View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5087_high_6 (Length: 266)

Name: NF5087_high_6
Description: NF5087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5087_high_6
NF5087_high_6
[»] chr3 (71 HSPs)
chr3 (11-172)||(40461670-40461831)
chr3 (13-172)||(29776368-29776524)
chr3 (15-172)||(4019880-4020034)
chr3 (23-172)||(50520073-50520219)
chr3 (15-157)||(40797315-40797454)
chr3 (18-172)||(25939174-25939325)
chr3 (23-172)||(20200736-20200882)
chr3 (23-172)||(20202918-20203064)
chr3 (15-147)||(913019-913148)
chr3 (44-165)||(40365535-40365654)
chr3 (15-172)||(2598360-2598513)
chr3 (15-171)||(32089610-32089763)
chr3 (13-156)||(22286445-22286585)
chr3 (15-169)||(32237677-32237828)
chr3 (23-172)||(3088342-3088488)
chr3 (23-172)||(22844342-22844488)
chr3 (15-172)||(27831381-27831534)
chr3 (23-172)||(43839195-43839341)
chr3 (23-171)||(1165075-1165220)
chr3 (23-147)||(28995012-28995133)
chr3 (15-157)||(21586181-21586320)
chr3 (23-157)||(29182303-29182434)
chr3 (15-157)||(42106420-42106559)
chr3 (47-172)||(3457251-3457379)
chr3 (15-77)||(34767268-34767330)
chr3 (15-171)||(39340481-39340630)
chr3 (17-169)||(3312726-3312877)
chr3 (115-172)||(45664600-45664657)
chr3 (116-172)||(43030063-43030119)
chr3 (15-171)||(43243090-43243243)
chr3 (16-169)||(50460473-50460630)
chr3 (37-106)||(25373838-25373904)
chr3 (15-172)||(33076567-33076721)
chr3 (23-171)||(33977604-33977749)
chr3 (16-106)||(2148038-2148125)
chr3 (124-172)||(3961454-3961502)
chr3 (116-172)||(10977623-10977679)
chr3 (116-172)||(21803911-21803967)
chr3 (21-172)||(31462427-31462581)
chr3 (116-172)||(46926784-46926840)
chr3 (124-172)||(53155102-53155150)
chr3 (126-172)||(33637805-33637851)
chr3 (26-106)||(47587117-47587194)
chr3 (23-172)||(48401397-48401549)
chr3 (15-172)||(48652121-48652281)
chr3 (115-172)||(11846927-11846984)
chr3 (116-172)||(20252038-20252092)
chr3 (124-172)||(2192487-2192535)
chr3 (124-172)||(13701674-13701722)
chr3 (19-172)||(33794045-33794193)
chr3 (124-172)||(38379426-38379474)
chr3 (124-172)||(41598148-41598196)
chr3 (15-79)||(41868100-41868164)
chr3 (16-56)||(53427081-53427121)
chr3 (21-171)||(40883548-40883701)
chr3 (125-167)||(6894530-6894571)
chr3 (126-172)||(11819495-11819541)
chr3 (15-172)||(30155962-30156122)
chr3 (126-172)||(36691471-36691517)
chr3 (126-172)||(55090371-55090417)
chr3 (126-171)||(4082119-4082164)
chr3 (126-167)||(19860956-19860997)
chr3 (116-172)||(35501447-35501501)
chr3 (215-248)||(40461592-40461625)
chr3 (16-138)||(21084450-21084569)
chr3 (132-172)||(27189126-27189166)
chr3 (124-172)||(32080435-32080483)
chr3 (125-157)||(40401214-40401246)
chr3 (132-172)||(49627776-49627816)
chr3 (23-75)||(54240376-54240428)
chr3 (124-172)||(55446457-55446505)
[»] chr2 (78 HSPs)
chr2 (18-172)||(11931157-11931308)
chr2 (15-169)||(25622725-25622876)
chr2 (16-172)||(9715222-9715375)
chr2 (13-172)||(13268852-13269008)
chr2 (18-172)||(37883938-37884089)
chr2 (16-161)||(10589378-10589520)
chr2 (15-172)||(11798202-11798361)
chr2 (16-172)||(15920157-15920310)
chr2 (23-172)||(3465219-3465365)
chr2 (15-159)||(15673660-15673800)
chr2 (17-172)||(12366152-12366304)
chr2 (19-106)||(17056213-17056297)
chr2 (19-106)||(17068660-17068744)
chr2 (19-106)||(17095230-17095314)
chr2 (19-106)||(17118558-17118642)
chr2 (17-172)||(34480249-34480401)
chr2 (15-157)||(19580695-19580834)
chr2 (15-172)||(16720526-16720680)
chr2 (15-172)||(26491583-26491737)
chr2 (15-172)||(44441661-44441815)
chr2 (23-171)||(3603275-3603420)
chr2 (23-167)||(35353930-35354071)
chr2 (23-169)||(5071051-5071194)
chr2 (13-171)||(28228502-28228657)
chr2 (23-172)||(25771735-25771881)
chr2 (44-172)||(19953849-19953974)
chr2 (116-172)||(11550344-11550400)
chr2 (13-147)||(36508209-36508340)
chr2 (23-157)||(43928993-43929124)
chr2 (23-172)||(41177148-41177294)
chr2 (23-172)||(43567163-43567308)
chr2 (13-156)||(44167405-44167545)
chr2 (116-172)||(3390803-3390859)
chr2 (23-169)||(3397660-3397803)
chr2 (17-172)||(4878412-4878566)
chr2 (116-172)||(5930803-5930859)
chr2 (124-172)||(17792866-17792914)
chr2 (116-172)||(27191011-27191067)
chr2 (116-172)||(27840825-27840881)
chr2 (23-172)||(18141159-18141305)
chr2 (116-166)||(31125063-31125113)
chr2 (23-142)||(7640064-7640180)
chr2 (116-169)||(9207037-9207090)
chr2 (48-172)||(12890781-12890908)
chr2 (17-172)||(25237009-25237161)
chr2 (23-76)||(25516782-25516835)
chr2 (127-172)||(32314837-32314882)
chr2 (49-172)||(4739660-4739786)
chr2 (124-172)||(5172188-5172236)
chr2 (124-172)||(11937530-11937578)
chr2 (132-172)||(13548583-13548623)
chr2 (124-172)||(29543202-29543250)
chr2 (124-172)||(38384130-38384178)
chr2 (52-172)||(18089076-18089201)
chr2 (124-171)||(19904898-19904945)
chr2 (16-157)||(20036665-20036802)
chr2 (16-172)||(25068139-25068298)
chr2 (125-172)||(33012458-33012505)
chr2 (126-172)||(3527397-3527443)
chr2 (126-172)||(12705097-12705143)
chr2 (126-172)||(13878673-13878719)
chr2 (126-172)||(14018798-14018844)
chr2 (126-172)||(17267790-17267836)
chr2 (126-172)||(20560797-20560843)
chr2 (47-172)||(34471289-34471413)
chr2 (126-172)||(35333916-35333962)
chr2 (126-172)||(44942697-44942743)
chr2 (19-60)||(17074700-17074741)
chr2 (23-76)||(27191104-27191157)
chr2 (23-76)||(27840918-27840971)
chr2 (126-171)||(28261570-28261615)
chr2 (15-76)||(31262724-31262785)
chr2 (124-172)||(9689649-9689697)
chr2 (125-165)||(11580816-11580856)
chr2 (132-172)||(17054728-17054768)
chr2 (144-172)||(18056258-18056286)
chr2 (116-172)||(27023817-27023873)
chr2 (15-94)||(33852181-33852261)
[»] chr8 (65 HSPs)
chr8 (15-169)||(5989895-5990046)
chr8 (13-172)||(12243894-12244050)
chr8 (28-172)||(16937950-16938091)
chr8 (23-169)||(27534093-27534236)
chr8 (15-172)||(16937017-16937171)
chr8 (23-172)||(41996833-41996979)
chr8 (16-157)||(37720123-37720260)
chr8 (20-172)||(9799689-9799838)
chr8 (15-171)||(32778645-32778804)
chr8 (23-169)||(18190532-18190675)
chr8 (23-172)||(5457361-5457507)
chr8 (23-172)||(9992956-9993102)
chr8 (43-172)||(18994192-18994317)
chr8 (47-168)||(1215023-1215141)
chr8 (23-171)||(32104516-32104661)
chr8 (13-172)||(12248389-12248545)
chr8 (15-157)||(10043054-10043191)
chr8 (23-169)||(14530597-14530740)
chr8 (15-157)||(32256414-32256553)
chr8 (15-169)||(15665821-15665974)
chr8 (23-172)||(16996567-16996713)
chr8 (15-172)||(13977690-13977846)
chr8 (15-76)||(3028298-3028359)
chr8 (116-172)||(5328327-5328383)
chr8 (23-161)||(32062084-32062219)
chr8 (116-172)||(44295696-44295752)
chr8 (15-172)||(17019382-17019536)
chr8 (15-172)||(17549819-17549973)
chr8 (15-167)||(31147512-31147659)
chr8 (18-166)||(7269150-7269295)
chr8 (15-76)||(5917520-5917581)
chr8 (15-171)||(10148233-10148392)
chr8 (26-169)||(11298443-11298583)
chr8 (23-172)||(36545460-36545605)
chr8 (48-157)||(23970875-23970982)
chr8 (17-172)||(31712752-31712906)
chr8 (116-172)||(32413170-32413226)
chr8 (116-172)||(37659240-37659296)
chr8 (15-172)||(3925369-3925522)
chr8 (15-74)||(16809145-16809204)
chr8 (16-157)||(18196839-18196977)
chr8 (15-172)||(13575881-13576041)
chr8 (15-76)||(283776-283837)
chr8 (15-76)||(632040-632101)
chr8 (15-76)||(817852-817913)
chr8 (116-169)||(9270400-9270453)
chr8 (48-172)||(28296787-28296914)
chr8 (23-76)||(31874370-31874423)
chr8 (18-172)||(7280807-7280958)
chr8 (116-172)||(8054486-8054542)
chr8 (124-172)||(9501977-9502025)
chr8 (116-172)||(26538764-26538820)
chr8 (115-171)||(27989069-27989125)
chr8 (115-171)||(28046371-28046427)
chr8 (125-172)||(13570439-13570486)
chr8 (81-160)||(28298428-28298507)
chr8 (126-172)||(24790842-24790888)
chr8 (23-73)||(37129449-37129499)
chr8 (127-172)||(1809910-1809955)
chr8 (124-172)||(2234142-2234190)
chr8 (15-76)||(2629192-2629255)
chr8 (132-172)||(2968932-2968972)
chr8 (132-172)||(7579527-7579567)
chr8 (125-161)||(7763432-7763468)
chr8 (124-172)||(37613045-37613093)
[»] chr6 (39 HSPs)
chr6 (15-172)||(8644510-8644664)
chr6 (15-172)||(20496475-20496629)
chr6 (47-172)||(4921572-4921694)
chr6 (23-171)||(31748247-31748392)
chr6 (15-172)||(5416903-5417056)
chr6 (17-165)||(904552-904697)
chr6 (15-171)||(4663499-4663652)
chr6 (23-171)||(8632875-8633020)
chr6 (46-172)||(548550-548673)
chr6 (23-169)||(34020893-34021036)
chr6 (15-172)||(12653982-12654142)
chr6 (15-171)||(10744864-10745017)
chr6 (28-172)||(11426240-11426381)
chr6 (23-171)||(23843103-23843248)
chr6 (13-73)||(32804575-32804635)
chr6 (23-76)||(7049535-7049588)
chr6 (23-169)||(16913615-16913761)
chr6 (116-172)||(20845393-20845449)
chr6 (13-172)||(30813352-30813514)
chr6 (124-172)||(31705574-31705622)
chr6 (115-171)||(32458020-32458076)
chr6 (23-172)||(12576159-12576305)
chr6 (118-172)||(5545062-5545116)
chr6 (126-172)||(12481043-12481089)
chr6 (15-77)||(12651971-12652033)
chr6 (16-171)||(15127808-15127961)
chr6 (23-76)||(20845298-20845351)
chr6 (62-169)||(22530527-22530631)
chr6 (116-172)||(19760168-19760224)
chr6 (115-171)||(33197609-33197665)
chr6 (125-172)||(2304502-2304549)
chr6 (124-171)||(6295914-6295961)
chr6 (124-171)||(6302724-6302771)
chr6 (126-172)||(19402516-19402562)
chr6 (126-172)||(23654660-23654706)
chr6 (124-169)||(23637789-23637834)
chr6 (132-172)||(4660845-4660885)
chr6 (132-172)||(15589789-15589829)
chr6 (120-172)||(31804598-31804650)
[»] chr4 (80 HSPs)
chr4 (16-172)||(43157060-43157213)
chr4 (15-172)||(7242464-7242618)
chr4 (14-172)||(14346712-14346867)
chr4 (23-172)||(29474006-29474152)
chr4 (15-172)||(29576799-29576953)
chr4 (15-172)||(38434880-38435034)
chr4 (15-171)||(6082111-6082263)
chr4 (15-171)||(46775537-46775690)
chr4 (13-169)||(50981395-50981548)
chr4 (13-172)||(4622382-4622537)
chr4 (16-172)||(4959252-4959405)
chr4 (91-172)||(12519974-12520055)
chr4 (13-172)||(46728598-46728754)
chr4 (23-172)||(4634573-4634719)
chr4 (23-172)||(9662143-9662289)
chr4 (48-172)||(30416305-30416427)
chr4 (27-172)||(41486869-41487010)
chr4 (23-172)||(46716572-46716718)
chr4 (23-172)||(53903869-53904015)
chr4 (23-171)||(23002612-23002756)
chr4 (15-171)||(29589040-29589193)
chr4 (15-157)||(40861220-40861359)
chr4 (25-169)||(5388805-5388946)
chr4 (15-171)||(19885645-19885798)
chr4 (23-171)||(23067527-23067672)
chr4 (13-159)||(16992152-16992295)
chr4 (23-157)||(23926331-23926462)
chr4 (116-172)||(34668566-34668622)
chr4 (15-172)||(6408727-6408881)
chr4 (15-172)||(15729659-15729813)
chr4 (23-172)||(54420418-54420564)
chr4 (116-162)||(3169757-3169803)
chr4 (23-172)||(7083485-7083637)
chr4 (47-171)||(25658496-25658617)
chr4 (24-172)||(31311761-31311904)
chr4 (23-171)||(37869097-37869241)
chr4 (23-76)||(9549729-9549782)
chr4 (15-142)||(28990580-28990704)
chr4 (116-172)||(2945518-2945574)
chr4 (23-169)||(3673778-3673921)
chr4 (13-77)||(23963954-23964018)
chr4 (116-172)||(44374953-44375009)
chr4 (124-171)||(3159371-3159418)
chr4 (14-172)||(12716796-12716957)
chr4 (120-171)||(20961832-20961883)
chr4 (47-106)||(47704087-47704146)
chr4 (13-76)||(51646377-51646440)
chr4 (126-172)||(393938-393984)
chr4 (116-162)||(1645292-1645338)
chr4 (126-172)||(18502506-18502552)
chr4 (47-172)||(20887421-20887549)
chr4 (125-171)||(35338685-35338731)
chr4 (116-157)||(9474231-9474272)
chr4 (23-76)||(34115427-34115480)
chr4 (123-171)||(56250557-56250606)
chr4 (116-172)||(9549812-9549868)
chr4 (116-172)||(14542190-14542246)
chr4 (23-157)||(30469816-30469947)
chr4 (124-172)||(31932656-31932704)
chr4 (124-172)||(42197962-42198010)
chr4 (132-171)||(51958744-51958783)
chr4 (14-106)||(6789621-6789709)
chr4 (126-172)||(6882355-6882401)
chr4 (126-172)||(11209977-11210023)
chr4 (126-172)||(13965954-13966000)
chr4 (126-172)||(24100544-24100590)
chr4 (126-172)||(28837466-28837512)
chr4 (126-172)||(38943821-38943867)
chr4 (126-172)||(45350734-45350780)
chr4 (126-172)||(45360213-45360259)
chr4 (126-172)||(46268076-46268122)
chr4 (124-169)||(626226-626271)
chr4 (23-76)||(33020698-33020751)
chr4 (116-157)||(42972418-42972459)
chr4 (116-169)||(50002874-50002927)
chr4 (23-134)||(52555456-52555564)
chr4 (132-172)||(31522363-31522403)
chr4 (24-106)||(47466208-47466287)
chr4 (116-172)||(50274388-50274444)
chr4 (132-172)||(56236495-56236535)
[»] chr1 (62 HSPs)
chr1 (15-171)||(33177277-33177430)
chr1 (18-172)||(13969318-13969469)
chr1 (15-172)||(26771388-26771542)
chr1 (15-172)||(22031780-22031934)
chr1 (20-172)||(8893579-8893728)
chr1 (13-172)||(15276124-15276280)
chr1 (23-169)||(34566971-34567114)
chr1 (15-172)||(12147726-12147880)
chr1 (15-172)||(44513680-44513834)
chr1 (16-172)||(34659319-34659472)
chr1 (13-172)||(46589428-46589584)
chr1 (19-157)||(29067333-29067468)
chr1 (13-172)||(10877627-10877783)
chr1 (23-171)||(2350912-2351056)
chr1 (13-172)||(47392416-47392570)
chr1 (13-171)||(36621631-36621786)
chr1 (23-172)||(630462-630608)
chr1 (26-171)||(38644476-38644618)
chr1 (13-172)||(33703188-33703344)
chr1 (116-172)||(28213433-28213489)
chr1 (23-172)||(12967411-12967557)
chr1 (23-172)||(38646874-38647020)
chr1 (23-172)||(49652125-49652271)
chr1 (25-157)||(37662648-37662773)
chr1 (15-75)||(171302-171362)
chr1 (116-172)||(5844511-5844567)
chr1 (124-172)||(15790940-15790988)
chr1 (116-172)||(23257468-23257524)
chr1 (120-172)||(30853625-30853677)
chr1 (25-171)||(52839822-52839965)
chr1 (116-171)||(900431-900486)
chr1 (116-171)||(14716955-14717010)
chr1 (15-172)||(18343900-18344054)
chr1 (15-172)||(26199862-26200016)
chr1 (14-172)||(28677803-28677964)
chr1 (23-172)||(44562427-44562573)
chr1 (13-157)||(13691456-13691597)
chr1 (25-172)||(45659306-45659450)
chr1 (116-172)||(15698578-15698634)
chr1 (116-172)||(22344590-22344646)
chr1 (23-172)||(11121266-11121412)
chr1 (118-167)||(32538888-32538937)
chr1 (124-172)||(13999351-13999399)
chr1 (124-172)||(25032767-25032815)
chr1 (23-157)||(40992588-40992719)
chr1 (124-172)||(51418393-51418441)
chr1 (124-171)||(32784488-32784535)
chr1 (126-172)||(4882041-4882087)
chr1 (126-172)||(13488200-13488246)
chr1 (47-172)||(29205597-29205725)
chr1 (18-76)||(32878993-32879051)
chr1 (126-172)||(33486700-33486746)
chr1 (13-79)||(40488219-40488285)
chr1 (126-172)||(44517559-44517605)
chr1 (15-106)||(9298167-9298255)
chr1 (15-76)||(12871903-12871964)
chr1 (23-76)||(21326763-21326816)
chr1 (15-76)||(28399107-28399168)
chr1 (126-171)||(33938709-33938754)
chr1 (136-172)||(8758062-8758098)
chr1 (20-72)||(10599166-10599218)
chr1 (124-168)||(28399024-28399068)
[»] chr7 (70 HSPs)
chr7 (15-171)||(46918681-46918834)
chr7 (26-172)||(772736-772879)
chr7 (15-172)||(35362786-35362939)
chr7 (16-172)||(35141341-35141494)
chr7 (17-172)||(35134880-35135031)
chr7 (23-172)||(34893397-34893543)
chr7 (23-172)||(18753985-18754131)
chr7 (23-172)||(28015647-28015793)
chr7 (23-169)||(29804360-29804503)
chr7 (15-172)||(38649036-38649190)
chr7 (23-169)||(21328979-21329122)
chr7 (13-172)||(23732072-23732227)
chr7 (23-172)||(24470694-24470841)
chr7 (23-172)||(24475642-24475789)
chr7 (15-157)||(41748220-41748359)
chr7 (23-157)||(43483878-43484009)
chr7 (23-172)||(47156675-47156821)
chr7 (15-147)||(5024759-5024888)
chr7 (23-171)||(11002133-11002278)
chr7 (23-171)||(43806829-43806974)
chr7 (23-169)||(47750024-47750167)
chr7 (23-172)||(26017336-26017482)
chr7 (13-157)||(22379402-22379543)
chr7 (23-171)||(37399888-37400033)
chr7 (16-172)||(37890168-37890321)
chr7 (12-172)||(39090367-39090524)
chr7 (15-172)||(46025719-46025879)
chr7 (116-172)||(8319695-8319751)
chr7 (116-172)||(30992502-30992558)
chr7 (23-172)||(7986182-7986328)
chr7 (15-172)||(33530153-33530307)
chr7 (13-106)||(44681740-44681830)
chr7 (23-172)||(49167215-49167361)
chr7 (115-172)||(16273760-16273817)
chr7 (23-172)||(40775557-40775700)
chr7 (13-76)||(5684650-5684713)
chr7 (13-76)||(5709700-5709763)
chr7 (116-171)||(19895363-19895418)
chr7 (116-171)||(42491082-42491137)
chr7 (122-172)||(11833425-11833475)
chr7 (47-172)||(17508868-17508996)
chr7 (47-172)||(17544218-17544346)
chr7 (126-172)||(24319887-24319933)
chr7 (15-77)||(32312849-32312911)
chr7 (18-106)||(32944163-32944248)
chr7 (126-172)||(48304056-48304102)
chr7 (24-172)||(4621044-4621195)
chr7 (16-172)||(15123681-15123840)
chr7 (15-76)||(36350449-36350510)
chr7 (15-76)||(37375818-37375879)
chr7 (16-77)||(43098860-43098921)
chr7 (116-172)||(134823-134879)
chr7 (15-101)||(22751684-22751767)
chr7 (13-172)||(32741038-32741200)
chr7 (124-171)||(3266783-3266830)
chr7 (13-76)||(8611395-8611458)
chr7 (126-172)||(1280801-1280847)
chr7 (126-172)||(21991073-21991119)
chr7 (126-172)||(27535838-27535884)
chr7 (47-172)||(42644984-42645112)
chr7 (15-76)||(3266674-3266735)
chr7 (119-172)||(8611301-8611354)
chr7 (116-172)||(25854890-25854944)
chr7 (124-172)||(6667804-6667852)
chr7 (124-172)||(15017117-15017165)
chr7 (124-172)||(28664620-28664668)
chr7 (124-172)||(31254795-31254843)
chr7 (132-172)||(32312917-32312957)
chr7 (132-172)||(34871158-34871198)
chr7 (124-172)||(41288365-41288413)
[»] chr5 (57 HSPs)
chr5 (15-172)||(18472404-18472558)
chr5 (15-155)||(6647608-6647745)
chr5 (15-172)||(20270996-20271151)
chr5 (15-172)||(34866713-34866868)
chr5 (15-172)||(41554769-41554923)
chr5 (17-172)||(34844200-34844352)
chr5 (15-157)||(8811845-8811984)
chr5 (15-157)||(28500971-28501110)
chr5 (23-172)||(6886856-6887002)
chr5 (15-172)||(33486247-33486401)
chr5 (26-172)||(15710837-15710980)
chr5 (13-171)||(32387744-32387899)
chr5 (15-172)||(11734509-11734669)
chr5 (13-172)||(41358309-41358470)
chr5 (16-172)||(25770889-25771046)
chr5 (23-169)||(40564838-40564981)
chr5 (18-172)||(40775046-40775197)
chr5 (23-172)||(10923812-10923958)
chr5 (23-172)||(28618892-28619038)
chr5 (23-172)||(31646119-31646265)
chr5 (23-172)||(35906559-35906705)
chr5 (28-169)||(37219298-37219435)
chr5 (15-172)||(19645715-19645874)
chr5 (13-161)||(39591328-39591473)
chr5 (26-157)||(3495139-3495267)
chr5 (23-172)||(9034623-9034766)
chr5 (23-167)||(20145902-20146043)
chr5 (44-172)||(39308431-39308554)
chr5 (15-169)||(12524345-12524496)
chr5 (117-172)||(5378683-5378738)
chr5 (23-172)||(29154510-29154656)
chr5 (32-171)||(2415701-2415837)
chr5 (115-172)||(4070929-4070986)
chr5 (116-169)||(29310035-29310088)
chr5 (116-172)||(4726681-4726737)
chr5 (116-172)||(17218103-17218159)
chr5 (116-172)||(28423714-28423770)
chr5 (25-171)||(28662362-28662505)
chr5 (15-141)||(32390373-32390496)
chr5 (18-172)||(25962204-25962361)
chr5 (116-171)||(34874230-34874285)
chr5 (13-172)||(17325342-17325496)
chr5 (126-172)||(39179509-39179555)
chr5 (15-172)||(14910354-14910508)
chr5 (126-172)||(17331739-17331785)
chr5 (126-172)||(23881780-23881826)
chr5 (126-172)||(34431475-34431521)
chr5 (116-169)||(6074417-6074470)
chr5 (124-169)||(17095908-17095953)
chr5 (15-72)||(28388883-28388940)
chr5 (15-76)||(29098077-29098138)
chr5 (124-172)||(6281453-6281501)
chr5 (16-76)||(7151094-7151154)
chr5 (48-130)||(12439401-12439480)
chr5 (13-77)||(15710085-15710149)
chr5 (132-172)||(39531072-39531112)
chr5 (124-172)||(42781410-42781458)
[»] scaffold0157 (1 HSPs)
scaffold0157 (91-172)||(856-937)
[»] scaffold1294 (1 HSPs)
scaffold1294 (17-75)||(1059-1117)
[»] scaffold0432 (1 HSPs)
scaffold0432 (115-172)||(2112-2169)
[»] scaffold0056 (1 HSPs)
scaffold0056 (48-172)||(74494-74621)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-77)||(91174-91233)
[»] scaffold0316 (1 HSPs)
scaffold0316 (23-160)||(11893-12027)
[»] scaffold0722 (1 HSPs)
scaffold0722 (23-172)||(5204-5350)
[»] scaffold0150 (1 HSPs)
scaffold0150 (15-106)||(10073-10161)
[»] scaffold0045 (2 HSPs)
scaffold0045 (23-76)||(9429-9482)
scaffold0045 (116-157)||(48044-48085)
[»] scaffold0009 (1 HSPs)
scaffold0009 (116-169)||(105426-105479)
[»] scaffold1379 (1 HSPs)
scaffold1379 (13-130)||(789-907)
[»] scaffold0294 (1 HSPs)
scaffold0294 (126-172)||(3731-3777)
[»] scaffold0155 (1 HSPs)
scaffold0155 (126-172)||(35486-35532)
[»] scaffold0321 (1 HSPs)
scaffold0321 (124-172)||(6793-6842)
[»] scaffold0536 (1 HSPs)
scaffold0536 (132-172)||(3312-3352)
[»] scaffold0012 (1 HSPs)
scaffold0012 (124-172)||(245017-245065)
[»] scaffold0001 (1 HSPs)
scaffold0001 (124-172)||(403912-403960)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 40461831 - 40461670
Alignment:
Q  11 cacagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  40461831 cacagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgcttttaacatgatggatgttgtgactttgttcgcagattcaaaat 40461732  T
Q  111 tatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  40461731 tttcatttttagcgaatttgcattgtatcgatgtactttatcaatttgaataaattaatatc 40461670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 29776524 - 29776368
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||||||||||||||  || |||||||||||||||||| || |||||||||||| |   |||||||| |||| |||||||||||   ||     
T  29776524 cagagacttgaatatagtcatatgtgcaggcttttgtactttgtcgttttacgctattaacatggt---tgttgtgagtttgatcgcagattcatccttt 29776428  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29776427 ttgtttttatcgaatttgcattgtatcaatgtactctatcaatttgaataaatgaatatc 29776368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 4019880 - 4020034
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||||| || ||||||| ||| |||||||||||||| |||||||||||||||    ||||||||| |||||| |||||||||  ||| |     
T  4019880 gagacttgaatatagtaatctgtataggcttatgtactttgtcgttttatgctattaacatgg---atgttgtgagtttgtttgcagattcatcattttt 4019976  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||| |||||||||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  4019977 gttttttgcgaatttgcattgtatcgatgcactctatcaatttgaatgaatgaatatc 4020034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 50520073 - 50520219
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| |||||||||||||||    ||||||||| | ||||| ||||||||  ||| | ||||||||    
T  50520073 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatgg---atgttgtgagtctgttcacagattcatcatttttatttttag 50520169  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  50520170 cgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 50520219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 40797315 - 40797454
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat-gatgaatgttgtgactttgttcgcagattcaaaattat 113  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||| |||||||||||||| |||||    ||||| ||||||| ||||||||   || |    
T  40797315 gagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatagatga----tgtgagtttgttcacagattcatcctttt 40797410  T
Q  114 catttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    | |||||||||||||| ||||||||||||||||| |||||||||    
T  40797411 cgtttttagcgaattttcattgtatcgatgtactctatcaattt 40797454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 25939325 - 25939174
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    |||||||||||||||||||| ||| ||||||||||||  | |  |||||||| ||||||    ||||||||| |||||||| |||||||   || | |||    
T  25939325 acttgaatatagtcatatgtgtaggcttttgtactttaccatcttatgctatcaacatgg---atgttgtgaatttgttcgtagattcatcctttttatt 25939229  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  25939228 tttaatgaatttgcattgtatcgatgtactttatcaatttgaatgaatgaatatc 25939174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 20200882 - 20200736
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||| |||||||||||    ||||||||| | |||||||| |||||   || ||||||||||    
T  20200882 aatatagtcatatgtgtaggcatttgtactttgccgttttatactattaacatgg---atgttgtgagtctgttcgcatattcatccttttcatttttag 20200786  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||| |||| ||||||| ||||||||| ||| ||||||||||    
T  20200785 cgaatttgtattatatcaatgtactctatcaatttgaatgaatgaatatc 20200736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 20203064 - 20202918
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||| |||||||||||    ||||||||| | |||||||| |||||   || ||||||||||    
T  20203064 aatatagtcatatgtgtaggcatttgtactttgccgttttatactattaacatgg---atgttgtgagtctgttcgcatattcatccttttcatttttag 20202968  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||| |||| ||||||| ||||||||| ||| ||||||||||    
T  20202967 cgaatttgtattatatcaatgtactctatcaatttgaatgaatgaatatc 20202918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 913148 - 913019
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || ||    
T  913148 gagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaac---atggatgatgtgagtttgttcacagattcatccttttc 913052  T
Q  115 atttttagcgaatttgcattgtatcgatgtact 147  Q
     |||||||||||||| |||||||||||||||||    
T  913051 gtttttagcgaattttcattgtatcgatgtact 913019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 40365535 - 40365654
Alignment:
Q  44 ttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc-atttttagcgaatttgcattgtatcgat 142  Q
    ||||||||||||||||| |||||||||||||||    ||||||||| ||||||||||||| ||   || |  ||||||| ||||||||||||||||||||    
T  40365535 ttttgtactttgtcgttttatgctattaacatgg---atgttgtgagtttgttcgcagatgcatccttttttatttttaacgaatttgcattgtatcgat 40365631  T
Q  143 gtactttatcaatttaaataaat 165  Q
    ||||| ||||||||| |||||||    
T  40365632 gtactatatcaatttgaataaat 40365654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 2598360 - 2598513
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||| |||||||||||||||| ||| | |||||||||||||||  ||||||||||||   |||||| |||||| |||||| ||| |||||   || |     
T  2598360 gagactagaatatagtcatatgtgtaggcatttgtactttgtcgtgttatgctattaac---atgaatattgtgagtttgtttgcaaattcatccttttt 2598456  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||| | ||||| |||||||||||||||| ||||||||| |||| |||||||||    
T  2598457 gtttttag-ggatttgtattgtatcgatgtactatatcaatttgaatacatgaatatc 2598513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 32089763 - 32089610
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||| ||| |||||| |||| |   |||||||| ||||| | ||||||||   || |     
T  32089763 gagacttgaatatagtcacatgtgtaggcttttgtactttgtcgttttatactattatcatggt---tgttgtgagtttgtgcacagattcatcgttttt 32089667  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||| ||||||||||||||||  ||||||| ||||||||| | | |||||||||    
T  32089666 gtttttaacgaatttgcattgtattaatgtactctatcaatttgagtgaatgaatat 32089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 22286585 - 22286445
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||  |||     
T  22286585 cagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagcctgttcacagattcatcattt 22286489  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatt 156  Q
    |  ||||||||||||||||||| |||||||||||| | ||||||    
T  22286488 ttgtttttagcgaatttgcattatatcgatgtactctctcaatt 22286445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 32237828 - 32237677
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||| |||||| ||||||||||| ||| ||||||| |||||  ||| |||||||||||||||    ||||||||  ||||||||||||||||   |  |     
T  32237828 gagatttgaatttagtcatatgtgtaggcttttgtgctttgcagttttatgctattaacatgg---atgttgtgtgtttgttcgcagattcatcctcttt 32237732  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     || ||||||||||||||||||||||||||||| ||| ||||| ||| |||||||    
T  32237731 gttgttagcgaatttgcattgtatcgatgtactctattaatttgaatgaatgaat 32237677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 3088488 - 3088342
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||| ||| ||||||||||| |||    |||||||||   ||||| ||||||||  ||| |  |||||||    
T  3088488 aatatagtcatatgtgtaggcatttgtactttgttgttttatgctattaatatgg---atgttgtgagcctgttcacagattcatcatttttgtttttag 3088392  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | ||||||| ||| ||| ||||||    
T  3088391 cgaatttgcattatatcgatgtactctttcaatttgaatgaataaatatc 3088342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 22844342 - 22844488
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||  ||| |||| ||||||||||||| ||||||||||||   ||| ||||||||| ||||||| || ||||    || |  |||| ||    
T  22844342 aatatagtcatatgcgtaggctttagtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcacatattcgtcctttttgttttaag 22844438  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||||||| ||||||||  ||| ||||||||||    
T  22844439 cgaattttcattgtatcgatgtactctatcaattcgaatgaatgaatatc 22844488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 27831381 - 27831534
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||| |  ||| |||| ||| |||||||| ||||||||| ||||||||| |||||    ||||||||| ||||||||||||||||   || |     
T  27831381 gagacttgaatgtgatcacatgtgtagtcttttgtattttgtcgttttatgctattgacatgg---atgttgtgagtttgttcgcagattcattcttttt 27831477  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||   |||||||||||||||| ||||||||||||| ||| ||||||    
