||| || ||| |||||||||||| |||||||  |||||||||||||||||||| |||| || ||||||||| |    
T  20135737 ggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaa 20135638  T
Q  169 gagactgtttccagg 183  Q
    ||| |||||||||||    
T  20135637 gaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 29334521 - 29334415
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt-tggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    |||||||| ||||| |||| ||||||||||| ||||||| |||| |||||||| ||||||||||||||||||| |||| || ||||||||| |||| |||    
T  29334521 ccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctg 29334422  T
Q  176 tttccag 182  Q
    |||||||    
T  29334421 tttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 30006456 - 30006290
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtt-tttacactaga 170  Q
    ||||| |||||||||||||||||||||||||  |||  |||||||||||| ||||||||| ||||| ||||| ||||| ||||||||| |||| |  |||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    |  ||||| | || ||| || || | ||||| ||||||||| ||||||| |||| ||| ||||||||    
T  30006356 ggttgttttccggacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgccaa 30006290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 22861673 - 22861837
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagaga 172  Q
    |||||| |||||||||| |||||||||||| ||||||  || |||||||| |||||||||| ||||||||  |||| ||  | || |||||||| |||||    
T  22861673 ggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtcttacttg-ttttacacaagaga 22861771  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||| ||| ||| || | || ||||| ||||||||| ||||||| |||| ||| || ||||||    
T  22861772 ctgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaag 22861837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 5873336 - 5873435
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttcca 181  Q
    ||||||||||||||||||||||||| | ||||| ||| || |||||| |||||||| |||||  |||| |||||| ||||||||| |||| |||||||||    
T  5873336 tgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgtttcca 5873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 1405318 - 1405244
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca 147  Q
    |||||||||||| |||| |||||||||||| ||||||  | |||| |||| ||||||||||||||||||||||||    
T  1405318 ggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgca 1405244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 12575670 - 12575739
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgca 147  Q
    ||||||||| |||||||| |||||||||||| || ||||||||| |||||| ||||||||||||||||||    
T  12575670 ccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 13774990 - 13774921
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag 148  Q
    ||||||||||||||||||||||||||||||| |||| ||||| | |  |||||||||||||||| |||||    
T  13774990 ccggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcag 13774921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 37024626 - 37024725
Alignment:
Q  139 ttgtacgcagcct-accctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| ||| ||||    
T  37024626 ttgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaa 37024724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgt 142  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 12477132 - 12477203
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct 151  Q
    |||||||||||||||  ||||||||||   |||||||||||| |||||| ||||||||||||||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagcct 12477203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 12006339 - 12006404
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgta 143  Q
    ||||||||||||||||||||||| |||||| | |||||||||| |||||||  |||||||||||||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgta 12006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 42924836 - 42924928
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagg--gaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||||||||||||| |||||||||||||  | | |||||||| ||||| ||  |||||||||||||||||| || ||||||||||||    
T  42924836 caatccggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttt 42924928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 22187359 - 22187250
Alignment:
Q  130 tttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||||||||||||||||||| | || | || ||||||||| |||| ||||||||||| |||||||| || ||||| |||||| || ||||||| ||||| |    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttacta 22187260  T
Q  228 gctgcgccaa 237  Q
    | ||||||||    
T  22187259 gttgcgccaa 22187250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 21784343 - 21784395
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    |||||||||||| ||||||||||||||||| |||| ||||||| |||||||||    
T  21784343 cggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 226
Target Start/End: Original strand, 28516449 - 28516593
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttcca 181  Q
    |||||||||||| |||| ||||||| | ||||| |||| |||||| |||| |||||||||||||| |||| |||| ||||||||| ||||  ||||||||    
T  28516449 cactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttcca 28516548  T
Q  182 gggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
     | ||| |||| || ||||| ||| ||| | ||||||| ||||||    
T  28516549 agacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca 129  Q
    ||||| |||||||||||||||||||||||||| |||| | |||||||||| ||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 16028628 - 16028683
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacc 128  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| |||||    
T  16028628 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 32354258 - 32354211
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggg 120  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  32354258 ggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 39301248 - 39301099
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacc-atttggtgtattgtacgcagcc-taccctgtttt-tacactagagactg 175  Q
    ||||||||||||| ||||| |||||| |||| |||||||||||| |||||  ||||||| ||| |||||| || ||||||||||| ||||| ||||  ||    
T  39301248 ccggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttg 39301150  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || ||| | ||| |||| || ||||| |||| |||| ||||||| ||||||    
T  39301149 ttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 22907913 - 22908014
Alignment:
Q  117 aggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcaca 215  Q
    |||||| |||||||||||||||||||| ||| || ||| |||||||||||| |||| |||||||  || ||| ||||  | ||||| ||||||||| |||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataaca 22908012  T
Q  216 ac 217  Q
    ||    
T  22908013 ac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 17419943 - 17419879
Alignment:
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||||||||||| ||| |||  |||||||| ||||||||| |||||||||||||||| | ||||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgccaa 17419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 23974824 - 23974756
Alignment:
Q  158 tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||||||| ||||  |||||||||| ||| |||| || ||||||||||||||| ||||||| ||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 21542489 - 21542532
Alignment:
Q  91 agctcccgcatacgcagggaccgggaaggggttccaccatttgg 134  Q
    ||||||||||||||||| | |||||||||||| |||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatttgg 21542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 24323725 - 24323820
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc-agcctaccctgt-ttttacactagagactgtttccag 182  Q
    ||||||||||||||  ||||| | |||||||||| |||| |||||| ||||| ||||| ||| |||||||| |||||||| ||||  |||||||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccag 24323820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 24360349 - 24360444
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc-agcctaccctgt-ttttacactagagactgtttccag 182  Q
    ||||||||||||||  ||||| | |||||||||| |||| |||||| ||||| ||||| ||| |||||||| |||||||| ||||  |||||||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccag 24360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 30877568 - 30877623
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacc 128  Q
    ||||| ||||||||||| ||||||| |||| |||||| |||||||||||| |||||    
T  30877568 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 39079764 - 39079827
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtac 144  Q
    |||||||||| |||||| |||| || || |||||||||||| |||||| |||||||||||||||    
T  39079764 gtgcactaaaactcccgtatacacatggtccgggaaggggtcccaccattttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 9794385 - 9794471
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtttt 161  Q
    ||||||||||||||||||| | ||||| || ||| | | |||||| | |||| ||||||||||||||| |||| | |||||||||||    
T  9794385 aatccggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 41426039 - 41425989
Alignment:
Q  113 gggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||| |||||| ||||||||||||| |||||| ||||||||||||    
T  41426039 gggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttt 41425989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 11657709 - 11657782
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct 151  Q
    |||||| ||||||| |||||| |  ||||||  ||||||||||| |||||| |||||||||||||| |||||||    
T  11657709 ccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccattttggtgtattgtatgcagcct 11657782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 29184065 - 29184098
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgca 106  Q
    ||||| ||||||||||||||||||||||||||||    
T  29184065 ggcaacccggtgcactaaagctcccgcatacgca 29184098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 10943855 - 10943914
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtat 139  Q
    |||||||||||||||||||||||  |||||| |||||||||||| ||   |||||||||||    
T  10943855 ccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtcccgttatttggtgtat 10943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 31694120 - 31694188
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc 149  Q
    ||||||||||| |||||||||||||| || | ||||||| || ||| || | ||||||||||| |||||    
T  31694120 ggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagc 31694188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 37225965 - 37226037
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtac 144  Q
    |||||||| |||||||||| |||  ||||||||| ||  ||||||||||| |||||| |||| ||||||||||    
T  37225965 ggcaatccagtgcactaaacctctggcatacgcatggttcgggaaggggtcccaccattttgttgtattgtac 37226037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 5648389 - 5648223
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| || ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  5648389 ggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 5648290  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  5648289 gctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaag 5648223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 6430630 - 6430796
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  6430630 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 6430729  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||| | ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  6430730 gctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 6430796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 30639510 - 30639344
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| || ||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  30639510 ggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 30639411  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||  ||||||| |||||||| |||||||||    
T  30639410 tctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaag 30639344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 40915959 - 40915803
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  40915959 ggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagag 40915860  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
     ||||||||||| ||| |||| || |||||  |||||||| ||||||| ||||||||    
T  40915859 gctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccag 40915803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 16408605 - 16408774
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||  ||||||||||||||||| || ||||||||||| |||| |    
T  16408605 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaa 16408704  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  16408705 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 16408774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 11054152 - 11054316
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||| ||||    
T  11054152 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg-ttttacacaagag 11054250  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||||||| |||| ||| |||| || ||||| ||||||||| ||||||| |||||||| ||||||||    
T  11054251 actgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 11054316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 20225113 - 20224948
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  20225113 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 20225015  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
      |||||||||| ||| ||||  | ||||| ||||||||| ||||||| |||||||| |||||||||    
T  20225014 gttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaag 20224948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 47528534 - 47528699
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| ||||||| ||||  ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  47528534 ggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 47528632  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||| ||| |||||    
T  47528633 gctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaag 47528699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 48598829 - 48598994
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||| ||||| ||| || |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  48598829 ggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 48598927  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  48598928 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 48598994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 21647097 - 21646928
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| | |||||||||| ||||||||  |||| ||||||||||||||| ||||| ||||| |||| |    
T  21647097 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaa 21646998  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| ||||||| ||||||||||||||| ||||||| |||||||| |||||||||    
T  21646997 gaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 21646928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 5306664 - 5306834
Alignment:
Q  73 ggcaatccggtgcactaaagctcccg----catacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacact 167  Q
    ||||| |||||||| |||||||||||    ||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||| ||||||||     
T  5306664 ggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgattttacaca 5306763  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||||| ||| |||| || ||||| ||||||||| ||| ||| |||||||| |||||||||    
T  5306764 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaag 5306834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 9832317 - 9832468
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| || ||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  9832317 ggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 9832415  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaatttta 224  Q
     |||||| |||| ||| |||| || ||||| |||||| |||||||||||||||    
T  9832416 gctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 20639662 - 20639775
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactag 169  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||| ||    
T  20639662 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaag 20639761  T
Q  170 agactgtttccagg 183  Q
    || |||||||||||    
T  20639762 aggctgtttccagg 20639775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 7909284 - 7909396
Alignment:
Q  73 ggcaatccggtgcactaaagctccc-gcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactaga 170  Q
    ||||| ||| ||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||| || |||||||||||||||| |||    
T  7909284 ggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaaga 7909383  T
Q  171 gactgtttccagg 183  Q
    |||||||||||||    
T  7909384 gactgtttccagg 7909396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 16911695 - 16911526
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||  |||||||||||||| ||||||||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| ||| ||||| |    
T  16911695 ggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaa 16911596  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||| ||| ||| |||| || |||||  |||||||| ||||||| |||||||| |||||||||    
T  16911595 gaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaag 16911526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 29207902 - 29208039
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  29207902 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 29208000  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcaca 210  Q
     |  |||||||| ||| |||| || ||||| ||||||||    
T  29208001 gcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 17043413 - 17043546
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgt-ttttacactagagactgtttccagggc 185  Q
    ||||||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||| |    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggac 17043512  T
Q  186 ttaaacctgtaaccttccagtcacatcacaacaa 219  Q
    || ||||||| ||||| ||||||| | |||||||    
T  17043513 ttgaacctgtgacctttcagtcacttgacaacaa 17043546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 8473624 - 8473790
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggacc--gggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactag 169  Q
    ||||| |||||||||||||||||||||||| ||||||  |  |||||||||| |||||||||||||||||||| |||||| ||||||| ||  |||| ||    
T  8473624 ggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctg-ttaaacacaag 8473722  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    || ||||||||||| ||| |||| | |||||||| |||| || ||||||| |||||||| ||||||||    
T  8473723 aggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 44363134 - 44363293
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag-cctaccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||||  |||||||||| ||||||||| |||||||||      
