View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5088_high_25 (Length: 245)
Name: NF5088_high_25
Description: NF5088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5088_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 35628754 - 35628977
Alignment:
| Q |
1 |
cataaccacaaactcctttcataaaaattggaaactatagacatttagatttaattccacatacgtagcacaacataaagcagtcaccaactaactttat |
100 |
Q |
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||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
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| T |
35628754 |
cataaccacaaactcctttaataaaaattggaaactatagaaatttagatttaattccacatacatagcacagcataaagcagtcaccaactaactttat |
35628853 |
T |
|
| Q |
101 |
accattagatgtgcatctcatataccacaataagcattgatcctagatgcagattttagagctttttctgtgagatagagtcatatgtaactgtatcaac |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |
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| T |
35628854 |
accattagatgtgcacctcatataccacaataagcattgatcctagatgcagattttagagctttttctgtgagat--agtcatatataactctatcaac |
35628951 |
T |
|
| Q |
201 |
cttatcataaagtgcaaggaatccac |
226 |
Q |
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||||||||||| |||||||||||||| |
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| T |
35628952 |
cttatcataaactgcaaggaatccac |
35628977 |
T |
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