T  27831478 gtttttagcgaattaa-attgtatcgatgtactctatcaatttaaatgaataaatatc 27831534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 43839341 - 43839195
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||| |||||||| ||| | ||||||||||| |||| |||| ||||||||||    ||||||||| | ||||| ||||||||   || | ||||||||    
T  43839341 aatataatcatatgtgtaggcatttgtactttgccgttttatgatattaacatgg---atgttgtgagtctgttcacagattcattctttttatttttag 43839245  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | ||||| |||| |||||||||||| ||||||||| ||| ||||||||||    
T  43839244 caaatttacattatatcgatgtactctatcaatttgaatgaatgaatatc 43839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 1165220 - 1165075
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    ||| ||||| | ||||| || |||||   || |  |||||||    
T  1165220 aatatagtcatatgtgtagacaattgtactttgccgttttatgctattaacatgg---atgatgtgagtctgttcacatattcatcctttttgtttttag 1165124  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||||    
T  1165123 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatat 1165075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 28995133 - 28995012
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| ||||||||| |||||||  |||||||   || |  |||||||    
T  28995133 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcatagattcatcctttttgtttttag 28995037  T
Q  123 cgaatttgcattgtatcgatgtact 147  Q
    |||||||||||| ||||||||||||    
T  28995036 cgaatttgcattatatcgatgtact 28995012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 21586181 - 21586320
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||| ||||||||||| |||||| |||||||||||||||||  ||| ||||||||||||   ||  ||||||||| |||||||  | |||||   || |     
T  21586181 gagagttgaatatagtgatatgtgtagccttttgtactttgctgttttatgctattaac---atcgatgttgtgagtttgttcatatattcatccttttt 21586277  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||||||||||||||||||||| || |||||||| |||||    
T  21586278 gtttttagcgaatttgcattgtatctatttactttataaattt 21586320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 29182434 - 29182303
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||| |||||| || |||||||||||||||    |||||||||   |||||  |||||||  ||| | ||||||||    
T  29182434 aatatagtcatatgtgtaggcatttgtattttgtcattttatgctattaacatgg---atgttgtgagcctgttcatagattcatcatttttatttttag 29182338  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    | |||||||||| |||||||||||| |||||||||    
T  29182337 caaatttgcattatatcgatgtactctatcaattt 29182303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 42106420 - 42106559
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||| |||||||||| |||  ||| ||||| | ||||| |||||||||||||||    ||| ||||| ||||||| ||||||||   || ||    
T  42106420 gagacttaaatacagtcatatgtgtaggttttagtactctctcgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatccttttc 42106516  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||| ||||||| ||||||||||||||||| |||||||||    
T  42106517 gtttttaacgaattttcattgtatcgatgtactctatcaattt 42106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 3457251 - 3457379
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga------atttgcattgtatcg 140  Q
    |||||||||||||| ||||||||||||   ||| ||||||||| |||||||||| |||||  ||| |  ||||||||||      ||||| ||||||||     
T  3457251 tgtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcgcaaattcatcatttttgtttttagcgaatttggatttgtattgtatca 3457347  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||| ||||||||||    
T  3457348 atgtactctatcaatttaaatgaatgaatatc 3457379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 34767268 - 34767330
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  34767268 gagacttgaatatagtcttatgtgtaggcttttgtactttgccgttttatgctattaacatga 34767330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 39340481 - 39340630
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  |||| |||||||||||        ||||||||| |||||||||| |||||   || |     
T  39340481 gagacttgaatatagtcatatgtgtaggcttttatacttttccgttttatgctattaa-------gatgttgtgagtttgttcgcaaattcatccttttt 39340573  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     ||||||| ||||||||||||||||||| |||  ||||||||| ||  |||||||||    
T  39340574 gtttttagggaatttgcattgtatcgatataccctatcaatttgaaagaatgaatat 39340630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 3312726 - 3312877
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||||||||||||||||| | ||| | |  ||| |||| |||| |||||||||||||||    ||||||||||||||||| |||||||||  || |  |    
T  3312726 gacttgaatatagtcatatttgtaggcataggtattttgccgttttatgctattaacatgg---atgttgtgactttgttcacagattcaacctttttgt 3312822  T
Q  117 ttttagcgaatttg--cattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||| |||||||   |||||||||||||||| || |||||| ||| |||||||    
T  3312823 ttttagagaatttggatattgtatcgatgtactctaccaatttgaatgaatgaat 3312877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 45664600 - 45664657
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||    
T  45664600 atttttagcgaatttacattatatcgatgtactctatcaatttaaatgaatgaatatc 45664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 43030063 - 43030119
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  43030063 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 43030119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 43243090 - 43243243
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat-gatgaatgttgtgactttgttcgcagattcaaaattat 113  Q
    |||||||||| ||||| |||||| |||  ||||||| ||| ||||| ||||| |||||||| |||||    ||||| ||| |||||| |||||  ||| |    
T  43243090 gagacttgaaaatagttatatgtgtaggtttttgtattttttcgttttatgcaattaacatcgatga----tgtgagtttcttcgcatattcatcatttt 43243185  T
Q  114 catttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
      |||||||| |||||||||||||| ||||||||||||||| || ||| |||| ||||    
T  43243186 tgtttttagcaaatttgcattgtattgatgtactttatcaagttgaatgaatgcatat 43243243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 50460473 - 50460630
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||| |||| | ||||||||    ||||||||| |||||||||| |||||   || |      
T  50460473 agacttgaatatagtcatatgtgtaggcttttgtactttgttgttttatgttgttaacatgg---atgttgtgagtttgttcgcatattcatcctttttg 50460569  T
Q  116 tt-------tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||       |||||| |||||| |||| ||||||||||| | |||||||||||||||||||    
T  50460570 ttcttaacttttagcaaatttgaattgcatcgatgtactctgtcaatttaaataaatgaat 50460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 25373904 - 25373838
Alignment:
Q  37 tatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||| |||||||||||||||||| ||||||||||||   ||||||||||||| ||| ||||||||||||    
T  25373904 tataggcttttgtactttgtcgttttatgctattaac---atgaatgttgtgagttttttcgcagattca 25373838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 33076567 - 33076721
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||| |||||||||||||||||| | | | ||||||||||| |||| ||||||||||||   ||| || |||||| | ||||| || |||||   || |     
T  33076567 gagatttgaatatagtcatatgtgttggcatttgtactttgccgttttatgctattaac---atggatattgtgagtctgttcacatattcatccttttt 33076663  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||| ||||||||||   |||||||||||| ||||||||| ||| ||||||||||    
T  33076664 gtttttaacgaatttgcaccatatcgatgtactctatcaatttgaatgaatgaatatc 33076721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 33977749 - 33977604
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||||| |||||| ||| | ||||||||||| |||| |||| ||||||||||    ||||||||| | ||||  ||||||||   || |  ||||||     
T  33977749 aatatagttatatgtgtaggcatttgtactttgccgttttatgttattaacatgg---atgttgtgagtctgtttacagattcatcctttttgtttttaa 33977653  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| ||||||||||| || ||||||| ||| |||||||||    
T  33977652 cgaatttgcattttatcgatgtaccttttcaatttgaatgaatgaatat 33977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 2148038 - 2148125
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||||||||||||| | ||| | ||||||||||| |||| |||||||||||    ||| ||||||||| |||||||||| |||||    
T  2148038 agacttgaatatagtcatatttgtagacatttgtactttgccgttttatgctattaa---tatggatgttgtgagtttgttcgcaaattca 2148125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 3961502 - 3961454
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  3961502 gaatttgtattgtatcgatatactttatcaatttgaataaatgaatatc 3961454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 10977623 - 10977679
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||  |||||||||||| ||||||||| ||| ||||||||||    
T  10977623 tttttagcgaatttgcatgatatcgatgtactatatcaatttgaatgaatgaatatc 10977679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 21803911 - 21803967
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||| ||||||    
T  21803911 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaataaatatc 21803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 31462581 - 31462427
Alignment:
Q  21 tgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcattttt 120  Q
    |||||||| |||||| | ||| | | ||||||||| |||| ||| |||||||||||    ||||| ||| |||||||||| |||||  ||| |  |||||    
T  31462581 tgaatataatcatatttgtaggcatatgtactttgccgttttattctattaacatgg---atgttttgagtttgttcgcatattcatcatttttgttttt 31462485  T
Q  121 agcgaattt------gcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||      | |||||||||||||||||||||||||| ||| ||||||||||    
T  31462484 agcgaatttaaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 31462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 46926784 - 46926840
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||| ||||||    
T  46926784 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaataaatatc 46926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 53155150 - 53155102
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  53155150 gaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatc 53155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 33637805 - 33637851
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  33637805 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 33637851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 47587194 - 47587117
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||| | ||| ||||| |||| ||||||| ||||||||||||   ||||||| ||||| ||||||||||||||||    
T  47587194 atagtcatatttgtaggcttttatactctgtcgttttatgctattaac---atgaatgatgtgagtttgttcgcagattca 47587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 48401397 - 48401549
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| | | |||||||||  ||| |||||||||||||||    ||| ||||| ||||||| ||||||||   || | ||||||||    
T  48401397 aatatagtcatatttgtaggcatatgtactttgctgttatatgctattaacatgg---atgatgtgagtttgttcacagattcatcctttttatttttag 48401493  T
Q  123 cgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||      ||||||||||||| ||||||||| ||| ||||||||||    
T  48401494 cgaatttgaatttatattgtatcgatgtactctatcaatttgaatgaatgaatatc 48401549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 48652281 - 48652121
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | |  |||| |||  ||| |||||||||||||||    ||| ||||| ||||||| ||||||||   || |     
T  48652281 gagacttgaatatagtcatatttgtaggcataggtaccttgctgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatgcttttt 48652185  T
Q  115 atttttagcgaatttgca------ttgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||| |      ||||||||||||||||||||||||| ||| ||||||||||    
T  48652184 gtttttagcgaatttggagttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 48652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 11846927 - 11846984
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||| ||| |||||||| | ||||||| ||| ||||||||||    
T  11846927 atttttagcgaatttgcattttattgatgtactctgtcaatttgaatgaatgaatatc 11846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 20252038 - 20252092
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||  || |||||||||||||||||| ||| ||||||||||    
T  20252038 tttttagcgaatttgcatt--attgatgtactttatcaatttgaatgaatgaatatc 20252092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 2192487 - 2192535
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  2192487 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 2192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 13701722 - 13701674
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  13701722 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 13701674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 33794045 - 33794193
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcattt 118  Q
    ||||||||||||||| ||||  | |||| ||||||||  ||| |||| |||||||||||   |||||| || |||| |||||| |||||  || |  |||    
T  33794045 cttgaatatagtcatgtgta--ggctttcgtactttgctgttttatgttattaacatga---atgttgcgagtttgatcgcagcttcaacctttttgttt 33794139  T
Q  119 ttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||  ||| |||||||||||| || | || ||||||||| ||||||||||||||    
T  33794140 ttaaagaacttgcattgtatcaatttgctctatcaatttgaataaatgaatatc 33794193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 38379474 - 38379426
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||| ||||||||||||||||| ||||||| ||||||    
T  38379474 gaatttgtattgtatcaatgtactttatcaatttgaataaataaatatc 38379426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 41598196 - 41598148
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  41598196 gaatttgtatcgtattgatgtactatatcaatttaaataaatgaatatc 41598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 41868164 - 41868100
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatg 79  Q
    ||||||||||||||||||||| | ||| | |  |||||||| |||| ||||||||||||||||||    
T  41868164 gagacttgaatatagtcatatttgtagacataggtactttgccgttttatgctattaacatgatg 41868100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 53427081 - 53427121
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgt 56  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  53427081 agacttgaatatagtcatatgtgtaggcttttgtactttgt 53427121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 40883701 - 40883548
Alignment:
Q  21 tgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcattttt 120  Q
    ||||||||||||||| | ||| |||  ||||||||||||| ||||||||||||   | | ||| ||||| ||||||| ||||||||   || |  |||||    
T  40883701 tgaatatagtcatatttgtaggcttgggtactttgtcgttttatgctattaac---acggatgatgtgagtttgttcacagattcatcctttttgttttt 40883605  T
Q  121 agcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||      ||||| |||||||| ||||||| ||||||||| ||| |||||||||    
T  40883604 agcgaatttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatat 40883548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 6894571 - 6894530
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  6894571 aatttgtattgtatc-atgtactttatcaatttaaataaatga 6894530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 11819495 - 11819541
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  11819495 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 11819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 30156122 - 30155962
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||| ||||||||||||||| | ||| | | | |||||||||||| ||||||||||||   ||| ||||||||| ||||||| || ||||    || |     
T  30156122 gagacatgaatatagtcatatttgtaggcatatatactttgtcgttttatgctattaac---atggatgttgtgagtttgttcacatattcttccttttt 30156026  T
Q  115 atttttagcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||      ||||| |||||||||||||||| ||||||||| ||| ||||| ||||    
T  30156025 gtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatc 30155962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 36691517 - 36691471
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||||||||    
T  36691517 atttgtattgtatcgatgtactttatcgatttgaatgaatgaatatc 36691471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 55090417 - 55090371
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  55090417 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 55090371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 4082119 - 4082164
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  4082119 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 4082164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 19860997 - 19860956
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
    ||||||||||||||||||||||||||||| || ||| |||||    
T  19860997 atttgcattgtatcgatgtactttatcaacttgaatgaatga 19860956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 35501501 - 35501447
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||||||||||  ||||||||| ||||||||||| ||| ||||||||||    
T  35501501 tttttagcaaatttgcatt--atcgatgtattttatcaatttgaatgaatgaatatc 35501447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 40461625 - 40461592
Alignment:
Q  215 gctaaaaagacagttattttaagacggatagaat 248  Q
    |||||||||||||||||||| |||||||||||||    
T  40461625 gctaaaaagacagttattttgagacggatagaat 40461592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 21084569 - 21084450
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||| ||||||||||||||| |  || |||  ||| ||||||||| ||||||||||||||||   ||| | |||  |||||||||||||||  ||  |      
T  21084569 agacctgaatatagtcatatatgcaggcttaagtattttgtcgttttatgctattaacatga---atgatatgagattgttcgcagattcatcatctttg 21084473  T
Q  116 tttttagcgaatttgcattgtat 138  Q
    ||||||||||||||| |||||||    
T  21084472 tttttagcgaatttgtattgtat 21084450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 27189166 - 27189126
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  27189166 attgtatcaatgtactatatcaatttgaataaatgaatatc 27189126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 32080483 - 32080435
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| || |||||||    
T  32080483 gaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatc 32080435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 40401246 - 40401214
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||||||||||||||||||| |||||||||    
T  40401246 aatttgcattgtatcgatgtactatatcaattt 40401214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 49627816 - 49627776
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  49627816 attgtatcgatgtactctatcaatttgaatgaatgaatatc 49627776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 54240376 - 54240428
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat 75  Q
    ||||||||||||||| ||| | |||||| ||||||||| ||| ||||||||||    
T  54240376 aatatagtcatatgtgtaggcatttgtattttgtcgttttatactattaacat 54240428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 55446457 - 55446505
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||| | ||||||| ||| ||||||||||    
T  55446457 gaatttgcattgtatcgatatactctgtcaatttgaatgaatgaatatc 55446505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 11931157 - 11931308
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||    ||||||||| ||||||||||||||||   || | |||    
T  11931157 acttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcgcagattcattctttttatt 11931253  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  11931254 tttagcgaatttgcattatatcgatgtactttatcaatttgaatgaatgaatatc 11931308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 25622876 - 25622725
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||    ||||||||| |||||||||| |||||   || |     
T  25622876 gagactttaatatagtcatatgtgtaggcttttgtactttgacgttttatgctattaacatgg---atgttgtgagtttgttcgcatattcatccttttt 25622780  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  25622779 gtttttagcgaatttacattgtatcgatgtactctatcaatttaaatgaatgaat 25622725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 9715375 - 9715222
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||||||||||||| | || ||| |||||||||||||||||| |||| ||||||||  | || |||||||| |||||||| |||||||   || |      
T  9715375 agacttgaatatagtcaaacgtgtaggcttttgtactttgtcgttatatgttattaaca--aaga-tgttgtgagtttgttcgtagattcatcctttttg 9715279  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  9715278 tttttagcgaatttgcattgtatcggtgtactctatcaatttgaataaatgaatatc 9715222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 13268852 - 13269008
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||||||||| |||| ||  |||||||||||||  ||| |||| ||||||||||    ||||| ||| |||||||| |||||||  |||     
T  13268852 cagagacttgaatatagtcacatgtgtaagcttttgtactttgctgttttatgatattaacatgg---atgttatgagtttgttcgtagattcatcattt 13268948  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  13268949 ttgtttttagcgaatttgcattgtatcaatgtactctatcaatttgaatgaatgaatatc 13269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 37883938 - 37884089
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    |||| ||||||||||||||| ||| |||| |||||||| |||| |||||||||||||||    ||| ||||| ||||||| ||||||||  ||| |  ||    
T  37883938 acttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatcatttttgtt 37884034  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||| |||||||| ||||||||| ||| ||||||||||    
T  37884035 tttagcgaattttcattgtattgatgtactatatcaatttgaatgaatgaatatc 37884089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 10589378 - 10589520
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||| ||||||||||||||||||| ||||  ||||||| |||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || ||     
T  10589378 agacttaaatatagtcatatgtataggctttaatactttgccgttttatgctattaac---atggatgatgtgagtttgttcacagattcatctttttcg 10589474  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaat 161  Q
    ||||||||| |||| |||||||||||| |||| |||||||||||||    
T  10589475 tttttagcggattttcattgtatcgatatactctatcaatttaaat 10589520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 11798361 - 11798202
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | |  ||||||||||||| ||||||||||||   ||| ||||||||| ||||||||||||||| |  || |     
T  11798361 gagacttgaatatagtcatatttgtaggcataggtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcgcagattc-atcttttt 11798266  T
Q  115 atttttagc------gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||      ||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  11798265 atttttagcgactttgaatttgaattgtatcgatgtactctatcaatttaaatgaatgaatatc 11798202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 15920157 - 15920310
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||||||||||||||||| | ||| | | ||||||||| |||| ||||||||||||||  ||| ||||| || ||||||| ||||||||   || |      
T  15920157 agacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacat--tga-tgttgcgagtttgttcacagattcatcttttttg 15920253  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  15920254 tttttagtgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 15920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 3465219 - 3465365
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| |||||||||||||||    |||||||||  |||||| |||||| |   || | ||||||||    
T  3465219 aatatagtcatatgtgtagacatttgtactttgtcgttttatgctattaacatgg---atgttgtgagcttgttcacagatttatcctttttatttttag 3465315  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||||||| |||||||||||| | ||||||| ||| |||| |||||    
T  3465316 caaatttgcattatatcgatgtactctttcaatttgaatgaatggatatc 3465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 15673800 - 15673660
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| ||| |||| |||| |||||||||||||||    ||||||||| ||||||  ||||||||   || |     
T  15673800 gagacttaaatatagtcatatgtgtaggctttagtattttgccgttttatgctattaacatgg---atgttgtgagtttgttt-cagattcatccttttt 15673705  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaa 159  Q
     |||||||||||||| ||||||||||||||||| |||||||||||    
T  15673704 gtttttagcgaattttcattgtatcgatgtactctatcaatttaa 15673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 12366152 - 12366304
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||| ||||| ||||||||| ||| |||| ||||||| ||||| |||||||||||||||    |||||| ||  |||||| || |||||   || |  |    
T  12366152 gacttaaatattgtcatatgtgtaggctttagtactttttcgttttatgctattaacatgg---atgttgagaggttgttcacatattcatcctttttgt 12366248  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||    
T  12366249 ttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaatatc 12366304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 17056297 - 17056213
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||   ||||||||||||| |||||||| |||||||    
T  17056297 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaac---atgaatgttgtgagtttgttcgtagattca 17056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 17068744 - 17068660
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||   ||||||||||||| |||||||| |||||||    
T  17068744 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaac---atgaatgttgtgagtttgttcgtagattca 17068660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 17095314 - 17095230
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||   ||||||||||||| |||||||| |||||||    
T  17095314 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaac---atgaatgttgtgagtttgttcgtagattca 17095230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 17118642 - 17118558
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||   ||||||||||||| |||||||| |||||||    
T  17118642 cttgaatatagtcatatgtgtaggcgtttgtactttgtcgttttatgctattaac---atgaatgttgtgagtttgttcgtagattca 17118558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 34480249 - 34480401
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||||||||||||||||||| |||  ||||||||||||||||| ||| ||||||||   ||| ||||||||| |||||||||| |||||   || |  |    
T  34480249 gacttgaatatagtcatatgtgtaggtttttgtactttgtcgttttattctattaac---atggatgttgtgagtttgttcgcatattcatcctttttgt 34480345  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||| |||||| ||||||| || |||||| ||||||||| ||  ||||||||||    
T  34480346 tcttagtgaatttacattgtaccggtgtactctatcaatttgaacgaatgaatatc 34480401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 19580834 - 19580695
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||| |||||| | ||| |||| ||||||||  ||| |||||||||||||||    ||||||||| ||||||| |||||||||| || |     
T  19580834 gagacttaaatataatcatatctgtagactttagtactttgcagttttatgctattaacatgg---atgttgtgagtttgttcacagattcaaacttttt 19580738  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||||| ||||| ||||||||||||| ||| |||||||||    
T  19580737 gtttttagcaaattttcattgtatcgatgcactctatcaattt 19580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 16720680 - 16720526
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| | ||||||||||||| || ||||||||||||   ||| ||| ||||| | ||||| || |||||   || |     
T  16720680 gagacttaaatatagtcatatgtgtaggcatttgtactttgtcattttatgctattaac---atggatgatgtgagtctgttcacaaattcatccttttt 16720584  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||| |||||||||| ||||| |||| | |||||||||| || ||||||||||    
T  16720583 atttttagcaaatttgcattatatcgttgtattatatcaatttacatgaatgaatatc 16720526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 26491583 - 26491737
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||  ||| |||||||||||   |||||   || ||||||| || |||||   || |     
T  26491583 gagacttaaatatagtcatatgtgtaggctttagtactttgtcgtgttatactattaacatggataatgt---gagtttgttcacaaattcatccttttt 26491679  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||| ||||||||||||||| | ||||||||| ||| ||||||||||    
T  26491680 gtttttagcgaattttcattgtatcgatgtattctatcaatttgaatgaatgaatatc 26491737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 44441661 - 44441815
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| | | ||||||||||||| |||| || ||||||||||||    ||| | ||| ||||||||||||||||    | |     
T  44441661 gagacttgaatatagtcatatgtgtggacttttgtactttgccgttttaagctattaacatgg---atgctatgagtttgttcgcagattcatccctttt 44441757  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||||| |||||| ||||| | ||||||||| ||| ||| ||||||    
T  44441758 gtttttagcgaatttgcaatgtatcaatgtattctatcaatttgaatcaataaatatc 44441815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 3603275 - 3603420
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||   || |  |||||||    
T  3603275 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagcctgttcacagattcatcctttttgtttttag 3603371  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||| ||||| ||| ||||| ||| |||||||||    
T  3603372 cgaatttgcattatatcgaagtactatataaatttgaatgaatgaatat 3603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 35353930 - 35354071
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||   ||| ||||||||| ||||||| ||  ||||   || |  |||||||    