T  44363134 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacac 44363233  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    ||| |||||| |||| ||| |||  || ||||| ||||||||| ||||||| ||||||||    
T  44363234 gaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccag 44363293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 25629180 - 25629069
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactaga 170  Q
    ||||| |||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||| ||||| ||||||  ||||||||| |||    
T  25629180 ggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaaga 25629081  T
Q  171 gactgtttccag 182  Q
    ||||||||||||    
T  25629080 gactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 55766476 - 55766637
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||||||||||| |||||||||| || |||||| ||||||||||||||  ||||||||||||||||| ||||||||||  |||| ||| ||||||    
T  55766476 ccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttacacacaagaaactgtt 55766575  T
Q  178 tccagggctt-aaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||   ||| || || || ||||||| ||||||| ||||||| |||||||| |||| ||||    
T  55766576 tccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaag 55766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 54175190 - 54175046
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggacc-gggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgtttttacactagagactg 175  Q
    |||||||||||||||||||||||| |||||| || |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||| |||    
T  54175190 ccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 54175091  T
Q  176 -tttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
     |||||||| ||| || | || || || ||||||||| |||||||    
T  54175090 ttttccaggacttgaatccgtgacatttcagtcacatgacaacaa 54175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 23501920 - 23501757
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||  ||||||||||||||||| || ||||||| ||||||||| |    
T  23501920 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaa 23501821  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||      | ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  23501820 gaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 23501757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 51865042 - 51865149
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||| || ||||||||| |||    
T  51865042 ggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaaga 51865141  T
Q  171 gactgttt 178  Q
    | ||||||    
T  51865142 ggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 30690188 - 30690270
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||| ||||||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttt 30690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 224
Target Start/End: Original strand, 32478802 - 32478942
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||     ||||| |||||||||||||||||||||  ||||    
T  32478802 ccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgtttttacactagaggttgtt 32478895  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaatttta 224  Q
    |||||| ||| ||||||| ||||  | ||||||| ||||||| ||||    
T  32478896 tccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 47444088 - 47443958
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| || ||||||| ||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| | |||    
T  47444088 ggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaaga 47443989  T
Q  171 gactgtttccagggcttaaacctgtaacctt 201  Q
    | ||||||||||| ||| |||| || |||||    
T  47443988 ggctgtttccaggacttgaacccgtgacctt 47443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 35567295 - 35567146
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||| |||||| ||||| ||||||| ||||||||| || | ||||    
T  35567295 ccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgt 35567196  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||| | ||| ||||  | ||||| |||| |||| ||||||| ||||||    
T  35567195 ttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 37494972 - 37494815
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttcc 180  Q
    |||||||||||||| |||||||||||| || | ||||||| |||||||||||| ||||||| ||| || ||||||| ||||||||| ||||  |||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||| ||||||| ||||| ||||| |||  |||||| |||||||| ||| |||||    
T  37494872 aggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaag 37494815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 49796911 - 49796818
Alignment:
Q  90 aagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccag 182  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||| |||| ||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 19027974 - 19027831
Alignment:
Q  78 tccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    |||||||||||||||||||| ||||||||| | | || ||||||| |||||| |||||||||||||||||||| ||||||| ||||||||| |||   ||    
T  19027974 tccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttg 19027875  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
    |||||||| ||| |||| || ||||| ||||||| | |||||||    
T  19027874 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 19027831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 47441534 - 47441689
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    |||| ||||||| || |||||||| || ||| ||||| |||||||||||| | ||||||||||||||||||| ||||| ||||||| ||||||||  |||    
T  47441534 ggcagtccggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaaga 47441633  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||||||  || ||| ||||||| ||||| ||||||| | ||||||| ||||||    
T  47441634 gactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 55830733 - 55830892
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||| |||||||||| || |||||| ||||||||||||||  ||||||||||||||||  ||||||||||  |||| ||||||||||||    
T  55830733 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgtttacacacaagagactgtttc 55830832  T
Q  180 cagggcttaaac-ctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||   ||| ||| | || |||||||  |||||| ||||||| |||||||| |||| ||||    
T  55830833 caaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaag 55830892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 13256403 - 13256568
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||| | || |||  ||||||||||| |||| |||  |||||||||||||||||||| ||||||||||| |||| |    
T  13256403 ggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaa 13256502  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||    ||||| ||| ||||| | ||||||||||||||| ||||||| |||||||| ||| |||||    
T  13256503 gaggct----ccaggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaag 13256568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 14983953 - 14983808
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtttccag 182  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||| || ||||||  ||||||||| |||| ||||||| |     
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaa 14983854  T
Q  183 ggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    | ||| || | || |||||||| ||| || ||||||| ||||||||    
T  14983853 gacttgaatccgtgaccttccaatcatatgacaacaactttaccag 14983808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 54730376 - 54730225
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccc--tgtttttacactagagact 174  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||| ||||||||| || ||  | ||||||||| |||| ||    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggct 54730277  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||| ||| ||| |||| || |||||   ||||||| ||||||| ||||||    
T  54730276 gtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 39077800 - 39077946
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||| |||  ||  ||||||||||| ||||||||||| || ||||||| |||||||| ||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctg-ttttacacaagag 39077898  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
     ||||||||||| ||| |||| || ||||| || |||||| |||||||    
T  39077899 gctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaa 39077946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 10277761 - 10277839
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||| ||||| | |||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||    
T  10277761 ggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagcct 10277839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 20908649 - 20908719
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagcct 20908719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 49938611 - 49938742
Alignment:
Q  87 ctaaagctcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgcagcctaccctgtttttacactagagactgtttccagggc 185  Q
    |||||||||||||||| ||||||   |||||||||| ||||||||| |||||||||||| |  | ||||| |||||||||| |||| ||||||||||| |    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac--cttaccccgtttttacacaagaggctgtttccaggac 49938708  T
Q  186 ttaaacctgtaaccttccagtcacatcacaacaa 219  Q
    || ||||||| ||||| ||||||| | |||||||    
T  49938709 ttgaacctgtgacctttcagtcacgtgacaacaa 49938742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 219
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  92 gctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtttccagggcttaa 189  Q
    |||||||||||| ||||| ||||||| |||| |||||||||||||||||| || || || ||||||  |||||||||  ||| ||||||||||||||| |    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  190 acctgtaaccttccagtcacatcacaacaa 219  Q
    ||| || ||||| ||||||||| |||||||    
T  7385599 acccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 20225207 - 20225127
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcct 151  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||| |||||||  |||||||||||||||||||||    
T  20225207 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct 20225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 25463237 - 25463108
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggct 186  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||| || | ||| | ||||||||| ||||  |||||||||| ||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggact 25463138  T
Q  187 taaacctgtaaccttccagtcacatcacaa 216  Q
    | |||| || ||||| ||||||||| ||||    
T  25463137 tgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 238
Target Start/End: Original strand, 30352591 - 30352762
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag-----cctaccctg------tttttacac 166  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||  |||||||||||||||||||     | |||||||      |||||||||    
T  30352591 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacac 30352690  T
Q  167 tagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     |||| ||||||||||| ||  |||| || ||||| | ||||| | ||||||| |||||||| |||||||||    
T  30352691 aagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaag 30352762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 238
Target Start/End: Complemental strand, 10660521 - 10660368
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtttccagg 183  Q
    ||||||||||||||||||| || |  |||||||||  ||||||  ||||||||||||| |||||| ||||||  ||||||||  ||||  ||||||||||    
T  10660521 taaagctcccgcatacgca-ggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10660423  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| ||| ||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  10660422 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaag 10660368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 238
Target Start/End: Complemental strand, 10874666 - 10874513
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtttccagg 183  Q
    ||||||||||||||||||| || |  |||||||||  ||||||  ||||||||||||| |||||| ||||||  ||||||||  ||||  ||||||||||    
T  10874666 taaagctcccgcatacgca-ggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10874568  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| ||| ||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  10874567 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaag 10874513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 38786740 - 38786673
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtatt 140  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  38786740 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 238
Target Start/End: Original strand, 30496333 - 30496491
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagagactgtttc 179  Q
    |||||||||||||||||  |||| ||| || ||||||||| || || ||||||||||||||||| |||||||  || || ||||||| |||| |||||||    
T  30496333 cggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttc 30496432  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || | ||| |||  || ||||| ||||||| | ||||||| |||  ||| |||||||||    
T  30496433 catgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 38755912 - 38755970
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  38755912 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 39029078 - 39029220
Alignment:
Q  87 ctaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagg 183  Q
    |||||||||||||||| |||||| |||| ||| ||| |||||| ||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||||| |    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaag 39029177  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||| ||||| | |||||  |||||||  ||||||| ||||||    
T  39029178 gcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 41018807 - 41018945
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttcc 180  Q
    |||||||||||| ||  |||||||| || | |||||||||| |||| ||||||||||||||||| |||| ||||||  |||||||| ||||  |||||||    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttcc 41018906  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
    ||| ||| |||| || ||||| ||||||| | |||||||    
T  41018907 aggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 33836491 - 33836563
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgta 143  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  33836491 ggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 11394983 - 11394923
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttg 133  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  11394983 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 11404710 - 11404650
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttg 133  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  11404710 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 9987844 - 9987950
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtt-tttacactagagactgt 176  Q
    |||||||| ||||||||||||||| ||| || |  ||||||||| |||||||||||||||||||| |||||| |||||| || ||||||| ||||  |||    
T  9987844 ccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgt 9987943  T
Q  177 ttccagg 183  Q
    |||||||    
T  9987944 ttccagg 9987950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 32484364 - 32484307
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat 130  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  32484364 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 40553941 - 40553990
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  40553941 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggt 40553990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 54967144 - 54966997
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    ||||||||| |||||||||||||| | ||||  ||||||||||| |||||||||||| ||||||| ||| || ||||||| ||||||||| ||||  | |    
T  54967144 ccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttct 54967047  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||||  ||| ||| ||| ||||| ||||||||| ||||||| ||||||    
T  54967046 ttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 20405210 - 20405057
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgc-agcctaccctg--tttttacactagagactgtt 177  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||||  || ||||||||||||| | | |||||||  ||||||||| |||| |||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || |||       || || ||||||||||||||| ||||||| |||||||| |||| ||||    
T  20405110 tctagg-------cccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaag 20405057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 21489210 - 21489106
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcag-cctaccctg-tttttacactagagactgttt 178  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||| ||||||| ||||||||||| | ||| ||| ||||||| | |||| ||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgttt 21489111  T
Q  179 ccagg 183  Q
    |||||    
T  21489110 ccagg 21489106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 50555666 - 50555718
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  50555666 ccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  130 tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||  ||| ||||||| ||||  ||||||| | ||||||| |||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 36816388 - 36816479
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacc-atttggtgtattgtacgcag-cctaccctgttttt 162  Q
    ||||| ||||| ||||||||||||||||||| ||||| || |||||| || |||||  ||||||||||||||||||| ||| ||||||||||    
T  36816388 ggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcagccctgccctgttttt 36816479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 25388307 - 25388249
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||| |||||||||||||||||  |||||||||||| |||||||||||| ||||||||    
T  25388307 ggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 35532123 - 35532077
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaagg 119  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  35532123 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 47482864 - 47482913
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 30581481 - 30581560
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||||||||||  |||| |||||| |||||||||||| |||||| ||||||||||||||| || || ||||||||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgttttt 30581560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 42164232 - 42164307
Alignment:
Q  151 taccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||||||||||||| ||||  |||||||| | ||| |||| || ||||| ||||||||| ||||||||||||||    
T  42164232 taccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 37038135 - 37038180
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttcca 126  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||    
T  37038135 ggtgcactaaagctcccgcatacgcagggtacgggaagaggttcca 37038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 44718698 - 44718641
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat 130  Q
