View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5090_low_11 (Length: 245)
Name: NF5090_low_11
Description: NF5090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5090_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4071679 - 4071457
Alignment:
| Q |
1 |
cctattataactagtatatagaaggtgttcatttatataagatttaattgtagtattttgctctcttatacaatgtacatattggaagcttaatttacat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4071679 |
cctattataactagtatatagaaggtgttcatttatataagatttaattgtagtattttgctctcttatacaatgtacatattggaagcttaatttacat |
4071580 |
T |
|
| Q |
101 |
gcattttaatccagagtttaaagaaaaaataattaatatctgtaatgtaaacgttgcttcccaactaagccagccatatcgtgatgtggtgggtttgtta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4071579 |
gcattttaatccagagtttaaagaaaaaataattaatatctgtaatgtaaacgttgcttcccaactaagccagccatatcgtgatgtggtgggtttgtta |
4071480 |
T |
|
| Q |
201 |
tagaaatggaggatatacatact |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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| T |
4071479 |
tagaaatggaggatatacatact |
4071457 |
T |
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