T  35353930 aatatagtcatatttataggcttatgtactttgttgttttatgctattaac---atggatgttgtgagtttgttcacatgttcatcctttttgtttttag 35354026  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
    |||||||| |||| ||||||||||| ||||||||| ||| |||||    
T  35354027 cgaatttgtattgcatcgatgtactctatcaatttgaatgaatga 35354071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 5071194 - 5071051
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| |||| | || |||| |||||||||||||||    ||||||||| ||||||||||||||||   || |  || ||||    
T  5071194 aatatagtcatatttgtaggcttatgtattatgccgttttatgctattaacatgg---atgttgtgagtttgttcgcagattcatcctttttgttattag 5071098  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  5071097 cgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 5071051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 28228502 - 28228657
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||| ||||||||||||||||||| ||| ||||| |||||||||||  |||||||||    | ||| ||||||||| |||||| ||| ||| |   ||     
T  28228502 cagaggcttgaatatagtcatatgtgtaggcttttttactttgtcgtattatgctatt---gttatggatgttgtgagtttgttagcaaattaatctttt 28228598  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |  ||||||| ||||||||||| ||||||||| || ||||||||| ||| |||||||||    
T  28228599 ttgtttttagtgaatttgcattatatcgatgttctctatcaatttgaatgaatgaatat 28228657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 25771735 - 25771881
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    ||| |||||   ||||| || |||||   || |  |||||||    
T  25771735 aatatagtcatatgtgtagacaattgtactttgccgttttatgctattaacatgg---atgatgtgagcctgttcacatattcatcctttttgtttttag 25771831  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  25771832 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 25771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 19953849 - 19953974
Alignment:
Q  44 ttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatg 143  Q
    |||||||||||| |||| || ||||||||||||    ||||| ||| |||||||| |||||||  ||| |  ||||||||||||||||||||||| |||     
T  19953849 ttttgtactttgccgttttaggctattaacatgg---atgttatgagtttgttcggagattcatcatttttgtttttagcgaatttgcattgtatagata 19953945  T
Q  144 tactttatcaatttaaataaatgaatatc 172  Q
    |||| ||||||||| ||  ||||||||||    
T  19953946 tactctatcaatttgaaagaatgaatatc 19953974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 11550400 - 11550344
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  11550400 tttttagcgaatttgcattgtattgatgtactctatcaatttgaatgaatgaatatc 11550344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 36508209 - 36508340
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||   ||     
T  36508209 cagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgaacctgttcacagattcatccttt 36508305  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtact 147  Q
    |   |||||||||||||||||| ||||||||||||    
T  36508306 ttgcttttagcgaatttgcattatatcgatgtact 36508340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 43929124 - 43928993
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    ||||||||| | ||||| || |||||   || |  |||||||    
T  43929124 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatgg---atgttgtgagtctgttcacaaattcatcctttttgtttttag 43929028  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||| |||| ||||||||||||| ||||||||    
T  43929027 cgaatttacattatatcgatgtacttgatcaattt 43928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 41177148 - 41177294
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||| |||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||   || |  ||||||     
T  41177148 aatatattcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagcctgttcacagattcatcctttttgtttttaa 41177244  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||||||| |||| | ||||||| ||| ||||||||||    
T  41177245 cgaatttgcattatatcgatttactctttcaatttgaatgaatgaatatc 41177294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 43567163 - 43567308
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||   || |  |||||||    
T  43567163 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagcctgttcacagattcatcctt-ttgtttttag 43567258  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||| | ||| |||||||| | ||||||| ||| ||||||||||    
T  43567259 cgaatttgcaatatattgatgtactctttcaatttgaatgaatgaatatc 43567308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 44167545 - 44167405
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| ||| |||||   ||||| |||||| |   ||     
T  44167545 cagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgatgtgagcctgttcacagatttatccttt 44167449  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatt 156  Q
    |  ||||||||||||||||||| |||||||||||| | ||||||    
T  44167448 ttgtttttagcgaatttgcattatatcgatgtactctttcaatt 44167405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 3390803 - 3390859
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  3390803 tttttagcaaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 3390859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 3397803 - 3397660
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||  ||| |||||||||||||| ||||||||||||||| |   |||||||| ||||||| || |||||   || |  ||||||     
T  3397803 aatatagtcatatttgtatgcttatgtactttgtcgttttatgctattaacatggt---tgttgtgagtttgttcacaaattcatcctttttgtttttaa 3397707  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     ||||||| |||| ||| ||||||| ||||||||| ||| |||||||    
T  3397706 agaatttgtattgcatcaatgtactctatcaatttgaatgaatgaat 3397660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 4878566 - 4878412
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||| ||||||||||||||| ||| |||| ||||||   |||| |||| ||||||||||    ||| ||||| ||||||| || |||||   || |  |    
T  4878566 gacttaaatatagtcatatgtgtaggctttagtacttgaccgttttatgttattaacatgg---atgctgtgagtttgttcacatattcatcctttttgt 4878470  T
Q  117 ttttagcgaatttgcattgtat--cgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  4878469 ttttagcgaattttcattgtatatcgatgtactctatcaatttgaatgaatgaatatc 4878412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 5930803 - 5930859
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||| |||| |||| ||||||| ||||||||| ||||||||||||||    
T  5930803 tttttagcgaatttacattatatcaatgtactctatcaatttgaataaatgaatatc 5930859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 17792866 - 17792914
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  17792866 gaatttgtattgtatcgatgtactttatcaatttgaattaatgaatatc 17792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 27191067 - 27191011
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  27191067 tttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 27191011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 27840881 - 27840825
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  27840881 tttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 27840825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 18141305 - 18141159
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| ||  ||||   |||||  |||||| |  ||| |  |||||||    
T  18141305 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatactgtgggcttgtttacagattaatcatttttgtttttag 18141209  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | ||||||||||  ||||||||||| ||||||||| ||| ||||||||||    
T  18141208 caaatttgcattacatcgatgtactctatcaatttgaatgaatgaatatc 18141159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 31125113 - 31125063
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatg 166  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| ||||||||    
T  31125113 tttttagcgaatttgtattgcatcaatgtactttatcaatttgaataaatg 31125063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 7640180 - 7640064
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| ||||||||||||   ||| |||||||||   ||||| ||||||||   || |  |||||||    
T  7640180 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaac---atggatgttgtgagcctgttcacagattcattctttttgtttttag 7640084  T
Q  123 cgaatttgcattgtatcgat 142  Q
    |||||||||||| |||||||    
T  7640083 cgaatttgcattttatcgat 7640064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 9207090 - 9207037
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||||||||| |||||||||||| |||||||| |||| |||||||    
T  9207090 tttttagcaaatttgcattatatcgatgtactctatcaattcaaatgaatgaat 9207037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 12890908 - 12890781
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcga 141  Q
    |||||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||| |||      |||||||    
T  12890908 gtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcga 12890812  T
Q  142 tgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||| ||| ||||||||||    
T  12890811 tgtactctatcaatttgaattaatgaatatc 12890781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 25237161 - 25237009
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||| |||||| |||||||| ||| ||||| || |||| |||| |||| ||||||||||    ||||||||| ||||||| |||||| |    | |       
T  25237161 gacttaaatataatcatatgtgtaggcttttctattttgccgttttatgttattaacatgg---atgttgtgagtttgttcccagatttatccatttacg 25237065  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||| |||| ||||||||| ||| || |||||||    
T  25237064 ttttaacgaatttgcattgtatcgatatactctatcaatttgaatgaaagaatatc 25237009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 25516782 - 25516835
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  25516782 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatg 25516835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 32314837 - 32314882
Alignment:
Q  127 tttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||    
T  32314837 tttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 32314882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 4739660 - 4739786
Alignment:
Q  49 tactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcgat 142  Q
    |||||||| ||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||| |||      ||||||||    
T  4739660 tactttgttgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgat 4739756  T
Q  143 gtactttatcaatttaaataaatgaatatc 172  Q
    ||||| ||||||||| ||| ||||||||||    
T  4739757 gtactctatcaatttgaatgaatgaatatc 4739786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 5172188 - 5172236
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  5172188 gaatttgtattgtatcgatatactttatcaacttgaataaatgaatatc 5172236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 11937578 - 11937530
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| |||||||||  |||||||||||||    
T  11937578 gaatttgtattgtatcgatgtactctatcaatttggataaatgaatatc 11937530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 13548623 - 13548583
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  13548623 attgtatcgatgtactatatcaatttaaatgaatgaatatc 13548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 29543202 - 29543250
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  29543202 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 29543250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 38384178 - 38384130
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||| |||||||||||| ||| ||||||||||    
T  38384178 gaatttgtattgtatcgatgtgctttatcaatttgaatgaatgaatatc 38384130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 18089201 - 18089076
Alignment:
Q  52 tttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcgatgta 145  Q
    |||| |||| ||||||||||| ||| || ||||||||| ||||||| ||||||||   || |  ||||||||||||||| |||      |||||||||||    
T  18089201 tttgccgttttatgctattaatatg-tggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgta 18089103  T
Q  146 ctttatcaatttaaataaatgaatatc 172  Q
    || ||||||||| ||| ||||||||||    
T  18089102 ctatatcaatttgaatgaatgaatatc 18089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 19904898 - 19904945
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| ||| |||||||||||| ||||||||||||| |||||||||    
T  19904898 gaatttgtattatatcgatgtactatatcaatttaaatgaatgaatat 19904945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 20036665 - 20036802
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||| ||||||||  |||| ||| ||| ||||||||  |||| ||||||||||||   ||| ||||||||| ||| ||| | ||||||   || ||     
T  20036665 agacttggatatagtctaatgtgtaggcttctgtactttaccgttttatgctattaac---atggatgttgtgagtttattctcggattcatccttttct 20036761  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||| ||||||||| |||||| ||||| |||||||||||    
T  20036762 tttttagagaatttgcagtgtatc-atgtagtttatcaattt 20036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 25068139 - 25068298
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaaca-tgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||||||||| | ||| | |  |||| ||| |||| ||||||||||||| ||||||    ||||| ||||||| ||||||||   || |     
T  25068139 agacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgctattaacactgatga----tgtgagtttgttcacagattcatccttttt 25068234  T
Q  115 atttttagcgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||| |||      ||||||||||||| ||||||||| ||| ||||||||||    
T  25068235 gtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 25068298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 33012458 - 33012505
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  33012458 aatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 33012505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 3527397 - 3527443
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  3527397 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 3527443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 12705097 - 12705143
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  12705097 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 12705143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13878719 - 13878673
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  13878719 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 13878673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 14018844 - 14018798
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  14018844 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 14018798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 17267836 - 17267790
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||| ||||||| ||||||||| ||||||||||||||    
T  17267836 atttgtattgtatcaatgtactctatcaatttgaataaatgaatatc 17267790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 20560843 - 20560797
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  20560843 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 20560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 34471289 - 34471413
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga--atttgcattgtatcgatgt 144  Q
    |||| |||| |||| |||||||||||||||    ||||||||| ||||||| || |||||  ||| |  ||||||||||  ||||| |||||||||||||    
T  34471289 tgtattttgccgttttatgctattaacatgg---atgttgtgagtttgttcacatattcatcatttttgtttttagcgaggatttgtattgtatcgatgt 34471385  T
Q  145 actttatcaatttaaataaatgaatatc 172  Q
    |||  |||||||| ||| |||| |||||    
T  34471386 actccatcaatttgaatgaatgtatatc 34471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 35333916 - 35333962
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  35333916 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 35333962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 44942697 - 44942743
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  44942697 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 44942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 17074741 - 17074700
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgtt 60  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||    
T  17074741 cttgaatatagtcatatgtgtagacttttgtactttgccgtt 17074700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 27191157 - 27191104
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||||||  |||| |||||||||||||||    
T  27191157 aatatagtcatatgtgtaggcatttgtactttaccgttttatgctattaacatg 27191104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 27840971 - 27840918
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||||||  |||| |||||||||||||||    
T  27840971 aatatagtcatatgtgtaggcatttgtactttaccgttttatgctattaacatg 27840918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 28261615 - 28261570
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  28261615 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 28261570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 31262785 - 31262724
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||| | | ||| || |||||||||||||||  ||| ||||||||||    
T  31262785 gagacttgaatatagtcatgtttgtagactattgtactttgtcgtttaatgttattaacatg 31262724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 9689697 - 9689649
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||| |||||||||||| ||||||||||||| |||| |||||    
T  9689697 gaatttgtattatatcgatgtactctatcaatttaaatgaatgtatatc 9689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 11580856 - 11580816
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaat 165  Q
    |||||| ||||||||||||||||  ||||||||||||||||    
T  11580856 aatttgtattgtatcgatgtactcaatcaatttaaataaat 11580816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 17054768 - 17054728
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  17054768 attgtatcggtgtaatatatcaatttaaataaatgaatatc 17054728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 18056286 - 18056258
Alignment:
Q  144 tactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||||||||||||    
T  18056286 tactttatcaatttaaataaatgaatatc 18056258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 27023873 - 27023817
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| ||| |||||||||||| |||| |||| ||| ||| ||||||    
T  27023873 tttttagcgaatttgtattatatcgatgtactctatcgatttgaatgaataaatatc 27023817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33852181 - 33852261
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg-atgaatgttgtgactttg 94  Q
    |||||||||||||| || ||| | |||  || |||||||| ||||| ||||||||||||||| ||||||| ||||| ||||    
T  33852181 gagacttgaatatattcgtatttgtagatttatgtactttatcgttttatgctattaacatgaatgaatgatgtgagtttg 33852261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 5989895 - 5990046
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||   |||||| |||||| ||||||||||||||||  ||| |     
T  5989895 gagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaac---atgaatattgtgagtttgttcgcagattcatcattttt 5989991  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     ||||||||||||||||||| ||| |||||||| ||| ||||||||| |||||||    
T  5989992 gtttttagcgaatttgcattctattgatgtactatattaatttaaatgaatgaat 5990046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 12244050 - 12243894
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||| |||| |||||||   ||| ||||||||| ||||||||||||||||   ||     
T  12244050 cagagacttgaatatagttatatgtgtaggcttttgtactttgtcgttttatgttattaac---atggatgttgtgagtttgttcgcagattcatccttt 12243954  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||||| ||||||||||| |||||||||||| ||||| ||| ||  ||||||||||    
T  12243953 ttatttttagtgaatttgcattatatcgatgtactctatcagtttgaacgaatgaatatc 12243894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 16938091 - 16937950
Alignment:
Q  28 agtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaat 127  Q
    |||||||||| ||| |||||||||||||| ||| |||| ||||||||||    ||  ||||| ||||||||||||||||   || |  ||||||||||||    
T  16938091 agtcatatgtgtaggcttttgtactttgttgttttatggtattaacatgg---attctgtgagtttgttcgcagattcatgctttttgtttttagcgaat 16937995  T
Q  128 ttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  16937994 ttgcattgtatcgatgtactctatcaatttaaatgaatgaatatc 16937950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 27534236 - 27534093
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||| |||| ||||||||||||||||   ||||||||| ||||||| ||||||||   || | ||||||||    
T  27534236 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatga---atgttgtgagtttgttcacagattcatcctttttatttttag 27534140  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     ||||||| |||| ||||||||||| | |||||||||||||||||||    
T  27534139 tgaatttgtattgcatcgatgtactctttcaatttaaataaatgaat 27534093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 16937171 - 16937017
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||| ||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || |     
T  16937171 gagacttaaatatagtcatatgtgtaggctttagtactttgttgttttatgctattaac---atggatgatgtgagtttgttcacagattcatccttttt 16937075  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| ||||||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  16937074 attttaagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 16937017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 41996833 - 41996979
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| |||||||| |||||||||||||||    ||||||||| | ||||| ||||||||   || |  |||||||    
T  41996833 aatatagtcatatgtgtaggcatttgtaccttgtcgttttatgctattaacatgg---atgttgtgagtctgttcacagattcatcctttttgtttttag 41996929  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  41996930 cgaatttgcattatatcgatgtactcgatcaatttaaatgaatgaatatc 41996979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 37720123 - 37720260
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||    ||| ||| || || |||||||| |||||||   || | |    
T  37720123 agacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaa---tatggatgctgcgagtttgttcggagattcatccttttta 37720219  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||||||||||| ||||| ||||||||||| |||||||||    
T  37720220 tttttagcgaatttacattg-atcgatgtactctatcaattt 37720260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 9799838 - 9799689
Alignment:
Q  20 ttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttt 119  Q
    |||||||||||||||||| ||| ||||||||| || | ||| ||||||||||||   ||| ||||||||| |||||||||| ||||    || |  ||||    
T  9799838 ttgaatatagtcatatgtgtaggcttttgtacgttttagttttatgctattaac---atggatgttgtgagtttgttcgcatattcctcttttttgtttt 9799742  T
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||| | ||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  9799741 tagagcatttgcattgtattgatgtactctatcaatttgaatgaatgaatatc 9799689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 32778804 - 32778645
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||||| |  |||||||| |||| ||||||||||| ||| |   |||||||| |||||||||| |||||  ||| |     
T  32778804 gagacttgaatatagtcatatttgtagccataggtactttgccgttttatgctattaatatggt---tgttgtgagtttgttcgcaaattcatcattttt 32778708  T
Q  115 atttttagcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     ||||||||||      ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  32778707 gtttttagcgactttggatttgaattgtatcgatgtactctatcaatttgaataaatgaatat 32778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 18190675 - 18190532
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| |||||||||||||| ||||||||||| |||    ||||||||| ||||||| ||||||||   || |  |||||||    
T  18190675 aatatagtcatatttgtaggcttgtgtactttgtcgttttatgctattaatatgg---atgttgtgagtttgttcacagattcattctttttgtttttag 18190579  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||| ||||||||||| ||| ||||| ||| |||||||    
T  18190578 cgaatttgtattgcatcgatgtactctattaatttgaatgaatgaat 18190532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 5457361 - 5457507
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||||| ||||||| |||||||| |||||||||| |   |||  ||||||||   ||||| ||||||||  ||| |  |||||||    
T  5457361 aatatagtcatatgtgtagccatttgtaccttgtcgttttatgctattagc---atgggtgttgtgagcatgttcacagattcatcatttttgtttttag 5457457  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||  ||| |||||||||||| ||||||||| ||| ||||||||||    
T  5457458 cgaatttatattatatcgatgtactctatcaatttgaatgaatgaatatc 5457507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 9992956 - 9993102
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||  ||| ||||||||||||| |    |||||||||   ||||| ||||||||   || |  |||||||    
T  9992956 aatatagtcatatgtgtaggcatttgtactttgctgttttatgctattaacacgg---atgttgtgagcctgttcacagattcatcctttttgtttttag 9993052  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  9993053 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 9993102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 18994192 - 18994317
Alignment:
Q  43 cttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgat 142  Q
    |||||||||| ||||||| ||||||||||||   ||| ||||||||| ||||||||||||||||   || | |||||||||| ||||||| |||||||||    
T  18994192 cttttgtactatgtcgttttatgctattaac---atggatgttgtgattttgttcgcagattcatcctttttatttttagcg-atttgcaatgtatcgat 18994287  T
Q  143 gtactttatcaatttaaataaatgaatatc 172  Q
    ||||| ||| ||||| ||| ||||| ||||    
T  18994288 gtactctattaatttgaatgaatgattatc 18994317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 1215141 - 1215023
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtac 146  Q
    |||||||||||||| |||| |||||||||  ||| |||||||| ||||||| || |||||  ||| |  ||||||||||||||| |||| ||||||||||    
T  1215141 tgtactttgtcgttttatgttattaacat--tga-tgttgtgagtttgttcacaaattcatcatttttgtttttagcgaatttgtattgcatcgatgtac 1215045  T
Q  147 tttatcaatttaaataaatgaa 168  Q
    | ||||||||||||| ||||||    
T  1215044 tctatcaatttaaatgaatgaa 1215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 32104661 - 32104516
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||  | ||||||| ||| |||| |||||||||||||||    |||||||||   ||||| ||||||||  ||| |  ||||||     
T  32104661 aatatagtcatatgtgtatgcatttgtaccttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatcatttttgtttttaa 32104565  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||||    
T  32104564 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatat 32104516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 12248545 - 12248389
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| ||||||||||||||| ||| |||| ||| |||| |||| |||| ||||||||||    ||| || || ||||||| || |||||   ||     
T  12248545 cagagacttaaatatagtcatatgtgtaggctttagtattttgccgttttatgttattaacatgg---atgatgcgagtttgttcacatattcatccttt 12248449  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||||||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  12248448 ttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 12248389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 10043054 - 10043191
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||||| |||||| |||| ||| ||||||||||||| ||||||||||||   ||| ||||||||| |||||||  |||||  |  || |     
T  10043054 gagacttaaatatagttatatgtgtagc-tttagtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcagagatt-tatcttttt 10043148  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||||||||||| ||||||||||||||||| |||||||||    
T  10043149 gtttttagcgaattttcattgtatcgatgtactctatcaattt 10043191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 14530740 - 14530597
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| ||||| ||| ||||||||| |||| ||||||||||||   ||| ||||||||| |||| || ||||||||  ||| |  ||||||     
T  14530740 aatatagtcatatttataggcttgtgtactttgccgttttatgctattaac---atggatgttgtgagtttgctcacagattcatcatttttgtttttaa 14530644  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
     |||| || |||| ||||||||||| ||||||||| ||| |||||||    
T  14530643 tgaatctgtattgcatcgatgtactctatcaatttgaatgaatgaat 14530597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 32256553 - 32256414
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| | | |||| |||||||| |||| |||| |||||| |||    ||| ||||| ||||||| ||||||||   || ||    
T  32256553 gagacttaaatatagtcatatgtgtcggctttagtactttgccgttttatgttattaatatgg---atgatgtgagtttgttcacagattcatccttttc 32256457  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||||||||||| ||||||||||||||||| | |||||||    
T  32256456 gtttttagcgaattttcattgtatcgatgtactctgtcaattt 32256414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 15665821 - 15665974
Alignment:
Q  15 gagacttgaatatagtc--atatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||||||  ||||   ||| |||||| ||| || |||| |||||||||||||||    ||||||||| |||||| ||||||||    ||     