    ||||| ||||||  ||||||||||||||||||||||| | |||||||||| |||||||    
T  44718698 ggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 2813259 - 2813181
Alignment:
Q  73 ggcaatccggtgcact-aaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcag 148  Q
    |||||||||||||||| ||||||||||||||||||  |  |||||| |||| |||||||  ||| ||||||||||||||    
T  2813259 ggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcag 2813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 12711461 - 12711528
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag 148  Q
    |||||||||||| | ||||||||||  || | | |||||||| || ||||||||||||||||||||||    
T  12711461 ggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcag 12711528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 3580860 - 3580922
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||| |||| |||||| |||||||||||| | | |||||||||||||| || ||||||    
T  3580860 aaagctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagcct 3580922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 16494344 - 16494259
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt--ggtgtattgtacgcagc-ctaccctgtttt 161  Q
    ||||| |||||||||| |||||||| ||||| | ||||| |||| |||||||||  ||||||||||| |||||  |||||||||||    
T  16494344 ccggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 28494276 - 28494222
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttg 133  Q
    ||||||||||| |||||||||||| |||||  | |||||||||| ||||||||||    
T  28494276 ccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatttg 28494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 217
Target Start/End: Original strand, 32629285 - 32629418
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccacc-atttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccag 182  Q
    ||||||| ||||| |||||||| || |||||||||||| || || |||||||||| |||| || ||| ||||||||||||  || |||| ||||||| ||    
T  32629285 cactaaaactcccacatacgcaaggtccgggaaggggtcccgccaatttggtgta-tgtaggcggccttaccctgtttttttacaagaggctgtttcgag 32629383  T
Q  183 ggcttaaacctgtaaccttccagtcacatcacaac 217  Q
    |  || |||| || ||||| ||||||||| |||||    
T  32629384 gatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 7038183 - 7038044
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgcag-cctaccct-gtttttacactag 169  Q
    ||||| || ||||||||||||||| | |||||||||| ||||| ||| |  ||||||||| ||||||||||||| || | ||||||  ||||||||| ||    
T  7038183 ggcaacccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttacacaag 7038085  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    |  |||||| |||| ||| ||||||| ||||| |||||||||    
T  7038084 aagctgttt-caggacttgaacctgtgacctttcagtcacat 7038044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 19425956 - 19425923
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgca 106  Q
    |||||||||||| |||||||||||||||||||||    
T  19425956 ggcaatccggtgtactaaagctcccgcatacgca 19425923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 48033457 - 48033424
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgca 106  Q
    ||||||| ||||||||||||||||||||||||||    
T  48033457 ggcaatcaggtgcactaaagctcccgcatacgca 48033424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 8820629 - 8820581
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||||||| ||| ||||||||||||| | |||||||||| ||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 26869859 - 26869696
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||| |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  26869859 ggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaccagag 26869760  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgcc 235  Q
     ||||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||| ||||||    
T  26869759 gctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 40272816 - 40272983
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  40272816 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaga 40272915  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |  |||||||||| ||| ||||  | ||||||||||||||| ||||||| |||||||| |||||||||    
T  40272916 ggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaag 40272983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 22609918 - 22609764
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  22609918 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 22609819  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
     ||||||||| | ||| |||| || ||||| ||||||||| ||||||| ||||||    
T  22609818 gctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 13628794 - 13628964
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctgttt-ttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| |||||||||| |||||| |    
T  13628794 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaa 13628893  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa-ttttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||||||| || ||||||    
T  13628894 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaag 13628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 13730606 - 13730775
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||| ||||||||  ||||||||||||| |||||| ||||||||||| |||| |    
T  13730606 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaa 13730705  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  13730706 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 13730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 22122921 - 22123086
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| ||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  22122921 ggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 22123019  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||||| ||| |||| |  ||||| ||||||||| ||||||| ||||||||  ||||||||    
T  22123020 actgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaag 22123086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 46421038 - 46421208
Alignment:
Q  73 ggcaatccggtgcact-aaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acact 167  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| ||||     
T  46421038 ggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 46421137  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||||| ||| |||| || |||||  |||||||| ||||||| |||||||| |||||||||    
T  46421138 agaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaag 46421208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 1217241 - 1217076
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||| ||||||| |||||||| ||||    
T  1217241 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 1217143  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| |||| |||| || |||| |||||||| |||||||||    
T  1217142 gctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaag 1217076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 39203667 - 39203502
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||    
T  39203667 ggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttacacaagag 39203569  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||| ||| ||| ||||||| ||||| ||||||||| ||||||| ||||| || || ||||||    
T  39203568 gctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaag 39203502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 52926223 - 52926381
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagaga 172  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||       ||  ||||| ||||     
T  52926223 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagcc-------ttactacacaagagg 52926315  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  52926316 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 52926381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 16735593 - 16735427
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| || ||||||| ||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||| ||||||||||||  || ||||    
T  16735593 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctacaagag 16735494  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||| ||| ||| |||| || || || ||||||||| ||||||| |||||||| |||||||||    
T  16735493 gctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaag 16735427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 8247706 - 8247860
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acactagagactgtttccagg 183  Q
    |||||||||||||||||||||| ||||||||| || ||||||||  |||||||||||||||| ||| ||||||||||| |||| |||| |||||||||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  184 gcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  8247806 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 8247860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 12914039 - 12914206
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| |||||||| | ||||||||||||| |||||| | ||||||||||  |||||||||||||||||||||| ||| ||||||| ||||||||| |||    
T  12914039 ggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaaga 12914138  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| ||| ||| ||||| | ||||||| ||||||| |||||||| |||||||||    
T  12914139 ggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaag 12914206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 29366724 - 29366893
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| || |||||||||||||||| ||||||||||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| |||||| || |    
T  29366724 ggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaa 29366823  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || |||||  |||||||| ||||||| |||||||| | |||||||    
T  29366824 gaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaag 29366893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 54484844 - 54484731
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactag 169  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||  ||||||||| ||    
T  54484844 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaag 54484745  T
Q  170 agactgtttccagg 183  Q
    || |||||||||||    
T  54484744 aggctgtttccagg 54484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 238
Target Start/End: Original strand, 6411833 - 6411992
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgttt 178  Q
    ||||||||||||||||||||||||||| || | |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 6411932  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     || | ||| ||||  | ||||  |||| |||| ||||||| |||||||| |||| ||||    
T  6411933 acaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaag 6411992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 26573272 - 26573125
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgttt 178  Q
    ||||||||||||||| ||||||||||||| |||||| ||||| |||||| |||||||||||||||||||| ||||||| |||||||||  ||| ||||||    
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgttt 26573173  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||| ||| |||| || ||||| ||||||| | ||||||| ||||||    
T  26573172 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 7696902 - 7697056
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtt 177  Q
    ||||||||||| ||||||| |||| |||| | |||||||||||     ||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  7696902 ccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtt 7696995  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||| ||| |||| || |||||  |||||||| ||||||| |||||||| |||||||||    
T  7696996 tccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaag 7697056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 25517174 - 25517344
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactag 169  Q
    ||||| |||||||||||||||||| |||||||||||  |||||||||||| ||||||||| ||||||||||||||||| || | ||  ||||||||| ||    
T  25517174 ggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaag 25517273  T
Q  170 agactgtttccagg--gcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||  ||||||||||   | | | ||||| ||||||||||||||| ||||||| |||||||| |||||||||    
T  25517274 aggatgtttccaggtcccatcatcctgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 25517344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 31593000 - 31592881
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  31593000 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 31592902  T
Q  172 actgtttccagggcttaaacc 192  Q
     ||||||||||| ||| ||||    
T  31592901 gctgtttccaggacttgaacc 31592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 34420656 - 34420802
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgttt 178  Q
    |||||||||||||||| |||||||| || |||||||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||| |||| ||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    ||||| ||| |||| || ||||| ||||||| | ||||||| |||||    
T  34420756 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 34771374 - 34771457
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt 161  Q
    ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34771374 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 516565 - 516417
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca---tttggtgtattgtacgcagcc-taccctg-tttttacact 167  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||| || |||   |||||| |||||| ||||||| ||||||| |||||||||     
T  516565 ggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacaca 516466  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaa 216  Q
    |||| ||||||||||| ||| |||| || ||||| ||||||||| ||||    
T  516465 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 5173723 - 5173892
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgtttttacactag 169  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||  ||||||  |||||||||||| | ||| || |||  ||||||||||| ||    
T  5173723 ggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttttacacaag 5173822  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa-ttttaccagctgcgccaag 238  Q
    ||  |||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||| || |||||||||    
T  5173823 aggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaag 5173892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 15797373 - 15797284
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt 161  Q
    ||||| ||||||||||| ||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  15797373 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 10795435 - 10795550
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgt-ttttacactagagactgt 176  Q
    |||||||| |||||||||||||||||||| || ||||||||| ||||||  ||||||||||||||||||||| |||||||| |||||||| |||| ||||    
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 10795534  T
Q  177 ttccagggcttaaacc 192  Q
    ||||||| ||| ||||    
T  10795535 ttccaggacttgaacc 10795550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 14987106 - 14986989
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacactagagact 174  Q
    |||||||||||||||||||||||| ||| || ||||||| |||| |||||||  |||||||||||||||||||| ||||||| ||||||||| |||| ||    
T  14987106 ccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 14987007  T
Q  175 gtttccagggcttaaacc 192  Q
    ||||||||| ||| ||||    
T  14987006 gtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 45786218 - 45786327
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||||||||||||||| |||| ||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||||||| ||||||||| |    
T  45786218 ggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 45786317  T
Q  169 gagactgttt 178  Q
    ||| ||||||    
T  45786318 gaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 45948848 - 45948954
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgt 176  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||| |||||| ||||||  ||||||||| ||||  |||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  177 ttccagg 183  Q
    |||||||    
T  45948948 ttccagg 45948954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 353353 - 353445
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||| |||||||  |||||||||||||||||||| ||||||||||||    
T  353353 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 353445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 49013477 - 49013589
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||||||||| || || ||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||||||| |    
T  49013477 ggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 49013576  T
Q  169 gagactgtttcca 181  Q
    ||| |||||||||    
T  49013577 gaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 7943143 - 7942995
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactaga 170  Q
    ||||| || ||||||||||||||||||||||||| || | || ||||| | |||||||||| |||||||||||||| | ||||||| |||||| || |||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaaga 7943044  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
      ||||||||||| ||| || | || ||||||||||||||| |||||||    
T  7943043 tgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 7942995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 33926224 - 33926096
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatt-tggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccag 182  Q
    ||||||||||| |||||| |||||| || ||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||| || |||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccag 33926125  T
Q  183 ggcttaaacctgtaaccttccagtcacat 211  Q
    | ||| ||||  | ||||| |||||||||    
T  33926124 gacttgaacccatgacctttcagtcacat 33926096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 47624167 - 47624088
Alignment:
Q  100 atacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgttt 178  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 54374357 - 54374488
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtt 177  Q
    |||| ||||||||||||||||| |||||| |||||||||||| |||||| ||||||| ||||||||||||| ||||||  ||||||||| ||||  ||||    
T  54374357 ggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtt 54374456  T
Q  178 tccagggcttaaacctgtaaccttccagtcac 209  Q
    |||| | ||| ||||||| ||||| |||||||    
T  54374457 tccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 4495680 - 4495831
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||||||||||||||||| ||            |||||||||||||||||||||||||| ||||||| ||||||||| | |    
T  4495680 ggcaacccggtgcactaaagctcccgcatacgcagggtcc------------caccatttggtgtattgtacgcagccttaccctgttttttacacaata 4495767  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
    | || ||| |||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||    
T  4495768 ggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgc 4495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 53996575 - 53996725
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    ||||||||||||||||||| ||||||||| | | |||||||||| |||||| |||||||||||||| |||||| ||||||| ||||||||| ||||  ||    
T  53996575 ccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttg 53996674  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||| | ||| |||  || ||||| |||||| || ||||||| ||||||    
T  53996675 tttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 9607345 - 9607189
Alignment:
Q  86 actaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acactagagactgtttcca 181  Q
    ||||||||||||||||| || ||| | |||||||||| ||| ||||  ||||||||| |||||||||| ||||||||||| || | |||| |||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  182 gggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || ||| ||||  | ||||| ||||||||| ||||||| ||||| || |||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaag 9607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 10870025 - 10870122
Alignment:
Q  142 tacgcagcct-accctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||| ||||||||||||||| |||| ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 10870122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 9276401 - 9276327
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggt-ccaccatttggtgtattgtacgcagccttaccctgttttt 9276327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 829452 - 829521
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgca 147  Q
    |||||||||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 25944615 - 25944468
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtt 177  Q
    ||||| ||||||||||| ||||||||||| | |||||||||| |||||| ||||||||||||||| ||||| | ||| | ||||||||| |||| | |||    
T  25944615 ggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtt 25944516  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    |||||| ||| ||||  | ||||| ||||||| | ||||||| |||||    
T  25944515 tccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 24851305 - 24851367
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggt 135  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||||| ||||||||||||    
T  24851305 ggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 30928167 - 30928296
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggct 186  Q
    ||||||||| |||| |||||| |||||||||||| || ||| |||||||||| ||| || || |||| || ||||||||| |||| ||||||||||| ||    
T  30928167 aaagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggact 30928266  T
Q  187 taaacctgtaaccttccagtcacatcacaa 216  Q
    | |||| || ||||| ||||||||| ||||    
T  30928267 tgaacccgtgacctttcagtcacatgacaa 30928296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 43114872 - 43114986
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgca-gggaccgggaaggggttccaccatttggtgtattgtacgcagcc--taccctg--tttttacact 167  Q
    ||||||||  |||||||||||||||||||||||| ||| || |||| |||| |||||||||||||||||||| | ||||  |||||||  |||||||||     
T  43114872 ggcaatccaatgcactaaagctcccgcatacgcaggggtccaggaa-gggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacaca 43114970  T
Q  168 agagactgtttccagg 183  Q
    |||| |||||||||||    
T  43114971 agaggctgtttccagg 43114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 54032575 - 54032703
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt-acactaga 170  Q
    ||||| ||||||||||||||||||||||||||||||| ||            ||||||| ||||||||||| ||||||| ||||||||||| |||| |||    
T  54032575 ggcaacccggtgcactaaagctcccgcatacgcagggtcc------------caccattcggtgtattgtatgcagccttaccctgttttttacacaaga 54032662  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    |  |||||||||| ||| |||| || |||||||||||||||    
T  54032663 ggttgtttccaggacttgaacccgtgaccttccagtcacat 54032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 45620883 - 45620988
Alignment:
Q  124 ccaccatttggtgtattgtacgcagcc-taccctg--tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaat 220  Q
    |||||| |||||||||||||||||||| |||||||  ||||||||| |||| ||||||||||  ||| |||| || ||||| ||||||| | |||||||     
T  45620883 ccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaac 45620982  T
Q  221 tttacc 226  Q
    ||||||    
T  45620983 tttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 52428480 - 52428592
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtt-------ccaccatttggtgtattgtacgcagcc-taccctgt-ttttacactag 169  Q
    ||||||||||||||||||| |||||| |||| ||| |||||||||       |||| |||||||||||||||||||||| |||||||| |||||||| ||    
T  52428480 ccggtgcactaaagctcccacatacgtagggtccgagaaggggtttggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaag 52428579  T
Q  170 agactgtttccag 182  Q
    || ||| ||||||    
T  52428580 aggctgcttccag 52428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 10484620 - 10484669
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  10484620 ggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggt 10484669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 201
Target Start/End: Original strand, 44403565 - 44403690
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggt-gtattgtacgcagcc-taccctgt-ttttacactagagactg 175  Q
    |||||||||||||||| | ||||||| |||| |||||||||||| ||||||||| || ||||| | ||||||| |||| ||| |||||||| |||| ||     
T  44403565 ccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggcta 44403664  T
Q  176 tttccagggcttaaacctgtaacctt 201  Q
    || ||||| ||| ||||||| |||||    
T  44403665 ttcccaggactttaacctgtgacctt 44403690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 30452948 - 30452892
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca 129  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||    
T  30452948 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 47624252 - 47624208
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaa 117  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||    
T  47624252 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 11461732 - 11461807
Alignment:
Q  158 tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcg 233  Q
    ||||||||| | ||||| |||||||  ||||||||||||||||||| |||| || ||||||| |||||||| ||||    
T  11461732 tttttacacaaaagactatttccagaacttaaacctgtaaccttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 24577988 - 24577917
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtac 144  Q
    ||||||||||||||||| |||||||| ||| |||||| | ||||| || | ||||||||| |||||||||||    
T  24577988 ggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 31904868 - 31904951
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttcc-accatttggtgtattgtacgcag-cctaccctgttttt 162  Q
    |||||||||||||||||||| ||| | |  | ||||||||| ||| ||||||||||||||||||||||| | ||||||||||||    
T  31904868 ggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttt 31904951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 50624963 - 50625030
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    ||||||||||||||||||| | ||||||||| || |||||| || ||||||  |||||||||||||||    
T  50624963 ccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgc 50625030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 19731149 - 19731043
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    |||||||||||||||||| |||||| ||| | | ||||| |||| |||||| | ||||||||||||||| || |||| || ||||||||| |||| || |    
T  19731149 ccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctat 19731050  T
Q  177 ttccagg 183  Q
    |||||||    
T  19731049 ttccagg 19731043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 45139488 - 45139622
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt--ggtgtattgtacgcagcc-taccctgt-ttttacactagagact 174  Q
    ||||||||| |||| |||||||||||||||  | |||||||||| |||||||||  ||||||||||| |||||| |||||||| |||||||| ||||  |    
T  45139488 ccggtgcac-aaagttcccgcatacgcaggt-ctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggtt 45139585  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    |||||||   ||| |||| || ||||| |||||||||    
T  45139586 gtttccaaaacttgaacccgtgacctttcagtcacat 45139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 40390394 - 40390358
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcaggg 109  Q
    ||||| |||||||||||||||||||||||||||||||    
T  40390394 ggcaacccggtgcactaaagctcccgcatacgcaggg 40390358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 55401324 - 55401208
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcag-cctaccctg-tttttacactagagactg 175  Q
    ||||||||  |||||||||||||||| | || ||| |||||||| |||||| ||||||||||| ||||||| | || |||| ||||||||| |||| |||    
T  55401324 ccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctg 55401225  T
Q  176 tttccagggcttaaacc 192  Q
    ||| |||| ||| ||||    
T  55401224 tttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 26292477 - 26292410
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    ||||||||||| || ||||||||| ||||||  ||||||||| | ||| |||||||||||| ||||||    
T  26292477 ccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgc 26292410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 46169981 - 46170038
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtatt 140  Q
    |||||| |||||||| |||| |||||| |||||||||||| | |||||||||| ||||    
T  46169981 tgcactgaagctcccacatatgcagggtccgggaaggggtcctaccatttggtttatt 46170038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 14266376 - 14266412
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcaggg 109  Q
    ||||| || ||||||||||||||||||||||||||||    
T  14266376 ggcaacccagtgcactaaagctcccgcatacgcaggg 14266412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 2541029 - 2541191
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||| |||| ||||    
T  2541029 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgt 2541128  T
Q  177 ttccagggcttaaacctgtaacc-ttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||| ||| |||| || ||| |||||||||||| ||||||| |||||||| |||||||||    
T  2541129 ttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaag 2541191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 32758390 - 32758225
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||| ||||    
T  32758390 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg-ttttacacaagag 32758292  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||| |||||||||    
T  32758291 gctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 32758225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 21172013 - 21172178
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  21172013 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 21172111  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| |||| |||| ||||||| |||||||| |||||||||    
T  21172112 gctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaag 21172178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 42798800 - 42798633
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||| ||||||| |||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||| |||| || ||||||||| |||    
T  42798800 ggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaaga 42798701  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||| | ||| |||| || ||||||||||||||| ||||||| |||||||| |||||||||    
T  42798700 gactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 42798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 11617592 - 11617756
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactaga 170  Q
    ||||| |||||||||||||| ||| |||||||||||| || ||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||| |||    
T  11617592 ggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 11617691  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgcc 235  Q
    |  |||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||| ||||||    
T  11617692 ggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 238
Target Start/End: Complemental strand, 40464000 - 40463841
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgttt 178  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||    
T  40464000 cggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgttt 40463901  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | | | ||| |||| || ||||| ||||||||| ||||||| |||||| | |||||||||    
T  40463900 ctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaag 40463841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 10693077 - 10693242
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| || |||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||| ||||    
T  10693077 ggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-cttttacacaagag 10693175  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||| || |||||||||    
T  10693176 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaag 10693242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 35334826 - 35334985
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgt 176  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||||||| ||| | ||||||| |||||||||  ||||||||    
T  35334826 ccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac--gagactgt 35334923  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||| ||| |||  || ||||||||||||||| ||||||| |||||||| |||||||||    
T  35334924 ttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaag 35334985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 42805657 - 42805488
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||| ||||||||  ||||||||||||| |||||| ||||||||||| |||| |    
T  42805657 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaa 42805558  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| | |||||||    
T  42805557 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaag 42805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 42391104 - 42391250
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||     
T  42391104 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaa 42391202  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
     ||||||||||| ||| |||| || ||||| ||||||||| |||||||    
T  42391203 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 42391250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 48735126 - 48735292
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||| || |||||||| ||||    
T  48735126 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtg-ttttacacaagag 48735224  T
Q  172 actgtttcc-agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
      ||||||| ||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  48735225 gttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 48735292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 34626212 - 34626374
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||| || |||||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||  |||    
T  34626212 ggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttacacaggag 34626311  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
     ||||||||||| ||| || ||||  |||| || |||||| ||||||| |||||||| |||||    
T  34626312 gctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgc 34626374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 228
Target Start/End: Original strand, 33871922 - 33872070
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||| ||||||| ||||| | |||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||  ||||||    
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttc 33872021  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |||| ||| |||| |  ||||| ||||||||| ||||||| ||||||||    
T  33872022 caggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 27629765 - 27629598
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| |||||||||| ||||| ||||||| |||||| |||||||||||| ||||||||||||||||| |||||| || ||||||| ||||||||| |||    
T  27629765 ggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaaga 27629666  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| |||| || ||||| | |||| || ||||||| |||||||| |||||||||    
T  27629665 ggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaag 27629598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 7879769 - 7879639
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| || ||||||||| |||    
T  7879769 ggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaaga 7879670  T
Q  171 gactgtttccagggcttaaacctgtaacctt 201  Q
    || |||||||||| ||| |||| || |||||    
T  7879669 gattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 47716592 - 47716423
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||| |||||||||||||| || ||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||||||| |    
T  47716592 ggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 47716493  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || |||||||||||||||  |||||| ||| |||| || ||||||    
T  47716492 gaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaag 47716423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 38604652 - 38604546
Alignment:
Q  79 ccggtgcact-aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgt 176  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  38604652 ccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgt 38604553  T
Q  177 ttccagg 183  Q
    |||||||    
T  38604552 ttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 47077859 - 47078024
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagag 171  Q
    ||||||||||||||||| |||||||||||| | ||||   |||||||||| ||||||||| |||||||||||||| | | || || |||| |||| ||||    
T  47077859 ggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctatttt-acacaagag 47077957  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  47077958 actgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 47078024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 38262200 - 38262340
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccct-gtttttacactaga 170  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||| ||| |||||||||||||||| ||| |  |||| |  ||||||||| |||    
T  38262200 ggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaaga 38262299  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    ||||||||||||| ||| |||| || |||||||||||||||    
T  38262300 gactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 43557606 - 43557436
Alignment:
Q  73 ggcaatccggtgcactaaa-gctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acact 167  Q
    ||||| ||||||||||||| |||||||||||||||| | |||||| ||||| ||||||||  |||||||||||||||||||| || |||||||| ||||     
T  43557606 ggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacaca 43557507  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||||| ||| ||||  | ||||| ||||||||| ||||||| |||||||| |||| ||||    
T  43557506 agaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaag 43557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 19426894 - 19427059
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt-acactaga 170  Q