T  15665821 gagacttgaatatagtctcatattggtaggcttttgcactatgccgttttatgctattaacatgg---atgttgtgagtttgtttgcagattcgtccttt 15665917  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |  ||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  15665918 ttgtttttggcgaatttgcattgtatcgatgtactctatcaatttgaatgaatgaat 15665974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 16996713 - 16996567
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| | ||||||||||| |||| |||||||||||||||    |||||||||   ||||| |||||||||  |  |  |||||||    
T  16996713 aatatagtcatatatgtaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcaacctatttgtttttag 16996617  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||  |||||||||||| | ||||||| ||| ||||||||||    
T  16996616 cgaatttgcatcatatcgatgtactctttcaatttgaatgaatgaatatc 16996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 13977690 - 13977846
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttc--tatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||| ||||||||  || ||||||||| ||| ||||   ||||||||||||||     ||| ||||| ||||||||||||||||    |     
T  13977690 gagacttgaatataatcatatgtgcaggcttttgtaccttgccgttaattatgctattaacatag---atgctgtgagtttgttcgcagattcatttctt 13977786  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  ||||||| |||||||||||||||||||||||| ||||||||| ||  ||||||||||    
T  13977787 ttgtttttagtgaatttgcattgtatcgatgtactctatcaatttgaacgaatgaatatc 13977846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 3028298 - 3028359
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| || |||| ||||||||||    
T  3028298 gagacttgaatatagtcatatgtgtagacttttgtactttgtcattttatgttattaacatg 3028359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 5328327 - 5328383
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||    
T  5328327 tttttagcgaatttgcattatatcgatgtactctatcaatttaaaagaatgaatatc 5328383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 32062084 - 32062219
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||  ||| || ||||||||||| |||||||||||||||    ||||||||| ||||||| || ||| |   || | ||||||||    
T  32062084 aatatagtcatatttgtatgcttatgcactttgtcgttttatgctattaacatgg---atgttgtgagtttgttcacacattgatcctttttatttttag 32062180  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaat 161  Q
    |||||||| |||| ||||||||||| ||||| |||||||    
T  32062181 cgaatttgtattgcatcgatgtactatatcattttaaat 32062219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 44295696 - 44295752
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  44295696 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 44295752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 17019382 - 17019536
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||| |||||||||||| |||  ||||||||||||   || ||||||||||||   ||| ||||||||| |||||||||| |||||   || ||    
T  17019382 gagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaac---atggatgttgtgagtttgttcgcaaattcatccttttc 17019478  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||| |||| ||||||| ||  |||| ||  ||||| ||| ||||||||||    
T  17019479 gtttttagcgactttgtattgtattgagttactctactaatttgaatgaatgaatatc 17019536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 17549819 - 17549973
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||| |||||||||||| |||  ||||||||||||   || ||||||||||||   ||| ||||||||| |||||||||| |||||   || ||    
T  17549819 gagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaac---atggatgttgtgagtttgttcgcaaattcatccttttc 17549915  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||| |||| ||||||| ||  |||| ||  ||||| ||| ||||||||||    
T  17549916 gtttttagcgactttgtattgtattgagttactctactaatttgaatgaatgaatatc 17549973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 31147659 - 31147512
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||  ||||| | ||| ||||| ||||||||| || |||||||||||||||    |||  |||| |||||||||| |||||  ||| |     
T  31147659 gagacttgaatataaccatatatgtaggcttttatactttgtcattttatgctattaacatgg---atgcagtgaatttgttcgcatattcatcatttt- 31147564  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
     ||||||| |||||||||||||| ||||||||| ||| ||||| ||| |||||    
T  31147563 -tttttagtgaatttgcattgtaacgatgtactatattaattttaatgaatga 31147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 7269295 - 7269150
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    ||||||||||||| | |||  |||  ||||||||||||| ||| |||| ||||||||||    ||| | ||| |||||||||| |||||   || | |||    
T  7269295 acttgaatatagttacatgagtaggtttttgtactttgttgttttatgatattaacatgg---atgctatgagtttgttcgcaaattcatcctttttatt 7269199  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatg 166  Q
    |||| |||||||| |||||||||||| ||| ||||||||| ||||||||    
T  7269198 tttatcgaatttgtattgtatcgatgaactctatcaatttgaataaatg 7269150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 5917581 - 5917520
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    |||||||||||||| |||||||| ||| || |||||||||||| || |||||||||||||||    
T  5917581 gagacttgaatatattcatatgtgtaggctattgtactttgtcattttatgctattaacatg 5917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 10148233 - 10148392
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||| | ||| | |  ||||||||||||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||  ||| |     
T  10148233 gagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaac---atggatgatgtgagtttgttcacagattcatcattttt 10148329  T
Q  115 atttttagcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     ||||||||||      ||||| |||||||||||||| | ||||||||| ||| |||||||||    
T  10148330 gtttttagcgaattaggatttgtattgtatcgatgtaatctatcaatttgaatgaatgaatat 10148392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 11298583 - 11298443
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga 125  Q
    |||||||||| | |||  || |||||||||| ||| |||||||||||||||    ||||||||| |||||||  | |||||   || | ||||| || ||    
T  11298583 atagtcatatttgtagtattatgtactttgttgttttatgctattaacatgg---atgttgtgagtttgttcatatattcatcctttttattttaagtga 11298487  T
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||||    
T  11298486 atttgtattgcatcgatgtactctatcaatttgaataaatgaat 11298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 36545605 - 36545460
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca-aaattatcattttta 121  Q
    ||||||||||||||| ||  |  ||||||||||||||| ||||||||||||   ||| |||||||||   ||||| || |||||    || |  ||||||    
T  36545605 aatatagtcatatgtgtaagcaattgtactttgtcgttttatgctattaac---atggatgttgtgagcctgttcacaaattcatccttttttgttttta 36545509  T
Q  122 gcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||  |||||||||||| ||||||||| ||||||||||||||    
T  36545508 gcgaatttgcat--tatcgatgtactctatcaatttgaataaatgaatatc 36545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 23970982 - 23970875
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaattt-gcattgtatcgatgtac 146  Q
    ||||||||||||| ||||||||||||   ||| ||||||||| ||||||| ||||||||   || |  ||||||||| |||| | |||||||||||||||    
T  23970982 gtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcacagattcatcctttttgtttttagcggatttggtattgtatcgatgtac 23970886  T
Q  147 tttatcaattt 157  Q
    | |||||||||    
T  23970885 tctatcaattt 23970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 31712906 - 31712752
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||| ||||||||||||||| ||| |||| ||||||   |||| |||| ||||||||||    ||| ||||| ||||||| || |||||   || |  |    
T  31712906 gacttaaatatagtcatatgtgtaggctttagtacttgaccgttttatgttattaacatgg---atgctgtgagtttgttcacatattcatcctttttgt 31712810  T
Q  117 ttttagcgaatttgcattgtat--cgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||| ||| ||||||||||    
T  31712809 ttttagcgaattttcattgtatatcgatgtactctatcaatttgaatgaatgaatatc 31712752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 32413170 - 32413226
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||| ||||||||||    
T  32413170 tttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaatatc 32413226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 37659240 - 37659296
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  37659240 tttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 37659296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 3925522 - 3925369
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||| |||||||| ||| |||| |||||||| |||| |||| ||||||||||    ||| ||||| ||||||| ||||||||  | | |     
T  3925522 gagacttaaatataatcatatgtgtaggctttagtactttgccgttttatgttattaacatgg---atgatgtgagtttgttcacagattcatcagtttt 3925426  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||| ||||| ||| ||||||||||||| || | |||| ||| ||||||||||    
T  3925425 gtttttagcaaattttcat-gtatcgatgtactctacccatttgaatgaatgaatatc 3925369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 16809145 - 16809204
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaaca 74  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| ||| |||| ||||||||    
T  16809145 gagacttgaatatagtcatatgtgtaggcttctgtactttgttgttttatgttattaaca 16809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 18196977 - 18196839
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||| ||||||||||||| | ||| ||| ||||||||| |||| ||||| ||||||   ||||| |||| || |||||||||||||| |    | |      
T  18196977 agactttaatatagtcatatttgtagtcttctgtactttgccgttttatgcgattaac---atgaacgttgggagtttgttcgcagattgattccttttg 18196881  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||| |||||||| ||||||||||| |||| |||||||||    
T  18196880 tttttaacgaatttgtattgtatcgatatactctatcaattt 18196839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 13576041 - 13575881
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||| ||| | ||  | | | |||||||| ||| |||||||||||||||    ||||||||| |||||||||| |||||   || |     
T  13576041 gagacttgaatatagtcgtatttttaagcatatatactttgttgttttatgctattaacatgg---atgttgtgagtttgttcgcaaattcatccttttt 13575945  T
Q  115 atttttagcgaatttgcat------tgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||| |||| ||      |||||||||||||| ||||||||||||| ||||||||||    
T  13575944 gtttttagcgactttggatatgtattgtatcgatgtactctatcaatttaaatgaatgaatatc 13575881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 283837 - 283776
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  | || |||||||||||||||    
T  283837 gagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacatg 283776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 632040 - 632101
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  | || |||||||||||||||    
T  632040 gagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacatg 632101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 817852 - 817913
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  | || |||||||||||||||    
T  817852 gagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacatg 817913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 9270400 - 9270453
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||| |||||||    
T  9270400 tttttagcgaatttacattatatcgatgtactctatcaatttgaatgaatgaat 9270453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 28296914 - 28296787
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcga 141  Q
    |||||||| |||| |||||||||||||||    ||| ||||| ||||||| |||||||||  || |  ||||||||||||||| |||      |||||||    
T  28296914 gtactttgccgttttatgctattaacatgg---atgctgtgagtttgttcacagattcaacctttttgtttttagcgaatttggatttgtattgtatcga 28296818  T
Q  142 tgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||| ||| ||||||||||    
T  28296817 tgtactctatcaatttgaatgaatgaatatc 28296787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 31874370 - 31874423
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||    
T  31874370 aatatagtcatatgtgtaggcaattgtactttgtcgttttatgctattaacatg 31874423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7280958 - 7280807
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    ||||||||||||||||||   ||   ||||||||||||| ||| |||| ||||||||||    ||||| ||| |||||||||| |||||   || |  ||    
T  7280958 acttgaatatagtcatataagtatgtttttgtactttgttgttttatgatattaacatgg---atgttatgagtttgttcgcaaattcattctttttctt 7280862  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||| |||||| | |||||||||||| ||| ||||||||| ||| |||| |||||    
T  7280861 tttatcgaattagtattgtatcgatgaactctatcaatttgaatgaatgcatatc 7280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 8054542 - 8054486
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| ||| |||||||||| | ||||||||| ||| ||||||||||    
T  8054542 tttttagcgaatttgtattatatcgatgtattctatcaatttgaatgaatgaatatc 8054486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 9501977 - 9502025
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  9501977 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 9502025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 26538764 - 26538820
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||||||||||||||||||||||  |||||||| ||| ||||| ||||    
T  26538764 tttttagcaaatttgcattgtatcgatgtactcaatcaatttgaatgaatgattatc 26538820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 27989069 - 27989125
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||  |||||  |||||||||||||||| ||||||||||||||||| |||||    
T  27989069 atttttagttaatttatattgtatcgatgtactctatcaatttaaataaataaatat 27989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 28046371 - 28046427
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||  |||||  |||||||||||||||| ||||||||||||||||| |||||    
T  28046371 atttttagttaatttatattgtatcgatgtactctatcaatttaaataaataaatat 28046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 13570486 - 13570439
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  13570486 aatttgtattgtatcgatatactctatcaatttaaatgaatgaatatc 13570439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 28298507 - 28298428
Alignment:
Q  81 atgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaa 160  Q
    ||||||||| ||||||||||||||||  ||| | |||||||| ||||||| | || |||| |||| |||||| |||||||    
T  28298507 atgttgtgagtttgttcgcagattcatcatttttatttttagtgaatttgtactgcatcgctgtattttatccatttaaa 28298428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 24790888 - 24790842
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  24790888 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 24790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 37129499 - 37129449
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaac 73  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||    
T  37129499 aatatagtcatatgtgtaggcatttgtactttgacgttttatgctattaac 37129449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 1809955 - 1809910
Alignment:
Q  127 tttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  1809955 tttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 1809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 2234190 - 2234142
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||| |||||||||||| ||||||||| ||| ||||||||||    
T  2234190 gaatttgtattatatcgatgtactctatcaatttgaatgaatgaatatc 2234142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 2629192 - 2629255
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcg--ttctatgctattaacatg 76  Q
    ||||||| ||||||||||||||| |||  ||| |||||||||||  || |||||||||||||||    
T  2629192 gagacttaaatatagtcatatgtgtaggatttagtactttgtcgttttatatgctattaacatg 2629255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 2968932 - 2968972
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  2968932 attgtatcgatgtactctatcaatttgaatgaatgaatatc 2968972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 7579567 - 7579527
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  7579567 attgtatcgatgtactctatcaatttgaatgaatgaatatc 7579527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 7763468 - 7763432
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaat 161  Q
    |||||| |||||||||||||| |||||||||||||||    
T  7763468 aatttgtattgtatcgatgtagtttatcaatttaaat 7763432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 37613045 - 37613093
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||| |||| ||||||||| ||| ||||||||||    
T  37613045 gaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatc 37613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 8644510 - 8644664
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||   ||| ||||||||| ||||||||||||||||   || |     
T  8644510 gagactttaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcgcagattcatctttctt 8644606  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||| |||||||||||||||||||||||| ||||||||| ||| ||| ||||||    
T  8644607 gtttttagtgaatttgcattgtatcgatgtactctatcaatttgaatgaattaatatc 8644664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 20496475 - 20496629
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||    ||| ||||||||| ||||||||||||||||   || |     
T  20496475 gagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaa---tatggatgttgtgagtttgttcgcagattcatccttttt 20496571  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||||||||||||| ||||||  ||||||||| ||| ||||||||||    
T  20496572 gtttttagcgaatttgcattgtatcaatgtacgctatcaatttgaatgaatgaatatc 20496629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 4921694 - 4921572
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtac 146  Q
    |||| ||||||||| ||||||||||||||||   ||||| ||| ||||||| ||||||||  ||| | ||||||||||| |||| || ||||||||||||    
T  4921694 tgtattttgtcgttttatgctattaacatga---atgttatgagtttgttcacagattcatcatttttatttttagcgagtttgtatggtatcgatgtac 4921598  T
Q  147 tttatcaatttaaataaatgaatatc 172  Q
    | ||||||||||||| ||||||||||    
T  4921597 tctatcaatttaaatgaatgaatatc 4921572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 31748247 - 31748392
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| |||||||||||||||    |||||||||  |||||| ||||||||   || |  |||||||    
T  31748247 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcttgttcacagattcatcctttttgtttttag 31748343  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||| |||||    
T  31748344 cgaatttgcattatatcgatgtactctatcaatttgaatgaataaatat 31748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 5417056 - 5416903
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||  ||||||||||||| |||| ||||||||||||   ||| ||||||||| |||||||| |||||||  ||| |     
T  5417056 gagacttgaatatagtcatatgtgtatgcttttgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcgtagattcatcattttt 5416960  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||| || |||  ||||||| ||||||| ||| ||||| ||| ||||||||||    
T  5416959 gtttttagcaaaattgtgttgtatc-atgtactctattaatttgaatgaatgaatatc 5416903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 904552 - 904697
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    |||||||||||||||||  || ||| |||||||||||||||||| ||| ||||||||   |||||| |||||| ||||||||| ||||||  ||| |  |    
T  904552 gacttgaatatagtcatccgtgtaggcttttgtactttgtcgttttatactattaac---atgaatattgtgagtttgttcgccgattcatcatttttgt 904648  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaat 165  Q
    ||||||| || ||  ||||||||||||||||  |||||||| |||||||    
T  904649 ttttagcaaactttaattgtatcgatgtactgcatcaatttgaataaat 904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 4663652 - 4663499
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||| ||||||||| ||  |||| ||||| || | || |||||||||||||||    ||||||||| ||||||| ||||||||   || |     
T  4663652 gagacttaaatatggtcatatgtgtaagctttagtactatgccattttatgctattaacatgg---atgttgtgagtttgttcacagattcatccttttt 4663556  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||| ||||||||||||||||| || |||||| ||| |||||||||    
T  4663555 atttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatat 4663499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 8633020 - 8632875
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||||| ||  |||||||||||||||   |||||||||   ||||| ||||||||   || |  |||||||    
T  8633020 aatatagtcatatgtgtaggcatttgtactttgtcatttcatgctattaacatga---atgttgtgagcctgttcacagattcatcttttttgtttttag 8632924  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| | ||||||| ||| |||||||||    
T  8632923 cgaatttgcattatatcgatgtactatttcaatttgaatgaatgaatat 8632875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 548673 - 548550
Alignment:
Q  46 ttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgta 145  Q
    ||||||||||||||| |||||||||||||||    ||||||||| | ||||| ||||||||   || | |||||| ||||||||||||| ||| ||||||    
T  548673 ttgtactttgtcgttttatgctattaacatgg---atgttgtgagtctgttcacagattcatcctttttattttttgcgaatttgcattatattgatgta 548577  T
Q  146 ctttatcaatttaaataaatgaatatc 172  Q
    || ||||||||| ||| ||||||||||    
T  548576 ctctatcaatttgaatcaatgaatatc 548550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 34020893 - 34021036
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| |||||||||||||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || |  |||||||    
T  34020893 aatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaac---atgtatgatgtgagtttgttcacagattcatcctttttgtttttag 34020989  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||| ||||||||||| ||||||| | ||| |||||||    
T  34020990 cgaatttgtattgcatcgatgtactctatcaatatgaatgaatgaat 34021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 12654142 - 12653982
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | | |||| ||||||||| ||||||||||||   ||| ||| ||||| ||||||||||||||||  ||| |     
T  12654142 gagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatgctattaac---atggatgatgtgagtttgttcgcagattcatcattttt 12654046  T
Q  115 atttttagcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||      | ||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  12654045 gtttttagcgactttggaattgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 12653982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 10744864 - 10745017
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||| |||| |||||||||| |   ||| ||| ||||| ||||||| || |||||   || |     
T  10744864 gagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattagc---atggatgatgtgagtttgttcacaaattcatccttttt 10744960  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||| |||||||  |||||||||||||||| || |||||| ||| |||||||||    
T  10744961 gtttttaacgaatttcaattgtatcgatgtactctaccaatttgaatgaatgaatat 10745017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 11426240 - 11426381
Alignment:
Q  28 agtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaat 127  Q
    |||||||||| ||| | |||||||||||| ||| |||||||||||||||    ||| |||||   |||||  |||||||   || |  ||||||||||||    
T  11426240 agtcatatgtgtaggcatttgtactttgttgttttatgctattaacatgg---atgatgtgagcctgttcatagattcatcctttttgtttttagcgaat 11426336  T
Q  128 ttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||| | ||||||||||| ||||||||||    
T  11426337 ttgcattatatcgatgtactctttcaatttaaatgaatgaatatc 11426381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 23843248 - 23843103
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| | ||||||| ||| |||| |||||||||| ||||    |||||||||   ||||| ||||||||  ||| |  |||||||    
T  23843248 aatatagtcatatatgtaggcatttgtaccttgccgttttatgctattagcatgg---atgttgtgagcatgttcacagattcatcatttttgtttttag 23843152  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| ||| |||||||| ||||||||| ||| |||||||||    
T  23843151 cgaatttgcattatatggatgtactctatcaatttgaatgaatgaatat 23843103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 32804575 - 32804635
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaac 73  Q
    |||||||||||||||||| |||||| ||| |||||||||||||| ||| ||||||||||||    
T  32804575 cagagacttgaatatagttatatgtgtaggcttttgtactttgttgttttatgctattaac 32804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 7049535 - 7049588
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | |||||||||||||||| |||||||||||||||    
T  7049535 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatg 7049588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 16913615 - 16913761
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgtt---cgcagattcaaaattatcatttt 119  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| |||||||||   ||||   | ||||||||   || |  ||||    
T  16913615 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagcctgttcaccacagattcattctttttgtttt 16913711  T
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||||||||||| |||||||||||| | ||||||| ||| |||||||    
T  16913712 tagcgaatttgcattatatcgatgtactatttcaatttgaatgaatgaat 16913761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 20845393 - 20845449
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| ||| ||||||||||    
T  20845393 tttttagcgaatttgtattatatcgatgtactatatcaatttgaatgaatgaatatc 20845449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 30813352 - 30813514
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||||||||||||||||| | ||| | |  |||| ||| |||| |||||||||||||||    ||| ||||| ||||||| ||||||||   ||     
T  30813352 cagagacttgaatatagtcatatttgtaggcataggtaccttggcgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatccttt 30813448  T
Q  113 tcatttttagcgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  ||||||||||||||| |||      ||||||||||||| ||||||||| ||| ||||||||||    
T  30813449 ttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 30813514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 31705574 - 31705622
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  31705574 gaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatc 31705622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 32458020 - 32458076
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||  ||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  32458020 atttttattgaatttgcattatatcgatgcactttatcaatttaaatgaatgaatat 32458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 12576305 - 12576159
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| |||||||| ||||||||||||   ||| ||  |||||   ||||| || |||||   || |  |||||||    
T  12576305 aatatagtcatatgtgtaggcatttgtaccttgtcgttttatgctattaac---atggatactgtgagcctgttcacaaattcatcctttttgtttttag 12576209  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||| ||||||| | ||||||| ||| ||||||||||    
T  12576208 cgaatttgcattatatctatgtactctttcaatttgaatgaatgaatatc 12576159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 5545062 - 5545116
Alignment:
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||    
T  5545062 tttagcgaatttacattgtatcaatgtactctatcaatttgaatgaatgaatatc 5545116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 12481089 - 12481043
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  12481089 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 12481043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 12652033 - 12651971
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    ||||||||||||||||||||||| |||  ||||||| |||||| || |||||||||| |||||    
T  12652033 gagacttgaatatagtcatatgtgtaggtttttgtaatttgtcattttatgctattagcatga 12651971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 15127961 - 15127808
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca-aaattatc 114  Q
    ||||||||| |||||||||||| ||| ||| |||||| ||| ||| |||| |||||||   ||| ||||||||| |||||||| ||||| |    || |     
T  15127961 agacttgaacatagtcatatgtgtaggcttctgtactctgttgttttatgttattaac---atggatgttgtgaatttgttcgtagattgatcctttttt 15127865  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||||||||||||| ||||||  ||||||| |||| |||| ||| |||||||||    
T  15127864 gtttttagcgaatttgcgttgtattaatgtactctatcgatttgaatgaatgaatat 15127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 20845298 - 20845351
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||| | ||| | |||||||||||||||| |||||||||||||||    
T  20845298 aatatagtcatatttgtagacatttgtactttgtcgttttatgctattaacatg 20845351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 22530527 - 22530631
Alignment:
Q  62 tatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaat 161  Q
    |||||||||||||| | ||||||   || |||||||||| |||||  ||| |  ||||||| ||||||| |||||||||||||||| ||  |||||||||    
T  22530527 tatgctattaacataaagaatgt---gagtttgttcgcatattcatcatttttgtttttagtgaatttgtattgtatcgatgtactctacaaatttaaat 22530623  T
Q  162 aaatgaat 169  Q
     |||||||    
T  22530624 caatgaat 22530631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 19760168 - 19760224
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||||||||||| |||||||||||| ||||||||| | | ||||||||||    
T  19760168 tttttatcgaatttgcattatatcgatgtactctatcaatttgagtgaatgaatatc 19760224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 33197609 - 33197665