    ||||| |||||||||| |||||| |||||| |||||| ||| |||||| | ||||||||||||||||||||||||| || ||||| ||||| |||| |||    
T  19426894 ggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctattttttacacaaga 19426992  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    | ||||||||||| ||| |||| || ||||| | ||||||| ||||||| |||||||| ||||||||    
T  19426993 ggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 18512457 - 18512586
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| || |||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||| ||||||||| |||     
T  18512457 ggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagat 18512556  T
Q  172 actgtttccagggcttaaacctgtaacctt 201  Q
      |||||||||| ||| |||| || |||||    
T  18512557 gttgtttccaggacttgaacccgtgacctt 18512586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 22698977 - 22699141
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccggg-aaggggttccacca--tttggtgtattgtacgcag-cctaccctg-tttttacactagagac 173  Q
    ||||||||||| ||||||||||||| ||||| ||||| || |||| ||||||  ||||||||||||||||||| | ||||||| ||||||||| ||||||    
T  22698977 ccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagac 22699076  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | |||||||| ||| ||||  ||||||| ||||||||| ||||||| |||||||| |||| ||||    
T  22699077 tatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaag 22699141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 42476994 - 42476838
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagagactgtttcc 180  Q
    ||||||||| |||||||||||| |||| | |  ||||||||| ||||||||||||||||||||||||||||  |||  |||||||| |||||||||||||    
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagagactgtttcc 42476895  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||  ||| || | || |||||  |||||||| ||||||| |||||||| | ||||||    
T  42476894 agaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaa 42476838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 13805216 - 13805077
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagggctt 187  Q
    ||||||||||||||||||||| || ||||| ||| ||||||||||||||||||||| ||||| |||||   |||||||| |||| || |||||||| |||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggactt 13805117  T
Q  188 aaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
     |||| || ||||| ||||||||| ||||||| |||||||    
T  13805116 gaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 27889320 - 27889398
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27889320 ggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcct 27889398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 46354302 - 46354158
Alignment:
Q  98 gcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggcttaaacct 193  Q
    ||||| || ||| |||||||||||| ||||||||  ||||||||||||||||||| ||||||| ||||||||| ||||  |||||||||| ||| ||||     
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  194 gtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || |||||||| |||||| ||||||| |||||||| |||||||||    
T  46354202 gtgaccttccaatcacatgacaacaactttaccagttgcgccaag 46354158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 19265938 - 19265791
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    ||||||||||||||||||| |||| | |||  |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| || | ||||     
T  19265938 ccggtgcactaaagctcccacatatgtaggt-ccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgta 19265840  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||| | ||| |||| || ||||| ||||||| | ||||||| ||||||    
T  19265839 tccaagacttgaacccgtgacctttcagtcacgtgacaacaactttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 39124018 - 39123865
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag-----cctaccctgtttttacactagagac 173  Q
    ||||||| ||||||||| ||||||||||| |||||||||||| ||||||  ||||||||||| |||||||     |||||||||||||||||| ||||||    
T  39124018 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 39123919  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
     ||||| ||| ||| |||| ||  | || ||||||||| ||||||| |||||||    
T  39123918 cgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 23419688 - 23419833
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttcc 180  Q
    ||||||||||| |||||| ||||| || |  ||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||| |||| ||||||||    
T  23419688 tgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttcc 23419787  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||  ||| ||||||| |||||  |||||||| ||| ||| ||||||    
T  23419788 agaacttgaacctgtgaccttttagtcacatgacagcaactttacc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 35787273 - 35787378
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| |||||||| | ||||||||||||||||| || |||||||||||| || ||||||||||||||||||||| || |||| ||||||||||| ||||    
T  35787273 ggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacacaagag 35787372  T
Q  172 actgtt 177  Q
     |||||    
T  35787373 gctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 238
Target Start/End: Original strand, 2662943 - 2663102
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagact 174  Q
    |||||||||| ||| |||||||||||| |||||| | |  ||||| | ||||||||||||||||||||||||||| ||||||  |||||||| |||| ||    
T  2662943 aatccggtgcgctagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccct-attttacacaagaggct 2663040  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||| ||| ||||| | ||  ||||||||||| ||||||| ||||| || |||||||||    
T  2663041 gtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgccaag 2663102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 14732827 - 14732993
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||||||||||||||||||||||||||  |||||  |||||||| ||| |||||  |||||||||||| |||||||| ||||||| ||||||||   ||    
T  14732827 caatccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatggga 14732925  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||||| ||| ||||  | || || ||||||||| ||||||| |||||||| |||||||||    
T  14732926 ggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaag 14732993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 11741924 - 11741778
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||  ||||   |||||||||| | ||||||||||||||||||||||||||| ||||||  ||||||||||||     
T  11741924 ggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccct-attttacactagaa 11741826  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa 219  Q
     |||||| |||| ||| ||||  | ||||| ||||||||| |||||||    
T  11741825 gctgttttcaggacttgaacccatgacctttcagtcacatgacaacaa 11741778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 18747612 - 18747507
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg--tttttacactagagactg 175  Q
    |||||||||||||||||||||||||||||||  | ||||||||| |||||| |||||||||| ||||||||| |||||||  ||||||||| | || |||    
T  18747612 ccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctg 18747513  T
Q  176 tttcca 181  Q
    ||||||    
T  18747512 tttcca 18747507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 19266564 - 19266491
Alignment:
Q  90 aagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||||| ||||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttt 19266491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 28362156 - 28362304
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    ||||||||| ||||||||| |||| ||| || | |||||||||| ||||||||||||||||||||||||||| ||||  | ||||||||| |||| | ||    
T  28362156 ccggtgcac-aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagt 28362254  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||| ||| ||| ||||||| ||||| ||| ||||| ||||||| ||||||    
T  28362255 ttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 45018935 - 45019009
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca----tttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    |||||| |||||||||||||||    
T  45018935 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagcct 45019009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 1408588 - 1408476
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    |||||||||||| ||||||| | | |||||||||||| |||||||||||| |||||||||| |||||||||| ||||| |||| || ||||||||| |||    
T  1408588 ggcaatccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaaga 1408489  T
Q  171 gactgtttccagg 183  Q
    | || ||||||||    
T  1408488 ggctatttccagg 1408476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 31591113 - 31591223
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| ||| || |||||||||||| |||||||||  |||||||||||||||| ||| ||| |||||||| ||||    
T  31591113 ggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctg-ttttacacaagag 31591211  T
Q  172 actgtttccagg 183  Q
      ||||||||||    
T  31591212 gttgtttccagg 31591223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 29907549 - 29907410
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccct-gtttttacactag 169  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||| |||||| |||||||||||| |||||||| ||| ||  ||||||||| ||    
T  29907549 ggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacacaag 29907452  T
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
    || ||||||| ||| ||| |||| || ||||| |||||||||    
T  29907451 aggctgtttctaggacttgaacccgtgacctttcagtcacat 29907410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 236
Target Start/End: Original strand, 28078151 - 28078300
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagggct 186  Q
    |||||||| |||||| |||||   ||||||||||| |||||||||||||||||| | ||| || ||||||||||||  ||  ||||||||||| ||| ||    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggact 28078250  T
Q  187 taaacctgtaaccttccagtcacatcacaacaattttaccagctgcgcca 236  Q
    | |||| || ||||| ||||||||| ||||||| || || || |||||||    
T  28078251 tgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgcca 28078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 3469190 - 3469338
Alignment:
Q  84 gcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg---tttttacactagagactgtt 177  Q
    |||||||||||||||||||| ||||| |  ||||||||| || |||  |||||||||||||||||| || |||||||   ||||||||| ||||| ||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtt 3469289  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || ||| ||| |  |||| ||||| ||||||||| ||||||| ||||||    
T  3469290 tctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 7645066 - 7644921
Alignment:
Q  94 tcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgc-agcctaccctgttttt-acactagagactgtttccagggcttaaa 190  Q
    |||||||||||||||| | || ||||||| |||| |||| |||||||||||||| | | |||||||||||| |||| |||| ||||||||||| ||| ||    
T  7645066 tcccgcatacgcagggtcagg-aaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaa 7644968  T
Q  191 cctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    || || ||||| ||||||| | ||||||| ||||||| ||||||||||    
T  7644967 cccgtgacctttcagtcacgttacaacaaatttacca-ctgcgccaag 7644921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 14099030 - 14099165
Alignment:
Q  93 ctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttccagggcttaaa 190  Q
    |||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||||| | || |||| ||||||||| | || || |||||||| ||| ||    
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaa 14099129  T
Q  191 cctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||  | ||||| ||||||||| ||||||| ||||||    
T  14099130 cccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 14409047 - 14409182
Alignment:
Q  93 ctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttccagggcttaaa 190  Q
    |||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||||| | || |||| ||||||||| | || || |||||||| ||| ||    
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaa 14409146  T
Q  191 cctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||  | ||||| ||||||||| ||||||| ||||||    
T  14409147 cccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 18327085 - 18326998
Alignment:
Q  151 taccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||||||||| |||| |||||||| || ||| |||| || |||||| |||||||| ||||||| |||||||| |||||||||    
T  18327085 taccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaag 18326998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 21566561 - 21566442
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcctacc-ctg-tttttacactagagactg 175  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| | |||| ||||||||||||||||||| || || ||| ||||||||| |||| | |    
T  21566561 ccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcgg 21566462  T
Q  176 tttccagggcttaaacctgt 195  Q
    |||||| | ||| |||||||    
T  21566461 tttccaagacttgaacctgt 21566442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 23231681 - 23231610
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| ||| |||| |||||||| ||||||||||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagcct 23231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 36267826 - 36267901
Alignment:
Q  78 tccggtgcactaaagctcccgcatacgcagggaccggg-aaggggttccaccatttggtgtattgtacgcagccta 152  Q
    |||||||||||||||||||||||||| |||||  |||| || |||| | |||||||||||||||||||||||||||    
T  36267826 tccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcagccta 36267901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 32233145 - 32233290
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    |||||||||| |||||||| |||| ||||||   |||||||  | ||||||||||||||| | ||||| ||| |||||||||||||||| ||||  ||||    
T  32233145 ccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtt 32233244  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaatttt 223  Q
    |||||| ||| ||||  | ||||| ||||||  | |||||||||||    
T  32233245 tccaggacttgaacccatgacctttcagtcaggtgacaacaatttt 32233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 42495919 - 42496006
Alignment:
Q  151 taccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||||||| || |||| ||||||||||| ||| |||| || ||||| |||||| || ||||||| |||||||| |||||||||    
T  42495919 taccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaag 42496006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 1423972 - 1424080
Alignment:
Q  131 ttggtgtattgtacgcagcct-accctgttttt-acactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |||||||| |||| ||||| | ||||||||||| |||| | ||||||||||||||  || || | || ||||||||||||||| ||||||| ||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccag 1424071  T
Q  229 ctgcgccaa 237  Q
     ||||||||    
T  1424072 ttgcgccaa 1424080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7794597 - 7794673
Alignment:
Q  158 tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
    ||||||||  |||| ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| |||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 21139761 - 21139852
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagaga 172  Q
    ||||||||||||| |||||||| ||| |  ||||||||||| ||||||||||||||| ||||  || || ||| |||||||||||| |||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttttacacaagaga 21139852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 42495874 - 42495913
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggg 120  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 48123508 - 48123643
Alignment:
Q  93 ctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtt-tttacactagagactgtttccagggcttaaa 190  Q
    |||||||||| ||| || || | ||||||| |||||||||||||||||||| ||||   ||||||||| ||||||| |||| ||||||||||| ||| ||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaa 48123607  T
Q  191 cctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||  | ||||| ||| ||||| | ||||| ||||||    
T  48123608 cccatgacctttcagacacatgataacaactttacc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 42101899 - 42102044
Alignment:
Q  84 gcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttcc 180  Q
    ||||||||||| ||| |||||||||| ||||||| |||| |||||| ||| | ||| |||||||||   ||||||| |||||||   |||| ||||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||| ||| ||| | | ||||||||||||| | ||||||| ||||||    
T  42101999 aggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 8148960 - 8149023
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca 147  Q
    ||||||||| ||| |||||||||| |  | |||||||||| ||||||||||||||||||||||||    
T  8148960 tgcactaaaactctcgcatacgcaagt-ctgggaaggggtcccaccatttggtgtattgtacgca 8149023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 33500635 - 33500587
Alignment:
Q  84 gcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattt 33500587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 36602578 - 36602542
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcaggg 109  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36602578 ggcaacccggtgcactaaagctcccgcatacgcaggg 36602542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 15108441 - 15108512
Alignment:
Q  113 gggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtttccagg 183  Q
    |||||||| | |||| ||||| |||||||||| |||||| ||| ||||||||||| ||| ||||||||||||    
T  15108441 gggaagggatcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccagg 15108512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 16341404 - 16341301
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    ||||||||| |||||||||||||| |   || |||||||| ||  |||||| |||||||||||||||| |||| ||||||| ||||||||| |||| |||    
T  16341404 ccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacacaagaggctg 16341305  T
Q  176 tttc 179  Q
    ||||    
T  16341304 tttc 16341301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 17048831 - 17048910
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||||||||||  |||| ||| |  ||||||||||||||||||| |||||||||||||||| | || ||||||||||||    
T  17048831 cactaaagctcctacataagcaagttccgggaaggggttccaccattttggtgtattgtacgtaaccttaccctgttttt 17048910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 23618981 - 23619052
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtac 144  Q
    ||||| ||| |||||||||||||| ||| ||||| || | | |||||||| |||||||||| ||||||||||    
T  23618981 ggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtac 23619052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 44123641 - 44123780
Alignment:
Q  88 taaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtttccagggct 186  Q
    ||||||||| |||||||||| | ||| ||| |||| |||  || |||||||||  | ||| ||| ||| ||||||||||| |||| ||||||||||  ||    
T  44123641 taaagctcctgcatacgcagtgtccgagaacgggtcccattatatggtgtatttcatgcaaccttaccttgtttttacacaagaggctgtttccagtact 44123740  T
Q  187 taaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    | |||| |||| ||| ||||||||| ||| ||| ||||||    
T  44123741 tgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 23065929 - 23066003
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca 147  Q
    ||||||||||||||| ||||||||| |||| |||||   ||| ||||| | ||| ||| ||||||||||||||||    
T  23065929 ggcaatccggtgcaccaaagctcccacatatgcaggattcggaaagggatcccatcatatggtgtattgtacgca 23066003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 13792161 - 13792230
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgcag 148  Q
    |||||||| |||||||| ||||||||||||  || |||||||| || |||||| ||||||||||| ||||    
T  13792161 cggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgtatgcag 13792230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 109
Target Start/End: Complemental strand, 25434144 - 25434115
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcaggg 109  Q
    ||||||||||||||||||||||||||||||    
T  25434144 cggtgcactaaagctcccgcatacgcaggg 25434115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 1524182 - 1524250
Alignment:
Q  78 tccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    |||||||||||||||||||||||||   |||||||  ||||| || |  ||||||||||| ||||||||    
T  1524182 tccggtgcactaaagctcccgcatatatagggaccaagaaggagtcctgccatttggtgttttgtacgc 1524250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 27474434 - 27474278
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccctgtttttacactagag 171  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||||||  | |||||||||||||| ||||    
T  27474434 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacacaagag 27474335  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |||||||||| | ||| ||||||| ||||| ||||||||| ||||||| ||||||||    
T  27474334 actgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccag 27474278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 18944800 - 18944630
Alignment:
Q  73 ggcaatccggtgcactaaa-gctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acact 167  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| ||||     
T  18944800 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacaca 18944701  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||||| ||| ||||||| ||||| ||||||||| ||||||| |||||||| |||||||||    
T  18944700 agaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 18944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 34725102 - 34725267
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||| |||||||| ||||    
T  34725102 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg-ttttacacaagag 34725200  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  34725201 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 34725267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 23768325 - 23768486
Alignment:
Q  74 gcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagag 171  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  23768325 gcaatccgctgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagag 23768424  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcg 233  Q
     ||||||||| | ||| ||||||| ||||| ||||||||| ||||||| |||||||| ||||    
T  23768425 gctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 45402250 - 45402082
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cct---accctgtttttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||  ||   ||||||||||||||| |    
T  45402250 ggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaa 45402151  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || |||||||| |||||| ||||||| |||||||| |||||||||    
T  45402150 gaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaag 45402082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 46991958 - 46991791
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||||||| ||||| ||||||| ||||||||| |||    
T  46991958 ggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaaga 46991859  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |  |||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| ||| |||||    
T  46991858 ggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaag 46991791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 6925247 - 6925097
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactagagactgtt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||  ||||||||| |||| || ||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatt 6925148  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |||||| ||| |||| || ||||||||||||||| ||||||| ||||||||    
T  6925147 tccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 6925097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 32632569 - 32632727
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    |||||||| ||||||||||||| ||||||   |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 32632668  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||| |||| || ||||| |||||| || ||||||| |||||||| |||||||||    
T  32632669 caggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaag 32632727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 38478286 - 38478451
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  38478286 ggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 38478384  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||| ||| ||| |||| || ||||| ||||||||| ||||||| ||||| || |||||||||    
T  38478385 gctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaag 38478451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 46247957 - 46248124
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactaga 170  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||| |||    
T  46247957 ggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 46248056  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | ||||||||| | ||| |||| || || || ||||||||| ||||||| |||||||| || ||||||    
T  46248057 ggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaag 46248124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 47214660 - 47214499
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagact 174  Q
    |||| ||||||||| |||||||||||| |||||| | |||||||||| |||||||||||||||||||||||| || ||||||| ||||| || |||||||    
T  47214660 aatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttaaacaagagact 47214562  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaa 237  Q
    ||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| ||||||||    
T  47214561 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 47214499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 41319810 - 41319967
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt-acactaga 170  Q
    ||||| || ||||||| || |||||||||| | ||||  ||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||| |||    
T  41319810 ggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaaga 41319909  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| ||||||| ||||||||    
T  41319910 gactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccag 41319967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 10668381 - 10668235
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| || |||| || ||||||||| |    
T  10668381 ggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaa 10668282  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcaca 215  Q
    ||| ||||||||||| ||| |||| || ||||| |||||||||||||    
T  10668281 gaggctgtttccaggacttgaacccgtgacctttcagtcacatcaca 10668235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 238
Target Start/End: Original strand, 30395737 - 30395899
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acactagagactg 175  Q
    ||||||||||||||||||||||| || ||| |||||||||||| ||||||||  |||||||||||||||||||| ||||||||||| |||| |||| |||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 30395836  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||| ||| |||| || |||||  |||||||| ||||||| |||||||| |||||||||    
T  30395837 tttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaag 30395899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 20004094 - 20004263
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgttttt-acacta 168  Q
    ||||| |||||||||||||||||||||||| || ||| | |||||||||| ||||||||  |||||||||||||||||||| ||| ||||||| |||| |    
T  20004094 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacga 20004193  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||| ||| |||||    
T  20004194 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaag 20004263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 45812541 - 45812706
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| ||||||   |||||||||| |||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccct-cttttacacaagag 45812639  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||| |||| ||| ||||||| ||||| ||||||||| ||||||| |||| ||| |||||||||    
T  45812640 actgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaag 45812706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 238
Target Start/End: Complemental strand, 14617186 - 14617025
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtt-tttacactagagactgt 176  Q
    |||||||||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||| || |||| |||| ||||||| |||| ||||    
T  14617186 ccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgt 14617087  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||| ||| |||  || ||||| ||||||||| ||||||| |||||| | |||||||||    
T  14617086 ttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 14617025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 35253191 - 35253329
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  35253191 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 35253289  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacat 211  Q
     ||||||| ||| ||| |||| || | ||| |||||||||    
T  35253290 gctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 4349792 - 4349702
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  4349792 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 4349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 12126850 - 12127006
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttcc 180  Q
    |||||||| |||||||||||| |||||| |||||||||||| |||| |||||||||||||||||||||| ||||||| |||||||| |||  ||||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg-ttttacacaagaagctgtttcc 12126948  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||  |||||||| || ||||| || | |||| ||||||| ||||| || |||||||||    
T  12126949 agaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaag 12127006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 27201793 - 27201645
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgttt-ttacactagagactgttt 178  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||  ||||||||||||||||||||| |||||||||| | |||| |||| ||||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||||| ||| ||||  | ||||| ||||||||| ||||||| |||||||    
T  27201693 ccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 31382218 - 31382329
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||| || ||||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  31382218 ggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagag 31382317  T
Q  172 actgtttccagg 183  Q
     |||||||||||    
T  31382318 gctgtttccagg 31382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 4430081 - 4430199
Alignment:
Q  124 ccaccatttggtgtattgtacgcagcct-accctgttttt-acactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaatt 221  Q
    ||||||||||||||||||||||||| || ||||||||||| |||| ||| ||||||| || | |||||||| || ||||||||||||||| ||||||| |    
T  4430081 ccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaact 4430180  T
Q  222 ttaccagctgcgccaagat 240  Q
    |||||||||||||||||||    
T  4430181 ttaccagctgcgccaagat 4430199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 11596650 - 11596527
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttccagggctt 187  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||  |||||| ||| |||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggactt 11596551  T
Q  188 aaacctgtaaccttccagtcacat 211  Q
     |||| || || || |||||||||    
T  11596550 gaacccgtgacatttcagtcacat 11596527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 18724565 - 18724704
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggct 186  Q
    |||||||||||||| | |||| |||||||||||| |||  |||||||||||||||| ||||| ||||||| ||||||||| |||| ||||||||||| ||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggact 18724664  T
Q  187 taaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    | |||| || ||||| ||||||||| ||||||| ||||||    
T  18724665 tgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 19414591 - 19414437
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||| || |||| |||||||  ||||    
T  19414591 ggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg-ttttacataagag 19414493  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
     || |||| ||| ||| |||| || ||||| |||||| || ||||||| |||||||    
T  19414492 gctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 35005279 - 35005139
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg-tttttacacta 168  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||  |||||||||||||| |||||| ||||||| ||||||||| |    
T  35005279 ggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaa 35005180  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcac 209  Q
    ||| |||||| || | ||| |||| || ||||| |||||||    
T  35005179 gaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 6983821 - 6983969
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca-gcctaccctg-tttttacactagagactgt 176  Q
    ||||||||| |||||||| || ||||||||| |||| ||||||| ||||||||||||||||||||||||  | ||||||| |||||| ||  ||| ||||    
T  6983821 ccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac--gaggctgt 6983918  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    ||||||| ||| ||||||| ||||| ||||||| | ||||||| |||||||    
T  6983919 ttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 10378745 - 10378828
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt 161  Q
    |||||||||||||||||||||||| |||||| ||  |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  10378745 ccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 18741967 - 18742132
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctg--tttttacactagagac 173  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| ||||||  ||||||||||||||||||||| |||||||  |||||| || | ||||    
T  18741967 ccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaagac 18742066  T
Q  174 tgttt-ccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||| ||| |  || ||||  | ||||| ||||||||| ||||||| |||||||| |||||||||    
T  18742067 tgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaag 18742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 35117775 - 35117927
Alignment:
Q  79 ccggtgcactaaagctcccgcat-acgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgt-ttttacactagagac 173  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| ||| ||  ||||||||||||||| ||||| |||||||| |||||||| |||| |    
T  35117775 ccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggc 35117874  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    | |||||||| ||| |||| || ||||| ||||||| | ||||||| ||||||    
T  35117875 tatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 42304211 - 42304303
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||  ||| |||||||||||||| || ||||||||||||    
T  42304211 ggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 20036368 - 20036218
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc-agcctaccc--tgtttttacactagagactg 175  Q
    ||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |||| | | |||||  | | ||||||| ||||  ||    
T  20036368 ccggtgcacaaaa-ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttg 20036270  T
Q  176 tttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    |||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||    
T  20036269 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 22325039 - 22324937
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgtttttacactagagactgtt 177  Q
    |||||||||||||||||||||||||||||  ||||| |||| |||||||  |||||||||||||| |||||| |||||||||||||||| |||| |||||    
T  22325039 ggtgcactaaagctcccgcatacgcaggg-tcgggacggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtt 22324941  T
Q  178 tcca 181  Q
    ||||    
T  22324940 tcca 22324937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 2435795 - 2435946
Alignment:
Q  78 tccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgca-gcctaccctgttttt-acactagagact 174  Q
    |||||||||||||||||||||||| || ||||  ||| ||||||| |||||| |||||||||||||||||| || |||||| ||||| ||||  ||| ||    
T  2435795 tccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggct 2435894  T
Q  175 gtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    ||||||||| ||| |||| || ||||| ||||||| | ||||||| ||||||    
T  2435895 gtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 22930104 - 22930238
Alignment:
Q  104 gcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtttccagggcttaaacctgtaaccttc 202  Q
    |||||| || ||||||||| ||||||||||||||||||| | || ||| ||||||||||||||| | || ||||||||||| ||| ||||  | |||||     
T  22930104 gcagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgaccttt 22930202  T
Q  203 cagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||| ||||||| |||||||| |||||||||    
T  22930203 cagtcacatgacaacaactttaccagttgcgccaag 22930238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 1517315 - 1517393
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||| |||||||||||||||||| |||||||||||| | | |||||||| |||||| |||||||||||||||||||||    
T  1517315 ggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagcct 1517393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 15511158 - 15511311
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgta--cgcagcc-taccctg-tttttacactagagac 173  Q
    ||||||||||||||||| | ||||||||||| || ||||||||| |||||| ||||||||||||||  ||||||| ||||||| ||||||||| |||| |    
T  15511158 ccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagaggc 15511257  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
     ||||||||| ||| ||  ||| ||||| ||| ||||| ||||||| |||||||    
T  15511258 ggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 33223093 - 33222968
Alignment:
Q  118 ggggttccaccattt-ggtgtattgtacgcagccta-ccctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcaca 215  Q
    ||||| ||||||||| ||||||||||||||| |||  |||||||||||||| |||| ||||||||| | |||||| | || ||||| ||||||||| |||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgaca 33222994  T
Q  216 acaattttaccagctgcgccaagata 241  Q
    |||| |||||| | ||||||||||||    