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||| |||||||||||||||||||||| |  |||||||| |||||||| ||||    
T  33197609 atttttagtgaatttgcattgtatcgatgtattcaatcaatttgaataaatgtatat 33197665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 2304549 - 2304502
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||| ||||||||||| ||||||||||||| ||||||||||    
T  2304549 aatttgtattgcatcgatgtactctatcaatttaaatgaatgaatatc 2304502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 6295961 - 6295914
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  6295961 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 6295914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 6302771 - 6302724
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  6302771 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 6302724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 19402562 - 19402516
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  19402562 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 19402516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 23654660 - 23654706
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  23654660 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 23654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 23637834 - 23637789
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||| |||||||||||||||||||| ||||| ||| |||||||    
T  23637834 gaatttgtattgtatcgatgtactttattaatttgaatgaatgaat 23637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 4660845 - 4660885
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  4660845 attgtatcgatgtactctatcaatttgaatgaatgaatatc 4660885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 15589829 - 15589789
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  15589829 attgtatcgatgtactctatcaatttgaatgaatgaatatc 15589789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 31804598 - 31804650
Alignment:
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||  ||| |||||||||||| ||||||||||||| ||| ||||||    
T  31804598 tagcgaatttttattatatcgatgtactctatcaatttaaatgaataaatatc 31804650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 43157060 - 43157213
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||| ||||||||||||||| ||| |||| ||||||||||||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |      
T  43157060 agacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttg 43157156  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  43157157 tttttagcgaattttcattgtatcgatgtactctatcaatttgaataaatgaatatc 43157213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 7242618 - 7242464
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||| ||| |||||||||||    ||||||| | ||| ||| ||||||||   || |     
T  7242618 gagacttgaatatagtcagatgtgtaggcttttgtattttgtcgttttatactattaacatgg---atgttgtaagtttattcacagattcatctttttt 7242522  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7242521 gtttttagcgaatttgcattgtatcgatgtactctatcaatttaaataaatgaatatc 7242464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 14346712 - 14346867
Alignment:
Q  14 agagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattat 113  Q
    |||||||| ||||||||||||||| ||| |||| |||||||| |||| |||||||||||||||    ||| ||||| ||||||| | ||||||   |  |    
T  14346712 agagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatgg---atgctgtgagtttgttcacggattcatcctctt 14346808  T
Q  114 catttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
      |||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||    
T  14346809 tgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaatatc 14346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 29474152 - 29474006
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||||||||| ||||||| ||||||||   || |  |||||||    
T  29474152 aatatagtcatatgtgtagtctttagtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattcatcctttttgtttttag 29474056  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||| |||||||| || |||||| ||| ||||||||||    
T  29474055 cgaattttcattgtattgatgtactctaccaatttgaatgaatgaatatc 29474006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 29576953 - 29576799
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||| ||   || | ||||||||| |||||| | |||||||  ||| |     
T  29576953 gagacttgaatatagtcatatgtgtaggcttttgtaccttgccgttttatactataaa---gagggatgttgtgagtttgtttgtagattcatcattttt 29576857  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     || ||||| |||||||||||||| ||| |||||||||||||| ||| ||||||||||    
T  29576856 gttattagcaaatttgcattgtattgatatactttatcaatttgaatgaatgaatatc 29576799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 38434880 - 38435034
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||| || |||||||||||||||    ||| ||||| ||||||  ||||||||   || |     
T  38434880 gagacttaaatatagtcatatgtgtaggctttagtactttgtcattttatgctattaacatgg---atgatgtgagtttgtttacagattcatccttttt 38434976  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| || ||||| |||| |||||||||||| ||||||||| ||| ||||||||||    
T  38434977 atttttggcaaattttcattatatcgatgtactctatcaatttgaatgaatgaatatc 38435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 6082263 - 6082111
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | | ||||||||| |||| ||||||||||||   ||| ||||||||| ||||||| ||||||||   || |     
T  6082263 gagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattcatctttttt 6082167  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||| |||||||| | |||||||||||||| ||||||||| ||||||| |||||    
T  6082166 gtttttaacgaatttgga-tgtatcgatgtactctatcaatttgaataaataaatat 6082111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 46775690 - 46775537
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||| |||||||| ||| ||||||| |||||||||| ||||||||||||   ||  ||||||||| |||||| ||| |||||   || |     
T  46775690 gagacttgaatataatcatatgtgtaggcttttgtgctttgtcgttttatgctattaac---atagatgttgtgagtttgtttgcatattcagccttttt 46775594  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||| |||||||||||||| ||||||| | | |||||||||| ||| |||||||||    
T  46775593 gttttgagcgaatttgcattttatcgatattccttatcaatttgaatgaatgaatat 46775537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 50981548 - 50981395
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||| | ||| ||| |||||||||| ||| |||| ||||||||||    ||||||||| ||||||| || ||||| | ||     
T  50981548 cagagattttaatatagtcatatttgtaggcttatgtactttgttgttttatgatattaacatgg---atgttgtgagtttgttcacaaattcatacttt 50981452  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |  ||||||||||||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  50981451 ttgtttttagcgaatttgtattgcatcgatgtactatatcaatttgaatgaatgaat 50981395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 4622537 - 4622382
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| ||||||||||| ||| ||| | || ||||||||||||| |||||||||||||||    ||| ||||| |||||||||| |||||   |      
T  4622537 cagagactttaatatagtcatgtgtgtaggcgttcgtactttgtcgttttatgctattaacatgg---atgatgtgagtttgttcgcaaattcatc-tcg 4622442  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  4622441 ttgtttttagcaaatttgcattgtattaatgtactctatcaatttcaataaatgaatatc 4622382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 4959405 - 4959252
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||||||||||||||  || ||| |||||||||||||  ||| ||||||||||||||  || ||||||||| ||||||||||  ||||   || |      
T  4959405 agacttgaatatagtcatgggtgtagacttttgtactttgcagttttatgctattaacat--tg-atgttgtgagtttgttcgcatgttcattctttttg 4959309  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| | ||||||||||||| ||||||||||||||||| | ||| ||||||||||    
T  4959308 tttttaacaaatttgcattgtaacgatgtactttatcaatatgaatgaatgaatatc 4959252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 12519974 - 12520055
Alignment:
Q  91 tttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||   || | ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  12519974 tttgttcgcagattcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaatttgaataaatgaatatc 12520055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 46728754 - 46728598
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| ||||||||||||||| ||| |||| |||||||| |||| |||  ||||||||||    ||| ||||| ||||||| ||||||||   ||     
T  46728754 cagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatattattaacatgg---atgctgtgagtttgttcacagattcatccttt 46728658  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||||||||| ||||||||||||||||| || |||||| ||| ||| ||||||    
T  46728657 ttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaattaatatc 46728598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 4634573 - 4634719
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||    ||| |||||   ||||| || |||||   || |  |||||||    
T  4634573 aatatagtcatatgtgtaggcaattgtactttgtcgttttatgctattaacatgg---atgatgtgagcatgttcacatattcatcctttttgtttttag 4634669  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  4634670 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 4634719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 9662143 - 9662289
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    ||| ||||| | ||||| || |||||   || |  |||||||    
T  9662143 aatatagtcatatgtgtagacaattgtactttgccgttttatgctattaacatgg---atgatgtgagtctgttcacatattcatcctttttgtttttag 9662239  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  9662240 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 9662289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 30416427 - 30416305
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattat-catttttagcgaatttgcattgtatcgatgtac 146  Q
    |||||||| |||| |||||||||||||||    ||| ||||| ||||||| ||||||||   || | | |||||||||||||| ||||||||||||||||    
T  30416427 gtactttgccgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatcctttttcgtttttagcgaattttcattgtatcgatgtac 30416331  T
Q  147 tttatcaatttaaataaatgaatatc 172  Q
    | ||||||||||||| ||||||||||    
T  30416330 tctatcaatttaaatgaatgaatatc 30416305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 41486869 - 41487010
Alignment:
Q  27 tagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaa 126  Q
    ||||||||||| ||| | |||||||||||||||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  |||||||||||    
T  41486869 tagtcatatgtgtaggcatttgtactttgtcgtt-tatgctattaacatgg---atgttgtgagcctgttcacagattcatcctttttgtttttagcgaa 41486964  T
Q  127 tttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| | |||||||||| ||||||||| ||| ||||||||||    
T  41486965 tttgcattatttcgatgtactctatcaatttgaatgaatgaatatc 41487010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 46716718 - 46716572
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    |||||||||   ||||| |||||| |   || | ||||||||    
T  46716718 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagatttatcctttttatttttag 46716622  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||| |||||||||||| ||||||||| ||| ||||||||||    
T  46716621 cgaatttacattatatcgatgtactatatcaatttgaatgaatgaatatc 46716572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 53903869 - 53904015
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| ||| |||||||||||    ||| |||||   ||||| ||||||||   || |  |||||||    
T  53903869 aatatagtcatatgtgtaggcatttgtactttgtcgttttattctattaacatgg---atgctgtgagcctgttcacagattcatcctttttgtttttag 53903965  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  53903966 cgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 53904015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 23002756 - 23002612
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  |||| ||    
T  23002756 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatcctttttgtttt-ag 23002661  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||||    
T  23002660 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatat 23002612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 29589193 - 29589040
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || |     
T  29589193 gagacttaaatatagtcatatgtgtatgctttagtactttgtcgttttatgctattaac---atggatgatgtgaatttgttcacagattcatccttttt 29589097  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||| ||||||| ||||| ||| |||||||  |||||||| ||| |||||||||    
T  29589096 gtttttaacgaattttcattgcatcaatgtactccatcaatttgaatgaatgaatat 29589040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 40861220 - 40861359
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||||||| |||| ||  |||| ||||||||||||| ||||||||||||   ||| ||| || || |||||||  |||||||   || ||    
T  40861220 gagacttaaatatagtcagatgtgtaagctttagtactttgtcgttttatgctattaac---atggatgatgcgagtttgttcatagattcatccttttc 40861316  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||| ||||||| ||||||||||||||||| |||||||||    
T  40861317 gtttttaacgaattttcattgtatcgatgtactctatcaattt 40861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 5388805 - 5388946
Alignment:
Q  25 tatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcg 124  Q
    ||||||||||| | ||| ||| ||||||||  |||| |||||||||| ||||    ||||||||| ||||||| ||||||||   ||   ||||||| ||    
T  5388805 tatagtcatatttgtaggcttatgtacttttccgttttatgctattagcatgg---atgttgtgagtttgttcacagattcatcctttatatttttaacg 5388901  T
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||| |||||| ||||||||| ||||||||||||| |||||||    
T  5388902 aatttgtattgtagcgatgtactctatcaatttaaatgaatgaat 5388946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 19885798 - 19885645
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||| |||||||||||  ||| |||||||||||||||| |  ||| ||||||||||     || ||||| ||||||||||||||||   || |     
T  19885798 gagacttgaaaatagtcatatgagtaggcttttgtactttgtcgcttcatgatattaacatggc---tgctgtgagtttgttcgcagattcattcttttt 19885702  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||||| |||||  ||||||| ||| |||| ||||||||| |||||||||||||    
T  19885701 gtttttagcaaatttaaattgtattgatatactgtatcaatttgaataaatgaatat 19885645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 23067672 - 23067527
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    |||||||||   ||||| || |||||   || |  |||||||    
T  23067672 aatatagtcatatgtgtaggcctttgtaccttgccgttttatgctattaacatgg---atgttgtgagcctgttcacaaattcatcctttttgtttttag 23067576  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| | ||||||| ||| |||||||||    
T  23067575 cgaatttgcattatatcgatgtactctgtcaatttgaatgaatgaatat 23067527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 16992152 - 16992295
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| ||||| ||||||||| ||| ||||  |||||||  ||| |||||||||||||||    |||||||||  |||||| || |||||   ||     
T  16992152 cagagacttaaatattgtcatatgtgtaggctttaatactttgctgttttatgctattaacatgg---atgttgtgaggttgttcacatattcatccttt 16992248  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaa 159  Q
    |  |||||||||| ||| ||||||||||||||||| |||||||||||    
T  16992249 ttgtttttagcgagttttcattgtatcgatgtactctatcaatttaa 16992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 23926331 - 23926462
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||| ||||  |||||||||||||     ||||||||| ||||||| ||||||||   || |  |||||||    
T  23926331 aatatagtcatatttgtaggcttatgtactttgccgtttgatgctattaacatag---atgttgtgagtttgttcacagattcatcctttttgtttttag 23926427  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||||| |||||||| ||||||| |||||||||    
T  23926428 cgaatttgtattgtatcaatgtactctatcaattt 23926462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 34668566 - 34668622
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  34668566 tttttagcaaatttgcattatatcgatgtactttatcaatttaaatgaataaatatc 34668622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 6408727 - 6408881
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||| ||| ||| |||| ||||||||  ||| |||||||||||    ||| ||||||||| ||||||| || |||||   || |     
T  6408727 gagacttaaatatagtcatctgtgtaggctttggtactttgctgttttatgctattaa---aatggatgttgtgagtttgttcacatattcatccttttt 6408823  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| | |||||  ||| |||| ||||||||| ||||||||||| ||||||||||    
T  6408824 atttttatcaaatttttattatatcaatgtactttgtcaatttaaatgaatgaatatc 6408881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 15729813 - 15729659
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||| ||||  | ||||||||||||    ||| ||||| ||||||| || |||||   || |     
T  15729813 gagacttaaatatagtcatatgtgtaggctttagtactttgccgtttcacgctattaacatgg---atgctgtgagtttgttcacaaattcatccttttt 15729717  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     || ||||| ||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  15729716 gttgttagcaaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 15729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 54420564 - 54420418
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||  | |||||||||||  ||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  |||||||    
T  54420564 aatatagtcatatgtgtaagcatttgtactttgatgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatcctttttgtttttag 54420468  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  54420467 tgaatttgcattatatcgatgtactatttcaatttgaatgaatgaatatc 54420418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 3169757 - 3169803
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaata 162  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3169757 tttttagcgaatttgcattgtatcgatgtactctatcaatttgaata 3169803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 7083637 - 7083485
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| ||||| | |  |||||||| |||| ||||||||||||   ||| ||||||||| ||||||| ||||||||   || | ||||||||    
T  7083637 aatatagtcatatttataggcataggtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattcatcctttttatttttag 7083541  T
Q  123 cgaatttg------cattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||       |||||||||||||||| ||||||||| | | ||||||||||    
T  7083540 cgaatttgaatttatattgtatcgatgtactctatcaatttgagtgaatgaatatc 7083485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 25658496 - 25658617
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtac 146  Q
    ||||||||| |||| |||||||| ||||||    ||||||||| ||||||| || |||||  ||| |  ||||||||||||||| |||||||| |||||     
T  25658496 tgtactttgccgttttatgctatcaacatgg---atgttgtgagtttgttcacaaattcattatttttgtttttagcgaatttgtattgtatcaatgtat 25658592  T
Q  147 tttatcaatttaaataaatgaatat 171  Q
    ||| ||||||| ||| |||||||||    
T  25658593 tttgtcaatttgaatgaatgaatat 25658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 31311761 - 31311904
Alignment:
Q  24 atatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagc 123  Q
    |||||||||| ||| ||| |||||||||||||||||| ||||||||||||   ||| ||||||| | |||||||||| |||||  ||  |  ||||||      
T  31311761 atatagtcatgtgtgtaggcttttgtactttgtcgttttatgctattaac---atggatgttgt-agtttgttcgcatattcatcatctttgtttttaat 31311856  T
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||| || |||| ||||||||| ||| ||||||||||    
T  31311857 gaatttacattgtatc-atatactatatcaattttaatgaatgaatatc 31311904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 37869241 - 37869097
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| |||| |||||||   ||| |||||||||   ||||| || |||||   || |  ||||||     
T  37869241 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgttattaac---atggatgttgtgagcctgttcacatattcatcctt-ttgtttttaa 37869146  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     ||||||||||| ||| |||||||| ||||||||| |||||||||||||    
T  37869145 tgaatttgcattatatagatgtactctatcaatttgaataaatgaatat 37869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 9549729 - 9549782
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  9549729 aatatagtcatatgtatagacatttgtactttgccgttttatgctattaacatg 9549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 28990580 - 28990704
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||  ||||||||  || |||||||||||||| ||| ||||||||||||   ||| ||||||||| |||||||||||||| |   || |     
T  28990580 gagactttaatattatcatatgtgcagacttttgtactttgttgttttatgctattaac---atggatgttgtgagtttgttcgcagatttatcgttttt 28990676  T
Q  115 atttttagcgaatttgcattgtatcgat 142  Q
     |||||| || |||||||||||||||||    
T  28990677 gtttttaacggatttgcattgtatcgat 28990704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 2945518 - 2945574
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||| ||| ||||||    
T  2945518 tttttagcgaatttgcatcgtatcgatgtactctatcaatttgaatgaattaatatc 2945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 3673778 - 3673921
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||| |||| ||||||||||||   ||| ||||||||| ||||||| |||||||    || | |||||||     
T  3673778 aatatagtcatatttgtaggcttgtgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattcgtcctttttatttttaa 3673874  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    | |||||  |||  ||||||||||| ||||||||| ||| |||||||    
T  3673875 caaatttatattacatcgatgtactctatcaatttgaatgaatgaat 3673921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 23963954 - 23964018
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    |||||||||||||| | |||||| | ||| |||||||||||||||||| ||||| ||||||||||    
T  23963954 cagagacttgaatacaatcatatttgtagacttttgtactttgtcgttttatgcgattaacatga 23964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 44375009 - 44374953
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  44375009 tttttaacgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 44374953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 3159371 - 3159418
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  3159371 gaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatat 3159418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 12716957 - 12716796
Alignment:
Q  14 agagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattat 113  Q
    |||||||| ||||||||||||||| ||| | |   |||||||| ||| ||| ||||||| |||    ||||||||| ||| ||||||||||||  ||| |    
T  12716957 agagactttaatatagtcatatgtgtaggcataaatactttgttgttttatactattaatatgg---atgttgtgagtttcttcgcagattcatcattct 12716861  T
Q  114 catttttagcg------aatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||| |      ||| || |||||||||||||| ||||||||||| ||||||||||||||    
T  12716860 tatttttagtgcctttgaatatgtattgtatcgatgtaatttatcaatttgaataaatgaatatc 12716796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 20961832 - 20961883
Alignment:
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||| |||||||||||| | ||||||| |||||||||||||    
T  20961832 tagcgaatttgcattatatcgatgtactctttcaatttgaataaatgaatat 20961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 47704146 - 47704087
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||||||| ||||||||||||||||  |||||||||| ||||||| || |||||    
T  47704146 tgtactttgtcgttttatgctattaacatgaataatgttgtgagtttgttcccatattca 47704087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 51646377 - 51646440
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||| ||||||||||||||| ||| ||||  ||||||| |||| |||||||||||||||    
T  51646377 cagagacttaaatatagtcatatgtgtaggctttaatactttgccgttttatgctattaacatg 51646440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 393984 - 393938
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  393984 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 393938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 1645338 - 1645292
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaata 162  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  1645338 tttttagtgaatttgcattgtatcgatgtactctatcaatttgaata 1645292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 18502552 - 18502506
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  18502552 atttgtattgtatcgatgtactctatcaatttaaatgaatgaatatc 18502506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 20887549 - 20887421
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcg 140  Q
    ||||||||| |||| |||| ||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||| |||      ||||||    
T  20887549 tgtactttgccgttttatgatattaacatgg---atgttgtgagtttgttcacagattcatcttttttgtttttagcgaatttggatttatattgtatcg 20887453  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||| ||||||||||    
T  20887452 atgtactctatcaatttaaatgaatgaatatc 20887421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 35338685 - 35338731
Alignment:
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  35338685 aatttacattgtatcaatgtactctatcaatttaaataaatgaatat 35338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 9474272 - 9474231
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  9474272 tttttagcgaatttgcattatatcgatgtactctatcaattt 9474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 34115480 - 34115427
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  34115480 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatg 34115427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 56250557 - 56250606
Alignment:
Q  123 cgaatttgcattgtatcgatgtactttatcaa-tttaaataaatgaatat 171  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  56250557 cgaatttgtattatatcgatgtactttatcaattttaaataaatgaatat 56250606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 9549812 - 9549868
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||||||||| |||||||||||| ||| ||||| ||| ||||||||||    
T  9549812 tttttagcaaatttgcattatatcgatgtactatattaatttgaatgaatgaatatc 9549868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 14542246 - 14542190
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||| |||| |||||||||| | ||||||||| ||| ||||||||||    
T  14542246 tttttagcgaatttacattatatcgatgtattctatcaatttgaatgaatgaatatc 14542190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 30469947 - 30469816
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||  |||| |||||||||||||||    ||| | |||   ||||| ||||||||   || |  |||||||    
T  30469947 aatatagtcatatgtgtaggcatttgtacttttccgttttatgctattaacatgg---atgatctgagcctgttcacagattcatcctttttgtttttag 30469851  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||||||||| |||||||||||| | |||||||    
T  30469850 cgaatttgcattatatcgatgtactctttcaattt 30469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 31932656 - 31932704
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||| |||||||||||||||||||| ||| ||||||||||    
T  31932656 gaatttgtattgtgtcgatgtactttatcaatttgaatgaatgaatatc 31932704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 42197962 - 42198010
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  42197962 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 42198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 51958744 - 51958783
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  51958744 attgtatcgatttattttatcaatttaaataaatgaatat 51958783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 6789709 - 6789621
Alignment:
Q  14 agagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||| |||||||| |||||| |||  ||||| ||||||| ||| ||||||||||||   ||| ||||||||| ||| ||||||||||||    
T  6789709 agagactttaatatagtgatatgtgtagg-ttttgaactttgttgttttatgctattaac---atggatgttgtgagtttattcgcagattca 6789621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 6882355 - 6882401
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  6882355 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 6882401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 11210023 - 11209977
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  11210023 atttgcattgtattgatgtactctatcaatttgaatgaatgaatatc 11209977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 13965954 - 13966000
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  13965954 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 13966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 24100544 - 24100590
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  24100544 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 24100590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 28837466 - 28837512
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  28837466 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 28837512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 38943867 - 38943821
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  38943867 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 38943821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 45350780 - 45350734