T  33222993 acaactttaccggttgcgccaagata 33222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 15505710 - 15505643
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag 148  Q
    |||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  15505710 cggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcag 15505643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 25468285 - 25468421
Alignment:
Q  91 agctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggctta 188  Q
    ||||||||||||||||||| | |||||| ||| | |||||||||||||||||||||| || ||||||| ||||||||| ||||  |||||||||| |||     
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  189 aacctgtaaccttccagtcacatcacaacaattttac 225  Q
    ||||  | ||||| || |||||| ||||||| |||||    
T  25468385 aacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 44485120 - 44485267
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgt-ttttacactagagactgt 176  Q
    ||||||||| |||||||||||||||| |||  |||||||||||| | ||||||||||||||||||||||||| |||| ||| |||||||| || |  |||    
T  44485120 ccggtgcac-aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgt 44485218  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    ||||||| ||  |||| || ||||| || |||||| ||||||| |||||    
T  44485219 ttccaggactataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 8197197 - 8197030
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactaga 170  Q
    ||||| ||||| ||||||||||||  ||||||||||| ||| |||||||| | ||||||||||||| |||||| |||| |||| || ||||||||| |||    
T  8197197 ggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaaga 8197098  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | |  || ||||| ||| |||| || ||||| ||||||||| ||||||| || ||||| ||| |||||    
T  8197097 ggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaag 8197030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 19701717 - 19701570
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtt 177  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||| || || ||||  | ||||||||| |||| |||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgtt 19701618  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    | || | |||||||| || || || ||||||||  ||||||| |||||    
T  19701617 ttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 23796613 - 23796506
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    |||||||||||||||||| ||||| |||||| | ||||||||||  ||||||||||||||||||||||| || |||  || ||||||||| |||| ||||    
T  23796613 ccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgt 23796514  T
Q  177 ttccaggg 184  Q
    ||||||||    
T  23796513 ttccaggg 23796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 4430014 - 4430080
Alignment:
Q  84 gcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc 150  Q
    |||||||||||||||||||| ||||  || | |||||||||||||||||||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcagcc 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 238
Target Start/End: Complemental strand, 9939612 - 9939447
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaa-ggggttccacca--tttggtgtattgtacgcagcc-taccctgttt-ttacactagagac 173  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||  |||||||||||| ||||| || |||| ||||| ||| || ||||      
T  9939612 ccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggt 9939513  T
Q  174 tgtttccagggcttaaacctgtaaccttccagtcacatcacaacaa-ttttaccagctgcgccaag 238  Q
    |||||||||| ||| |||  || ||||| ||||||||| ||||||| ||||||| | |||||||||    
T  9939512 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaag 9939447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 43768287 - 43768205
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgttt 160  Q
    |||||||| ||||||||||| |||||||||| | |||||||||| |||||| ||||||||||||| |||||| ||||||||||    
T  43768287 ccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 20999860 - 20999932
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||||||| |||||||||  | ||||||||  ||| ||||||||||||||||||||||||    
T  20999860 ccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagcct 20999932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 50606557 - 50606498
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  50606557 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 4587568 - 4587630
Alignment:
Q  74 gcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtg 136  Q
    |||| |||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 50812085 - 50812004
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||| ||||||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||| || ||||||||||||    
T  50812085 gtgcattaaagctcccgcatacgcagggcgcgggaagggg-tccaccattttggtgtattgtacgcaaccttaccctgttttt 50812004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 19932765 - 19932849
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    |||||||||| | ||  |||||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||    
T  19932765 ggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 31442399 - 31442484
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgttttt 162  Q
    ||||||||| ||||||||| ||||| ||| | |||||||||||| |||||| |||||||||||||||||| || ||||||||||||    
T  31442399 ccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgttttt 31442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 35019377 - 35019306
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||| |||||| ||||||||||||| |||||||    
T  35019377 ccggtgcactaaagctctcgcatacgcagggtctggg-aggggtcccaccaattggtgtattgtatgcagcct 35019306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 21723811 - 21723728
Alignment:
Q  99 catacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttcca 181  Q
    ||||||||||| |||||||  ||||| ||||||||||||||||||| ||||| |||||| |||||| || |||| |||||||||    
T  21723811 catacgcagggtccgggaaaaggttctaccatttggtgtattgtactcagccttaccctatttttatacaagaggctgtttcca 21723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 31272397 - 31272516
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagactgtttccagg 183  Q
    ||||||||||||||||||||||||| |||| |       |||||||||| |||  |||||||||||| ||| ||||||||||| ||||  ||||||||||    
T  31272397 cactaaagctcccgcatacgcagggtccggaac------ccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccagg 31272490  T
Q  184 gcttaaacctgtaaccttccagtcac 209  Q
     ||| ||||||| ||||| |||||||    
T  31272491 acttgaacctgtgacctttcagtcac 31272516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 4249455 - 4249520
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    |||||| |||||||||||||||| || ||  ||||||||| | |||||||||||||||||||||||    
T  4249455 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 4249779 - 4249844
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    |||||| |||||||||||||||| || ||  ||||||||| | |||||||||||||||||||||||    
T  4249779 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 4250103 - 4250168
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    |||||| |||||||||||||||| || ||  ||||||||| | |||||||||||||||||||||||    
T  4250103 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 19974087 - 19974188
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||||||||||  || | ||||||| |||| ||| || |||||||||||||||||| || | |||| |||||||||| ||| |||||||    
T  19974087 gtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctatttttacacttgaggctgtttc 19974186  T
Q  180 ca 181  Q
    ||    
T  19974187 ca 19974188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 30555263 - 30555210
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||    
T  30555263 ccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 33594144 - 33594196
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttgg 134  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||| ||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 17470361 - 17470505
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttc 179  Q
    ||||||||||||||| ||||||||||   | |||| |||| |||| | ||||||||||||||||||||| ||||||| ||||||||| |||| |||||||    
T  17470361 tgcactaaagctcccacatacgcagg--tcaggaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttc 17470458  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
     ||| ||| ||||  | ||| | ||||||| | ||||||| ||||||    
T  17470459 taggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 45264411 - 45264482
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcct 151  Q
    |||||||||||||||||||||| |||||| | | |||||||| |||||| |||||||||||| || ||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagcct 45264482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 21910692 - 21910746
Alignment:
Q  112 cgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttaca 165  Q
    ||||||||||| |||||||||||||||||||||||| || |||||| ||||||||    
T  21910692 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttaca 21910746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 28894570 - 28894636
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca 147  Q
    ||||||||||||||| |||||| |||||| |  ||||||||||  |||||||| |||||||||||||    
T  28894570 ggtgcactaaagctctcgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgca 28894636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 30682950 - 30682900
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtat 139  Q
    |||||||||||||||||| || |||||||||||| |||||||||| |||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat 30682900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 6358264 - 6358199
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagc 149  Q
    |||||||| ||| |||||||||||| | |||||||||| |||||| |||||||| |||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgcagc 6358199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 23371270 - 23371206
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtac 144  Q
    |||||||||||||||| || ||||||||||| | || ||||||| ||| |||||||||||||||||    
T  23371270 ccggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtac 23371206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 25554746 - 25554795
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    |||| ||||||||||||| ||||||||||||||||||  |||||||||||    
T  25554746 ggcagtccggtgcactaatgctcccgcatacgcagggttcgggaaggggt 25554795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 34148974 - 34149077
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt-tacactagagactgtttcc 180  Q
    |||||||  ||||| ||||| |||||| || |||||||||  ||||||||||| | ||||||||| || |||||| |||| ||||| |||| ||||||||    
T  34148974 tgcactagcgctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttcc 34149073  T
Q  181 aggg 184  Q
    ||||    
T  34149074 aggg 34149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 41440606 - 41440665
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    |||| |||||| ||||||||||||||||||| ||| | |  |||||||||||||||||||    
T  41440606 ggcagtccggttcactaaagctcccgcatacacagagtctaggaaggggttccaccattt 41440665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 39214968 - 39215074
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccctg-tttttacactagagactg 175  Q
    |||||||||||||||| || |||||||||||   |||||||||  |||||| |||||  |||||||||||||| ||||| | ||||||||| ||||  ||    
T  39214968 ccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggttg 39215067  T
Q  176 tttccag 182  Q
    |||||||    
T  39215068 tttccag 39215074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 16120862 - 16120821
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    |||||| ||||||||||||||| |||||| ||||||||||||    
T  16120862 ggtgcattaaagctcccgcatatgcaggggccgggaaggggt 16120821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10158341 - 10158281
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacg 145  Q
    ||||||||||| || ||||||| |  || | ||||||| ||||||||||||||||||||||    
T  10158341 cactaaagctctcgtatacgcatgatcctgaaaggggtgccaccatttggtgtattgtacg 10158281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 34714678 - 34714610
Alignment:
Q  170 agactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||||||||||| | ||| |||| || ||||| || |||||| ||||||| |||||||| |||||||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaag 34714610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 30708 - 30543
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  30708 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg-ttttacacaagag 30610  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  30609 gctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaag 30543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 1354761 - 1354926
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  1354761 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 1354859  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  1354860 gctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaag 1354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 1347093 - 1346928
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| || |    
T  1347093 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagtg 1346995  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  1346994 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 1346928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 29355859 - 29356013
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctgttt-ttacacta 168  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| |||||||||| |||||| |    
T  29355859 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaa 29355958  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaatttt 223  Q
    ||| ||||||||||| ||| |||| || ||||| ||||||||| |||||||||||    
T  29355959 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttt 29356013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 12221918 - 12222088
Alignment:
Q  73 ggcaatccggtgcactaaa-gctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctg-tttttacact 167  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||  |||||||||||||||||||| ||||||| |||||||||     
T  12221918 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 12222017  T
Q  168 agagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||| ||||||||| | ||| |||| || ||||| ||||||||| ||||||| |||||||| |||||||||    
T  12222018 agaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 9161247 - 9161099
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt--tggtgtattgtacgcagcct-accctgtttttacactagagactgtt 177  Q
    |||||||||||||| |||||||||||||| ||| |||||||| ||||||||  || ||||||||||||||||| || |||||||||||| |||| |||||    
T  9161247 ggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtttttacacaagaggctgtt 9161148  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    |||||| ||| ||||||| ||||| ||||||||| ||||||| ||||||    
T  9161147 tccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 25557854 - 25557744
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  25557854 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg-ttttacacaagag 25557756  T
Q  172 actgtttccagg 183  Q
     |||||||||||    
T  25557755 gctgtttccagg 25557744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 3815087 - 3815248
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccct-gtttttacactagagactgt 176  Q
    |||||||||||||||| ||||||||| ||||  |||||| |||| ||||||||||||||||||||||||| | |||| |  ||||||||| | || ||||    
T  3815087 ccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgt 3815186  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||| ||| |||| || || || ||||||||| ||||||| |||||||| |||||||||    
T  3815187 ttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaag 3815248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 26097289 - 26097179
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||  ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  26097289 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg-ttttacacaagag 26097191  T
Q  172 actgtttccagg 183  Q
     |||||||||||    
T  26097190 gctgtttccagg 26097179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 2166414 - 2166579
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctgt-ttttacacta 168  Q
    ||||| |||||||||||||||||||| |||   |||| |||||||||||| |||||||  ||||||||||||||||| || || ||||| |||||||| |    
T  2166414 ggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaa 2166513  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
    |||  |||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||| || |||||    
T  2166514 gaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 2178047 - 2178212
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgcagcc-taccctgt-ttttacacta 168  Q
    ||||| |||||||||||||||||||| |||   |||| |||||||||||| |||||||  ||||||||||||||||| || || ||||| |||||||| |    
T  2178047 ggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaa 2178146  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgc 234  Q
    |||  |||||||||| ||| |||| || ||||| ||||||||| ||||||| ||||| || |||||    
T  2178147 gaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 13267856 - 13267788
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattg 141  Q
    ||||| |||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  13267856 ggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 23930138 - 23930205
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca 147  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| ||||||||||||||||    
T  23930138 cggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 32579543 - 32579436
Alignment:
Q  86 actaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgca-gcctaccctgtttttacactagagactgtttccaggg 184  Q
    ||||||||||||||||| |||||| | |||||||||| ||||||||||| |||||||||||| || |||| | |||||| || |||| |||||||||||     
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccagga 32579444  T
Q  185 cttaaacc 192  Q
    ||| ||||    
T  32579443 cttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 7947384 - 7947514
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgtacgcagcc-taccct-gtttttacactagagactgttt 178  Q
    |||||||||||||||| |||||||| || |||||||||||  |||||| ||||||||||||||||||||| |||||| ||||||||||  |||  |||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  179 ccagggcttaaacctgtaaccttccagtcac 209  Q
    |||||  || |||| || ||||| |||||||    
T  7947484 ccaggagttgaaccggtgacctttcagtcac 7947514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 24097696 - 24097545
Alignment:
Q  85 cactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttccag 182  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||    ||||| |||||| ||||||| |||||| || |||| ||| ||| ||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgttttttatacaagaggctggttcgag 24097601  T