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  45350780 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 45350734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 45360259 - 45360213
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  45360259 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 45360213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 46268076 - 46268122
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||||||    
T  46268076 atttgtattgtatcgatgtactctatcaatttaaatgaataaatatc 46268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 626271 - 626226
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||||||    
T  626271 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaat 626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 33020751 - 33020698
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||| | ||| ||| ||||||||||| || |||||||||||||||    
T  33020751 aatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacatg 33020698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 42972418 - 42972459
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||| |||||||||||| |||||||||||| |||||||||    
T  42972418 tttttaacgaatttgcattatatcgatgtactctatcaattt 42972459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 50002927 - 50002874
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||||||||| ||||| |||||||||||| |||| |||| ||| |||||||    
T  50002927 tttttagcgaattcgcattatatcgatgtactatatctatttgaatgaatgaat 50002874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 52555564 - 52555456
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||||  || ||||||||||||   ||| ||||||||| | ||||| ||||||||   || |  |||||||    
T  52555564 aatatagtcatatgtgtaggcatttgtaccttgtacttttatgctattaac---atggatgttgtgagtctgttcacagattcatcctttttgtttttag 52555468  T
Q  123 cgaatttgcatt 134  Q
    ||||||||||||    
T  52555467 cgaatttgcatt 52555456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 31522363 - 31522403
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  31522363 attgtatcgatgtactctatcaatttgaatgaatgaatatc 31522403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 47466208 - 47466287
Alignment:
Q  24 atatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||||| | |||  || ||||||||| |||| ||||||||||||   ||| ||||||||| ||||||| ||||||||    
T  47466208 atatagtcatatttgtaggtttatgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattca 47466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 50274444 - 50274388
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| |||||  |||||||| ||||||||||| ||||||||| ||| ||||||    
T  50274444 tttttagctaatttatattgtatcaatgtactttattaatttaaatgaataaatatc 50274388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 56236535 - 56236495
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  56236535 attgtatcgatgtactctatcaatttgaatgaatgaatatc 56236495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 33177430 - 33177277
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||| ||||| ||||||   ||| ||||||||| ||||||||||||||||   || |     
T  33177430 gagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgcaattaac---atggatgttgtgagtttgttcgcagattcatccttttt 33177334  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||||| ||||||||||||||||||||||| ||| ||||| ||| |||||||||    
T  33177333 gtttttagcaaatttgcattgtatcgatgtactctattaatttgaatgaatgaatat 33177277  T

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Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 13969469 - 13969318
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    ||||||||||||| |||||||||| ||||||||||||| |||| |||| |||||||   ||| ||||||||| ||||||||||||||||   || |  ||    
T  13969469 acttgaatatagtaatatgtataggcttttgtactttgccgttttatgttattaac---atggatgttgtgagtttgttcgcagattcatcctttttgtt 13969373  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||| |||||||||||||||||||||||| | ||||||||| ||| ||||||||||    
T  13969372 ttttgcgaatttgcattgtatcgatgtattctatcaatttgaatgaatgaatatc 13969318  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 26771388 - 26771542
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |   |||||||| ||||||||   |||||   || |     
T  26771388 gagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggt---tgttgtgagtttgttcgttaattcatctttttt 26771484  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||| ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  26771485 gtttttagtgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 26771542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 22031934 - 22031780
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||| |||| ||||||    ||||||| ||||| |||||| | |||||||   ||||     
T  22031934 gagacttgaatataatcatatgtgtagacttttgtactttgtcgttttatgatattaa---tatgaatgatgtgaatttgtttgaagattcatccttatt 22031838  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||||||| ||||||| |||||||| ||||||||| ||| ||||||||||    
T  22031837 atttttagtgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatc 22031780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 8893579 - 8893728
Alignment:
Q  20 ttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttt 119  Q
    |||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||||||    ||||| ||| |||||||  |||||||   || |  ||||    
T  8893579 ttgaatatagtcatatgtgtaggcttttgtactctgttgttttatgctattaacatgg---atgttatgagtttgttcctagattcatcctttttgtttt 8893675  T
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  8893676 tagcgaatttgcattgtatcgatgtactctatcaatttgaatgaatgaatatc 8893728  T

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Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 15276280 - 15276124
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    ||||||||| | ||||| ||||||||   ||     
T  15276280 cagagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatgg---atgttgtgagtctgttcacagattcatccttt 15276184  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  15276183 ttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 15276124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 34566971 - 34567114
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || | ||||||||    
T  34566971 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttatttttag 34567067  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  34567068 cgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 34567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 12147880 - 12147726
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| | ||||||||||||| ||| |||| ||||||||||||| ||||||| |||||||    ||| ||||| ||||||| ||||||||    | |     
T  12147880 gagacttaagtatagtcatatgtgtaggctttagtactttgtcgttttatgctactaacatgg---atgatgtgagtttgttcacagattcatccctttt 12147784  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| |||||||||||| |||| ||||||||| ||| ||||||||||    
T  12147783 atttttagcgaattttcattgtatcgatatactctatcaatttgaatgaatgaatatc 12147726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 44513834 - 44513680
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||  ||| |||| ||||||||||    ||||||||| |||||||  |||||||   || |     
T  44513834 gagacttaaatatagtcatatgtgtaggctttagtactttgctgttttatgttattaacatgg---atgttgtgagtttgttcaaagattcatccttttt 44513738  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||    
T  44513737 gtttttagcgaattttcattgtatcgatgtactctaccaatttaaatgaatgaatatc 44513680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 34659472 - 34659319
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||||||||||||||| || ||| ||||| ||||||| | || |||||||||||||||    ||||||||| |||| ||||| |||||   ||        
T  34659472 agacttgaatatagtcataagtgtaggcttttttactttgccattttatgctattaacatgg---atgttgtgagtttgctcgcaaattcatcctttatg 34659376  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  34659375 tttttagcaaatttgcattgtatcgatgtactctatcaatttgaatgaatgaatatc 34659319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 46589428 - 46589584
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| |||||| |||||||| ||| |||| ||||||||||||| |||| ||||||||||    ||| ||||| ||||||| || |||||    |     
T  46589428 cagagacttaaatatactcatatgtgtagactttagtactttgtcgttttatgttattaacatgg---atgatgtgagtttgttcacatattcatccctt 46589524  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||    
T  46589525 ttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaatatc 46589584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 29067333 - 29067468
Alignment:
Q  19 cttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcattt 118  Q
    |||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||   ||| ||| |||||  ||||||||||||| |  ||| |  |||    
T  29067333 cttgaaaatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaac---atggatgctgtgaaattgttcgcagatttatcatttttgttt 29067429  T
Q  119 ttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||||||||||||| ||| |||||||| |||| ||||    
T  29067430 ttagcgaatttgcattttattgatgtactctatctattt 29067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 10877627 - 10877783
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat-gatgaatgttgtgactttgttcgcagattcaaaatt 111  Q
    |||||| |||||| ||||||||||| ||| |||||||||||||||||| |||||||||| ||| ||||||    |||| |||||||||||||  |   ||    
T  10877627 cagagaattgaatgtagtcatatgtgtaggcttttgtactttgtcgttttatgctattagcatcgatgaa----gtgagtttgttcgcagatgtatcctt 10877722  T
Q  112 atcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |  ||||||||||||||||||| ||| ||| |||| ||||||||| |||||| |||||||    
T  10877723 tttgtttttagcgaatttgcattatattgatatactctatcaatttgaataaacgaatatc 10877783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 2350912 - 2351056
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||||||||||||| |||| ||||||||||||   ||| ||||||||| ||||||| || |||||  ||| |  |||||||    
T  2350912 aatatagtcatatttgtaggcttttgtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacatattcatcatt-ttgtttttag 2351007  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||| |||| ||||||||||| ||||||||| ||| || ||||||    
T  2351008 cgaatttgtattgcatcgatgtactctatcaatttgaatgaacgaatat 2351056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 47392416 - 47392570
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| || | |||||||   ||| ||||||||| ||||||||| |||| |   ||     
T  47392416 cagagacttgaatatagtcatatgtgtatgcttttgtactttgtcgttttacgttattaac---atggatgttgtgagtttgttcgctgatttatctttt 47392512  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |   |||||||||||||||||||||| ||||| || |||  |||| ||||||||||||||    
T  47392513 ttgcttttagcgaatttgcattgtattgatgtgctctat--atttgaataaatgaatatc 47392570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 36621631 - 36621786
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || |||||| |||||||| ||| | ||||||||||| | || |||||||||||||||    |||||||||  |||||| || |||||   ||     
T  36621631 cagagatttaaatataatcatatgtgtaggcatttgtactttgccattttatgctattaacatgg---atgttgtgagcttgttcacatattcattcttt 36621727  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    | |||||||||||||||||||| |||||||||||| | ||||||| ||| |||||||||    
T  36621728 ttatttttagcgaatttgcattatatcgatgtactctgtcaatttgaatgaatgaatat 36621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 630608 - 630462
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |  | |||||||||||||||    |||||| || | ||||| ||||||||  ||| |  |||||||    
T  630608 aatatagtcatatgtgtagacatttgtaccttgccactttatgctattaacatgg---atgttgcgagtctgttcacagattcatcatttttgtttttag 630512  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  630511 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 38644618 - 38644476
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga 125  Q
    |||||||||||| ||| | ||||||||||| |||| |||||||||||||||    |||||||||  |||||| || |||||   || |  |||||||| |    
T  38644618 atagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcttgttcacatattcatccttttagtttttagcaa 38644522  T
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  38644521 atttgcattatattgatgtactctatcaatttaaatgaatgaatat 38644476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 33703344 - 33703188
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| ||||||||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||  ||||| ||||||| ||||||||   ||     
T  33703344 cagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaac---atggatactgtgagtttgttcacagattcatccttt 33703248  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||  | |||  |||||||||||||||| ||||||||||||  ||||||||||    
T  33703247 ttgtttttagaaattttttattgtatcgatgtactctatcaatttaaacgaatgaatatc 33703188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 28213433 - 28213489
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  28213433 tttttagcgaatttgcattatatcaatgtactttatcaatttgaataaatgaatatc 28213489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 12967557 - 12967411
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    |||||||||   ||||| |||||| |  ||| |  |||||||    
T  12967557 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagatttatcatttttgtttttag 12967461  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||||| | |||||||||||| ||||||||| ||| ||||||||||    
T  12967460 caaatttgcactatatcgatgtactctatcaatttgaatgaatgaatatc 12967411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 38646874 - 38647020
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| | || |||||||||||||||    |||||||||   ||||| ||| ||||   || |  |||||||    
T  38646874 aatatagtcatatgtgtagacatttgtactttgcctttttatgctattaacatgg---atgttgtgagcctgttcacagtttcatcctttttgtttttag 38646970  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||| |||||||| ||||||||| ||| ||||||||||    
T  38646971 cgaatttgcattatattgatgtactctatcaatttgaatgaatgaatatc 38647020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 49652125 - 49652271
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| |||  ||| ||||||||||||||| |   ||||||||  |||||| ||||| ||   || |  |||||||    
T  49652125 aatatagtcatatgtgtaggcatttgtaccttgctgttttatgctattaacatggt---tgttgtgagcttgttcacagatccatcctttttgtttttag 49652221  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  49652222 caaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 49652271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 37662648 - 37662773
Alignment:
Q  25 tatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcg 124  Q
    ||||||||||| | ||| |||  |||||||||| || ||||||||||||   ||||||||||||| ||||||| ||||||||   ||    |||||||||    
T  37662648 tatagtcatatttgtaggcttacgtactttgtcattttatgctattaac---atgaatgttgtgagtttgttcacagattcagtttt----tttttagcg 37662740  T
Q  125 aatttgcattgtatcgatgtactttatcaattt 157  Q
    |||||| |||| ||||||||||| |||||||||    
T  37662741 aatttgtattgcatcgatgtactctatcaattt 37662773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 171302 - 171362
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat 75  Q
    |||||||||||||| |||||| | ||| |||||||||||||||||| ||||||||||||||    
T  171302 gagacttgaatataatcatatatgtaggcttttgtactttgtcgttttatgctattaacat 171362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 5844511 - 5844567
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  5844511 tttttagcgaatttgcattatatcgatgtactctatcaatttgaattaatgaatatc 5844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 15790988 - 15790940
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  15790988 gaatttgtattgtatcgatgtactttatcaatttgaataaatgaatatc 15790940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 23257468 - 23257524
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||    
T  23257468 tttttagcgaatttgcattatatcgatgtactctatcaatttaaatgaataaatatc 23257524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 30853677 - 30853625
Alignment:
Q  120 tagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  30853677 tagcgaatttgcattgtatcgatgtattatatcaatttgaataaatgaatatc 30853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 52839822 - 52839965
Alignment:
Q  25 tatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcg 124  Q
    ||||||| ||||| ||| |||| |||||||| |||| |||||||||||||||    ||||||||| ||||||  | ||||||   || | | |||||| |    
T  52839822 tatagtcgtatgtgtaggctttagtactttgccgttttatgctattaacatgg---atgttgtgagtttgtttacggattcatcctttttacttttagtg 52839918  T
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| ||||||||||||||||| ||| ||||| ||| |||||||||    
T  52839919 aattttcattgtatcgatgtactctattaatttgaatgaatgaatat 52839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 900431 - 900486
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||| |||||||||    
T  900431 tttttagcgaatttacattgtatcgatgtactctatcaatttgaatgaatgaatat 900486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 14717010 - 14716955
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||    
T  14717010 tttttagcgaatttgcattatatctatgtactttatcaatttgaatgaatgaatat 14716955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 18343900 - 18344054
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | |  |||| ||| |||| ||||||||||||| |    ||| ||||| ||||||| ||||||||   || |     
T  18343900 gagacttgaatatagtcatatttgtaggcatgggtaccttgccgttttatgctattaacaggg---atgatgtgagtttgttcacagattcatccttttt 18343996  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||| |||||| ||||||||||| |||| ||||||||| ||||||| ||||||    
T  18343997 gtttttagcaaatttgtattgtatcgatatactctatcaatttgaataaataaatatc 18344054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 26199862 - 26200016
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| ||||  |||||||| ||| ||||||||||||   ||| ||||||||| ||| ||| ||  || |   || |     
T  26199862 gagacttaaatatagtcatatgtgtaggctttaatactttgttgttttatgctattaac---atggatgttgtgagtttattcacatgttaattcttttt 26199958  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||| |||||| ||||||  ||||||||||||||||||| ||| ||||||||||    
T  26199959 gtttttagtgaattttcattgtggcgatgtactttatcaatttgaatgaatgaatatc 26200016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 28677964 - 28677803
Alignment:
Q  14 agagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattat 113  Q
    |||||| | ||||||||||||| | ||| | |  |||||||  |||| |||||||||||||||    ||||||||| ||||||||||||||||   || |    
T  28677964 agagacataaatatagtcatatttgtaggcataggtacttttccgttttatgctattaacatgg---atgttgtgagtttgttcgcagattcatcctttt 28677868  T
Q  114 catttttagcgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
      ||||||||||||||| |||      ||||||||||||| ||||||||| ||||||||||||||    
T  28677867 tgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaataaatgaatatc 28677803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 44562573 - 44562427
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||  ||| |||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  ||||||     
T  44562573 aatatagtcatatgtgtaggcatttgtatcttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatcctttttgtttttat 44562477  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| | | ||||||||||    
T  44562476 cgaatttgcattatatcgatgtactctatcaatttgactgaatgaatatc 44562427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 13691597 - 13691456
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||| | ||| ||| |||| |||| |||| ||||||||||||   ||| ||||||||| |||||||  |||||||   ||     
T  13691597 cagagattttaatatagtcatatttgtaggcttatgtattttgccgttttatgctattaac---atggatgttgtgagtttgttcatagattcatccttt 13691501  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |  |||||||| |||||| |||| ||||||||||| |||||||||    
T  13691500 ttgtttttagcaaatttgtattgcatcgatgtactctatcaattt 13691456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 45659306 - 45659450
Alignment:
Q  25 tatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcg 124  Q
    ||||||||||||| ||| | |||||||||||  ||| ||| |||||||||||    |||||||||   ||||| ||||||||    | |  ||||||||     
T  45659306 tatagtcatatgtgtaggcatttgtactttggtgttttatactattaacatgg---atgttgtgagcctgttcacagattcatcccttttgtttttagca 45659402  T
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||| |||||||||||| |||| |||||||| ||||||||||    
T  45659403 aatttgcattatatcgatgtactctatcgatttaaatgaatgaatatc 45659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 15698578 - 15698634
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  15698578 tttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 15698634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 22344646 - 22344590
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  22344646 tttttaacgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 22344590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 11121266 - 11121412
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||| |||||||||| ||| | |  ||||||||||||| ||| |||||||||||    || |||||| ||||||| || |||||   || |  |||||||    
T  11121266 aatacagtcatatgtgtaggcctgagtactttgtcgttttatactattaacatgg---atattgtgagtttgttcacaaattcatcctttttgtttttag 11121362  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||| || ||||||||||||||| | ||||||||| ||| ||||||||||    
T  11121363 cgaactttcattgtatcgatgtattctatcaatttgaatgaatgaatatc 11121412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 32538937 - 32538888
Alignment:
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||| |||||    
T  32538937 tttagtgaatttacattgtatcgatgtactctatcaatttaaatgaatga 32538888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 13999351 - 13999399
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||| ||||||| ||||||| |||||||||||||||||||||    
T  13999351 gaatttgtattctatcgatatactttaccaatttaaataaatgaatatc 13999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 25032815 - 25032767
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  25032815 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 25032767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 40992588 - 40992719
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||| |||||||| ||| | |||||||||||||||| ||| ||||||||   ||| || ||||||   ||||| ||||||||   || |  |||||||    
T  40992588 aatataatcatatgtgtaggcatttgtactttgtcgttttatactattaac---atggatattgtgagcctgttcacagattcatcctttttgtttttag 40992684  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||| |||| |||| ||||||| |||||||||    
T  40992685 cgaatttacattatatcaatgtactctatcaattt 40992719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 51418393 - 51418441
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||| |||||||||||| ||||||||||||| ||||||||||    
T  51418393 gaatttgtattatatcgatgtactctatcaatttaaatgaatgaatatc 51418441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 32784488 - 32784535
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  32784488 gaatttgtattgtatcgatgtactctatcaatttgaattaatgaatat 32784535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 4882087 - 4882041
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  4882087 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 4882041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13488246 - 13488200
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  13488246 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 13488200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 29205597 - 29205725
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcg 140  Q
    ||||||||| |||| |||||||||||||||    ||||||||| ||| ||| ||||||||   || |  ||||||||||||||| |||      ||||||    
T  29205597 tgtactttgccgttttatgctattaacatgg---atgttgtgagtttattcacagattcatcctttttgtttttagcgaatttggatttttattgtatcg 29205693  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||| ||| ||||||||||    
T  29205694 atgtactctatcaatttgaatgaatgaatatc 29205725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32878993 - 32879051
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    |||||||||||||||||| | ||| | |  ||||||||||||| |||||||||||||||    
T  32878993 acttgaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatg 32879051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 33486746 - 33486700
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  33486746 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 33486700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 40488285 - 40488219
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatg 79  Q
    |||||||||||||||||| ||| |  ||| ||||||||||||||  || |||| |||||||||||||    
T  40488285 cagagacttgaatatagttatacgcgtaggcttttgtactttgttattttatgttattaacatgatg 40488219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 44517559 - 44517605
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  44517559 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 44517605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 9298255 - 9298167
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||||||| |||||| ||||| | |  |||||||||| || ||| ||||||||   ||| ||||||||| ||| ||||||||||||    
T  9298255 gagacttgaatataatcatatttataggcataggtactttgtcattttatactattaac---atggatgttgtgagtttattcgcagattca 9298167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 12871903 - 12871964
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||  | ||| | | |||||||||||||| ||||||| |||||||    
T  12871903 gagacttgaatatagtcatacttgtaggcatatgtactttgtcgttttatgctaataacatg 12871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 21326763 - 21326816
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||| ||| |||| |||||||||||||||    
T  21326763 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaacatg 21326816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 28399168 - 28399107
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||| | ||  | | ||||||||| |||| |||||||||||||||    
T  28399168 gagacttgaatatagtcatatttgtaagcatatgtactttgccgttttatgctattaacatg 28399107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 33938754 - 33938709
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||||||    
T  33938754 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 33938709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 8758062 - 8758098
Alignment:
Q  136 tatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  8758062 tatcgatgtactctatcaatttaaatgaatgaatatc 8758098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 10599166 - 10599218
Alignment:
Q  20 ttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaa 72  Q
    |||||||||||||||| | |||   | ||||||||||||||||||||||||||    
T  10599166 ttgaatatagtcatatttgtagatatatgtactttgtcgttctatgctattaa 10599218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 28399068 - 28399024
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaa 168  Q
    ||||||| ||||||||||| ||||  |||||||||||||||||||    
T  28399068 gaatttgaattgtatcgatatactccatcaatttaaataaatgaa 28399024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 46918681 - 46918834
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||   ||| ||| ||||| ||||||||||||||||   || |     
T  46918681 gagacttgaatatagtcatatgtataggcttttgtactttgccgttttatgctattaac---atgtatgctgtgagtttgttcgcagattcatccttttt 46918777  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
     |||||| |||||||||||||||||||| |||| | | ||||| ||| |||||||||    
T  46918778 gtttttatcgaatttgcattgtatcgatatactctgttaatttgaatgaatgaatat 46918834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 772736 - 772879
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga 125  Q
    |||||||||||| ||| |||||||||||||||||| ||| |||||||||||    || ||||||  ||||||||| |||||   || |  ||||||||||    
T  772736 atagtcatatgtgtaggcttttgtactttgtcgttttatactattaacatgg---atattgtgagcttgttcgcatattcatcctttttgtttttagcga 772832  T
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  772833 atttgcattgtatcgatgtactctatcaatttaaatgaatgaatatc 772879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 35362939 - 35362786
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||| |||||||| ||||||||||||||| | |||| | |||||||||||||    || |||||| ||| ||||||||||||   || |     
T  35362939 gagacttgaatataatcatatgtgtagccttttgtacttagccgtttt-tgctattaacatgg---attttgtgagtttattcgcagattcatccttttt 35362844  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  35362843 gtttttagcgaatttgcattgtatcgatatactctatcaatttaaatgaatgaatatc 35362786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 35141494 - 35141341
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    |||||||||||||||||||| | ||  |||||||| ||||| ||| |||  ||||||||||    ||||||||| ||||||||||||||||   || | |    
T  35141494 agacttgaatatagtcatatatgtatgcttttgtattttgttgttttatattattaacatgg---atgttgtgagtttgttcgcagattcatccttttta 35141398  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  35141397 ttttaagcgaatttgcattgtatcgatgtactctatcagtttaaatgaatgaatatc 35141341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 35135031 - 35134880
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| |||| |||||  |||    ||||||||| ||||||||||||||||  ||| | ||    
T  35135031 gacttgaatatagtcatatgtgtaaacttttgtactttgtcgttttatgttattagtatgg---atgttgtgagtttgttcgcagattcatcatttt-at 35134936  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| |||||||||||||||||||||||| |||  |||| ||| ||||||||||    
T  35134935 ttttagtgaatttgcattgtatcgatgtactatattgatttgaatgaatgaatatc 35134880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 34893397 - 34893543
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||    || |||||| ||||||| ||||||||   |||  ||||||||    
T  34893397 aatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatgg---atattgtgagtttgttcacagattcatccttaatatttttag 34893493  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||| ||||||||||| ||||||||| ||| ||||||||||    
T  34893494 cgaattttcattgcatcgatgtactctatcaatttgaatgaatgaatatc 34893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 18753985 - 18754131
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| ||||||||||||   ||||||||||||| | |||||   ||||||   || |  |||||||    
T  18753985 aatatagtcatatgtgtagacatttgtactttgtcgttttatgctattaac---atgaatgttgtgagtctgttcaatgattcatcctttttgtttttag 18754081  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  18754082 cgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 18754131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 28015647 - 28015793
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||| |||||||| ||| |||| |||||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  |||||||    
T  28015647 aatatattcatatgtgtaggctttagtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttag 28015743  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  28015744 cgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 28015793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 29804503 - 29804360
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||| |||| |||||||||||||||    |||| |||| ||||||| ||||||||  ||| |  |||||||    
T  29804503 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatgg---atgtcgtgagtttgttcacagattcatcatttttgtttttag 29804407  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| ||| |||||||||||| ||||||||| ||| |||||||    
T  29804406 cgaatttgtattatatcgatgtactctatcaatttgaatgaatgaat 29804360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 38649190 - 38649036
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||  |||| |||||||| |||| | |||||||||||||    ||||||||| |||||||||| |||||   || |     
T  38649190 gagacttaaatatagtcatatgtgtaagctttagtactttgccgttttttgctattaacatgg---atgttgtgagtttgttcgcatattcatccttttt 38649094  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||| ||||||||||||||||| ||  ||||| ||| ||||||||||    
T  38649093 gtttttagcgaattttcattgtatcgatgtactctactaatttgaatgaatgaatatc 38649036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 21329122 - 21328979
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| || |||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  |||||||    
T  21329122 aatatagtcatatttgtaggcttgtgcactttgccgttttatgctattaacatgg---atgttgtgaatttgttcacagattcatcctttttgtttttag 21329026  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  21329025 cgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 21328979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 23732227 - 23732072
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaaca-tgatgaatgttgtgactttgttcgcagattcaaaatt 111  Q
    |||| ||||||||||| |||||||| ||  |||||||||||||||||| ||||||||||| | |||||     ||||| ||||||||||||||||   ||    
T  23732227 cagatacttgaatataatcatatgtgtatgcttttgtactttgtcgttttatgctattaaaattgatg-----tgtgagtttgttcgcagattcatcctt 23732133  T
Q  112 atcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |  || ||  ||||||| |||| |||| ||||||||||||||||||||| ||||||||||    
T  23732132 tttgttcttgacgaatttacattatatcaatgtactttatcaatttaaatgaatgaatatc 23732072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 24470694 - 24470841
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc-attttta 121  Q
    |||||||||||||||  || | ||||||||||| |||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  |||||||    
T  24470694 aatatagtcatatgtgaaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatccttttttattttta 24470790  T
Q  122 gcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  24470791 gcgaatttgcattatatcgatgtactctttcaatttaaatgaatgaatatc 24470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 24475642 - 24475789
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc-attttta 121  Q
    |||||||||||||||  || | ||||||||||| |||| |||||||||||||||    |||||||||   ||||| ||||||||   || |  |||||||    
T  24475642 aatatagtcatatgtgaaggcatttgtactttgccgttttatgctattaacatgg---atgttgtgagcctgttcacagattcatccttttttattttta 24475738  T
Q  122 gcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  24475739 gcgaatttgcattatatcgatgtactctttcaatttaaatgaatgaatatc 24475789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 41748359 - 41748220
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||||| |||||| |||  ||| |||||||| |||| |||||||||||||||    ||| ||||| ||||||| |||||| |   || ||    
T  41748359 gagacttaaatatagttatatgtgtaggttttagtactttgccgttttatgctattaacatgg---atgatgtgagtttgttcacagatttatccttttc 41748263  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     |||||||||||||| ||||||||||||||||| |||||||||    
T  41748262 gtttttagcgaattttcattgtatcgatgtactatatcaattt 41748220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 43483878 - 43484009
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| ||||  |||||||||||| ||||||||||||   ||| ||| ||||| ||||||| ||||||||   || || |||||||    
T  43483878 aatatagtcatatgtgtaggctttaatactttgtcgttttatgctattaac---atggatgatgtgagtttgttcacagattcatctttttcgtttttag 43483974  T
Q  123 cgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||| |||||||| |||| ||| |||||||||    
T  43483975 cgaattttcattgtatagatgaactatatcaattt 43484009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 47156675 - 47156821
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| |||| |||||||   ||| ||||||||| | ||||| || |||||   || |  |||||||    
T  47156675 aatatagtcatatgtgtagacatttgtactttgtcgttttatgttattaac---atggatgttgtgagtctgttcacaaattcattctttttgtttttag 47156771  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | | ||||| ||| ||||||||||    
T  47156772 cgaatttgcattatatcgatgtactcttttaatttgaatgaatgaatatc 47156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 5024888 - 5024759
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||||||| |||| ||| |||| ||| |||||||||  ||||||||||||||    ||||||||| ||||||| ||||||||  ||| |     
T  5024888 gagacttaaatatagtcaaatgtgtaggctttagtattttgtcgtttcatgctattaacatgg---atgttgtgagtttgttcacagattcatcattttt 5024792  T
Q  115 atttttagcgaatttgcattgtatcgatgtact 147  Q
     |||||||| ||||| |||||||||||||||||    
T  5024791 gtttttagcaaattttcattgtatcgatgtact 5024759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 11002133 - 11002278
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| | || ||||||||||||||||   |||||||||   |||||  |||||||   || | ||||||||    
T  11002133 aatatagtcatatgtgtaggcatttgtactttgccattttatgctattaacatga---atgttgtgagcctgttcatagattcatcctttttatttttag 11002229  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| | | ||||| ||| |||||||||    
T  11002230 cgaatttgcattatatcgatgtactcttttaatttgaatgaatgaatat 11002278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 43806974 - 43806829
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||  | ||||||  ||| |||| ||| |||||||||||    |||||||||   ||||| ||||||||  ||| |  |||||||    
T  43806974 aatatagtcatatgtgtaagcatttgtatcttgccgttttatactattaacatgg---atgttgtgatcctgttcacagattcatcattcttgtttttag 43806878  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  43806877 cgaatttgcattatatcgatgtactctatcaatttaaatgaatgaatat 43806829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 47750024 - 47750167
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| ||||||||| | ||||| || |||||   ||    |||||||    
T  47750024 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgttgtgagtctgttcacatattcatccttgatgtttttag 47750120  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||| |||| |||||||||||| ||||||||| ||| |||||||    
T  47750121 cgaatttacattatatcgatgtactctatcaatttgaatgaatgaat 47750167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 26017482 - 26017336
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||| ||| |||| ||||||||||||   ||| ||||||||| | ||||| ||||||||   || |  |||||||    
T  26017482 aatatagtcatatgtgtaggcatttgtaccttgccgttttatgctattaac---atggatgttgtgagtctgttcacagattcatcctttttgtttttag 26017386  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||  ||| |||||||||||| ||||||||| ||| ||||||||||    
T  26017385 tgaatttatattatatcgatgtactctatcaatttgaatgaatgaatatc 26017336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 22379543 - 22379402
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||||||||||||||||||||||  ||  |||| ||||||| |||| ||||||||||||||| |   ||||||||  ||||||  |||||||   ||     
T  22379543 cagagacttgaatatagtcatatgtgcaggtttttttactttgccgttttatgctattaacatggt---tgttgtgagattgttcttagattcatctttt 22379447  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    |  ||||||  |||||| ||||| |||||||||||||||||||||    
T  22379446 ttgtttttaaagaatttacattgcatcgatgtactttatcaattt 22379402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 37399888 - 37400033
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| ||||||||||||   ||  ||||||||| | ||||| || ||| |   || |  |||||||    
T  37399888 aatatagtcatatgtgtagacatttgtactttgtcgttttatgctattaac---atagatgttgtgagtctgttcacaaatttagcttttttgtttttag 37399984  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||| ||||||| |||| ||||||||| ||| |||||||||    
T  37399985 cgaatttacattatatcgatatactctatcaatttgaatgaatgaatat 37400033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 37890321 - 37890168
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||||||||  |||||||| ||| ||||||||||||  |||| |||| | | ||||||    ||| ||||| |||||||||| |||||   |  |      
T  37890321 agacttgaatatgatcatatgtctagacttttgtacttttccgttttatgttgtcaacatgg---atgatgtgagtttgttcgcaaattcatcttatttg 37890225  T
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  37890224 tttttaacgaatttgcattgtatcgatgtactatatcaatttgaatgaatgaatatc 37890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 39090367 - 39090524
Alignment:
Q  12 acagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatt 111  Q
    |||| ||||| ||||||||||||||| ||| |||| |||||||| | || |||| ||||||||||    || ||||||  |||||| || |||||  |||    
T  39090367 acagtgacttaaatatagtcatatgtgtaggctttagtactttgccattttatgatattaacatgg---atattgtgaggttgttcacatattcatcatt 39090463  T
Q  112 atcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |  |||||||||||||| | ||||||| | ||||||||||||||| ||| ||||||||||    
T  39090464 tttgtttttagcgaattttccttgtatcaacgtactttatcaatttgaatgaatgaatatc 39090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 46025879 - 46025719
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||| ||||||||||||||| | ||| | | |||||||||||||| |||||||||||||||    ||| ||||| |||||||  |||||||   || |     
T  46025879 gagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatgg---atgctgtgagtttgttcaaagattcatccttttt 46025783  T
Q  115 atttttagcgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||| |||      ||||||||||||||||||||||| ||| ||||||||||    
T  46025782 gtttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 46025719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 8319695 - 8319751
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  8319695 tttttagcgaatttgcactatatcgatgtactctatcaatttaaatgaatgaatatc 8319751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 30992558 - 30992502
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  30992558 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 30992502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 7986182 - 7986328
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||| || || ||| | |||||||||||||||| ||||||||||||   ||| |||||||||   ||||| ||||||||   || |  |||||||    
T  7986182 aatatagtcctaagtgtagacatttgtactttgtcgttttatgctattaac---atggatgttgtgagcctgttcacagattcatcttttttgtttttag 7986278  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||| ||| ||||||| |||| ||||||||| ||| ||||||||||    
T  7986279 caaatttgtattatatcgatctactctatcaatttgaatgaatgaatatc 7986328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 33530307 - 33530153
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||||||||||| || |||  ||||||| |||| |||  |||| ||||||||||    ||| ||||| ||||||| ||||||||    | |     
T  33530307 gagacttgaatatagtcataagtgtaggtttttgtattttgccgtgttatgttattaacatgg---atgctgtgagtttgttcacagattcatctctttt 33530211  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||| ||||||||| ||||||| ||||||||| ||| |||| |||||    
T  33530210 gtttttagcgaatttacattgtatcaatgtactctatcaatttgaatgaatgcatatc 33530153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 44681740 - 44681830
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||| || |||||||||| | ||| |||||||||||||||||| || |||||||||   ||| ||||||||  ||||||||||||||||    
T  44681740 cagagacttaaaaatagtcatatatgtagacttttgtactttgtcgttttaagctattaac---atggatgttgtgcgtttgttcgcagattca 44681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 49167215 - 49167361
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | ||||||||||| |||| ||||||||||||   ||| ||| |||||   ||||| ||||||||   || |  |||||||    
T  49167215 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaac---atggatgatgtgagcctgttcacagattcatcctttttgtttttag 49167311  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||| ||| |||| | ||||||| ||| ||||||||||    
T  49167312 cgaatttgcattatattgatatactctttcaatttgaatgaatgaatatc 49167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 16273760 - 16273817
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  16273760 atttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatc 16273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 40775557 - 40775700
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    |||||||||   ||||| || |||||   || |   ||||||    
T  40775557 aatatagtcatatgtgtagacaattgtactttgccgttttatgctattaacatgg---atgttgtgagcatgttcacatattcatcctttt---ttttag 40775650  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| |||||||||  || ||||||||||    
T  40775651 cgaatttgcattatatcgatgtactctatcaatttggatgaatgaatatc 40775700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 5684650 - 5684713
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||| ||||||||||||||| ||||| | | ||||||||| |||| |||||||||||||||    
T  5684650 cagagacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaacatg 5684713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 5709700 - 5709763
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||| ||||||||||||||| ||||| | | ||||||||| |||| |||||||||||||||    
T  5709700 cagagacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaacatg 5709763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 19895418 - 19895363
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||| |||||||||    
T  19895418 tttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaatat 19895363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 42491082 - 42491137
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||    
T  42491082 tttttagcgaatttgcattatgtcgatgtactctatcaatttgaatgaatgaatat 42491137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 11833425 - 11833475
Alignment:
Q  122 gcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  11833425 gcgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 11833475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 17508996 - 17508868
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaattt------gcattgtatcg 140  Q
    ||||||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||      | |||||||||    
T  17508996 tgtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcg 17508900  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||  ||||||||||    
T  17508899 atgtactctatcaatttaaaagaatgaatatc 17508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 17544218 - 17544346
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaattt------gcattgtatcg 140  Q
    ||||||||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||      | |||||||||    
T  17544218 tgtactttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcg 17544314  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||  ||||||||||    
T  17544315 atgtactctatcaatttaaaagaatgaatatc 17544346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 24319933 - 24319887
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24319933 atttgtattgtatcgatgtactctatcaatttaaatgaatgaatatc 24319887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32312849 - 32312911
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    ||||||||||||||||||||| |  || ||| |||| ||||||||| ||||||||||||||||    
T  32312849 gagacttgaatatagtcatatttggaggcttatgtagtttgtcgttttatgctattaacatga 32312911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 32944163 - 32944248
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    ||||||||||| |||||||| ||| ||||||||||||||| || | ||| ||||||   || |||||||||| |||||||| |||||||    
T  32944163 acttgaatataatcatatgtgtagacttttgtactttgtcattttgtgccattaac---ataaatgttgtgaatttgttcgtagattca 32944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 48304102 - 48304056
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  48304102 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 48304056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 4621195 - 4621044
Alignment:
Q  24 atatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagc 123  Q
    |||||||||||| | ||| | | ||||||||||| || ||||||||||||||||   ||||||||| ||||||  ||||||||   || |  |||||| |    
T  4621195 atatagtcatatttgtaggcatatgtactttgtcattttatgctattaacatga---atgttgtgagtttgttaacagattcatcctttttgtttttaac 4621099  T
Q  124 gaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||      ||||||||||||| ||||||||| ||| ||||||||||    
T  4621098 gaatttggatttgaattgtatcgatgtactctatcaatttgaatgaatgaatatc 4621044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 15123840 - 15123681
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttg------tgactttgttcgcagattcaaaa 109  Q
    |||||||||||||||||||||| |||  |||||||||||  || | |||| |||||||   ||| ||||||      ||| |||||||||| |||||  |    
T  15123840 agacttgaatatagtcatatgtgtaggtttttgtacttttccgctttatgatattaac---atggatgttgcaagtctgagtttgttcgcaaattcatca 15123744  T
Q  110 ttatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    || |  |||||||| ||||||| |||||| ||| |||| ||||||||| ||| ||||||||||    
T  15123743 tttttgtttttagcaaatttgctttgtattgatctactctatcaatttgaatgaatgaatatc 15123681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 36350449 - 36350510
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||| || |||||| |||  |||||||||||||| || |||||||||||||||    
T  36350449 gagacttgaatatggttatatgtgtaggtttttgtactttgtcattttatgctattaacatg 36350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 37375879 - 37375818
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||| ||||||||||||||| | ||| | | |||||||||||||| |||||||||||||||    
T  37375879 gagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatg 37375818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 43098860 - 43098921
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    |||| ||||||||||||||| ||||| |||||||  ||||||||| |||| |||||||||||    
T  43098860 agacatgaatatagtcatatttatagacttttgtgttttgtcgttttatgttattaacatga 43098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 134879 - 134823
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||| ||||| |||| |||||||||||| ||||||||| ||| ||||||||||    
T  134879 tttttagcaaatttacattatatcgatgtactctatcaatttgaatgaatgaatatc 134823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 22751684 - 22751767
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcag 101  Q
    |||| |||||||||||||||||| ||| ||||||||||||  |||| |||| |||||||||     ||||||||| |||||||||||    
T  22751684 gagaattgaatatagtcatatgtgtaggcttttgtactttaccgttttatgttattaacatag---atgttgtgaatttgttcgcag 22751767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 32741038 - 32741200
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||| | ||||||||||||| | ||| | | | |||||||| ||| |||||||||||||||    ||||||||| ||||||| ||||||||   ||     
T  32741038 cagagacataaatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatccttt 32741134  T
Q  113 tcatttttagcgaattt------gcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  ||||||| ||||||      | ||||||||||| |||| ||||||||| ||||||||||||||    
T  32741135 ttgtttttagtgaatttagatttgtattgtatcgatatactctatcaatttgaataaatgaatatc 32741200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 3266783 - 3266830
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||| |||||||| ||||||||||||||||| ||| |||||||||    
T  3266783 gaatttgtattgtatcaatgtactttatcaatttgaatgaatgaatat 3266830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 8611458 - 8611395
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    |||||| || ||||||||||||||| |||   ||||||||||| |||| |||||||||||||||    
T  8611458 cagagatttaaatatagtcatatgtgtaggtatttgtactttgccgttttatgctattaacatg 8611395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 1280847 - 1280801
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| ||| |||||||||||| ||||||||| ||||||||||||||    
T  1280847 atttgtattatatcgatgtactctatcaatttgaataaatgaatatc 1280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 21991073 - 21991119
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  21991073 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 21991119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 27535838 - 27535884
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||||||| ||| ||||||    
T  27535838 atttgtattgtatcgatgtactctatcaatttaaatgaataaatatc 27535884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 42644984 - 42645112
Alignment:
Q  47 tgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaattt------gcattgtatcg 140  Q
    |||| |||| |||| |||||||||||||||    ||||||||| ||||||| ||||||||   || |  ||||||||||||||      | |||||||||    
T  42644984 tgtaatttgccgttttatgctattaacatgg---atgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagacttgtattgtatcg 42645080  T
Q  141 atgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||| ||| ||||||||||    
T  42645081 atgtactctatcaatttgaatgaatgaatatc 42645112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 3266674 - 3266735
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||| ||||||||||||| | ||| | |  ||||||||||||| |||||||||||||||    
T  3266674 gagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatg 3266735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 8611354 - 8611301
Alignment:
Q  119 ttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  8611354 ttagcgtatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 8611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 25854944 - 25854890
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||| ||||  ||||||||||| ||||||||| ||| ||||||||||    
T  25854944 tttttagcgaatttacatt--atcgatgtactctatcaatttgaatgaatgaatatc 25854890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 6667804 - 6667852
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||||| || ||||||||| ||| ||||||||||    
T  6667804 gaatttgtattgtatcgatgtgctctatcaatttgaatgaatgaatatc 6667852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 15017165 - 15017117
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||| ||||||||||| ||| ||| ||||||    
T  15017165 gaatttgtattgtatcgatgtattttatcaatttgaatcaataaatatc 15017117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 28664668 - 28664620
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||||| | ||||||||| |||| ||| |||||    
T  28664668 gaatttgcattgtatcgatgtaatctatcaatttgaatagatggatatc 28664620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 31254843 - 31254795
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||| | ||||||||| ||| ||||||||||    
T  31254843 gaatttgtattgtatcgatgtaatctatcaatttgaatgaatgaatatc 31254795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 32312917 - 32312957
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  32312917 attgtatcgatgtactctatcaatttgaatgaatgaatatc 32312957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 34871198 - 34871158
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| |||||||||  |||||||||||||    
T  34871198 attgtatcgatgtactctatcaatttgtataaatgaatatc 34871158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 41288365 - 41288413
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| ||| || |||||||    
T  41288365 gaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatc 41288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 18472558 - 18472404
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||  |||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||    ||| ||||| ||||||| ||||||||  ||| |     
T  18472558 gagacttacatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatgg---atgatgtgagtttgttcacagattcatcattttt 18472462  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||| || ||||||||||||||||| || |||||| ||||||||||||||    
T  18472461 gtttttagcgaactttcattgtatcgatgtactctaccaatttgaataaatgaatatc 18472404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 6647745 - 6647608
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| ||||||||||||  |||| || ||||||||||||    ||||||||| ||| ||||||||||||  ||| |     
T  6647745 gagactttaatatagtcatatgtgtaggcttttgtacttttccgttttaagctattaacatgg---atgttgtgagtttattcgcagattcatcattttt 6647649  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaat 155  Q
     |||||||||||||||||||||||||||||| | |||||||    
T  6647648 gtttttagcgaatttgcattgtatcgatgtattctatcaat 6647608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 20270996 - 20271151
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca-aaattat 113  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||| ||||||||||||   ||| ||||||||| ||||||| ||||||||    || |    
T  20270996 gagacttaaatatagtcatatgtgtagactttagtactttgtcgttttatgctattaac---atggatgttgtgagtttgttcacagattcattcttttt 20271092  T
Q  114 catttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
      |||||||||||||| ||||||||||||||||| ||  ||||| ||| ||||||||||    
T  20271093 tgtttttagcgaattttcattgtatcgatgtactctactaatttgaatgaatgaatatc 20271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 34866713 - 34866868
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattat- 113  Q
    ||||||||||||| | ||||||| ||||||||||||||||| |||| | ||||||||||   ||| ||||||||| |||||||||| |||||   || |     
T  34866713 gagacttgaatatggccatatgtgtagccttttgtactttgacgttttttgctattaac---atggatgttgtgagtttgttcgcatattcatctttttg 34866809  T
Q  114 catttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
      ||||||||||||||||||||||| |||| ||| ||||||||| ||| ||||||||||    
T  34866810 tttttttagcgaatttgcattgtattgatgcactatatcaatttgaatgaatgaatatc 34866868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 41554769 - 41554923
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||||||||| ||||||| |||||| |   || |     
T  41554769 gagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagatttatccttttt 41554865  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     |||||||||||||| ||||||||||||||||| || |||||| ||| |||| |||||    
T  41554866 gtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatggatatc 41554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 34844200 - 34844352
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcat 116  Q
    ||||| ||||||||||||||| ||| |||| |||||||| |||| ||| |||||||||||    ||||||||| ||||||| || |||||  ||| |  |    