Q  183 ggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | |||||||  || ||||| |||| |||| ||| |||||||||||| || ||||||    
T  24097600 gacttaaactcgtgacctttcagtaacatgacatcaattttaccagttgtgccaag 24097545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 23240837 - 23240964
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc-agcctaccctgtttttacactagagactgtttcc 180  Q
    |||||||||||||||||||||||||  | ||  |||||||| |||||| ||||| |||||||||| | | ||||||| |||||||| |||| ||||||||    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctg-ttttacacaagaggctgtttcc 23240935  T
Q  181 agggcttaaacctgtaaccttccagtcac 209  Q
    ||| |||  |||||| ||||| |||||||    
T  23240936 aggacttgcacctgtgacctttcagtcac 23240964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 3116133 - 3116210
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag 148  Q
    |||||||||||| ||||||||||||||||||||| || ||| |||||||| ||||||  ||||||||||||| |||||    
T  3116133 ggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcag 3116210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 6808526 - 6808468
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatt 131  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  6808526 ggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 12886044 - 12885967
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag 148  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||||||| ||||||  ||| |||||||||||||||    
T  12886044 ggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 383764 - 383837
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgc 146  Q
    ||||| |||||| ||| |||||||||||||||||||| | | |||||||| |||| ||||||||||||||||||    
T  383764 ggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 12892140 - 12892064
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattgtacgca 147  Q
    ||||| |||||||||||||||||||||||| || ||| |||||||||||| |||||||  |||||||||| ||||||    
T  12892140 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 238
Target Start/End: Complemental strand, 1941979 - 1941819
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgttttt-acactagagactgtt 177  Q
    |||||||| ||| ||||||||||| || |  || ||| ||||| |||||||| ||||||||||||||||||| ||||||||||| |||| ||||  ||||    
T  1941979 cggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtt 1941880  T
Q  178 tccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    | || | ||| || | |  |||||||||||| || ||||||| |||||||| ||| |||||    
T  1941879 tacatgacttcaatccgcgaccttccagtcagatgacaacaactttaccagttgcaccaag 1941819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 8409311 - 8409207
Alignment:
Q  136 gtattgtacgcagcc-taccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcg 233  Q
    ||||||||||||||| ||||||| ||||||||| |||| | ||||||||| ||| || | || ||||| ||||||||| ||||||| |||||||| ||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T
Q  234 ccaag 238  Q
    |||||    
T  8409211 ccaag 8409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 15866052 - 15866208
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagc-ctaccctg-tttttacactagagactgtttc 179  Q
    |||||||| || ||||||| |||||||| |||||||||||| ||||||||||||||||  ||||||||  ||||||| |||||||   |||| |||||||    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtat--tacgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||  || ||||  | ||||| || ||||||  |||||| |||||||| || ||||||    
T  15866150 caggaattgaacccatgacctttcaatcacatgccaacaactttaccagttgggccaag 15866208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 33138957 - 33138886
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||| | |||||| ||||| |||| || |||| ||||||||||||||||||||||| ||||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggcct 33138886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 28007753 - 28007629
Alignment:
Q  76 aatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctgtttttacactagagact 174  Q
    |||||||||||||| |||| ||||||| | |||    |||||||||| ||| |||||||||||||||||||||||| |||||| |||||||| |||| ||    
T  28007753 aatccggtgcactagagcttccgcatatggaggtta-gggaaggggtcccagcatttggtgtattgtacgcagcctgaccctg-ttttacacaagaggct 28007656  T
Q  175 gtttccagggcttaaacctgtaacctt 201  Q
     |||||||| ||| |||| || |||||    
T  28007655 ctttccaggacttgaacccgtgacctt 28007629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 238
Target Start/End: Complemental strand, 20400796 - 20400631
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagaga 172  Q
    |||| ||||||||||||| | | ||||||| ||||  ||| || |||| || | |||| ||||| ||||||||| | ||||||| ||||||||| |||||    
T  20400796 caattcggtgcactaaagtttctgcatacgtagggttcggaaaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagaga 20400697  T
Q  173 ctgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||   ||| ||||||| ||||| ||||||||| ||||||| | |||||  |||||||||    
T  20400696 ttgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaag 20400631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 14975171 - 14975251
Alignment:
Q  158 tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||||||||| |||| ||||||||||| ||| || | || ||||||||||||||| ||||||| |||||| | |||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaag 14975251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 18277203 - 18277307
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    |||||||| ||||||||||||||||| || | |  ||||||||| ||||||||||||||  ||||| || || ||||||| ||||||||| |||| ||||    
T  18277203 ccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgt 18277302  T
Q  177 ttcca 181  Q
    |||||    
T  18277303 ttcca 18277307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 10734915 - 10734974
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgt 137  Q
    |||||| |||||||||||||||||||||||| |||||||||||  |||||| ||||||||    
T  10734915 ccggtggactaaagctcccgcatacgcagggtccgggaagggggcccaccactttggtgt 10734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 11395886 - 11395827
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgt 137  Q
    |||||| |||||||||||||||||||||||  |||||||||||| |||||| ||||||||    
T  11395886 ccggtggactaaagctcccgcatacgcaggatccgggaaggggtcccaccactttggtgt 11395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 13904991 - 13905138
Alignment:
Q  79 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgt 176  Q
    ||||||||| ||||||||   ||||||||||  |||||| |||| ||||||||||||| |||||| |||||| ||||||| ||||||||| ||||   ||    
T  13904991 ccggtgcac-aaagctccgtgatacgcagggttcgggaaagggt-ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgt 13905088  T
Q  177 ttccagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || |||| ||| | || || ||||| ||||||||| ||||||| ||||||    
T  13905089 tttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 30786378 - 30786427
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggt 122  Q
    ||||| |||||||||||||||||||||||||||| || || |||||||||    
T  30786378 ggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 22967305 - 22967237
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgta 143  Q
    ||||| |||||| | || |||||||||| |||||| ||  |||||||| ||||||||||||||||||||    
T  22967305 caatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 22967237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 23821088 - 23821156
Alignment:
Q  75 caatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgta 143  Q
    ||||| |||||| | || |||||||||| |||||| ||  |||||||| ||||||||||||||||||||    
T  23821088 caatctggtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 23821156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 14975094 - 14975164
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccat--ttggtgtattg 141  Q
    ||||| ||||||||||||| |||||||||| || |||  ||||||||||| |||||||  |||||||||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattg 14975164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 12889548 - 12889402
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt-ggtgtattgtacgcagcc-taccctgttttt-acactagagactgtttc 179  Q
    ||||||||||||||| || ||  |||| |||| ||||||| ||| | ||| ||||||||||| |||||| | |||||||||| |||| |||| ||||||     
T  12889548 tgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaacacaagaggctgtttt 12889449  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttacc 226  Q
    || | ||| ||||||| ||||| || |||| | ||||||| ||||||    
T  12889448 caagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 15865870 - 15865928
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtatt 140  Q
    |||||||| || || |||| |||||||| || ||||||||| |||||||||||||||||    
T  15865870 gtgcactatagatcacgcaaacgcagggtccaggaaggggtcccaccatttggtgtatt 15865928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 32728169 - 32728314
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgttt 178  Q
    |||||||||||| ||||||||||| |||| | ||||| |||  |||| ||||||| |||||||| ||| | ||||||| ||||||||  ||||  |||||    
T  32728169 ggtgcactaaagttcccgcatacgtagggtctgggaaaggg-accactatttggtatattgtacacagtcttaccctgttttttacataagaggttgttt 32728267  T
Q  179 ccagggcttaaacctgtaaccttccagtcacatcacaacaattttac 225  Q
    |||   ||| || |||| ||||| ||||||||| ||||||| |||||    
T  32728268 ccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 6024306 - 6024202
Alignment:
Q  131 ttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccag 228  Q
    |||||||||||||||||| | |||| || ||||||||| |||| ||||||| |||  || || | || |||||||| |||||| ||||||| ||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccag 6024207  T
Q  229 ctgcg 233  Q
     ||||    
T  6024206 ttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 19340949 - 19340889
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccacca-tttggtgtattgt 142  Q
    |||||||||||| |||||||||| ||| || ||||||||| ||| || |||||||||||||    
T  19340949 tgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt 19340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 13028 - 13194
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||||||| ||||||||||||||| | |||||||||| |||||||| |||||||||||||||||| |||| ||||||||| | ||||    
T  13028 ggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagag 13127  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||| | |||||||||    
T  13128 gctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaag 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 80; Significance: 1e-37; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 46962 - 46795
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccct-gtttttacactaga 170  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||  ||||||||| |||    
T  46962 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaaga 46863  T
Q  171 gactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |  |||||||||  ||| |||| || |||||| |||||||| ||||||| |||||||  |||||||||    
T  46862 ggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaag 46795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 24786 - 24938
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagactgtttcc 180  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| |||| |||||       
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt--- 24882  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
      | ||| ||||  | ||||| ||||||||| ||||||| |||||||| |||||||||    
T  24883 --gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaag 24938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 182
Target Start/End: Complemental strand, 43780 - 43679
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaa-ggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagagactgtttcc 180  Q
    |||||||| |||||||||||| |||||| ||| ||| ||||| ||||||||||||||||||||||||||||  |||  |||||||| |||  ||||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagacgctgtttcc 43681  T
Q  181 ag 182  Q
    ||    
T  43680 ag 43679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 46721 - 46770
Alignment:
Q  83 tgcactaaagctcccgcatacgcagggaccgggaaggggttccaccattt 132  Q
    |||| |||||||||||||||||||||| | |||||||||| |||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 10932 - 10774
Alignment:
Q  82 gtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctg-tttttacactagagactgtttc 179  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||| ||||  |||||     
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgtttt 10833  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    |||  ||| |||| || ||||||||||||||| ||||||| |||||||| ||| |||||    
T  10832 cagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaag 10774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 10054 - 10219
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtttttacactagag 171  Q
    ||||| ||||||||||  |||||| ||||| |||||| |||||||||||| |||| |||||||||||||||||||| | ||| ||| |||||||| ||||    
T  10054 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg-ttttacacaagag 10152  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||| ||||    
T  10153 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaag 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 20382 - 20547
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag-cctaccctgtttttacactagag 171  Q
    ||||| ||||||||||  |||||| ||||| |||||| |||||||||||| |||| |||||||||||||||||||| | ||| ||| |||||||| ||||    
T  20382 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg-ttttacacaagag 20480  T
Q  172 actgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
     ||||||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||| |||| ||||    
T  20481 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaag 20547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 11252 - 11096
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcctaccctgtttttacactagagactgtttcc 180  Q
    ||||||||| |||||||||||| |||||| ||||||||| || |||||||||||||||||||| |||||||  | |  |||||||| |||| ||||||||    
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaagaggctgtttcc 11153  T
Q  181 agggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||| |||| || ||||| ||||||||| | ||||| |||||||| |||||||||    
T  11152 aggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaag 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 48638 - 48746
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagag 171  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  48638 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagag 48736  T
Q  172 actgtttcca 181  Q
     |||||||||    
T  48737 gctgtttcca 48746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 24137 - 24215
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  24137 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcct 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 59110 - 58941
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccacca--tttggtgtattgtacgcag-cctaccctg-tttttacacta 168  Q
    ||||| ||| ||||||||||||||||||||||||| | | |||||||||| ||||||  ||||||||||||||||||| | ||||||| |||||| || |    
T  59110 ggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaa 59011  T
Q  169 gagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagctgcgccaag 238  Q
    ||| ||||||||||| ||| |||| || ||||| ||||||||| |||| || |||||||| ||| |||||    
T  59010 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaag 58941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 227
Target Start/End: Original strand, 1599 - 1745
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttttacactagagactgtttc 179  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||| |||||| || |||| |||||||| ||||  |||||     
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg-ttttacacaagaggttgtttt 1697  T
Q  180 cagggcttaaacctgtaaccttccagtcacatcacaacaattttacca 227  Q
    |||| ||| ||||  | ||||| ||||||||| ||||||| |||||||    
T  1698 caggacttgaacccatgacctttcagtcacatgacaacaactttacca 1745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 72879 - 72974
Alignment:
Q  81 ggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcc-taccctg-tttttacactagagact 174  Q
    ||||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||||| |||||| |||| || ||||||||| |||||||    
T  72879 ggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacacaagagact 72974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 3668 - 3597
Alignment:
Q  80 cggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct 151  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| ||| |||| |||||||| ||||||||||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagcct 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 35062 - 35167
Alignment:
Q  114 ggaaggggttccaccatttggtgtattgtacgcagcc-taccctgtttt--tacactagagactgtttccagggcttaaacctgtaaccttccagtcaca 210  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||   |||| ||||||||||| |||| ||| |||| || ||||| ||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcaca 35161  T
Q  211 tcacaa 216  Q
    | ||||    
T  35162 tgacaa 35167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 24779 - 24704
Alignment:
Q  73 ggcaatccggtgcactaaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcag 148  Q
    ||||||| |||||||| ||||||||| |||||||||| | || |||||| ||||| |||||||||||| |||||||    
T  24779 ggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcag 24704  T

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Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 234
Target Start/End: Complemental strand, 4258 - 4125
Alignment:
Q  106 agggaccgggaaggggttccaccattt---ggtgtattgtacgcagcc-taccctgt-ttttacactagagactgtttccagggcttaaacctgtaacct 200  Q
    |||| |||||||||||| |||||| ||   ||||||||||||||| || || ||||| |||||||| ||||  |||||||||| ||| |||| || ||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacct 4159  T
Q  201 tccagtcacatcacaacaattttaccagctgcgc 234  Q
    | ||||||||| ||||||| ||||| || |||||    
T  4158 ttcagtcacataacaacaactttactagttgcgc 4125  T

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Target: scaffold0167 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 23714 - 23590
Alignment:
Q  89 aaagctcccgcatacgcagggaccgggaaggggttccaccatttggtgtattgtacgcagcct-accctg-tttttacactagagactgtttccagggct 186  Q
    ||||||||| ||||| || || | |||||||||| |||||||||| |  |||||||||||||| |||||| ||||||||| ||||  ||||| || | ||    
T  23714 aaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagact 23615  T
Q  187 taaacctgtaaccttccagtcacat 211  Q
    | |||| ||| |||| |||||||||    
T  23614 tgaacccgtaccctttcagtcacat 23590  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 8938 - 8864
Alignment:
Q  155 ctgtttttacactagagactgtttccagggcttaaacctgtaaccttccagtcacatcacaacaattttaccagc 229  Q
    |||||||||||| |||   ||||||||||  || ||||||| ||||| ||||||||| ||||||| |||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccagc 8864  T

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