T  34844200 gacttaaatatagtcatatgtgtaggctttagtactttgccgttttatactattaacatgg---atgttgtgagtttgttcacatattcatcatttttgt 34844296  T
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| |||||||| |||||||| |||||||||  || ||||||||||    
T  34844297 ttttagcgaattttcattgtatagatgtactctatcaatttgcattaatgaatatc 34844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 8811984 - 8811845
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||||||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||| ||||| ||||||| || |||||  ||| ||    
T  8811984 gagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaac---atggatgatgtgagtttgttcacaaattcatcattttc 8811888  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
     ||||||||||| || ||||||||| ||||||| |||||||||    
T  8811887 gtttttagcgaactttcattgtatcaatgtactctatcaattt 8811845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 28500971 - 28501110
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||| ||||||||||||||| | |||   |||||||||||||||| | |||||||||||||    ||||||||| ||||||||||| ||||   || |     
T  28500971 gagacatgaatatagtcatatctgtaggtgtttgtactttgtcgttttttgctattaacatgg---atgttgtgagtttgttcgcaggttcatccttttt 28501067  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||    
T  28501068 attttcagcgaatttacattgtatcgatgtactctatcaattt 28501110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 6887002 - 6886856
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    ||| |||||   ||||| || |||||  ||| |  |||||||    
T  6887002 aatatagtcatatgtgtaggcaattgtactttgccgttttatgctattaacatgg---atgatgtgagcctgttcacatattcatcatttttgtttttag 6886906  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  6886905 cgaatttgcattatatcgatgtactctatcaatttaaatgaatgaatatc 6886856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 33486401 - 33486247
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| ||||| ||||||||| ||| |||| |||||||| |||| |||||||||||| ||    ||||||||| ||||||| ||||||||  ||| |     
T  33486401 gagacttaaatatggtcatatgtgtaggctttagtactttgccgttttatgctattaacgtgg---atgttgtgagtttgttcacagattcatcattttt 33486305  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||  ||| |||||||||| | ||||||||| ||| ||||||||||    
T  33486304 gtttttagcgaatttttattttatcgatgtattctatcaatttgaatgaatgaatatc 33486247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 15710837 - 15710980
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga 125  Q
    |||||||||||  ||| |||||||||||||| ||| ||||||||||||   ||| ||||||||| |||||||||| |||||   || |   |||||| ||    
T  15710837 atagtcatatgcgtagtcttttgtactttgttgttttatgctattaac---atggatgttgtgagtttgttcgcatattcatcctttttggttttagtga 15710933  T
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||| |||||| | ||||||||| ||| ||||||||||    
T  15710934 atttgcattgtattgatgtattctatcaatttgaatgaatgaatatc 15710980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 32387744 - 32387899
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||| |||||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||    ||| ||||||||| |||||||||| ||| |   ||     
T  32387744 cagatacttgaatatagtcatatgtgtaggcttttgtaccttgtcgttttatgttattaa---tatggatgttgtgagtttgttcgcaaatttatctttt 32387840  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |  || ||| |||||||||| |||||||||||||| ||| ||||| ||| |||||||||    
T  32387841 ttgttgttaacgaatttgcagtgtatcgatgtactctattaatttgaatgaatgaatat 32387899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 11734669 - 11734509
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||||||||||||||||| | ||| | | ||||||||| |||| ||||||||||||||| |   |||||||| ||||||| || |||||   || |     
T  11734669 gagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggt---tgttgtgagtttgttcacatattcatccttttt 11734573  T
Q  115 atttttagcgaatttgcatt------gtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||| |||      ||||||||||||||||||||||| ||| ||||||||||    
T  11734572 gtttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 11734509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 41358309 - 41358470
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga--tgaatgttgtgactttgttcgcagattcaaaat 110  Q
    |||| |||| ||||||||||||||| ||| |||||||||||||  |||  ||||||||||||| |  |  ||||||||| |||||||||| |||||        
T  41358309 cagatactttaatatagtcatatgtttagacttttgtactttgcggtttaatgctattaacatcaaattgatgttgtgagtttgttcgcatattcatccg 41358408  T
Q  111 tatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |  |||||| ||||||| |||| |||||||||||| ||||||||| ||| ||||||||||    
T  41358409 ttttgtttttaacgaatttacattatatcgatgtactctatcaatttgaatgaatgaatatc 41358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 25770889 - 25771046
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatca 115  Q
    ||||||||||| | |||||| | ||| ||| ||||||||||| || ||| |||||||   ||||||  |||||| ||||||||||||| || |  | | |    
T  25770889 agacttgaatacaatcatatttgtaggcttatgtactttgtcattttattctattaa---gatgaacattgtgagtttgttcgcagatccatacctttta 25770985  T
Q  116 tttttagcgaatttgcattgtatc----gatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||| ||||||||    |||||||| ||||||||| ||||||||||||||    
T  25770986 tttttagcgaatttgtattgtatcaatcgatgtactctatcaatttgaataaatgaatatc 25771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 40564981 - 40564838
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| |||||||||||||| ||||||||||||   ||  ||||||||| ||||||| || |||||   || |  |||||||    
T  40564981 aatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaac---atagatgttgtgagtttgttcacaaattcatcttttttgtttttag 40564885  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    | |||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  40564884 caaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 40564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 40775046 - 40775197
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    |||| ||||||||||||||| ||| |||| ||||||||||||| ||||||||||||   ||  ||  | ||| ||||||| ||  ||||   || | |||    
T  40775046 acttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaac---atagatcctctgagtttgttcacatgttcatccttttaatt 40775142  T
Q  118 tttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||| ||||||||||||||||| ||||||||| ||| ||||||||||    
T  40775143 tttagcaaattttcattgtatcgatgtactctatcaatttgaatgaatgaatatc 40775197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 10923958 - 10923812
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||||||||   ||  | |||||||   ||||| ||||||||   || | |||||||     
T  10923958 aatatagtcatatgtataggcatttgtactttgtcgttttatgctattaac---atagacgttgtgagcctgttcacagattcatcctttttatttttaa 10923862  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | | |||||||| ||| |||||||| ||||||||| ||| ||||||||||    
T  10923861 caattttgcattatattgatgtactctatcaatttgaatgaatgaatatc 10923812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 28618892 - 28619038
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| | |||||||||||||||| ||||||||||||   ||| ||| |||||   ||||  || |||||   || |  |||||||    
T  28618892 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaac---atggatgatgtgagcctgttgacatattcatcctttttgtttttag 28618988  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  28618989 cgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 28619038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 31646119 - 31646265
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||||||| |||| |||||||||||||||    ||| |||||   ||||| || |||||   || |  |||||||    
T  31646119 aatatagtcatatgtgtaggcaattgtactttgccgttttatgctattaacatgg---atgatgtgagcctgttcacatattcatcctttttgtttttag 31646215  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  31646216 cgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 31646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 35906559 - 35906705
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  ||||| ||||||||| |||||||||||||||    ||| |||||   ||||| || ||||| | || |  |||||||    
T  35906559 aatatagtcatatgtgtaggcaattgtattttgtcgttttatgctattaacatgg---atgatgtgagcctgttcacatattcatacttttagtttttag 35906655  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| ||| |||||||| ||||||||| ||| ||||||||||    
T  35906656 cgaatttgcattatattgatgtactctatcaatttgaatgaatgaatatc 35906705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 37219298 - 37219435
Alignment:
Q  28 agtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaat 127  Q
    |||||||||| ||| |||| |||||||| |||| ||||||||||||   ||| ||||||||| ||||||| ||||||||   || |   |||||||||||    
T  37219298 agtcatatgtgtaggctttagtactttgccgttttatgctattaac---atggatgttgtgagtttgttcacagattcatcctt-tttgttttagcgaat 37219393  T
Q  128 ttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    || ||||||||| ||||||| ||||||||| ||| |||||||    
T  37219394 tttcattgtatcaatgtactctatcaatttgaatgaatgaat 37219435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 19645874 - 19645715
Alignment:
Q  15 gagacttgaatatagtcatatgtata------gccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaa 108  Q
    |||| |||||||||||||||||||||      | | |||||| ||||||||| |||||||||||||||    ||||||||| | ||||| ||||||||      
T  19645874 gagatttgaatatagtcatatgtatatacgtaggcatttgtattttgtcgttttatgctattaacatgg---atgttgtgagtctgttcacagattcatc 19645778  T
Q  109 attatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     || |  ||||||||||||||||||| ||||||||||| ||||| |||| ||| ||||||||||    
T  19645777 ctttttgtttttagcgaatttgcattatatcgatgtac-ttatcgatttgaatgaatgaatatc 19645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 39591328 - 39591473
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    ||||||||| |||||| |||||| | ||| ||| |||| ||||||||| |||| ||||||||||    ||||| ||| |||||||||||||||||  ||     
T  39591328 cagagactttaatatattcatatatgtaggcttatgtattttgtcgttttatgttattaacatgg---atgttatgagtttgttcgcagattcaaccttt 39591424  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaat 161  Q
    | |||||||   |||||| ||||||| || ||||| |||||||||||||    
T  39591425 ttatttttaataaatttgtattgtattgaggtactctatcaatttaaat 39591473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 3495139 - 3495267
Alignment:
Q  26 atagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcga 125  Q
    |||||||||||| ||  | ||||||||||| |||| ||||||||||||||| |   ||||||||   ||||| || |||||  ||| |  ||||||||||    
T  3495139 atagtcatatgtgtaagcatttgtactttgccgttttatgctattaacatggt---tgttgtgagcctgttcacatattcatcatttttgtttttagcga 3495235  T
Q  126 atttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||||| |||||||||||| |||||||||    
T  3495236 atttgcattatatcgatgtactctatcaattt 3495267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 9034766 - 9034623
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||||| |||||| ||| | |||||||||||||||| ||||| |||||||||    |||||||||   ||||| ||||| ||   || |   ||||||    
T  9034766 aatatagttatatgtgtagacatttgtactttgtcgttttatgccattaacatgg---atgttgtgagcctgttcacagatccaccgtttt---ttttag 9034673  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  9034672 cgaatttgcattgtatcgatgtactctatcaatttgaatgaatggatatc 9034623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 20146043 - 20145902
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||| | ||| ||| ||||||||||| || ||||||||||||||  || ||||||||| ||||||| || |||||   ||||  |||||||    
T  20146043 aatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacat--tg-atgttgtgagtttgttcacatattcattcttattgtttttag 20145947  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatga 167  Q
    |||||||| |||| ||||||  ||| ||||||||| ||| |||||    
T  20145946 cgaatttgtattgcatcgatacactctatcaatttgaatgaatga 20145902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 39308554 - 39308431
Alignment:
Q  44 ttttgtactttgtcgttctatgctattaacat-gatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgat 142  Q
    ||||||| |||| |||| ||||||||||| || |||||    ||||| ||||||||||||||||  ||  |  ||||||||||||||||||| |||||||    
T  39308554 ttttgtattttgccgttttatgctattaatatagatga----tgtgagtttgttcgcagattcatcatctt--tttttagcgaatttgcattatatcgat 39308461  T
Q  143 gtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||| || ||| ||||||||||    
T  39308460 gtactttatcaaattgaatgaatgaatatc 39308431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 12524496 - 12524345
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||| |||||| | ||| ||||||||||||||| || ||||||||||||   ||||||||||||| ||||||| || |||||   |        
T  12524496 gagactttaatataatcatatttgtaggcttttgtactttgtcattttatgctattaac---atgaatgttgtgagtttgttcacatattcatcctctct 12524400  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    |||||||||||||||| ||||| |  || || | ||||||||||||| |||||||    
T  12524399 atttttagcgaatttgtattgtttgaatataatctatcaatttaaatgaatgaat 12524345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 5378683 - 5378738
Alignment:
Q  117 ttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||    
T  5378683 ttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaatatc 5378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 29154510 - 29154656
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||| || ||||| |||  ||||||||||||||||| ||||||||||||   ||| ||| ||||| | |||||||| |||||  ||| |  |||||||    
T  29154510 aatataatcgtatgtgtaggtttttgtactttgtcgttttatgctattaac---atggatgatgtgagtatgttcgcatattcatcatttttgtttttag 29154606  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||  |||||||  || |||| ||||||||| ||||||||||||||    
T  29154607 agaatttatattgtattaatatactctatcaatttgaataaatgaatatc 29154656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 2415701 - 2415837
Alignment:
Q  32 atatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgc 131  Q
    |||||| ||| | ||| |||||||||||| |||||||||||||||    ||||||||| | ||||| || |||||   || | |||||||| ||||||||    
T  2415701 atatgtgtaggcatttatactttgtcgttttatgctattaacatgg---atgttgtgagtctgttcacaaattcatcctttttatttttagtgaatttgc 2415797  T
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    |||  |||||| |||| ||||||||| ||| |||||||||    
T  2415798 attacatcgatatactctatcaatttgaatgaatgaatat 2415837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 4070929 - 4070986
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||||||| |||||||||||| | ||||||| ||| ||||||||||    
T  4070929 atttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatc 4070986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 29310088 - 29310035
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||    
T  29310088 tttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaatgaat 29310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 4726737 - 4726681
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||| ||||||||||    
T  4726737 tttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaatatc 4726681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 17218103 - 17218159
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||  |||||||||||||||| ||||||||| ||| ||||||||||    
T  17218103 tttttagcgaatttttattgtatcgatgtactctatcaatttgaatgaatgaatatc 17218159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 28423770 - 28423714
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||| ||||||||||    
T  28423770 tttttagcgaatttgcattatatcaatgtactatatcaatttgaatgaatgaatatc 28423714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 28662362 - 28662505
Alignment:
Q  25 tatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcg 124  Q
    ||||||||||||| ||| |||| ||| |||| |||| |||||||||||||||    ||||| ||  |||||||  ||| |||  ||| |  |||||||||    
T  28662362 tatagtcatatgtgtaggctttagtattttgccgttttatgctattaacatgg---atgttatgtgtttgttcatagactcatcatttttgtttttagcg 28662458  T
Q  125 aatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||| ||||||||||| ||||| | ||||||| ||| |||||||||    
T  28662459 aattttcattgtatcgacgtactctttcaatttgaatgaatgaatat 28662505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 32390496 - 32390373
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    |||||||||||| |   |||||| |||  ||||||||||||||||| |||||||||||||||    ||  ||||| ||||||||||||||||   || |     
T  32390496 gagacttgaatacaactatatgtgtaggtttttgtactttgtcgttttatgctattaacatgg---atactgtgagtttgttcgcagattcatccttttt 32390400  T
Q  115 atttttagcgaatttgcattgtatcga 141  Q
    |||||||| ||||||||||| ||||||    
T  32390399 atttttagtgaatttgcattatatcga 32390373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 25962204 - 25962361
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatt 117  Q
    |||||||||||||||||| | ||| | |   |||||||||||| ||||||||||||   ||||||||||||| ||| |||||||||| |   || | |||    
T  25962204 acttgaatatagtcatatttgtaggcatagatactttgtcgttttatgctattaac---atgaatgttgtgagtttcttcgcagatttatcctttttatt 25962300  T
Q  118 tttagcga------atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||      ||||  ||| |||||||||||||||||||||| ||| |||| |||||    
T  25962301 tttagcgattttggatttaaattttatcgatgtactttatcaatttgaatgaatggatatc 25962361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 34874230 - 34874285
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatat 171  Q
    ||||||||||||||||||||||| |||| ||| ||| ||||||||| |||||||||    
T  34874230 tttttagcgaatttgcattgtattgatgcactctattaatttaaatgaatgaatat 34874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 17325496 - 17325342
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaatta 112  Q
    |||||| || ||||||||||||| | ||| ||| ||||||||||| || ||||||||||||   ||| ||||  ||| ||||||  ||||||||   ||     
T  17325496 cagagattttaatatagtcatatatgtaggcttatgtactttgtcattttatgctattaac---atggatgt--tgagtttgtttacagattcatctttt 17325402  T
Q  113 tcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |  |||||||| |||||| |||| ||||||||| | ||||||||| ||| ||||||||||    
T  17325401 ttgtttttagcaaatttgtattgcatcgatgtaatctatcaatttgaatgaatgaatatc 17325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 39179555 - 39179509
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  39179555 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 39179509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 14910508 - 14910354
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatc 114  Q
    ||||||| |||||||| |||||| |||  ||| ||| |||| |||| |||||||||||||||    ||| | ||| ||| ||| ||||||||   || |     
T  14910508 gagacttaaatatagttatatgtgtaggttttagtattttgccgttttatgctattaacatgg---atgctatgagttttttcacagattcatccttttt 14910412  T
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
     ||||||||||||||  ||||||||| |||||| || |||||| ||| ||||||||||    
T  14910411 gtttttagcgaatttttattgtatcgttgtactctaacaatttgaatgaatgaatatc 14910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 17331739 - 17331785
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  17331739 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 17331785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 23881826 - 23881780
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  23881826 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 23881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 34431475 - 34431521
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  34431475 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 34431521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 6074470 - 6074417
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||||||||||| |||| ||||||||||| ||||||| | ||| |||||||    
T  6074470 tttttagcgaatttgtattgcatcgatgtactctatcaatgtgaatgaatgaat 6074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 17095953 - 17095908
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||| |||||||||||||||| ||||||||| ||| |||||||    
T  17095953 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaat 17095908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 28388940 - 28388883
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaa 72  Q
    |||||||||||||| |||||||| ||| |||||||| ||||| ||| |||| ||||||    
T  28388940 gagacttgaatataatcatatgtgtagacttttgtattttgttgttttatgttattaa 28388883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 29098077 - 29098138
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||||||||| | ||| | | ||||| ||| |||| |||||||||||||||    
T  29098077 gagacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatgctattaacatg 29098138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 6281453 - 6281501
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| ||||||||||| |||| ||||||||| ||| ||||||||||    
T  6281453 gaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatc 6281501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 7151094 - 7151154
Alignment:
Q  16 agacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    |||||||||||||||||| | | |||  || |||||||||||||| |||| ||||||||||    
T  7151094 agacttgaatatagtcatgtttgtaggtttatgtactttgtcgttttatgttattaacatg 7151154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 12439480 - 12439401
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttg 130  Q
    ||||||||||||| ||||||||||||   ||| ||| ||||| ||||||| |||||| |  ||| | ||||||||||||||||    
T  12439480 gtactttgtcgttttatgctattaac---atggatgatgtgagtttgttcacagatttatcatttttatttttagcgaatttg 12439401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 15710149 - 15710085
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    |||||||||||||||||| || | | ||| |||||||||||| | ||| |||| |||||||||||    
T  15710149 cagagacttgaatatagttatgtttgtaggcttttgtactttatagttttatgttattaacatga 15710085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 39531112 - 39531072
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  39531112 attgtatcgatgtactctatcaatttgaatgaatgaatatc 39531072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 42781410 - 42781458
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||| ||| ||||||||| ||||||| ||||||    
T  42781410 gaatttgtattgtatcgatgcactctatcaatttgaataaataaatatc 42781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 937 - 856
Alignment:
Q  91 tttgttcgcagattcaaaattatcatttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||||||||   || | ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  937 tttgttcgcagattcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaatttgaataaatgaatatc 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 1059 - 1117
Alignment:
Q  17 gacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacat 75  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  1059 gacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacat 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 2169 - 2112
Alignment:
Q  115 atttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  2169 atttttagcgaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatc 2112  T

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Target: scaffold0056 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 172
Target Start/End: Original strand, 74494 - 74621
Alignment:
Q  48 gtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttagcgaatttgcatt------gtatcga 141  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||||| ||||||||   || |  ||||||||||||||| |||      |||||||    
T  74494 gtactttgccgttttatgctattaacatgg---atgttgtgactttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcga 74590  T
Q  142 tgtactttatcaatttaaataaatgaatatc 172  Q
    |||||| ||||||||||||||||||||||||    
T  74591 tgtactctatcaatttaaataaatgaatatc 74621  T

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Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 91233 - 91174
Alignment:
Q  18 acttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatga 77  Q
    |||||||||| ||||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  91233 acttgaatatggtcatatatgtaggcttttgtactttgtcgttcaatgctattaacatga 91174  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 12027 - 11893
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    |||||||||| |||  ||| | ||||||||||||| || |||||||||||||||    ||| |||||   ||||| ||||||||   || |  |||||||    
T  12027 aatatagtcacatgcgtaggcatttgtactttgtcattttatgctattaacatgg---atgatgtgagcatgttcacagattcatcctttttgtttttag 11931  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaa 160  Q
    ||||||||||||  ||||||||||| ||||||||||||    
T  11930 cgaatttgcattacatcgatgtactctatcaatttaaa 11893  T

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Target: scaffold0722 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 5350 - 5204
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattcaaaattatcatttttag 122  Q
    ||||||||||||||| ||| |  |||||| ||| |||| |||||||||||||  ||| |||||||||   ||||| ||||||||   || |  |||||||    
T  5350 aatatagtcatatgtgtaggcacttgtaccttgccgttttatgctattaaca--atggatgttgtgagcctgttcacagattcacctttttg-tttttag 5254  T
Q  123 cgaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    | |||||| ||| |||||||||||| ||| ||||| ||| ||||||||||    
T  5253 caaatttgtattatatcgatgtactctataaatttgaatgaatgaatatc 5204  T

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Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 10161 - 10073
Alignment:
Q  15 gagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatgatgaatgttgtgactttgttcgcagattca 106  Q
    |||||||||| |||||||||||| |||  ||||||||||||   || ||||||||||||   ||| ||||||||| |||||||||| |||||    
T  10161 gagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaac---atggatgttgtgagtttgttcgcaaattca 10073  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 9482 - 9429
Alignment:
Q  23 aatatagtcatatgtatagccttttgtactttgtcgttctatgctattaacatg 76  Q
    ||||||||||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  9482 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatg 9429  T

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Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 48085 - 48044
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaattt 157  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  48085 tttttagcgaatttgcattatatcgatgtactatatcaattt 48044  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 105426 - 105479
Alignment:
Q  116 tttttagcgaatttgcattgtatcgatgtactttatcaatttaaataaatgaat 169  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| ||| |||||||    
T  105426 tttttagcgaatttgtattgcatcgatgtactatatcaatttgaatgaatgaat 105479  T

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Target: scaffold1379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 907 - 789
Alignment:
Q  13 cagagacttgaatatagtcatatgtatagccttttgtactttgtcgttctatgctattaaca-tgatgaatgttgtgactttgttcgcagattcaaaatt 111  Q
    ||||||||||||||||||||||| | ||| | |  ||| |||| |||| |||| ||||||||  |||| ||||||||| ||||||| ||| ||||  |||    
T  907 cagagacttgaatatagtcatatttgtagacataagtattttgccgttttatgttattaacacagatgcatgttgtgagtttgttcacagtttcatcatt 808  T
Q  112 atcatttttagcgaatttg 130  Q
     |  |||||||||||||||    
T  807 cttgtttttagcgaatttg 789  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 3777 - 3731
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  3777 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 3731  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 35486 - 35532
Alignment:
Q  126 atttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||| |||||||||||||||| ||||||||| ||| ||||||||||    
T  35486 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatc 35532  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 6842 - 6793
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaattt-aaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||||    
T  6842 gaatttgtattgtatcgatgtactctatcaatttgaaatgaatgaatatc 6793  T

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Target: scaffold0536 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 3312 - 3352
Alignment:
Q  132 attgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    |||||||||||||||| ||||||||| ||| ||||||||||    
T  3312 attgtatcgatgtactctatcaatttgaatgaatgaatatc 3352  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 245017 - 245065
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||||||| ||||| |||||| ||||||||| ||| ||||||||||    
T  245017 gaatttgcattatatcgttgtactatatcaatttgaatgaatgaatatc 245065  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 403960 - 403912
Alignment:
Q  124 gaatttgcattgtatcgatgtactttatcaatttaaataaatgaatatc 172  Q
    ||||||| |||||||||||||||| ||| ||||| ||| ||||||||||    
T  403960 gaatttgtattgtatcgatgtactctattaatttgaatgaatgaatatc 403912  T

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